I: pbuilder: network access will be disabled during build I: Current time: Sat Sep 19 13:28:30 +14 2020 I: pbuilder-time-stamp: 1600471710 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libghemical_3.0.0-4.2.dsc] I: copying [./libghemical_3.0.0.orig.tar.gz] I: copying [./libghemical_3.0.0-4.2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Thu Apr 19 10:26:09 2018 +14 gpgv: using RSA key 82383CE9165B347C787081A2CBE6BB4E5D9AD3A5 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libghemical_3.0.0-4.2.dsc dpkg-source: info: extracting libghemical in libghemical-3.0.0 dpkg-source: info: unpacking libghemical_3.0.0.orig.tar.gz dpkg-source: info: unpacking libghemical_3.0.0-4.2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix-underlinking.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/15080/tmp/hooks/D01_modify_environment starting debug: Running on ff2a. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/15080/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/15080/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="0" [2]="3" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") BASH_VERSION='5.0.3(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=armhf DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4' DIRSTACK=() DISTRIBUTION= EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=arm HOST_ARCH=armhf IFS=' ' INVOCATION_ID=e7c510afe0624477980903ce61c96e91 LANG=C LANGUAGE=it_CH:it LC_ALL=C MACHTYPE=arm-unknown-linux-gnueabihf MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnueabihf PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=15080 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.h33w8wvGQO/pbuilderrc_qgkx --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.h33w8wvGQO/b2 --logfile b2/build.log libghemical_3.0.0-4.2.dsc' SUDO_GID=114 SUDO_UID=109 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://10.0.0.15:8000/ I: uname -a Linux i-capture-the-hostname 4.19.0-10-armmp-lpae #1 SMP Debian 4.19.132-1 (2020-07-24) armv7l GNU/Linux I: ls -l /bin total 3328 -rwxr-xr-x 1 root root 767656 Apr 18 2019 bash -rwxr-xr-x 3 root root 26052 Jul 11 2019 bunzip2 -rwxr-xr-x 3 root root 26052 Jul 11 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 11 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 11 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 11 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 25 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 11 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 11 2019 bzgrep -rwxr-xr-x 3 root root 26052 Jul 11 2019 bzip2 -rwxr-xr-x 1 root root 9636 Jul 11 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 11 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 11 2019 bzmore -rwxr-xr-x 1 root root 22432 Mar 1 2019 cat -rwxr-xr-x 1 root root 38868 Mar 1 2019 chgrp -rwxr-xr-x 1 root root 38836 Mar 1 2019 chmod -rwxr-xr-x 1 root root 42972 Mar 1 2019 chown -rwxr-xr-x 1 root root 88376 Mar 1 2019 cp -rwxr-xr-x 1 root root 75516 Jan 18 2019 dash -rwxr-xr-x 1 root root 71648 Mar 1 2019 date -rwxr-xr-x 1 root root 51212 Mar 1 2019 dd -rwxr-xr-x 1 root root 55672 Mar 1 2019 df -rwxr-xr-x 1 root root 88444 Mar 1 2019 dir -rwxr-xr-x 1 root root 54872 Jan 10 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 27 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 27 2018 domainname -> hostname -rwxr-xr-x 1 root root 22364 Mar 1 2019 echo -rwxr-xr-x 1 root root 28 Jan 8 2019 egrep -rwxr-xr-x 1 root root 18260 Mar 1 2019 false -rwxr-xr-x 1 root root 28 Jan 8 2019 fgrep -rwxr-xr-x 1 root root 47356 Jan 10 2019 findmnt -rwsr-xr-x 1 root root 21980 Apr 23 09:38 fusermount -rwxr-xr-x 1 root root 124508 Jan 8 2019 grep -rwxr-xr-x 2 root root 2345 Jan 6 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 6 2019 gzexe -rwxr-xr-x 1 root root 64232 Jan 6 2019 gzip -rwxr-xr-x 1 root root 13784 Sep 27 2018 hostname -rwxr-xr-x 