I: pbuilder: network access will be disabled during build I: Current time: Thu Sep 2 03:39:28 -12 2021 I: pbuilder-time-stamp: 1630597169 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [gatb-core_1.4.1+git20181225.44d5a44+dfsg-3.dsc] I: copying [./gatb-core_1.4.1+git20181225.44d5a44+dfsg.orig.tar.xz] I: copying [./gatb-core_1.4.1+git20181225.44d5a44+dfsg-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Tue Jun 18 22:58:34 2019 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./gatb-core_1.4.1+git20181225.44d5a44+dfsg-3.dsc dpkg-source: info: extracting gatb-core in gatb-core-1.4.1+git20181225.44d5a44+dfsg dpkg-source: info: unpacking gatb-core_1.4.1+git20181225.44d5a44+dfsg.orig.tar.xz dpkg-source: info: unpacking gatb-core_1.4.1+git20181225.44d5a44+dfsg-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_hdf5.patch dpkg-source: info: applying fix_hdf5_includes.patch dpkg-source: info: applying dynamic_lib.patch dpkg-source: info: applying fix_install_location.patch dpkg-source: info: applying set_soversion.patch dpkg-source: info: applying dynamic_linking_of_tools.patch dpkg-source: info: applying multiarch.patch dpkg-source: info: applying spelling.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/32662/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3' DISTRIBUTION='' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='3236aee5b7f54df0a49d2f19c64933be' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='32662' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.puGDMkWZCQ/pbuilderrc_FoY4 --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.puGDMkWZCQ/b1 --logfile b1/build.log gatb-core_1.4.1+git20181225.44d5a44+dfsg-3.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:8000/' I: uname -a Linux virt32c 5.10.0-8-armmp-lpae #1 SMP Debian 5.10.46-4 (2021-08-03) armv7l GNU/Linux I: ls -l /bin total 3328 -rwxr-xr-x 1 root root 767656 Apr 17 2019 bash -rwxr-xr-x 3 root root 26052 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 26052 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 26052 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 9636 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 22432 Feb 28 2019 cat -rwxr-xr-x 1 root root 38868 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 38836 Feb 28 2019 chmod -rwxr-xr-x 1 root root 42972 Feb 28 2019 chown -rwxr-xr-x 1 root root 88376 Feb 28 2019 cp -rwxr-xr-x 1 root root 75516 Jan 17 2019 dash -rwxr-xr-x 1 root root 71648 Feb 28 2019 date -rwxr-xr-x 1 root root 51212 Feb 28 2019 dd -rwxr-xr-x 1 root root 55672 Feb 28 2019 df -rwxr-xr-x 1 root root 88444 Feb 28 2019 dir -rwxr-xr-x 1 root root 54872 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 22364 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 18260 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 47356 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 21980 Apr 22 2020 fusermount -rwxr-xr-x 1 root root 124508 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 64232 Jan 5 2019 gzip -rwxr-xr-x 1 root root 13784 Sep 26 2018 hostname -rwxr-xr-x 1 root root 43044 Feb 28 2019 ln -rwxr-xr-x 1 root root 34932 Jul 26 2018 login -rwxr-xr-x 1 root root 88444 Feb 28 2019 ls -rwxr-xr-x 1 root root 67036 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 47168 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 43040 Feb 28 2019 mknod -rwxr-xr-x 1 root root 26552 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 26024 Jan 9 2019 more -rwsr-xr-x 1 root root 34268 Jan 9 2019 mount -rwxr-xr-x 1 root root 9688 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 84284 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 22416 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 26504 Feb 28 2019 readlink -rwxr-xr-x 1 root root 42968 Feb 28 2019 rm -rwxr-xr-x 1 root root 26496 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 14136 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Aug 6 20:24 sh -> dash -rwxr-xr-x 1 root root 22384 Feb 28 2019 sleep -rwxr-xr-x 1 root root 51124 Feb 28 2019 stty -rwsr-xr-x 1 root root 42472 Jan 9 2019 su -rwxr-xr-x 1 root root 22392 Feb 28 2019 sync -rwxr-xr-x 1 root root 283324 Apr 23 2019 tar -rwxr-xr-x 1 root root 9808 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 63464 Feb 28 2019 touch -rwxr-xr-x 1 root root 18260 Feb 28 2019 true -rwxr-xr-x 1 root root 9636 Apr 22 2020 ulockmgr_server -rwsr-xr-x 1 root root 21976 Jan 9 2019 umount -rwxr-xr-x 1 root root 22380 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 88444 Feb 28 2019 vdir -rwxr-xr-x 1 root root 21980 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/32662/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 12~), d-shlibs, cmake, libcppunit-dev, libhdf5-dev, libboost-dev, libjsoncpp-dev, doxygen, graphviz dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 18932 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 12~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on d-shlibs; however: Package d-shlibs is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libcppunit-dev; however: Package libcppunit-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev; however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libjsoncpp-dev; however: Package libjsoncpp-dev is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on graphviz; however: Package graphviz is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} cmake{a} cmake-data{a} d-shlibs{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} gettext{a} gettext-base{a} graphviz{a} groff-base{a} hdf5-helpers{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libarchive13{a} libboost-dev{a} libboost1.67-dev{a} libbsd0{a} libcairo2{a} libcdt5{a} libcgraph6{a} libclang1-6.0{a} libcppunit-1.14-0{a} libcppunit-dev{a} libcroco3{a} libcurl4{a} libdatrie1{a} libedit2{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgd3{a} libgfortran5{a} libglib2.0-0{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgts-0.7-5{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libhdf5-103{a} libhdf5-cpp-103{a} libhdf5-dev{a} libice6{a} libicu63{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjsoncpp-dev{a} libjsoncpp1{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblab-gamut1{a} libldap-2.4-2{a} libldap-common{a} libllvm6.0{a} libltdl7{a} libmagic-mgc{a} libmagic1{a} libncurses6{a} libnghttp2-14{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpathplan4{a} libpipeline1{a} libpixman-1-0{a} libpng16-16{a} libprocps7{a} libpsl5{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libsm6{a} libssh2-1{a} libssl1.1{a} libsz2{a} libthai-data{a} libthai0{a} libtiff5{a} libtool{a} libuchardet0{a} libuv1{a} libwebp6{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxdot4{a} libxext6{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxt6{a} lsb-base{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} ucf{a} x11-common{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl fonts-liberation krb5-locales libarchive-cpio-perl libglib2.0-data libgpm2 libgts-bin libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix shared-mime-info wget xdg-user-dirs 0 packages upgraded, 128 newly installed, 0 to remove and 0 not upgraded. Need to get 73.6 MB of archives. After unpacking 332 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main armhf libbsd0 armhf 0.9.1-2+deb10u1 [104 kB] Get: 2 http://deb.debian.org/debian buster/main armhf bsdmainutils armhf 11.1.2+b1 [186 kB] Get: 3 http://deb.debian.org/debian buster/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB] Get: 4 http://deb.debian.org/debian buster/main armhf groff-base armhf 1.22.4-3+deb10u1 [828 kB] Get: 5 http://deb.debian.org/debian buster/main armhf libpipeline1 armhf 1.5.1-2 [26.8 kB] Get: 6 http://deb.debian.org/debian buster/main armhf man-db armhf 2.8.5-2 [1240 kB] Get: 7 http://deb.debian.org/debian buster/main armhf libncurses6 armhf 6.1+20181013-2+deb10u2 [79.8 kB] Get: 8 http://deb.debian.org/debian buster/main armhf libprocps7 armhf 2:3.3.15-2 [58.7 kB] Get: 9 http://deb.debian.org/debian buster/main armhf lsb-base all 10.2019051400 [28.4 kB] Get: 10 http://deb.debian.org/debian buster/main armhf procps armhf 2:3.3.15-2 [248 kB] Get: 11 http://deb.debian.org/debian buster/main armhf sensible-utils all 0.0.12 [15.8 kB] Get: 12 http://deb.debian.org/debian buster/main armhf libmagic-mgc armhf 1:5.35-4+deb10u2 [242 kB] Get: 13 http://deb.debian.org/debian buster/main armhf libmagic1 armhf 1:5.35-4+deb10u2 [110 kB] Get: 14 http://deb.debian.org/debian buster/main armhf file armhf 1:5.35-4+deb10u2 [65.6 kB] Get: 15 http://deb.debian.org/debian buster/main armhf gettext-base armhf 0.19.8.1-9 [118 kB] Get: 16 http://deb.debian.org/debian buster/main armhf ucf all 3.0038+nmu1 [69.0 kB] Get: 17 http://deb.debian.org/debian buster/main armhf libsigsegv2 armhf 2.12-2 [32.1 kB] Get: 18 http://deb.debian.org/debian buster/main armhf m4 armhf 1.4.18-2 [190 kB] Get: 19 http://deb.debian.org/debian buster/main armhf autoconf all 2.69-11 [341 kB] Get: 20 http://deb.debian.org/debian buster/main armhf autotools-dev all 20180224.1 [77.0 kB] Get: 21 http://deb.debian.org/debian buster/main armhf automake all 1:1.16.1-4 [771 kB] Get: 22 http://deb.debian.org/debian buster/main armhf autopoint all 0.19.8.1-9 [434 kB] Get: 23 http://deb.debian.org/debian buster/main armhf cmake-data all 3.13.4-1 [1476 kB] Get: 24 http://deb.debian.org/debian buster/main armhf libicu63 armhf 63.1-6+deb10u1 [8005 kB] Get: 25 http://deb.debian.org/debian buster/main armhf libxml2 armhf 2.9.4+dfsg1-7+deb10u2 [597 kB] Get: 26 http://deb.debian.org/debian buster/main armhf libarchive13 armhf 3.3.3-4+deb10u1 [277 kB] Get: 27 http://deb.debian.org/debian buster/main armhf libkeyutils1 armhf 1.6-6 [13.9 kB] Get: 28 http://deb.debian.org/debian buster/main armhf libkrb5support0 armhf 1.17-3+deb10u1 [62.3 kB] Get: 29 http://deb.debian.org/debian buster/main armhf libk5crypto3 armhf 1.17-3+deb10u1 [119 kB] Get: 30 http://deb.debian.org/debian buster/main armhf libssl1.1 armhf 1.1.1d-0+deb10u6 [1299 kB] Get: 31 http://deb.debian.org/debian buster/main armhf libkrb5-3 armhf 1.17-3+deb10u1 [323 kB] Get: 32 http://deb.debian.org/debian buster/main armhf libgssapi-krb5-2 armhf 1.17-3+deb10u1 [137 kB] Get: 33 http://deb.debian.org/debian buster/main armhf libsasl2-modules-db armhf 2.1.27+dfsg-1+deb10u1 [67.4 kB] Get: 34 http://deb.debian.org/debian buster/main armhf libsasl2-2 armhf 2.1.27+dfsg-1+deb10u1 [98.9 kB] Get: 35 http://deb.debian.org/debian buster/main armhf libldap-common all 2.4.47+dfsg-3+deb10u6 [90.0 kB] Get: 36 http://deb.debian.org/debian buster/main armhf libldap-2.4-2 armhf 2.4.47+dfsg-3+deb10u6 [202 kB] Get: 37 http://deb.debian.org/debian buster/main armhf libnghttp2-14 armhf 1.36.0-2+deb10u1 [74.4 kB] Get: 38 http://deb.debian.org/debian buster/main armhf libpsl5 armhf 0.20.2-2 [52.4 kB] Get: 39 http://deb.debian.org/debian buster/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2 [54.9 kB] Get: 40 http://deb.debian.org/debian buster/main armhf libssh2-1 armhf 1.8.0-2.1 [129 kB] Get: 41 http://deb.debian.org/debian buster/main armhf libcurl4 armhf 7.64.0-4+deb10u2 [298 kB] Get: 42 http://deb.debian.org/debian buster/main armhf libexpat1 armhf 2.2.6-2+deb10u1 [78.0 kB] Get: 43 http://deb.debian.org/debian buster/main armhf libjsoncpp1 armhf 1.7.4-3 [67.8 kB] Get: 44 http://deb.debian.org/debian buster/main armhf librhash0 armhf 1.3.8-1 [134 kB] Get: 45 http://deb.debian.org/debian buster/main armhf libuv1 armhf 1.24.1-1 [98.0 kB] Get: 46 http://deb.debian.org/debian buster/main armhf cmake armhf 3.13.4-1 [2848 kB] Get: 47 http://deb.debian.org/debian buster/main armhf d-shlibs all 0.84 [17.2 kB] Get: 48 http://deb.debian.org/debian buster/main armhf libtool all 2.4.6-9 [547 kB] Get: 49 http://deb.debian.org/debian buster/main armhf dh-autoreconf all 19 [16.9 kB] Get: 50 http://deb.debian.org/debian buster/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 51 http://deb.debian.org/debian buster/main armhf libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 52 http://deb.debian.org/debian buster/main armhf dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 53 http://deb.debian.org/debian buster/main armhf libelf1 armhf 0.176-1.1 [158 kB] Get: 54 http://deb.debian.org/debian buster/main armhf dwz armhf 0.12-3 [72.0 kB] Get: 55 http://deb.debian.org/debian buster/main armhf libglib2.0-0 armhf 2.58.3-2+deb10u3 [1102 kB] Get: 56 http://deb.debian.org/debian buster/main armhf libcroco3 armhf 0.6.12-3 [133 kB] Get: 57 http://deb.debian.org/debian buster/main armhf gettext armhf 0.19.8.1-9 [1242 kB] Get: 58 http://deb.debian.org/debian buster/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 59 http://deb.debian.org/debian buster/main armhf po-debconf all 1.0.21 [248 kB] Get: 60 http://deb.debian.org/debian buster/main armhf debhelper all 12.1.1 [1016 kB] Get: 61 http://deb.debian.org/debian buster/main armhf libedit2 armhf 3.1-20181209-1 [79.5 kB] Get: 62 http://deb.debian.org/debian buster/main armhf libllvm6.0 armhf 1:6.0.1-10 [13.1 MB] Get: 63 http://deb.debian.org/debian buster/main armhf libclang1-6.0 armhf 1:6.0.1-10 [6029 kB] Get: 64 http://deb.debian.org/debian buster/main armhf doxygen armhf 1.8.13-10 [3568 kB] Get: 65 http://deb.debian.org/debian buster/main armhf libpng16-16 armhf 1.6.36-6 [275 kB] Get: 66 http://deb.debian.org/debian buster/main armhf libfreetype6 armhf 2.9.1-3+deb10u2 [322 kB] Get: 67 http://deb.debian.org/debian buster/main armhf fonts-dejavu-core all 2.37-1 [1068 kB] Get: 68 http://deb.debian.org/debian buster/main armhf fontconfig-config all 2.13.1-2 [280 kB] Get: 69 http://deb.debian.org/debian buster/main armhf libfontconfig1 armhf 2.13.1-2 [328 kB] Get: 70 http://deb.debian.org/debian buster/main armhf fontconfig armhf 2.13.1-2 [404 kB] Get: 71 http://deb.debian.org/debian buster/main armhf libpixman-1-0 armhf 0.36.0-1 [465 kB] Get: 72 http://deb.debian.org/debian buster/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB] Get: 73 http://deb.debian.org/debian buster/main armhf libxdmcp6 armhf 1:1.1.2-3 [24.9 kB] Get: 74 http://deb.debian.org/debian buster/main armhf libxcb1 armhf 1.13.1-2 [132 kB] Get: 75 http://deb.debian.org/debian buster/main armhf libx11-data all 2:1.6.7-1+deb10u2 [299 kB] Get: 76 http://deb.debian.org/debian buster/main armhf libx11-6 armhf 2:1.6.7-1+deb10u2 [698 kB] Get: 77 http://deb.debian.org/debian buster/main armhf libxcb-render0 armhf 1.13.1-2 [108 kB] Get: 78 http://deb.debian.org/debian buster/main armhf libxcb-shm0 armhf 1.13.1-2 [99.0 kB] Get: 79 http://deb.debian.org/debian buster/main armhf libxext6 armhf 2:1.3.3-1+b2 [48.1 kB] Get: 80 http://deb.debian.org/debian buster/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB] Get: 81 http://deb.debian.org/debian buster/main armhf libcairo2 armhf 1.16.0-4+deb10u1 [615 kB] Get: 82 http://deb.debian.org/debian buster/main armhf libcdt5 armhf 2.40.1-6+deb10u1 [58.2 kB] Get: 83 http://deb.debian.org/debian buster/main armhf libcgraph6 armhf 2.40.1-6+deb10u1 [77.3 kB] Get: 84 http://deb.debian.org/debian buster/main armhf libjpeg62-turbo armhf 1:1.5.2-2+deb10u1 [113 kB] Get: 85 http://deb.debian.org/debian buster/main armhf libjbig0 armhf 2.1-3.1+b2 [28.4 kB] Get: 86 http://deb.debian.org/debian buster/main armhf libwebp6 armhf 0.6.1-2+deb10u1 [229 kB] Get: 87 http://deb.debian.org/debian buster/main armhf libtiff5 armhf 4.1.0+git191117-2~deb10u2 [252 kB] Get: 88 http://deb.debian.org/debian buster/main armhf libxpm4 armhf 1:3.5.12-1 [44.0 kB] Get: 89 http://deb.debian.org/debian buster/main armhf libgd3 armhf 2.2.5-5.2 [117 kB] Get: 90 http://deb.debian.org/debian buster/main armhf libgts-0.7-5 armhf 0.7.6+darcs121130-4 [137 kB] Get: 91 http://deb.debian.org/debian buster/main armhf libltdl7 armhf 2.4.6-9 [387 kB] Get: 92 http://deb.debian.org/debian buster/main armhf libfribidi0 armhf 1.0.5-3.1+deb10u1 [61.7 kB] Get: 93 http://deb.debian.org/debian buster/main armhf libthai-data all 0.1.28-2 [170 kB] Get: 94 http://deb.debian.org/debian buster/main armhf libdatrie1 armhf 0.2.12-2 [35.8 kB] Get: 95 http://deb.debian.org/debian buster/main armhf libthai0 armhf 0.1.28-2 [50.7 kB] Get: 96 http://deb.debian.org/debian buster/main armhf libpango-1.0-0 armhf 1.42.4-8~deb10u1 [169 kB] Get: 97 http://deb.debian.org/debian buster/main armhf libgraphite2-3 armhf 1.3.13-7 [70.3 kB] Get: 98 http://deb.debian.org/debian buster/main armhf libharfbuzz0b armhf 2.3.1-1 [1151 kB] Get: 99 http://deb.debian.org/debian buster/main armhf libpangoft2-1.0-0 armhf 1.42.4-8~deb10u1 [62.7 kB] Get: 100 http://deb.debian.org/debian buster/main armhf libpangocairo-1.0-0 armhf 1.42.4-8~deb10u1 [52.2 kB] Get: 101 http://deb.debian.org/debian buster/main armhf libpathplan4 armhf 2.40.1-6+deb10u1 [61.3 kB] Get: 102 http://deb.debian.org/debian buster/main armhf libxdot4 armhf 2.40.1-6+deb10u1 [55.5 kB] Get: 103 http://deb.debian.org/debian buster/main armhf libgvc6 armhf 2.40.1-6+deb10u1 [555 kB] Get: 104 http://deb.debian.org/debian buster/main armhf libgvpr2 armhf 2.40.1-6+deb10u1 [190 kB] Get: 105 http://deb.debian.org/debian buster/main armhf x11-common all 1:7.7+19 [251 kB] Get: 106 http://deb.debian.org/debian buster/main armhf libice6 armhf 2:1.0.9-2 [51.7 kB] Get: 107 http://deb.debian.org/debian buster/main armhf liblab-gamut1 armhf 2.40.1-6+deb10u1 [220 kB] Get: 108 http://deb.debian.org/debian buster/main armhf libsm6 armhf 2:1.2.3-1 [33.0 kB] Get: 109 http://deb.debian.org/debian buster/main armhf libxt6 armhf 1:1.1.5-1+b3 [159 kB] Get: 110 http://deb.debian.org/debian buster/main armhf libxmu6 armhf 2:1.1.2-2+b3 [52.7 kB] Get: 111 http://deb.debian.org/debian buster/main armhf libxaw7 armhf 2:1.0.13-1+b2 [167 kB] Get: 112 http://deb.debian.org/debian buster/main armhf graphviz armhf 2.40.1-6+deb10u1 [517 kB] Get: 113 http://deb.debian.org/debian buster/main armhf hdf5-helpers armhf 1.10.4+repack-10 [35.2 kB] Get: 114 http://deb.debian.org/debian buster/main armhf libaec0 armhf 1.0.2-1 [21.9 kB] Get: 115 http://deb.debian.org/debian buster/main armhf libsz2 armhf 1.0.2-1 [6584 B] Get: 116 http://deb.debian.org/debian buster/main armhf libaec-dev armhf 1.0.2-1 [19.7 kB] Get: 117 http://deb.debian.org/debian buster/main armhf libboost1.67-dev armhf 1.67.0-13+deb10u1 [8388 kB] Get: 118 http://deb.debian.org/debian buster/main armhf libboost-dev armhf 1.67.0.1 [3860 B] Get: 119 http://deb.debian.org/debian buster/main armhf libcppunit-1.14-0 armhf 1.14.0-3 [131 kB] Get: 120 http://deb.debian.org/debian buster/main armhf libcppunit-dev armhf 1.14.0-3 [193 kB] Get: 121 http://deb.debian.org/debian buster/main armhf libgfortran5 armhf 8.3.0-6 [213 kB] Get: 122 http://deb.debian.org/debian buster/main armhf libhdf5-103 armhf 1.10.4+repack-10 [1285 kB] Get: 123 http://deb.debian.org/debian buster/main armhf libhdf5-cpp-103 armhf 1.10.4+repack-10 [123 kB] Get: 124 http://deb.debian.org/debian buster/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1 [207 kB] Get: 125 http://deb.debian.org/debian buster/main armhf libjpeg62-turbo-dev armhf 1:1.5.2-2+deb10u1 [184 kB] Get: 126 http://deb.debian.org/debian buster/main armhf libjpeg-dev all 1:1.5.2-2+deb10u1 [57.7 kB] Get: 127 http://deb.debian.org/debian buster/main armhf libhdf5-dev armhf 1.10.4+repack-10 [2515 kB] Get: 128 http://deb.debian.org/debian buster/main armhf libjsoncpp-dev armhf 1.7.4-3 [79.7 kB] Fetched 73.6 MB in 6s (12.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 18932 files and directories currently installed.) Preparing to unpack .../000-libbsd0_0.9.1-2+deb10u1_armhf.deb ... Unpacking libbsd0:armhf (0.9.1-2+deb10u1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../001-bsdmainutils_11.1.2+b1_armhf.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../002-libuchardet0_0.0.6-3_armhf.deb ... Unpacking libuchardet0:armhf (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../003-groff-base_1.22.4-3+deb10u1_armhf.deb ... Unpacking groff-base (1.22.4-3+deb10u1) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../004-libpipeline1_1.5.1-2_armhf.deb ... Unpacking libpipeline1:armhf (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../005-man-db_2.8.5-2_armhf.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package libncurses6:armhf. Preparing to unpack .../006-libncurses6_6.1+20181013-2+deb10u2_armhf.deb ... Unpacking libncurses6:armhf (6.1+20181013-2+deb10u2) ... Selecting previously unselected package libprocps7:armhf. Preparing to unpack .../007-libprocps7_2%3a3.3.15-2_armhf.deb ... Unpacking libprocps7:armhf (2:3.3.15-2) ... Selecting previously unselected package lsb-base. Preparing to unpack .../008-lsb-base_10.2019051400_all.deb ... Unpacking lsb-base (10.2019051400) ... Selecting previously unselected package procps. Preparing to unpack .../009-procps_2%3a3.3.15-2_armhf.deb ... Unpacking procps (2:3.3.15-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../010-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../011-libmagic-mgc_1%3a5.35-4+deb10u2_armhf.deb ... Unpacking libmagic-mgc (1:5.35-4+deb10u2) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../012-libmagic1_1%3a5.35-4+deb10u2_armhf.deb ... Unpacking libmagic1:armhf (1:5.35-4+deb10u2) ... Selecting previously unselected package file. Preparing to unpack .../013-file_1%3a5.35-4+deb10u2_armhf.deb ... Unpacking file (1:5.35-4+deb10u2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../014-gettext-base_0.19.8.1-9_armhf.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package ucf. Preparing to unpack .../015-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package libsigsegv2:armhf. Preparing to unpack .../016-libsigsegv2_2.12-2_armhf.deb ... Unpacking libsigsegv2:armhf (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../017-m4_1.4.18-2_armhf.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../018-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../019-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../020-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../021-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package cmake-data. Preparing to unpack .../022-cmake-data_3.13.4-1_all.deb ... Unpacking cmake-data (3.13.4-1) ... Selecting previously unselected package libicu63:armhf. Preparing to unpack .../023-libicu63_63.1-6+deb10u1_armhf.deb ... Unpacking libicu63:armhf (63.1-6+deb10u1) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../024-libxml2_2.9.4+dfsg1-7+deb10u2_armhf.deb ... Unpacking libxml2:armhf (2.9.4+dfsg1-7+deb10u2) ... Selecting previously unselected package libarchive13:armhf. Preparing to unpack .../025-libarchive13_3.3.3-4+deb10u1_armhf.deb ... Unpacking libarchive13:armhf (3.3.3-4+deb10u1) ... Selecting previously unselected package libkeyutils1:armhf. Preparing to unpack .../026-libkeyutils1_1.6-6_armhf.deb ... Unpacking libkeyutils1:armhf (1.6-6) ... Selecting previously unselected package libkrb5support0:armhf. Preparing to unpack .../027-libkrb5support0_1.17-3+deb10u1_armhf.deb ... Unpacking libkrb5support0:armhf (1.17-3+deb10u1) ... Selecting previously unselected package libk5crypto3:armhf. Preparing to unpack .../028-libk5crypto3_1.17-3+deb10u1_armhf.deb ... Unpacking libk5crypto3:armhf (1.17-3+deb10u1) ... Selecting previously unselected package libssl1.1:armhf. Preparing to unpack .../029-libssl1.1_1.1.1d-0+deb10u6_armhf.deb ... Unpacking libssl1.1:armhf (1.1.1d-0+deb10u6) ... Selecting previously unselected package libkrb5-3:armhf. Preparing to unpack .../030-libkrb5-3_1.17-3+deb10u1_armhf.deb ... Unpacking libkrb5-3:armhf (1.17-3+deb10u1) ... Selecting previously unselected package libgssapi-krb5-2:armhf. Preparing to unpack .../031-libgssapi-krb5-2_1.17-3+deb10u1_armhf.deb ... Unpacking libgssapi-krb5-2:armhf (1.17-3+deb10u1) ... Selecting previously unselected package libsasl2-modules-db:armhf. Preparing to unpack .../032-libsasl2-modules-db_2.1.27+dfsg-1+deb10u1_armhf.deb ... Unpacking libsasl2-modules-db:armhf (2.1.27+dfsg-1+deb10u1) ... Selecting previously unselected package libsasl2-2:armhf. Preparing to unpack .../033-libsasl2-2_2.1.27+dfsg-1+deb10u1_armhf.deb ... Unpacking libsasl2-2:armhf (2.1.27+dfsg-1+deb10u1) ... Selecting previously unselected package libldap-common. Preparing to unpack .../034-libldap-common_2.4.47+dfsg-3+deb10u6_all.deb ... Unpacking libldap-common (2.4.47+dfsg-3+deb10u6) ... Selecting previously unselected package libldap-2.4-2:armhf. Preparing to unpack .../035-libldap-2.4-2_2.4.47+dfsg-3+deb10u6_armhf.deb ... Unpacking libldap-2.4-2:armhf (2.4.47+dfsg-3+deb10u6) ... Selecting previously unselected package libnghttp2-14:armhf. Preparing to unpack .../036-libnghttp2-14_1.36.0-2+deb10u1_armhf.deb ... Unpacking libnghttp2-14:armhf (1.36.0-2+deb10u1) ... Selecting previously unselected package libpsl5:armhf. Preparing to unpack .../037-libpsl5_0.20.2-2_armhf.deb ... Unpacking libpsl5:armhf (0.20.2-2) ... Selecting previously unselected package librtmp1:armhf. Preparing to unpack .../038-librtmp1_2.4+20151223.gitfa8646d.1-2_armhf.deb ... Unpacking librtmp1:armhf (2.4+20151223.gitfa8646d.1-2) ... Selecting previously unselected package libssh2-1:armhf. Preparing to unpack .../039-libssh2-1_1.8.0-2.1_armhf.deb ... Unpacking libssh2-1:armhf (1.8.0-2.1) ... Selecting previously unselected package libcurl4:armhf. Preparing to unpack .../040-libcurl4_7.64.0-4+deb10u2_armhf.deb ... Unpacking libcurl4:armhf (7.64.0-4+deb10u2) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../041-libexpat1_2.2.6-2+deb10u1_armhf.deb ... Unpacking libexpat1:armhf (2.2.6-2+deb10u1) ... Selecting previously unselected package libjsoncpp1:armhf. Preparing to unpack .../042-libjsoncpp1_1.7.4-3_armhf.deb ... Unpacking libjsoncpp1:armhf (1.7.4-3) ... Selecting previously unselected package librhash0:armhf. Preparing to unpack .../043-librhash0_1.3.8-1_armhf.deb ... Unpacking librhash0:armhf (1.3.8-1) ... Selecting previously unselected package libuv1:armhf. Preparing to unpack .../044-libuv1_1.24.1-1_armhf.deb ... Unpacking libuv1:armhf (1.24.1-1) ... Selecting previously unselected package cmake. Preparing to unpack .../045-cmake_3.13.4-1_armhf.deb ... Unpacking cmake (3.13.4-1) ... Selecting previously unselected package d-shlibs. Preparing to unpack .../046-d-shlibs_0.84_all.deb ... Unpacking d-shlibs (0.84) ... Selecting previously unselected package libtool. Preparing to unpack .../047-libtool_2.4.6-9_all.deb ... Unpacking libtool (2.4.6-9) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../048-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../049-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../050-libfile-stripnondeterminism-perl_1.1.2-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.2-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../051-dh-strip-nondeterminism_1.1.2-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.2-1) ... Selecting previously unselected package libelf1:armhf. Preparing to unpack .../052-libelf1_0.176-1.1_armhf.deb ... Unpacking libelf1:armhf (0.176-1.1) ... Selecting previously unselected package dwz. Preparing to unpack .../053-dwz_0.12-3_armhf.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:armhf. Preparing to unpack .../054-libglib2.0-0_2.58.3-2+deb10u3_armhf.deb ... Unpacking libglib2.0-0:armhf (2.58.3-2+deb10u3) ... Selecting previously unselected package libcroco3:armhf. Preparing to unpack .../055-libcroco3_0.6.12-3_armhf.deb ... Unpacking libcroco3:armhf (0.6.12-3) ... Selecting previously unselected package gettext. Preparing to unpack .../056-gettext_0.19.8.1-9_armhf.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../057-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../058-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../059-debhelper_12.1.1_all.deb ... Unpacking debhelper (12.1.1) ... Selecting previously unselected package libedit2:armhf. Preparing to unpack .../060-libedit2_3.1-20181209-1_armhf.deb ... Unpacking libedit2:armhf (3.1-20181209-1) ... Selecting previously unselected package libllvm6.0:armhf. Preparing to unpack .../061-libllvm6.0_1%3a6.0.1-10_armhf.deb ... Unpacking libllvm6.0:armhf (1:6.0.1-10) ... Selecting previously unselected package libclang1-6.0:armhf. Preparing to unpack .../062-libclang1-6.0_1%3a6.0.1-10_armhf.deb ... Unpacking libclang1-6.0:armhf (1:6.0.1-10) ... Selecting previously unselected package doxygen. Preparing to unpack .../063-doxygen_1.8.13-10_armhf.deb ... Unpacking doxygen (1.8.13-10) ... Selecting previously unselected package libpng16-16:armhf. Preparing to unpack .../064-libpng16-16_1.6.36-6_armhf.deb ... Unpacking libpng16-16:armhf (1.6.36-6) ... Selecting previously unselected package libfreetype6:armhf. Preparing to unpack .../065-libfreetype6_2.9.1-3+deb10u2_armhf.deb ... Unpacking libfreetype6:armhf (2.9.1-3+deb10u2) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../066-fonts-dejavu-core_2.37-1_all.deb ... Unpacking fonts-dejavu-core (2.37-1) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../067-fontconfig-config_2.13.1-2_all.deb ... Unpacking fontconfig-config (2.13.1-2) ... Selecting previously unselected package libfontconfig1:armhf. Preparing to unpack .../068-libfontconfig1_2.13.1-2_armhf.deb ... Unpacking libfontconfig1:armhf (2.13.1-2) ... Selecting previously unselected package fontconfig. Preparing to unpack .../069-fontconfig_2.13.1-2_armhf.deb ... Unpacking fontconfig (2.13.1-2) ... Selecting previously unselected package libpixman-1-0:armhf. Preparing to unpack .../070-libpixman-1-0_0.36.0-1_armhf.deb ... Unpacking libpixman-1-0:armhf (0.36.0-1) ... Selecting previously unselected package libxau6:armhf. Preparing to unpack .../071-libxau6_1%3a1.0.8-1+b2_armhf.deb ... Unpacking libxau6:armhf (1:1.0.8-1+b2) ... Selecting previously unselected package libxdmcp6:armhf. Preparing to unpack .../072-libxdmcp6_1%3a1.1.2-3_armhf.deb ... Unpacking libxdmcp6:armhf (1:1.1.2-3) ... Selecting previously unselected package libxcb1:armhf. Preparing to unpack .../073-libxcb1_1.13.1-2_armhf.deb ... Unpacking libxcb1:armhf (1.13.1-2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../074-libx11-data_2%3a1.6.7-1+deb10u2_all.deb ... Unpacking libx11-data (2:1.6.7-1+deb10u2) ... Selecting previously unselected package libx11-6:armhf. Preparing to unpack .../075-libx11-6_2%3a1.6.7-1+deb10u2_armhf.deb ... Unpacking libx11-6:armhf (2:1.6.7-1+deb10u2) ... Selecting previously unselected package libxcb-render0:armhf. Preparing to unpack .../076-libxcb-render0_1.13.1-2_armhf.deb ... Unpacking libxcb-render0:armhf (1.13.1-2) ... Selecting previously unselected package libxcb-shm0:armhf. Preparing to unpack .../077-libxcb-shm0_1.13.1-2_armhf.deb ... Unpacking libxcb-shm0:armhf (1.13.1-2) ... Selecting previously unselected package libxext6:armhf. Preparing to unpack .../078-libxext6_2%3a1.3.3-1+b2_armhf.deb ... Unpacking libxext6:armhf (2:1.3.3-1+b2) ... Selecting previously unselected package libxrender1:armhf. Preparing to unpack .../079-libxrender1_1%3a0.9.10-1_armhf.deb ... Unpacking libxrender1:armhf (1:0.9.10-1) ... Selecting previously unselected package libcairo2:armhf. Preparing to unpack .../080-libcairo2_1.16.0-4+deb10u1_armhf.deb ... Unpacking libcairo2:armhf (1.16.0-4+deb10u1) ... Selecting previously unselected package libcdt5. Preparing to unpack .../081-libcdt5_2.40.1-6+deb10u1_armhf.deb ... Unpacking libcdt5 (2.40.1-6+deb10u1) ... Selecting previously unselected package libcgraph6. Preparing to unpack .../082-libcgraph6_2.40.1-6+deb10u1_armhf.deb ... Unpacking libcgraph6 (2.40.1-6+deb10u1) ... Selecting previously unselected package libjpeg62-turbo:armhf. Preparing to unpack .../083-libjpeg62-turbo_1%3a1.5.2-2+deb10u1_armhf.deb ... Unpacking libjpeg62-turbo:armhf (1:1.5.2-2+deb10u1) ... Selecting previously unselected package libjbig0:armhf. 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Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-9) ... Setting up libxpm4:armhf (1:3.5.12-1) ... Setting up libxrender1:armhf (1:0.9.10-1) ... Setting up fontconfig-config (2.13.1-2) ... Setting up libhdf5-cpp-103:armhf (1.10.4+repack-10) ... Setting up libxext6:armhf (2:1.3.3-1+b2) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libhdf5-dev (1.10.4+repack-10) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libxt6:armhf (1:1.1.5-1+b3) ... Setting up cmake (3.13.4-1) ... Setting up libfontconfig1:armhf (2.13.1-2) ... Setting up fontconfig (2.13.1-2) ... Regenerating fonts cache... done. Setting up libxmu6:armhf (2:1.1.2-2+b3) ... 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Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../gatb-core_1.4.1+git20181225.44d5a44+dfsg-3_source.changes dpkg-buildpackage: info: source package gatb-core dpkg-buildpackage: info: source version 1.4.1+git20181225.44d5a44+dfsg-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --sourcedirectory=gatb-core dh_auto_clean -O--sourcedirectory=gatb-core dh_autoreconf_clean -O--sourcedirectory=gatb-core dh_clean -O--sourcedirectory=gatb-core debian/rules build dh build --sourcedirectory=gatb-core dh_update_autotools_config -O--sourcedirectory=gatb-core dh_autoreconf -O--sourcedirectory=gatb-core dh_auto_configure -O--sourcedirectory=gatb-core cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf ../gatb-core -- The C compiler identification is GNU 8.3.0 -- The CXX compiler identification is GNU 8.3.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- CppUnit: found headers (in /usr/include) but not the static library (/usr/include/../lib/libcppunit.a) -- CppUnit FOUND (/usr/include) -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of __uint128 -- Check size of __uint128 - failed -- Check size of __uint128_t -- Check size of __uint128_t - failed -- Options: -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libpthread.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.so;/usr/lib/arm-linux-gnueabihf/libm.so (found version "1.10.4") -- HDF5_LIBRARIES="/usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so/usr/lib/arm-linux-gnueabihf/libpthread.so/usr/lib/arm-linux-gnueabihf/libsz.so/usr/lib/arm-linux-gnueabihf/libz.so/usr/lib/arm-linux-gnueabihf/libdl.so/usr/lib/arm-linux-gnueabihf/libm.so" -- OPTIMIZED KMER SIZES INTERVALS ARE 32 64 96 128 <-- max supported kmer size without recompilation CMake Warning (dev) at CMakeLists.txt:238 (set): Cannot set "gatb-core-klist": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. -- ---------- GATB TESTS ---------- -- ---------- GATB TOOLS ---------- DYNAMIC BINARIES for dbgh5 DYNAMIC BINARIES for dbginfo DYNAMIC BINARIES for leon -- Found HDF5: /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libpthread.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.so;/usr/lib/arm-linux-gnueabihf/libm.so (found version "1.10.4") found components: C CMake Warning (dev) at CMakeLists.txt:265 (set): Cannot set "gatb-core-flags": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:266 (set): Cannot set "gatb-core-includes": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:267 (set): Cannot set "gatb-core-libraries": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:268 (set): Cannot set "gatb-core-cmake": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. -- Found Doxygen: /usr/bin/doxygen (found version "1.8.13") found components: doxygen dot -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY -- Build files have been written to: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg' dh_auto_build -a cd obj-arm-linux-gnueabihf && make -j3 "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core -B/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/CMakeFiles /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' make -f src/CMakeFiles/gatbcore-dynamic.dir/build.make src/CMakeFiles/gatbcore-dynamic.dir/depend make -f src/CMakeFiles/gatbcore-static.dir/build.make src/CMakeFiles/gatbcore-static.dir/depend make -f thirdparty/CMakeFiles/thirdparty_copy.dir/build.make thirdparty/CMakeFiles/thirdparty_copy.dir/depend make[4]: Entering directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/CMakeFiles/gatbcore-dynamic.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/thirdparty /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/thirdparty/CMakeFiles/thirdparty_copy.