1 root root 43044 Mar 1 2019 ln -rwxr-xr-x 1 root root 34932 Jul 27 2018 login -rwxr-xr-x 1 root root 88444 Mar 1 2019 ls -rwxr-xr-x 1 root root 67036 Jan 10 2019 lsblk -rwxr-xr-x 1 root root 47168 Mar 1 2019 mkdir -rwxr-xr-x 1 root root 43040 Mar 1 2019 mknod -rwxr-xr-x 1 root root 26552 Mar 1 2019 mktemp -rwxr-xr-x 1 root root 26024 Jan 10 2019 more -rwsr-xr-x 1 root root 34268 Jan 10 2019 mount -rwxr-xr-x 1 root root 9688 Jan 10 2019 mountpoint -rwxr-xr-x 1 root root 84284 Mar 1 2019 mv lrwxrwxrwx 1 root root 8 Sep 27 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 15 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 22416 Mar 1 2019 pwd lrwxrwxrwx 1 root root 4 Apr 18 2019 rbash -> bash -rwxr-xr-x 1 root root 26504 Mar 1 2019 readlink -rwxr-xr-x 1 root root 42968 Mar 1 2019 rm -rwxr-xr-x 1 root root 26496 Mar 1 2019 rmdir -rwxr-xr-x 1 root root 14136 Jan 22 2019 run-parts -rwxr-xr-x 1 root root 76012 Dec 23 2018 sed lrwxrwxrwx 1 root root 4 Sep 19 13:28 sh -> bash lrwxrwxrwx 1 root root 4 Sep 14 22:30 sh.distrib -> dash -rwxr-xr-x 1 root root 22384 Mar 1 2019 sleep -rwxr-xr-x 1 root root 51124 Mar 1 2019 stty -rwsr-xr-x 1 root root 42472 Jan 10 2019 su -rwxr-xr-x 1 root root 22392 Mar 1 2019 sync -rwxr-xr-x 1 root root 283324 Apr 24 2019 tar -rwxr-xr-x 1 root root 9808 Jan 22 2019 tempfile -rwxr-xr-x 1 root root 63464 Mar 1 2019 touch -rwxr-xr-x 1 root root 18260 Mar 1 2019 true -rwxr-xr-x 1 root root 9636 Apr 23 09:38 ulockmgr_server -rwsr-xr-x 1 root root 21976 Jan 10 2019 umount -rwxr-xr-x 1 root root 22380 Mar 1 2019 uname -rwxr-xr-x 2 root root 2345 Jan 6 2019 uncompress -rwxr-xr-x 1 root root 88444 Mar 1 2019 vdir -rwxr-xr-x 1 root root 21980 Jan 10 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 22 2019 which lrwxrwxrwx 1 root root 8 Sep 27 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 6 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 6 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 6 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 6 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 6 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 6 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 6 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 6 2019 zless -rwxr-xr-x 1 root root 1841 Jan 6 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 6 2019 znew I: user script /srv/workspace/pbuilder/15080/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 7.0.50~), gfortran, flex, intltool (>= 0.40.0), pkg-config (>= 0.9.0), libblas-dev, liblapack-dev, libmopac7-dev (>= 1.14), libsc-dev (>= 2.3.1-2), mesa-common-dev, dh-autoreconf, libglib2.0-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 18932 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 7.0.50~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. pbuilder-satisfydepends-dummy depends on flex; however: Package flex is not installed. pbuilder-satisfydepends-dummy depends on intltool (>= 0.40.0); however: Package intltool is not installed. pbuilder-satisfydepends-dummy depends on pkg-config (>= 0.9.0); however: Package pkg-config is not installed. pbuilder-satisfydepends-dummy depends on libblas-dev; however: Package libblas-dev is not installed. pbuilder-satisfydepends-dummy depends on liblapack-dev; however: Package liblapack-dev is not installed. pbuilder-satisfydepends-dummy depends on libmopac7-dev (>= 1.14); however: Package libmopac7-dev is not installed. pbuilder-satisfydepends-dummy depends on libsc-dev (>= 2.3.1-2); however: Package libsc-dev is not installed. pbuilder-satisfydepends-dummy depends on mesa-common-dev; however: Package mesa-common-dev is not installed. pbuilder-satisfydepends-dummy depends on dh-autoreconf; however: Package dh-autoreconf is not installed. pbuilder-satisfydepends-dummy depends on libglib2.0-dev; however: Package