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/CMakeFiles/gatbcore-static.dir/DependInfo.cmake --color= Scanning dependencies of target thirdparty_copy make[4]: Leaving directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' make -f thirdparty/CMakeFiles/thirdparty_copy.dir/build.make thirdparty/CMakeFiles/thirdparty_copy.dir/build make[4]: Entering directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/thirdparty && /usr/bin/cmake -E make_directory /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/json cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/thirdparty && /usr/bin/cmake -E make_directory /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/thirdparty && /usr/bin/cmake -E copy_if_different /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty/BooPHF/BooPHF.h /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/ cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/thirdparty && /usr/bin/cmake -E copy_if_different /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty/json/json.hpp /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/json/ make[4]: Leaving directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' [ 0%] Built target thirdparty_copy Scanning dependencies of target gatbcore-dynamic make[4]: Leaving directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' make -f src/CMakeFiles/gatbcore-dynamic.dir/build.make src/CMakeFiles/gatbcore-dynamic.dir/build Scanning dependencies of target gatbcore-static make[4]: Leaving directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' make -f src/CMakeFiles/gatbcore-static.dir/build.make src/CMakeFiles/gatbcore-static.dir/build make[4]: Entering directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' [ 1%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankAlbum.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankAlbum.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankAlbum.cpp [ 1%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/Bank.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/Bank.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/Bank.cpp make[4]: Entering directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' [ 2%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/Bank.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/Bank.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/Bank.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/Bank.cpp:23: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/Bank.cpp:23: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankAlbum.cpp [ 2%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankBinary.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankBinary.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp [ 3%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankConverterAlgorithm.cpp /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In function 'bool gatb::core::bank::impl::checkMagic(FILE*)': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp:54:11: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread (&value, sizeof(value), 1, file); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In member function 'virtual void gatb::core::bank::impl::BankBinary::Iterator::next()': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp:453:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread (_bufferData->getBuffer(), sizeof( char),block_size, binary_read_file); // read a block of reads into the buffer ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankFasta.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankFasta.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankFasta.cpp [ 4%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp [ 4%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankHelpers.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankHelpers.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankHelpers.cpp /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In function 'bool gatb::core::bank::impl::checkMagic(FILE*)': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp:54:11: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread (&value, sizeof(value), 1, file); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In member function 'virtual void gatb::core::bank::impl::BankBinary::Iterator::next()': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp:453:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread (_bufferData->getBuffer(), sizeof( char),block_size, binary_read_file); // read a block of reads into the buffer ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 5%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankRandom.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankRandom.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankRandom.cpp [ 5%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankConverterAlgorithm.cpp [ 5%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankSplitter.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankSplitter.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankSplitter.cpp [ 6%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bcalm_algo.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bcalm_algo.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp [ 6%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankFasta.cpp [ 6%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bglue_algo.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bglue_algo.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp [ 7%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankHelpers.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 7%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankRandom.cpp [ 7%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/logging.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/logging.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp [ 8%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankSplitter.cpp /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp: In function 'long unsigned int gatb::core::debruijn::impl::logging(std::__cxx11::string)': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp:31:33: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] snprintf (tmp, sizeof(tmp), " memory [current, maxRSS]: [%4lu, %4lu] MB ", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem, memMaxProcess); ~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp:31:33: warning: format '%lu' expects argument of type 'long unsigned int', but argument 5 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] [ 9%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/ograph.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/ograph.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp [ 9%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bcalm_algo.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bcalm_algo.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp [ 9%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bglue_algo.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bglue_algo.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp [ 9%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp [ 10%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/logging.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/logging.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp: In function 'long unsigned int gatb::core::debruijn::impl::logging(std::__cxx11::string)': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp:31:33: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] snprintf (tmp, sizeof(tmp), " memory [current, maxRSS]: [%4lu, %4lu] MB ", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem, memMaxProcess); ~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp:31:33: warning: format '%lu' expects argument of type 'long unsigned int', but argument 5 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] [ 10%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/ograph.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/ograph.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 11%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp [ 12%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp [ 12%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 12%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 [ 12%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Graph.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Graph.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp [ 13%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.hpp:27, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 14%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/LinkTigs.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/LinkTigs.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/LinkTigs.cpp [ 14%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Simplifications.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Simplifications.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 14%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 15%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type' {aka 'unsigned int'} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ [ 15%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 [ 16%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ [ 16%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomBuilder.cpp [ 16%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Configuration.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Configuration.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Configuration.cpp [ 17%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/ConfigurationAlgorithm.cpp [ 17%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.cpp [ 18%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp [ 18%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/LinearCounter.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/LinearCounter.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/LinearCounter.cpp [ 18%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp [ 19%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 19%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ModelData.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ModelData.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/ModelData.cpp [ 20%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartiInfo.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartiInfo.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp [ 20%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp: In member function 'void gatb::core::kmer::impl::Repartitor::printInfo()': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:308:12: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=] printf("Repartitor : nbMinimizers=%ld\n", nbMinimizers); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:309:61: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] for (u_int64_t ii=0; ii*, std::vector > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Repartitor::itriple&}; _Tp = gatb::core::kmer::impl::Repartitor::itriple; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Repartitor::itriple}; _Tp = gatb::core::kmer::impl::Repartitor::itriple; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::kmer::impl::Repartitor::computeDistrib(const gatb::core::kmer::impl::PartiInfo<5>&)': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 20%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/RepartitionAlgorithm.cpp [ 21%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.hpp:27, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 22%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp [ 22%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/FileSystemCommon.cpp [ 23%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/FileSystemLinux.cpp [ 23%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/FileSystemMacos.cpp [ 23%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.cpp [ 25%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/SystemInfoCommon.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 25%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp [ 25%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/LinkTigs.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/LinkTigs.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/LinkTigs.cpp [ 26%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/ThreadMacos.cpp [ 26%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/Bloom.cpp /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp: In constructor 'gatb::core::system::impl::ThreadLinux::ThreadLinux(void* (*)(void*), void*)': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp:51:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable] int ret = pthread_attr_init ( &tattr ) ; ^~~ [ 26%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/DnaCoder.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/DnaCoder.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp [ 27%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/HeaderCoder.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/HeaderCoder.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp [ 28%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:27, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp: In member function 'kmer_type DnaDecoder::extendAnchor(kmer_type, int, bool)': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of 'const int [5]' [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of 'const int [5]' [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:27, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp: In member function 'void DnaDecoder::decodeAnchorRead()': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of 'const int [5]' [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of 'const int [5]' [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of 'const int [5]' [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of 'const int [5]' [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/stl_vector.h: In member function 'void DnaEncoder::buildKmers()': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 28%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/Leon.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/Leon.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp [ 29%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/RangeCoder.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/RangeCoder.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/RangeCoder.cpp [ 29%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp [ 29%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Command.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Command.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Command.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 29%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Observer.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Observer.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Observer.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:71, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/Bloom.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ [ 30%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/api/Data.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/api/Data.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.cpp [ 30%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Algorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Algorithm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 30%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp [ 31%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Histogram.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Histogram.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type' {aka 'unsigned int'} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ [ 32%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp [ 32%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/OptionsParser.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/OptionsParser.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/OptionsParser.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 32%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp [ 32%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Progress.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Progress.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp: In member function 'virtual void gatb::core::tools::misc::impl::ProgressTimerAndSystem::fillBuffer(double)': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:33: warning: format '%lu' expects argument of type 'long unsigned int', but argument 5 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] snprintf (tmp, sizeof(tmp), " cpu: %5.1f %% mem: [%4lu, %4lu, %4lu] MB ", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:352:9: mem, _memMax, memMaxProcess ~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:33: warning: format '%lu' expects argument of type 'long unsigned int', but argument 6 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:33: warning: format '%lu' expects argument of type 'long unsigned int', but argument 7 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] [ 33%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomBuilder.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomBuilder.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomBuilder.cpp [ 33%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Configuration.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Configuration.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Configuration.cpp [ 34%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Property.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Property.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp: In member function 'virtual void gatb::core::tools::misc::impl::Properties::setInt(const string&, const int64_t&)': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp:438:39: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'int64_t' {aka 'long long int'} [-Wformat=] snprintf (buffer, sizeof(buffer), "%ld", value); ^~~~~ ~~~~~ [ 34%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/ConfigurationAlgorithm.cpp In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/stl_vector.h: In member function 'void Leon::decodeAnchorDict()': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void Leon::startDecompression_setup()': /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ [ 34%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/TimeInfo.cpp [ 35%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time 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-Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tool.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Tool.cpp [ 36%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/XmlReader.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/XmlReader.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/XmlReader.cpp [ 36%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp [ 37%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/Storage.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/Storage.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp [ 38%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/LinearCounter.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/LinearCounter.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/LinearCounter.cpp [ 38%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/StorageTools.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/StorageTools.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ [ 39%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp [ 39%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::tools::storage::impl::SuperKmerBinFiles::SuperKmerBinFiles(const string&, const string&, size_t)': /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:13:17: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 39%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Model.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Model.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp [ 40%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ModelData.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ModelData.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/ModelData.cpp [ 40%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartiInfo.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartiInfo.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 40%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp: In member function 'void gatb::core::kmer::impl::Repartitor::printInfo()': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:308:12: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=] printf("Repartitor : nbMinimizers=%ld\n", nbMinimizers); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:309:61: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] for (u_int64_t ii=0; ii::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 32]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:13:17: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Repartitor::itriple&}; _Tp = gatb::core::kmer::impl::Repartitor::itriple; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Repartitor::itriple}; _Tp = gatb::core::kmer::impl::Repartitor::itriple; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::kmer::impl::Repartitor::computeDistrib(const gatb::core::kmer::impl::PartiInfo<5>&)': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartitionsCommand.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartitionsCommand.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp [ 41%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp [ 41%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/RepartitionAlgorithm.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 64]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:13:17: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp [ 42%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemCommon.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemCommon.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/FileSystemCommon.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 96]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:13:17: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemLinux.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemLinux.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/FileSystemLinux.cpp [ 44%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemMacos.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemMacos.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/FileSystemMacos.cpp [ 44%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/System.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/System.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.cpp [ 44%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/SystemInfoCommon.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/SystemInfoCommon.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/SystemInfoCommon.cpp [ 45%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadLinux.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadLinux.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp: In constructor 'gatb::core::system::impl::ThreadLinux::ThreadLinux(void* (*)(void*), void*)': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp:51:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable] int ret = pthread_attr_init ( &tattr ) ; ^~~ [ 45%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadMacos.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadMacos.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/ThreadMacos.cpp [ 46%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/collections/impl/Bloom.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/collections/impl/Bloom.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/Bloom.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:3: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In instantiation of 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:31:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:236:10: warning: unused variable 'debug_index' [-Wunused-variable] uint debug_index = 0; ^~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of 'uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:765:60: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 128; std::__cxx11::string = std::__cxx11::basic_string]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:29:9: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp: In instantiation of 'void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, const std::vector >&, int, bool) [with int SPAN = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1106:48: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 128; std::__cxx11::string = std::__cxx11::basic_string]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:29:9: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:258:18: warning: unused variable 'first_index' [-Wunused-variable] uint32_t first_index = markedSequence_index; ^~~~~~~~~~~ [ 46%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/DnaCoder.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/DnaCoder.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp [ 47%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:3: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In instantiation of 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 32]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:31:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:236:10: warning: unused variable 'debug_index' [-Wunused-variable] uint debug_index = 0; ^~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of 'uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:765:60: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 32; std::__cxx11::string = std::__cxx11::basic_string]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:29:9: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp: In instantiation of 'void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, const std::vector >&, int, bool) [with int SPAN = 32]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1106:48: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 32; std::__cxx11::string = std::__cxx11::basic_string]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:29:9: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:258:18: warning: unused variable 'first_index' [-Wunused-variable] uint32_t first_index = markedSequence_index; ^~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<32>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<32>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<32>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<32>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:27, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp: In member function 'kmer_type DnaDecoder::extendAnchor(kmer_type, int, bool)': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of 'const int [5]' [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of 'const int [5]' [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/stl_vector.h: In member function 'void DnaEncoder::buildKmers()': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 [ 47%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/HeaderCoder.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/HeaderCoder.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<128>&}; _Tp = gatb::core::debruijn::impl::markedSeq<128>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator' {aka '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<128>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<128>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 128]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<32>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<32>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<32>::KmerCanonical; unsigned int span = 32]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<32>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool)::InsertTravellerKmer::operator()(const gatb::core::bank::Sequence&) [with unsigned int SPAN = 128]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In lambda function: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 128]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<32>&}; _Tp = gatb::core::debruijn::impl::markedSeq<32>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator' {aka '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<32>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<32>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 32]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In lambda function: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/bits/char_traits.h:39, from /usr/include/c++/8/string:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/api/ICell.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Cell.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algobase.h: In function 'void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >]': /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 iter_swap(_ForwardIterator1 __a, _ForwardIterator2 __b) ^~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:84:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::iter_swap(__result, __b); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:86:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::iter_swap(__result, __c); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:88:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::iter_swap(__result, __a); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 48%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/Leon.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/Leon.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 32]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<128>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<128>]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 128]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:71, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/Bloom.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 32]::UniquifyKeys]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Command.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:14, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 128]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 32]::InsertTravellerKmer]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<32>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<32>]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 128]::': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 32]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 32]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 32]::': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 48%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:3: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In instantiation of 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 64]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:31:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:236:10: warning: unused variable 'debug_index' [-Wunused-variable] uint debug_index = 0; ^~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of 'uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:765:60: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 64; std::__cxx11::string = std::__cxx11::basic_string]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:29:9: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp: In instantiation of 'void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, const std::vector >&, int, bool) [with int SPAN = 64]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1106:48: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 64; std::__cxx11::string = std::__cxx11::basic_string]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:29:9: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:258:18: warning: unused variable 'first_index' [-Wunused-variable] uint32_t first_index = markedSequence_index; ^~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 48%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:3: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In instantiation of 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 96]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:31:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:236:10: warning: unused variable 'debug_index' [-Wunused-variable] uint debug_index = 0; ^~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of 'uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:765:60: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 96; std::__cxx11::string = std::__cxx11::basic_string]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:29:9: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp: In instantiation of 'void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, const std::vector >&, int, bool) [with int SPAN = 96]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1106:48: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 96; std::__cxx11::string = std::__cxx11::basic_string]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:29:9: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:258:18: warning: unused variable 'first_index' [-Wunused-variable] uint32_t first_index = markedSequence_index; ^~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::tuple; _Compare = __gnu_cxx::__ops::_Iter_comp_val > >]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/stl_vector.h: In member function 'void Leon::decodeAnchorDict()': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void Leon::startDecompression_setup()': /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<64>&}; _Tp = gatb::core::debruijn::impl::markedSeq<64>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator' {aka '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<64>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<64>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 48%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/RangeCoder.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/RangeCoder.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/RangeCoder.cpp /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ [ 50%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Command.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Command.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Command.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 64]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Observer.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Observer.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Observer.cpp /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<96>&}; _Tp = gatb::core::debruijn::impl::markedSeq<96>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 50%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/api/Data.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/api/Data.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator' {aka '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 64]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<96>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<96>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 51%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Algorithm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Algorithm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In lambda function: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 96]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool)::InsertTravellerKmer::operator()(const gatb::core::bank::Sequence&) [with unsigned int SPAN = 96]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In lambda function: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 96]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 64]::UniquifyKeys]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Command.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:14, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 64]::InsertTravellerKmer]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 51%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Histogram.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Histogram.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<64>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<64>]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 64]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 64]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<96>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<96>]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 64]::': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 96]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/OptionsParser.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/OptionsParser.