libglib2.0-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} flex{a} gettext{a} gettext-base{a} gfortran{a} gfortran-8{a} groff-base{a} ibverbs-providers{a} intltool{a} intltool-debian{a} libarchive-zip-perl{a} libblas-dev{a} libblas3{a} libblkid-dev{a} libbsd0{a} libcroco3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-dev{a} libdrm-etnaviv1{a} libdrm-exynos1{a} libdrm-freedreno1{a} libdrm-nouveau2{a} libdrm-omap1{a} libdrm-radeon1{a} libdrm-tegra0{a} libdrm2{a} libedit2{a} libelf1{a} libencode-locale-perl{a} libevent-2.1-6{a} libevent-core-2.1-6{a} libevent-pthreads-2.1-6{a} libexpat1{a} libffi-dev{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libgfortran-8-dev{a} libgfortran5{a} libglib2.0-0{a} libglib2.0-bin{a} libglib2.0-data{a} libglib2.0-dev{a} libglib2.0-dev-bin{a} libgssapi-krb5-2{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc5{a} libibverbs-dev{a} libibverbs1{a} libicu63{a} libint1{a} libio-html-perl{a} libio-socket-ssl-perl{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libltdl-dev{a} libltdl7{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1{a} libmopac7-1gf{a} libmopac7-dev{a} libmount-dev{a} libmpdec2{a} libncurses6{a} libnet-http-perl{a} libnet-ssleay-perl{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libopenmpi-dev{a} libopenmpi3{a} libpciaccess0{a} libpcre16-3{a} libpcre3-dev{a} libpcre32-3{a} libpcrecpp0v5{a} libpipeline1{a} libpmix2{a} libpthread-stubs0-dev{a} libpython3-stdlib{a} libpython3.7-minimal{a} libpython3.7-stdlib{a} libreadline7{a} libsc-data{a} libsc-dev{a} libsc7v5{a} libselinux1-dev{a} libsepol1-dev{a} libsigsegv2{a} libssl1.1{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libwww-perl{a} libwww-robotrules-perl{a} libx11-6{a} libx11-data{a} libx11-dev{a} libxau-dev{a} libxau6{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxml-parser-perl{a} libxml2{a} m4{a} man-db{a} mesa-common-dev{a} mime-support{a} mpi-default-dev{a} netbase{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} openssl{a} perl-openssl-defaults{a} pkg-config{a} po-debconf{a} python3{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3.7{a} python3.7-minimal{a} readline-common{a} sensible-utils{a} uuid-dev{a} x11proto-core-dev{a} x11proto-dev{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl krb5-locales libarchive-cpio-perl libcoarrays-openmpi-dev libdata-dump-perl libfl-dev libgpm2 libhtml-form-perl libhtml-format-perl libhttp-daemon-perl libmail-sendmail-perl libmailtools-perl lynx shared-mime-info wget xauth xdg-user-dirs 0 packages upgraded, 161 newly installed, 0 to remove and 0 not upgraded. Need to get 61.3 MB of archives. After unpacking 207 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main armhf libbsd0 armhf 0.9.1-2 [103 kB] Get: 2 http://deb.debian.org/debian buster/main armhf bsdmainutils armhf 11.1.2+b1 [186 kB] Get: 3 http://deb.debian.org/debian buster/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB] Get: 4 http://deb.debian.org/debian buster/main armhf groff-base armhf 1.22.4-3 [828 kB] Get: 5 http://deb.debian.org/debian buster/main armhf libpipeline1 armhf 1.5.1-2 [26.8 kB] Get: 6 http://deb.debian.org/debian buster/main armhf man-db armhf 2.8.5-2 [1240 kB] Get: 7 http://deb.debian.org/debian buster/main armhf libsigsegv2 armhf 2.12-2 [32.1 kB] Get: 8 http://deb.debian.org/debian buster/main armhf m4 armhf 1.4.18-2 [190 kB] Get: 9 http://deb.debian.org/debian buster/main armhf flex armhf 2.6.4-6.2 [438 kB] Get: 10 http://deb.debian.org/debian buster/main armhf libssl1.1 armhf 1.1.1d-0+deb10u3 [1299 kB] Get: 11 http://deb.debian.org/debian buster/main armhf libpython3.7-minimal armhf 3.7.3-2+deb10u2 [582 kB] Get: 12 http://deb.debian.org/debian buster/main armhf libexpat1 armhf 2.2.6-2+deb10u1 [78.0 kB] Get: 13 http://deb.debian.org/debian buster/main armhf python3.7-minimal armhf 3.7.3-2+deb10u2 [1466 kB] Get: 14 http://deb.debian.org/debian buster/main armhf python3-minimal armhf 