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/OptionsParser.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 96]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 96]::': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Progress.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Progress.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp [ 53%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp: In member function 'virtual void gatb::core::tools::misc::impl::ProgressTimerAndSystem::fillBuffer(double)': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:33: warning: format '%lu' expects argument of type 'long unsigned int', but argument 5 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] snprintf (tmp, sizeof(tmp), " cpu: %5.1f %% mem: [%4lu, %4lu, %4lu] MB ", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:352:9: mem, _memMax, memMaxProcess ~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:33: warning: format '%lu' expects argument of type 'long unsigned int', but argument 6 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:33: warning: format '%lu' expects argument of type 'long unsigned int', but argument 7 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] [ 53%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Property.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Property.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp: In member function 'virtual void gatb::core::tools::misc::impl::Properties::setInt(const string&, const int64_t&)': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp:438:39: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'int64_t' {aka 'long long int'} [-Wformat=] snprintf (buffer, sizeof(buffer), "%ld", value); ^~~~~ ~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:14:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:14:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of 'void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int jj=0; jj<= _histogram->getLength2(); jj++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int ii=1; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1057:5: required from 'void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 128; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<128>::SuperKmer]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1048:8: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ [ 53%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp [ 54%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/TimeInfo.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/TimeInfo.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/TimeInfo.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:14:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 32]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:14:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ [ 54%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tokenizer.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tokenizer.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Tokenizer.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of 'void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 32]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int jj=0; jj<= _histogram->getLength2(); jj++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int ii=1; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 32]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1057:5: required from 'void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 32; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<>::SuperKmer]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1048:8: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ [ 55%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tool.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tool.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Tool.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 128]::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 [ 55%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/XmlReader.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/XmlReader.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/XmlReader.cpp [ 55%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/Storage.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/Storage.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::tools::storage::impl::SuperKmerBinFiles::SuperKmerBinFiles(const string&, const string&, size_t)': /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 128]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 128]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 56%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/StorageTools.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/StorageTools.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.cpp /usr/include/c++/8/bits/vector.tcc: In member function 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 32]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 32]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 56%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 128]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:13:17: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 32]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 57%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 32]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:13:17: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ [ 58%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:14:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 58%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 64]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:14:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of 'void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 64]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int jj=0; jj<= _histogram->getLength2(); jj++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int ii=1; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 64]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1057:5: required from 'void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 64; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<64>::SuperKmer]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1048:8: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:14:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 96]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:14:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of 'void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 96]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int jj=0; jj<= _histogram->getLength2(); jj++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int ii=1; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 96]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1057:5: required from 'void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 96; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<96>::SuperKmer]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1048:8: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ [ 58%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 64]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:13:17: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 64]::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 96]::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 58%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 96]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:13:17: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 64]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 64]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 96]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 96]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 64]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 96]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 59%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:3: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In instantiation of 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:31:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:236:10: warning: unused variable 'debug_index' [-Wunused-variable] uint debug_index = 0; ^~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of 'uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:765:60: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 128; std::__cxx11::string = std::__cxx11::basic_string]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:29:9: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp: In instantiation of 'void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, const std::vector >&, int, bool) [with int SPAN = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1106:48: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 128; std::__cxx11::string = std::__cxx11::basic_string]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:29:9: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:258:18: warning: unused variable 'first_index' [-Wunused-variable] uint32_t first_index = markedSequence_index; ^~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ [ 59%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 [ 60%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<128>&}; _Tp = gatb::core::debruijn::impl::markedSeq<128>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<4>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator' {aka '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<128>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<128>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 128]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool)::InsertTravellerKmer::operator()(const gatb::core::bank::Sequence&) [with unsigned int SPAN = 128]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In lambda function: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<1>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 128]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 32]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<4>&}; _Tp = gatb::core::tools::math::LargeInt<4>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 128]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<4>]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<128>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<128>]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<4>]': /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 binary_search(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.hpp:38, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:50, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp: In member function 'bool gatb::core::tools::collections::impl::ContainerSet::contains(const Item&) [with Item = gatb::core::tools::math::LargeInt<4>]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp:69:35: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 return std::binary_search (_items.begin(), _items.end(), item); ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<1>]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 128]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:7: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function 'void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateIncomingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<128>::Count, gatb::core::tools::math::LargeInt<4> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function 'void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateOutgoingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<128>::Count, gatb::core::tools::math::LargeInt<4> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 128]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 128]::': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 60%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp [ 61%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp [ 61%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:3: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In instantiation of 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 32]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:31:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:236:10: warning: unused variable 'debug_index' [-Wunused-variable] uint debug_index = 0; ^~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of 'uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:765:60: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 32; std::__cxx11::string = std::__cxx11::basic_string]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:29:9: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp: In instantiation of 'void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, const std::vector >&, int, bool) [with int SPAN = 32]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1106:48: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 32; std::__cxx11::string = std::__cxx11::basic_string]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:29:9: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:258:18: warning: unused variable 'first_index' [-Wunused-variable] uint32_t first_index = markedSequence_index; ^~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<32>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<32>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<32>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<32>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<2>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<3>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<2>&}; _Tp = gatb::core::tools::math::LargeInt<2>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<3>&}; _Tp = gatb::core::tools::math::LargeInt<3>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 64]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<2>]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 96]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<3>]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<32>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<32>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<32>::KmerCanonical; unsigned int span = 32]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<32>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<3>]': /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 binary_search(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.hpp:38, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:50, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp: In member function 'bool gatb::core::tools::collections::impl::ContainerSet::contains(const Item&) [with Item = gatb::core::tools::math::LargeInt<3>]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp:69:35: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 return std::binary_search (_items.begin(), _items.end(), item); ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:7: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<96>::Count; Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<96>::Count, gatb::core::tools::math::LargeInt<3> >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<32>&}; _Tp = gatb::core::debruijn::impl::markedSeq<32>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator' {aka '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<32>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<32>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 32]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In lambda function: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/char_traits.h:39, from /usr/include/c++/8/string:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/api/ICell.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Cell.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algobase.h: In function 'void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >]': /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 iter_swap(_ForwardIterator1 __a, _ForwardIterator2 __b) ^~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:84:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::iter_swap(__result, __b); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:86:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::iter_swap(__result, __c); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:88:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::iter_swap(__result, __a); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 32]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 61%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of 'void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 128; Abundance_t = unsigned char; NodeState_t = unsigned char]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:13:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:311:21: warning: unused variable 'abundance' [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of 'void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 32; Abundance_t = unsigned char; NodeState_t = unsigned char]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:13:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:311:21: warning: unused variable 'abundance' [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 32]::UniquifyKeys]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Command.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:14, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 32]::InsertTravellerKmer]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<32>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<32>]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 32]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 32]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 62%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 32]::': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of 'void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 64; Abundance_t = unsigned char; NodeState_t = unsigned char]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:13:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:311:21: warning: unused variable 'abundance' [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of 'void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 96; Abundance_t = unsigned char; NodeState_t = unsigned char]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:13:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:311:21: warning: unused variable 'abundance' [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ [ 63%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp [ 64%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp [ 64%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:3: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In instantiation of 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 64]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:31:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:236:10: warning: unused variable 'debug_index' [-Wunused-variable] uint debug_index = 0; ^~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of 'uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:765:60: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 64; std::__cxx11::string = std::__cxx11::basic_string]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:29:9: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp: In instantiation of 'void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, const std::vector >&, int, bool) [with int SPAN = 64]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1106:48: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 64; std::__cxx11::string = std::__cxx11::basic_string]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:29:9: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:258:18: warning: unused variable 'first_index' [-Wunused-variable] uint32_t first_index = markedSequence_index; ^~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::tuple; _Compare = __gnu_cxx::__ops::_Iter_comp_val > >]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<64>&}; _Tp = gatb::core::debruijn::impl::markedSeq<64>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator' {aka '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<64>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<64>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 64]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 64]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In lambda function: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 64]::UniquifyKeys]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Command.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:14, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 64]::InsertTravellerKmer]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<64>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<64>]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 64]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 64]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 64]::': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 64%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:3: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In instantiation of 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 96]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:31:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:236:10: warning: unused variable 'debug_index' [-Wunused-variable] uint debug_index = 0; ^~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of 'uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:765:60: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 96; std::__cxx11::string = std::__cxx11::basic_string]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:29:9: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::unordered_map, std::equal_to, std::allocator > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp: In instantiation of 'void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, const std::vector >&, int, bool) [with int SPAN = 96]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1106:48: required from 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 96; std::__cxx11::string = std::__cxx11::basic_string]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:29:9: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:258:18: warning: unused variable 'first_index' [-Wunused-variable] uint32_t first_index = markedSequence_index; ^~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 32; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:7: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:7: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 32; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<96>&}; _Tp = gatb::core::debruijn::impl::markedSeq<96>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator' {aka '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<96>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<96>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 96]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool)::InsertTravellerKmer::operator()(const gatb::core::bank::Sequence&) [with unsigned int SPAN = 96]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In lambda function: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 96]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 } ^ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<96>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<96>]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 96]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function 'void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 96]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 96]::': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 64%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:14:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) [ 64%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:14:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of 'void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int jj=0; jj<= _histogram->getLength2(); jj++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int ii=1; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1057:5: required from 'void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 128; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<128>::SuperKmer]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1048:8: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ [ 65%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 128]::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 128]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 128]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 128]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:14:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 32]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:14:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of 'void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 32]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int jj=0; jj<= _histogram->getLength2(); jj++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int ii=1; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 32]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1057:5: required from 'void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 32; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<>::SuperKmer]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1048:8: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:7: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:7: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 32]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 32]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 32]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:14:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 64]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:14:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of 'void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 64]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int jj=0; jj<= _histogram->getLength2(); jj++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int ii=1; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 64]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1057:5: required from 'void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 64; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<64>::SuperKmer]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1048:8: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ [ 66%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ [ 67%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type' {aka 'unsigned int'} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:18:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set > >, std::less > > >, std::allocator > > > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type' {aka 'unsigned int'} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:18:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set > >, std::less > > >, std::allocator > > > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /usr/include/c++/8/vector:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_algobase.h: In function '_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<4>; _Compare = __gnu_cxx::__ops::_Iter_less_val]': /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __lower_bound(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_algobase.h: In member function 'int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::LargeInt<4>; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h: In member function 'void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Edge&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h: In member function 'void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Node&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 64]::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<4>&}; _Tp = gatb::core::tools::math::LargeInt<4>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque > >, std::allocator > > > >::const_iterator' {aka 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque > >, std::allocator > > > >::const_iterator' {aka 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 67%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp [ 67%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 64]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 64]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type' {aka 'unsigned int'} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:18:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set > >, std::less > > >, std::allocator > > > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type' {aka 'unsigned int'} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:18:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set > >, std::less > > >, std::allocator > > > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 64]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_algobase.h: In function '_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<3>; _Compare = __gnu_cxx::__ops::_Iter_less_val]': /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __lower_bound(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_algobase.h: In member function 'int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::LargeInt<3>; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h: In member function 'void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Edge&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h: In member function 'void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Node&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<2>&}; _Tp = gatb::core::tools::math::LargeInt<2>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<3>&}; _Tp = gatb::core::tools::math::LargeInt<3>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque > >, std::allocator > > > >::const_iterator' {aka 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/set:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque > >, std::allocator > > > >::const_iterator' {aka 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ [ 68%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp [ 68%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 69%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:14:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 96]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from 'void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:14:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of 'void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 96]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int ii=0; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int jj=0; jj<= _histogram->getLength2(); jj++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] for(int ii=1; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of 'void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 96]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1057:5: required from 'void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 96; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<96>::SuperKmer]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1048:8: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 96]::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]': /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >, std::allocator > > >::iterator' {aka '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 96]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 96]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > > >, std::allocator > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 96]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > > >, std::allocator > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > >::iterator' {aka '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::buildNode_visitor::operator()(const gatb::core::debruijn::impl::GraphData&) const [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 69%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<4>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<4>&}; _Tp = gatb::core::tools::math::LargeInt<4>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 128]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<4>]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<4>]': /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 binary_search(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.hpp:38, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:50, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp: In member function 'bool gatb::core::tools::collections::impl::ContainerSet::contains(const Item&) [with Item = gatb::core::tools::math::LargeInt<4>]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp:69:35: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 return std::binary_search (_items.begin(), _items.end(), item); ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:7: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function 'void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateIncomingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<128>::Count, gatb::core::tools::math::LargeInt<4> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function 'void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateOutgoingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<128>::Count, gatb::core::tools::math::LargeInt<4> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 69%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<1>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 32]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 70%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp [ 70%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<1>]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ [ 71%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<2>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<2>&}; _Tp = gatb::core::tools::math::LargeInt<2>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 64]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<2>]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > > >, std::allocator > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > > >, std::allocator > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt8'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: 'class gatb::core::tools::math::NativeInt8' declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::buildNode_visitor::operator()(const gatb::core::debruijn::impl::GraphData&) const [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::buildNode_visitor::operator()(const gatb::core::debruijn::impl::GraphData&) const [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<3>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<3>&}; _Tp = gatb::core::tools::math::LargeInt<3>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 96]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function 'gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<3>]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<3>]': /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 binary_search(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.hpp:38, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:50, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp: In member function 'bool gatb::core::tools::collections::impl::ContainerSet::contains(const Item&) [with Item = gatb::core::tools::math::LargeInt<3>]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp:69:35: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 return std::binary_search (_items.begin(), _items.end(), item); ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:7: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function 'void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<96>::Count; Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<96>::Count, gatb::core::tools::math::LargeInt<3> >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ [ 72%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of 'void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 128; Abundance_t = unsigned char; NodeState_t = unsigned char]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:13:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:311:21: warning: unused variable 'abundance' [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ [ 72%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of 'void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 32; Abundance_t = unsigned char; NodeState_t = unsigned char]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:13:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:311:21: warning: unused variable 'abundance' [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ [ 72%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of 'void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 64; Abundance_t = unsigned char; NodeState_t = unsigned char]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:13:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:311:21: warning: unused variable 'abundance' [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ [ 72%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp [ 73%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 75%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of 'void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 96; Abundance_t = unsigned char; NodeState_t = unsigned char]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:13:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:311:21: warning: unused variable 'abundance' [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 [ 75%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<128>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<32>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ [ 75%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp [ 76%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<64>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<96>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_128.cpp [ 76%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_32.cpp [ 77%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_64.cpp [ 77%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_96.cpp [ 78%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp [ 79%] Linking CXX static library ../lib/None/libgatbcore.a cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -P CMakeFiles/gatbcore-static.dir/cmake_clean_target.cmake cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/gatbcore-static.dir/link.txt --verbose=1 /usr/bin/ar qc ../lib/None/libgatbcore.a CMakeFiles/gatbcore-static.dir/gatb/bank/impl/Bank.cpp.o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bcalm_algo.cpp.o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bglue_algo.cpp.o 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CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Histogram.