3.7.3-1 [36.6 kB] Get: 15 http://deb.debian.org/debian buster/main armhf mime-support all 3.62 [37.2 kB] Get: 16 http://deb.debian.org/debian buster/main armhf libmpdec2 armhf 2.4.2-2 [69.3 kB] Get: 17 http://deb.debian.org/debian buster/main armhf readline-common all 7.0-5 [70.6 kB] Get: 18 http://deb.debian.org/debian buster/main armhf libreadline7 armhf 7.0-5 [131 kB] Get: 19 http://deb.debian.org/debian buster/main armhf libpython3.7-stdlib armhf 3.7.3-2+deb10u2 [1660 kB] Get: 20 http://deb.debian.org/debian buster/main armhf python3.7 armhf 3.7.3-2+deb10u2 [330 kB] Get: 21 http://deb.debian.org/debian buster/main armhf libpython3-stdlib armhf 3.7.3-1 [20.0 kB] Get: 22 http://deb.debian.org/debian buster/main armhf python3 armhf 3.7.3-1 [61.5 kB] Get: 23 http://deb.debian.org/debian buster/main armhf netbase all 5.6 [19.4 kB] Get: 24 http://deb.debian.org/debian buster/main armhf sensible-utils all 0.0.12 [15.8 kB] Get: 25 http://deb.debian.org/debian buster/main armhf libmagic-mgc armhf 1:5.35-4+deb10u1 [242 kB] Get: 26 http://deb.debian.org/debian buster/main armhf libmagic1 armhf 1:5.35-4+deb10u1 [110 kB] Get: 27 http://deb.debian.org/debian buster/main armhf file armhf 1:5.35-4+deb10u1 [65.5 kB] Get: 28 http://deb.debian.org/debian buster/main armhf gettext-base armhf 0.19.8.1-9 [118 kB] Get: 29 http://deb.debian.org/debian buster/main armhf libedit2 armhf 3.1-20181209-1 [79.5 kB] Get: 30 http://deb.debian.org/debian buster/main armhf libkeyutils1 armhf 1.6-6 [13.9 kB] Get: 31 http://deb.debian.org/debian buster/main armhf libkrb5support0 armhf 1.17-3 [62.3 kB] Get: 32 http://deb.debian.org/debian buster/main armhf libk5crypto3 armhf 1.17-3 [119 kB] Get: 33 http://deb.debian.org/debian buster/main armhf libkrb5-3 armhf 1.17-3 [323 kB] Get: 34 http://deb.debian.org/debian buster/main armhf libgssapi-krb5-2 armhf 1.17-3 [137 kB] Get: 35 http://deb.debian.org/debian buster/main armhf openssh-client armhf 1:7.9p1-10+deb10u2 [704 kB] Get: 36 http://deb.debian.org/debian buster/main armhf autoconf all 2.69-11 [341 kB] Get: 37 http://deb.debian.org/debian buster/main armhf autotools-dev all 20180224.1 [77.0 kB] Get: 38 http://deb.debian.org/debian buster/main armhf automake all 1:1.16.1-4 [771 kB] Get: 39 http://deb.debian.org/debian buster/main armhf autopoint all 0.19.8.1-9 [434 kB] Get: 40 http://deb.debian.org/debian buster/main armhf openssl armhf 1.1.1d-0+deb10u3 [818 kB] Get: 41 http://deb.debian.org/debian buster/main armhf ca-certificates all 20190110 [157 kB] Get: 42 http://deb.debian.org/debian buster/main armhf libtool all 2.4.6-9 [547 kB] Get: 43 http://deb.debian.org/debian buster/main armhf dh-autoreconf all 19 [16.9 kB] Get: 44 http://deb.debian.org/debian buster/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 45 http://deb.debian.org/debian buster/main armhf libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 46 http://deb.debian.org/debian buster/main armhf dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 47 http://deb.debian.org/debian buster/main armhf libelf1 armhf 0.176-1.1 [158 kB] Get: 48 http://deb.debian.org/debian buster/main armhf dwz armhf 0.12-3 [72.0 kB] Get: 49 http://deb.debian.org/debian buster/main armhf libglib2.0-0 armhf 2.58.3-2+deb10u2 [1101 kB] Get: 50 http://deb.debian.org/debian buster/main armhf libicu63 armhf 63.1-6+deb10u1 [8005 kB] Get: 51 http://deb.debian.org/debian buster/main armhf libxml2 armhf 2.9.4+dfsg1-7+b3 [595 kB] Get: 52 http://deb.debian.org/debian buster/main armhf libcroco3 armhf 0.6.12-3 [133 kB] Get: 53 http://deb.debian.org/debian buster/main armhf libncurses6 armhf 6.1+20181013-2+deb10u2 [79.8 kB] Get: 54 http://deb.debian.org/debian buster/main armhf gettext armhf 0.19.8.1-9 [1242 kB] Get: 55 http://deb.debian.org/debian buster/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 56 http://deb.debian.org/debian buster/main armhf po-debconf all 1.0.21 [248 kB] Get: 57 http://deb.debian.org/debian buster/main armhf debhelper all 12.1.1 [1016 kB] Get: 58 http://deb.debian.org/debian buster/main armhf libgfortran5 armhf 8.3.0-6 [213 kB] Get: 59 http://deb.debian.org/debian buster/main armhf libgfortran-8-dev armhf 8.3.0-6 [260 kB] Get: 60 http://deb.debian.org/debian buster/main armhf gfortran-8 armhf 8.3.0-6 [7219 kB] Get: 61 http://deb.debian.org/debian buster/main armhf gfortran armhf 4:8.3.0-1 [1424 B] Get: 62 http://deb.debian.org/debian buster/main armhf libnl-3-200 armhf 3.4.0-1 [55.6 kB] Get: 63 http://deb.debian.org/debian buster/main armhf libnl-route-3-200 armhf 3.4.0-1 [136 kB] Get: 64 http://deb.debian.org/debian buster/main armhf libibverbs1 armhf 22.1-1 [44.1 kB] Get: 65 http://deb.debian.org/debian buster/main armhf ibverbs-providers armhf 22.1-1 [20.2 kB] Get: 66 http://deb.debian.org/debian buster/main armhf liburi-perl all 1.76-1 [89.9 kB] Get: 67 http://deb.debian.org/debian buster/main armhf libencode-locale-perl all 1.05-1 [13.7 kB] Get: 68 http://deb.debian.org/debian buster/main armhf libtimedate-perl all 2.3000-2+deb10u1 [38.1 kB] Get: 69 http://deb.debian.org/debian buster/main armhf libhttp-date-perl all 6.02-1 [10.7 kB] Get: 70 http://deb.debian.org/debian buster/main armhf libfile-listing-perl all 6.04-1 [10.3 kB] Get: 71 http://deb.debian.org/debian buster/main armhf libhtml-tagset-perl all 3.20-3 [12.7 kB] Get: 72 http://deb.debian.org/debian buster/main armhf libhtml-parser-perl armhf 3.72-3+b3 [102 kB] Get: 73 http://deb.debian.org/debian buster/main armhf libhtml-tree-perl all 5.07-2 [213 kB] Get: 74 http://deb.debian.org/debian buster/main armhf libio-html-perl all 1.001-1 [17.6 kB] Get: 75 http://deb.debian.org/debian buster/main armhf liblwp-mediatypes-perl all 6.02-1 [22.1 kB] Get: 76 http://deb.debian.org/debian buster/main armhf libhttp-message-perl all 6.18-1 [77.8 kB] Get: 77 http://deb.debian.org/debian buster/main armhf libhttp-cookies-perl all 6.04-1 [17.8 kB] Get: 78 http://deb.debian.org/debian buster/main armhf libhttp-negotiate-perl all 6.01-1 [12.8 kB] Get: 79 http://deb.debian.org/debian buster/main armhf perl-openssl-defaults armhf 3 [6782 B] Get: 80 http://deb.debian.org/debian buster/main armhf libnet-ssleay-perl armhf 1.85-2+b1 [288 kB] Get: 81 http://deb.debian.org/debian buster/main armhf libio-socket-ssl-perl all 2.060-3 [207 kB] Get: 82 http://deb.debian.org/debian buster/main armhf libnet-http-perl all 6.18-1 [24.5 kB] Get: 83 http://deb.debian.org/debian buster/main armhf liblwp-protocol-https-perl all 6.07-2 [9242 B] Get: 84 http://deb.debian.org/debian buster/main armhf libtry-tiny-perl all 0.30-1 [23.3 kB] Get: 85 http://deb.debian.org/debian buster/main armhf libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 86 http://deb.debian.org/debian buster/main armhf libwww-perl all 6.36-2 [188 kB] Get: 87 http://deb.debian.org/debian buster/main armhf libxml-parser-perl armhf 2.44-4 [210 kB] Get: 88 http://deb.debian.org/debian buster/main armhf intltool all 0.51.0-5 [50.2 kB] Get: 89 http://deb.debian.org/debian buster/main armhf libblas3 armhf 3.8.0-2 [109 kB] Get: 90 http://deb.debian.org/debian buster/main armhf libblas-dev armhf 3.8.0-2 [117 kB] Get: 91 http://deb.debian.org/debian buster/main armhf uuid-dev armhf 2.33.1-0.1 [92.6 kB] Get: 92 http://deb.debian.org/debian buster/main armhf libblkid-dev armhf 2.33.1-0.1 [217 kB] Get: 93 http://deb.debian.org/debian buster/main armhf libdrm-common all 2.4.97-1 [13.8 kB] Get: 94 http://deb.debian.org/debian buster/main armhf libdrm2 armhf 2.4.97-1 [35.7 kB] Get: 95 http://deb.debian.org/debian buster/main armhf libdrm-amdgpu1 armhf 2.4.97-1 [25.8 kB] Get: 96 http://deb.debian.org/debian buster/main armhf libdrm-radeon1 armhf 2.4.97-1 [28.7 kB] Get: 97 http://deb.debian.org/debian buster/main armhf libdrm-nouveau2 armhf 2.4.97-1 [24.2 kB] Get: 98 http://deb.debian.org/debian buster/main armhf libdrm-omap1 armhf 2.4.97-1 [16.0 kB] Get: 99 http://deb.debian.org/debian buster/main armhf libdrm-freedreno1 armhf 2.4.97-1 [26.5 kB] Get: 100 http://deb.debian.org/debian buster/main armhf libdrm-exynos1 armhf 2.4.97-1 [19.0 kB] Get: 101 http://deb.debian.org/debian buster/main armhf libdrm-tegra0 armhf 2.4.97-1 [15.3 kB] Get: 102 http://deb.debian.org/debian buster/main armhf libdrm-etnaviv1 armhf 2.4.97-1 [19.7 kB] Get: 103 http://deb.debian.org/debian buster/main armhf libdrm-dev armhf 2.4.97-1 [139 kB] Get: 104 http://deb.debian.org/debian buster/main armhf libevent-2.1-6 armhf 2.1.8-stable-4 [159 kB] Get: 105 http://deb.debian.org/debian buster/main armhf libevent-core-2.1-6 armhf 2.1.8-stable-4 [118 kB] Get: 106 http://deb.debian.org/debian buster/main armhf libevent-pthreads-2.1-6 armhf 2.1.8-stable-4 [47.6 kB] Get: 107 http://deb.debian.org/debian buster/main armhf libffi-dev armhf 3.2.1-9 [154 kB] Get: 108 http://deb.debian.org/debian buster/main armhf libglib2.0-data all 2.58.3-2+deb10u2 [1110 kB] Get: 109 http://deb.debian.org/debian buster/main armhf libglib2.0-bin armhf 2.58.3-2+deb10u2 [119 kB] Get: 110 http://deb.debian.org/debian buster/main armhf python3-lib2to3 all 3.7.3-1 [76.7 kB] Get: 111 http://deb.debian.org/debian buster/main armhf python3-distutils all 3.7.3-1 [142 kB] Get: 112 http://deb.debian.org/debian buster/main armhf libglib2.0-dev-bin armhf 2.58.3-2+deb10u2 [155 kB] Get: 113 http://deb.debian.org/debian buster/main armhf libmount-dev armhf 2.33.1-0.1 [223 kB] Get: 114 http://deb.debian.org/debian buster/main armhf libpcre16-3 armhf 2:8.39-12 [238 kB] Get: 115 http://deb.debian.org/debian buster/main armhf libpcre32-3 armhf 2:8.39-12 [231 kB] Get: 116 http://deb.debian.org/debian buster/main armhf libpcrecpp0v5 armhf 2:8.39-12 [150 kB] Get: 117 http://deb.debian.org/debian buster/main armhf libpcre3-dev armhf 2:8.39-12 [585 kB] Get: 118 http://deb.debian.org/debian buster/main armhf libsepol1-dev armhf 2.8-1 [318 kB] Get: 119 http://deb.debian.org/debian buster/main armhf libselinux1-dev armhf 2.8-1+b1 [162 kB] Get: 120 http://deb.debian.org/debian buster/main armhf pkg-config armhf 0.29-6 [60.7 kB] Get: 121 http://deb.debian.org/debian buster/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1 [207 kB] Get: 122 http://deb.debian.org/debian buster/main armhf libglib2.0-dev armhf 2.58.3-2+deb10u2 [1386 kB] Get: 123 http://deb.debian.org/debian buster/main armhf libltdl7 armhf 2.4.6-9 [387 kB] Get: 124 http://deb.debian.org/debian buster/main armhf libhwloc5 armhf 1.11.12-3 [87.6 kB] Get: 125 http://deb.debian.org/debian buster/main armhf libltdl-dev armhf 2.4.6-9 [160 kB] Get: 126 http://deb.debian.org/debian buster/main armhf libhwloc-dev armhf 1.11.12-3 [153 kB] Get: 127 http://deb.debian.org/debian buster/main armhf libpciaccess0 armhf 0.14-1 [51.0 kB] Get: 128 http://deb.debian.org/debian buster/main armhf ocl-icd-libopencl1 armhf 2.2.12-2 [35.6 kB] Get: 129 http://deb.debian.org/debian buster/main armhf libhwloc-plugins armhf 1.11.12-3 [15.7 kB] Get: 130 http://deb.debian.org/debian buster/main armhf libnl-3-dev armhf 3.4.0-1 [96.9 kB] Get: 131 http://deb.debian.org/debian buster/main armhf libnl-route-3-dev armhf 3.4.0-1 [162 kB] Get: 132 http://deb.debian.org/debian buster/main armhf libibverbs-dev armhf 22.1-1 [151 kB] Get: 133 http://deb.debian.org/debian buster/main armhf libint1 armhf 1.2.1-2 [3625 kB] Get: 134 http://deb.debian.org/debian buster/main armhf liblapack3 armhf 3.8.0-2 [1631 kB] Get: 135 http://deb.debian.org/debian buster/main armhf liblapack-dev armhf 3.8.0-2 [1680 kB] Get: 136 http://deb.debian.org/debian buster/main armhf libmopac7-1gf armhf 1.15-6+b3 [466 kB] Get: 137 http://deb.debian.org/debian buster/main armhf libmopac7-dev armhf 1.15-6+b3 [538 kB] Get: 138 http://deb.debian.org/debian buster/main armhf libpmix2 armhf 3.1.2-3 [449 kB] Get: 