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/OptionsParser.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Progress.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Property.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tokenizer.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tool.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/XmlReader.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/Storage.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/StorageTools.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /usr/bin/ranlib ../lib/None/libgatbcore.a In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 make[4]: Leaving directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' [ 79%] Built target gatbcore-static make -f test/unit/CMakeFiles/gatb-core-cppunit.dir/build.make test/unit/CMakeFiles/gatb-core-cppunit.dir/depend make[4]: Entering directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit/CMakeFiles/gatb-core-cppunit.dir/DependInfo.cmake --color= Scanning dependencies of target gatb-core-cppunit make[4]: Leaving directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' make -f test/unit/CMakeFiles/gatb-core-cppunit.dir/build.make test/unit/CMakeFiles/gatb-core-cppunit.dir/build make[4]: Entering directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' [ 79%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bank/TestBank.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestBank.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp: In member function 'void gatb::tests::TestBank::bank_checkSample1_aux(const string&, gatb::core::bank::impl::BankFasta::Iterator::CommentMode_e)': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp:118:47: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=] snprintf (buffer, sizeof(buffer), "seq%ld%s", i+1, (mode == BankFasta::Iterator::FULL ? " generic" : "")); ^~~~~~~~~~ ~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp: In member function 'void gatb::tests::TestBank::bank_checkSample2_aux(const string&)': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp:187:47: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=] snprintf (buffer, sizeof(buffer), "seq%ld", nbSeq+1); ^~~~~~~~ ~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp: In member function 'void gatb::tests::TestBank::bank_perf1()': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp:678:17: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'u_int64_t' {aka 'long long unsigned int'} [-Wformat=] printf ("size=%ld time=%ld => rate=%.3f MB/s \n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ totalSize, t1-t0, ~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/bank/TestBank.cpp:678:17: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'gatb::core::system::ITime::Value' {aka 'long long unsigned int'} [-Wformat=] In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:7: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ [ 80%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bank/TestLeon.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestLeon.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/bank/TestLeon.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/bank/TestLeon.cpp:32: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 80%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bank/TestSequence.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestSequence.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/bank/TestSequence.cpp In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 81%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bcalm/TestBcalm.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/bcalm/TestBcalm.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/bcalm/TestBcalm.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 [ 81%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijn.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijn.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/debruijn/TestDebruijn.cpp In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/debruijn/TestDebruijn.cpp:33: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 32; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 81%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 81%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijnUnitigs.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijnUnitigs.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/debruijn/TestDebruijnUnitigs.cpp In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:7: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/debruijn/TestDebruijnUnitigs.cpp:33: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 32; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 82%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplifications.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplifications.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/debruijn/TestSimplifications.cpp /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/debruijn/TestSimplifications.cpp:33: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ [ 82%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplificationsUnitigs.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplificationsUnitigs.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/debruijn/TestSimplificationsUnitigs.cpp In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.hpp:27, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/debruijn/TestSimplificationsUnitigs.cpp:33: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 [ 83%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDSK.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDSK.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/kmer/TestDSK.cpp In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 84%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 84%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDebloom.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDebloom.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/kmer/TestDebloom.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/kmer/TestDebloom.cpp:25: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/kmer/TestDebloom.cpp:25: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:7: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/set:60, from /usr/include/cppunit/extensions/TestFactoryRegistry.h:11, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/kmer/TestDebloom.cpp:19: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /usr/include/cppunit/XmlOutputter.h:13, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/kmer/TestDebloom.cpp:19: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ [ 84%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmer.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmer.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/kmer/TestKmer.cpp In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmerBank.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmerBank.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/kmer/TestKmerBank.cpp In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 85%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestMPHF.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestMPHF.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/kmer/TestMPHF.cpp [ 86%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/main.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/main.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/main.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/kmer/TestMPHF.cpp:27: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 86%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/system/TestSystem.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/system/TestSystem.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/system/TestSystem.cpp In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:7: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ [ 86%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestBag.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestBag.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/tools/collections/TestBag.cpp [ 87%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestCollection.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestCollection.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/tools/collections/TestCollection.cpp [ 87%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestContainer.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestContainer.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/tools/collections/TestContainer.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /usr/include/cppunit/extensions/TestFactoryRegistry.h:11, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/tools/collections/TestCollection.cpp:19: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /usr/include/cppunit/XmlOutputter.h:13, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/tools/collections/TestCollection.cpp:19: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::Count, std::allocator::Count> >::iterator' {aka '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function 'T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 88%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestIterable.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestIterable.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/tools/collections/TestIterable.cpp [ 88%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestMap.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestMap.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/tools/collections/TestMap.cpp [ 88%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/designpattern/TestIterators.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/designpattern/TestIterators.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/tools/designpattern/TestIterators.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/tools/collections/TestMap.cpp:24: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 89%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/math/TestMath.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/math/TestMath.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/tools/math/TestMath.cpp [ 89%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/misc/TestMisc.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/misc/TestMisc.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/tools/misc/TestMisc.cpp [ 89%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type' {aka 'unsigned int'} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:18:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set > >, std::less > > >, std::allocator > > > >::size_type' {aka 'unsigned int'} [-Wformat=] [ 90%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/storage/TestStorage.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/storage/TestStorage.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/tools/storage/TestStorage.cpp In file included from /usr/include/c++/8/vector:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_algobase.h: In function '_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<4>; _Compare = __gnu_cxx::__ops::_Iter_less_val]': /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __lower_bound(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_algobase.h: In member function 'int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::LargeInt<4>; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h: In member function 'void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Edge&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h: In member function 'void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Node&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 make -f tools/CMakeFiles/dbginfo.dir/build.make tools/CMakeFiles/dbginfo.dir/depend make[4]: Entering directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/tools /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/tools /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/tools/CMakeFiles/dbginfo.dir/DependInfo.cmake --color= /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 Scanning dependencies of target dbginfo make[4]: Leaving directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' make -f tools/CMakeFiles/dbginfo.dir/build.make tools/CMakeFiles/dbginfo.dir/build make[4]: Entering directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' [ 91%] Building CXX object tools/CMakeFiles/dbginfo.dir/dbginfo.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/tools && /usr/bin/c++ -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/dbginfo.dir/dbginfo.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/tools/dbginfo.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/tools/storage/TestStorage.cpp:23: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'class gatb::core::tools::math::NativeInt64'; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/tools/storage/TestStorage.cpp:31: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: 'class gatb::core::tools::math::NativeInt64' declared here class NativeInt64 ^~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<4>&}; _Tp = gatb::core::tools::math::LargeInt<4>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/tools/dbginfo.cpp:20: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque > >, std::allocator > > > >::const_iterator' {aka 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ [ 91%] Linking CXX executable ../bin/None/dbginfo cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/dbginfo.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/dbginfo.dir/dbginfo.cpp.o -o ../bin/None/dbginfo -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial: ../lib/None/libgatbcore.a -ldl -lpthread -lz /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm In file included from /usr/include/c++/8/set:60, from /usr/include/cppunit/extensions/TestFactoryRegistry.h:11, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:24, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/tools/storage/TestStorage.cpp:19: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /usr/include/cppunit/XmlOutputter.h:13, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/CppunitCommon.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/test/unit/src/tools/storage/TestStorage.cpp:19: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 91%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type' {aka 'unsigned int'} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:18:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set > >, std::less > > >, std::allocator > > > >::size_type' {aka 'unsigned int'} [-Wformat=] /usr/bin/ld: ../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_128.cpp.o):(.rodata+0x4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../lib/None/libgatbcore.a(Simplifications.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_128.cpp.o):(.data.rel.ro+0x8): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../lib/None/libgatbcore.a(Simplifications.cpp.o):(.data.rel.ro+0x0): first defined here collect2: error: ld returned 1 exit status make[4]: *** [tools/CMakeFiles/dbginfo.dir/build.make:94: bin/None/dbginfo] Error 1 make[4]: Leaving directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' make[3]: *** [CMakeFiles/Makefile2:617: tools/CMakeFiles/dbginfo.dir/all] Error 2 make[3]: *** Waiting for unfinished jobs.... [ 92%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp [ 92%] Linking CXX executable ../../bin/None/gatb-core-cppunit cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/test/unit && /usr/bin/cmake -E cmake_link_script CMakeFiles/gatb-core-cppunit.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/gatb-core-cppunit.dir/src/bank/TestBank.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestLeon.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestSequence.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/bcalm/TestBcalm.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijn.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijnUnitigs.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplifications.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplificationsUnitigs.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDSK.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDebloom.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmer.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmerBank.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestMPHF.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/main.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/system/TestSystem.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestBag.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestCollection.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestContainer.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestIterable.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestMap.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/designpattern/TestIterators.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/math/TestMath.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/misc/TestMisc.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/storage/TestStorage.cpp.o -o ../../bin/None/gatb-core-cppunit -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial: ../../lib/None/libgatbcore.a -ldl -lpthread -lz /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lcppunit In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type' {aka 'unsigned int'} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:18:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set > >, std::less > > >, std::allocator > > > >::size_type' {aka 'unsigned int'} [-Wformat=] In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque > >, std::allocator > > > >::const_iterator' {aka 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x1b0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x1b0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0xc): multiple definition of `typeinfo for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0xc): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x368): multiple definition of `typeinfo name for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x368): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x18): multiple definition of `typeinfo for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x18): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x520): multiple definition of `typeinfo name for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x520): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x24): multiple definition of `typeinfo for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x24): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x6d4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x30): multiple definition of `typeinfo for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0x884): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x1b0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x3c): multiple definition of `typeinfo for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0xc): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0xa38): multiple definition of `typeinfo name for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x364): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x48): multiple definition of `typeinfo for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0x18): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_128.cpp.o):(.rodata+0x4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_128.cpp.o):(.data.rel.ro+0x8): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization8.cpp.in_32.cpp.o):(.rodata+0x314): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization8.cpp.in_32.cpp.o):(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_32.cpp.o):(.rodata+0x4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization7.cpp.in_32.cpp.o):(.data.rel.ro+0x8): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; ../../lib/None/libgatbcore.a(Simplifications.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x1b0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x1b0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0xc): multiple definition of `typeinfo for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0xc): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x368): multiple definition of `typeinfo name for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x368): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x18): multiple definition of `typeinfo for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x18): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x520): multiple definition of `typeinfo name for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.rodata+0x520): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x24): multiple definition of `typeinfo for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Traversal.cpp.o):(.data.rel.ro+0x24): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x6d4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x30): multiple definition of `typeinfo for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0x0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0x884): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x1b0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x3c): multiple definition of `typeinfo for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0xc): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0xa38): multiple definition of `typeinfo name for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.rodata+0x364): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x48): multiple definition of `typeinfo for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(Terminator.cpp.o):(.data.rel.ro+0x18): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0xbf0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0xbf0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x54): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x54): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0xda0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineBranchingTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0xda0): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x5c): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineBranchingTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x5c): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.rodata+0xf58): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineReachableTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.rodata+0xf58): first defined here /usr/bin/ld: ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_32.cpp.o):(.data.rel.ro+0x68): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineReachableTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; ../../lib/None/libgatbcore.a(TemplateSpecialization6.cpp.in_128.cpp.o):(.data.rel.ro+0x68): first defined here collect2: error: ld returned 1 exit status make[4]: *** [test/unit/CMakeFiles/gatb-core-cppunit.dir/build.make:440: bin/None/gatb-core-cppunit] Error 1 make[4]: Leaving directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' make[3]: *** [CMakeFiles/Makefile2:338: test/unit/CMakeFiles/gatb-core-cppunit.dir/all] Error 2 [ 92%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<2>&}; _Tp = gatb::core::tools::math::LargeInt<2>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque > >, std::allocator > > > >::const_iterator' {aka 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type' {aka 'unsigned int'} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of 'bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:18:16: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::set > >, std::less > > >, std::allocator > > > >::size_type' {aka 'unsigned int'} [-Wformat=] [ 93%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp In file included from /usr/include/c++/8/vector:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_algobase.h: In function '_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<3>; _Compare = __gnu_cxx::__ops::_Iter_less_val]': /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __lower_bound(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_algobase.h: In member function 'int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::LargeInt<3>; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h: In member function 'void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Edge&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h: In member function 'void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Node&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In function 'std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<3>&}; _Tp = gatb::core::tools::math::LargeInt<3>; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function 'std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type 'std::deque > >, std::allocator > > > >::const_iterator' {aka 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>'} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type 'std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>' changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function 'std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]': /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >' changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ [ 93%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > > >, std::allocator > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > > >, std::allocator > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::buildNode_visitor::operator()(const gatb::core::debruijn::impl::GraphData&) const [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > > >, std::allocator > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::buildNode_visitor::operator()(const gatb::core::debruijn::impl::GraphData&) const [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ [ 94%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 94%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<128>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<128>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<96>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<96>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<64>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<64>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of 'gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from 'gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]' /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct gatb::core::kmer::impl::Kmer<>::Count' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: 'struct gatb::core::kmer::impl::Kmer<>::Count' declared here struct Count : tools::misc::Abundance ^~~~~ [ 95%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 128]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<128>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 32]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 95%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > >, std::allocator > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, json::JSON> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<32>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector > > >, std::allocator > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]': /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 95%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::buildNode_visitor::operator()(const gatb::core::debruijn::impl::GraphData&) const [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function 'Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type 'gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed' changed in GCC 7.1 In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function 'void boomphf::bitVector::print() const': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'std::vector::size_type' {aka 'unsigned int'} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h: In member function 'std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]': /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 64]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set > >, std::less > > >, std::allocator > > > >::iterator' {aka 'std::_Rb_tree_const_iterator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<64>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 96]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 96%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_128.cpp [ 96%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_32.cpp [ 97%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_64.cpp [ 97%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o -c /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_96.cpp In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator' {aka '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector, std::allocator > >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:2: /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function 'std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type 'std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator' {aka 'std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<96>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function 'void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function 'void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]': /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type 'std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator' {aka 'std::__detail::_Node_const_iterator, std::pair > >, false, true>'} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ [ 97%] Linking CXX shared library ../lib/None/libgatbcore.so cd /build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/gatbcore-dynamic.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libgatbcore.so.2 -o ../lib/None/libgatbcore.so.2 CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/Bank.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankAlbum.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankBinary.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankFasta.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankHelpers.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankRandom.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankSplitter.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bcalm_algo.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bglue_algo.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/logging.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/ograph.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Graph.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/LinkTigs.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomBuilder.cpp.o 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CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemMacos.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/System.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/SystemInfoCommon.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadLinux.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadMacos.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/collections/impl/Bloom.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/DnaCoder.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/HeaderCoder.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/Leon.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/RangeCoder.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Command.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Observer.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/api/Data.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Algorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Histogram.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/OptionsParser.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Progress.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Property.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/TimeInfo.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tokenizer.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tool.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/XmlReader.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/Storage.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/StorageTools.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o 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CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o:(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o:(.rodata+0x314): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o:(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; 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CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o:(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o:(.rodata+0x314): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o:(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.data.rel.ro+0x0): first defined here collect2: error: ld returned 1 exit status make[4]: *** [src/CMakeFiles/gatbcore-dynamic.dir/build.make:1602: lib/None/libgatbcore.so.2] Error 1 make[4]: Leaving directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' make[3]: *** [CMakeFiles/Makefile2:192: src/CMakeFiles/gatbcore-dynamic.dir/all] Error 2 make[3]: Leaving directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' make[2]: *** [Makefile:155: all] Error 2 make[2]: Leaving directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' dh_auto_build: cd obj-arm-linux-gnueabihf && make -j3 "INSTALL=install --strip-program=true" returned exit code 2 make[1]: *** [debian/rules:13: override_dh_auto_build-arch] Error 2 make[1]: Leaving directory '/build/gatb-core-1.4.1+git20181225.44d5a44+dfsg' make: *** [debian/rules:10: build] Error 2 dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2 I: copying local configuration E: Failed autobuilding of package I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/32662 and its subdirectories