139 http://deb.debian.org/debian buster/main armhf libopenmpi3 armhf 3.1.3-11 [1890 kB] Get: 140 http://deb.debian.org/debian buster/main armhf openmpi-common all 3.1.3-11 [165 kB] Get: 141 http://deb.debian.org/debian buster/main armhf openmpi-bin armhf 3.1.3-11 [198 kB] Get: 142 http://deb.debian.org/debian buster/main armhf libopenmpi-dev armhf 3.1.3-11 [964 kB] Get: 143 http://deb.debian.org/debian buster/main armhf libpthread-stubs0-dev armhf 0.4-1 [5344 B] Get: 144 http://deb.debian.org/debian buster/main armhf libsc-data all 2.3.1-19 [119 kB] Get: 145 http://deb.debian.org/debian buster/main armhf libsc7v5 armhf 2.3.1-19 [1742 kB] Get: 146 http://deb.debian.org/debian buster/main armhf mpi-default-dev armhf 1.13 [5476 B] Get: 147 http://deb.debian.org/debian buster/main armhf libsc-dev armhf 2.3.1-19 [265 kB] Get: 148 http://deb.debian.org/debian buster/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB] Get: 149 http://deb.debian.org/debian buster/main armhf libxdmcp6 armhf 1:1.1.2-3 [24.9 kB] Get: 150 http://deb.debian.org/debian buster/main armhf libxcb1 armhf 1.13.1-2 [132 kB] Get: 151 http://deb.debian.org/debian buster/main armhf libx11-data all 2:1.6.7-1 [298 kB] Get: 152 http://deb.debian.org/debian buster/main armhf libx11-6 armhf 2:1.6.7-1 [698 kB] Get: 153 http://deb.debian.org/debian buster/main armhf xorg-sgml-doctools all 1:1.11-1 [21.9 kB] Get: 154 http://deb.debian.org/debian buster/main armhf x11proto-dev all 2018.4-4 [251 kB] Get: 155 http://deb.debian.org/debian buster/main armhf x11proto-core-dev all 2018.4-4 [3128 B] Get: 156 http://deb.debian.org/debian buster/main armhf libxau-dev armhf 1:1.0.8-1+b2 [22.5 kB] Get: 157 http://deb.debian.org/debian buster/main armhf libxdmcp-dev armhf 1:1.1.2-3 [40.7 kB] Get: 158 http://deb.debian.org/debian buster/main armhf xtrans-dev all 1.3.5-1 [100 kB] Get: 159 http://deb.debian.org/debian buster/main armhf libxcb1-dev armhf 1.13.1-2 [171 kB] Get: 160 http://deb.debian.org/debian buster/main armhf libx11-dev armhf 2:1.6.7-1 [771 kB] Get: 161 http://deb.debian.org/debian buster/main armhf mesa-common-dev armhf 18.3.6-2+deb10u1 [611 kB] Fetched 61.3 MB in 7s (8795 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 18932 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_armhf.deb ... Unpacking libbsd0:armhf (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_armhf.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../02-libuchardet0_0.0.6-3_armhf.deb ... Unpacking libuchardet0:armhf (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_armhf.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../04-libpipeline1_1.5.1-2_armhf.deb ... Unpacking libpipeline1:armhf (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_armhf.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package libsigsegv2:armhf. Preparing to unpack .../06-libsigsegv2_2.12-2_armhf.deb ... Unpacking libsigsegv2:armhf (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../07-m4_1.4.18-2_armhf.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package flex. Preparing to unpack .../08-flex_2.6.4-6.2_armhf.deb ... Unpacking flex (2.6.4-6.2) ... Selecting previously unselected package libssl1.1:armhf. Preparing to unpack .../09-libssl1.1_1.1.1d-0+deb10u3_armhf.deb ... Unpacking libssl1.1:armhf (1.1.1d-0+deb10u3) ... Selecting previously unselected package libpython3.7-minimal:armhf. Preparing to unpack .../10-libpython3.7-minimal_3.7.3-2+deb10u2_armhf.deb ... Unpacking libpython3.7-minimal:armhf (3.7.3-2+deb10u2) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../11-libexpat1_2.2.6-2+deb10u1_armhf.deb ... Unpacking libexpat1:armhf (2.2.6-2+deb10u1) ... Selecting previously unselected package python3.7-minimal. Preparing to unpack .../12-python3.7-minimal_3.7.3-2+deb10u2_armhf.deb ... Unpacking python3.7-minimal (3.7.3-2+deb10u2) ... Setting up libssl1.1:armhf (1.1.1d-0+deb10u3) ... Setting up libpython3.7-minimal:armhf (3.7.3-2+deb10u2) ... Setting up libexpat1:armhf (2.2.6-2+deb10u1) ... Setting up python3.7-minimal (3.7.3-2+deb10u2) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19994 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.7.3-1_armhf.deb ... Unpacking python3-minimal (3.7.3-1) ... Selecting previously unselected package mime-support. Preparing to unpack .../1-mime-support_3.62_all.deb ... Unpacking mime-support (3.62) ... Selecting previously unselected package libmpdec2:armhf. Preparing to unpack .../2-libmpdec2_2.4.2-2_armhf.deb ... Unpacking libmpdec2:armhf (2.4.2-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../3-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package libreadline7:armhf. Preparing to unpack .../4-libreadline7_7.0-5_armhf.deb ... Unpacking libreadline7:armhf (7.0-5) ... Selecting previously unselected package libpython3.7-stdlib:armhf. Preparing to unpack .../5-libpython3.7-stdlib_3.7.3-2+deb10u2_armhf.deb ... Unpacking libpython3.7-stdlib:armhf (3.7.3-2+deb10u2) ... Selecting previously unselected package python3.7. Preparing to unpack .../6-python3.7_3.7.3-2+deb10u2_armhf.deb ... Unpacking python3.7 (3.7.3-2+deb10u2) ... Selecting previously unselected package libpython3-stdlib:armhf. Preparing to unpack .../7-libpython3-stdlib_3.7.3-1_armhf.deb ... Unpacking libpython3-stdlib:armhf (3.7.3-1) ... Setting up python3-minimal (3.7.3-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20455 files and directories currently installed.) Preparing to unpack .../000-python3_3.7.3-1_armhf.deb ... Unpacking python3 (3.7.3-1) ... Selecting previously unselected package netbase. Preparing to unpack .../001-netbase_5.6_all.deb ... Unpacking netbase (5.6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../002-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../003-libmagic-mgc_1%3a5.35-4+deb10u1_armhf.deb ... Unpacking libmagic-mgc (1:5.35-4+deb10u1) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../004-libmagic1_1%3a5.35-4+deb10u1_armhf.deb ... Unpacking libmagic1:armhf (1:5.35-4+deb10u1) ... Selecting previously unselected package file. Preparing to unpack .../005-file_1%3a5.35-4+deb10u1_armhf.deb ... Unpacking file (1:5.35-4+deb10u1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../006-gettext-base_0.19.8.1-9_armhf.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libedit2:armhf. Preparing to unpack .../007-libedit2_3.1-20181209-1_armhf.deb ... Unpacking libedit2:armhf (3.1-20181209-1) ... Selecting previously unselected package libkeyutils1:armhf. Preparing to unpack .../008-libkeyutils1_1.6-6_armhf.deb ... Unpacking libkeyutils1:armhf (1.6-6) ... Selecting previously unselected package libkrb5support0:armhf. Preparing to unpack .../009-libkrb5support0_1.17-3_armhf.deb ... Unpacking libkrb5support0:armhf (1.17-3) ... Selecting previously unselected package libk5crypto3:armhf. Preparing to unpack .../010-libk5crypto3_1.17-3_armhf.deb ... Unpacking libk5crypto3:armhf (1.17-3) ... Selecting previously unselected package libkrb5-3:armhf. Preparing to unpack .../011-libkrb5-3_1.17-3_armhf.deb ... Unpacking libkrb5-3:armhf (1.17-3) ... Selecting previously unselected package libgssapi-krb5-2:armhf. Preparing to unpack .../012-libgssapi-krb5-2_1.17-3_armhf.deb ... Unpacking libgssapi-krb5-2:armhf (1.17-3) ... Selecting previously unselected package openssh-client. Preparing to unpack .../013-openssh-client_1%3a7.9p1-10+deb10u2_armhf.deb ... Unpacking openssh-client (1:7.9p1-10+deb10u2) ... Selecting previously unselected package autoconf. Preparing to unpack .../014-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... 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Setting up libglib2.0-0:armhf (2.58.3-2+deb10u2) ... No schema files found: doing nothing. Setting up libhtml-tagset-perl (3.20-3) ... Setting up liblwp-mediatypes-perl (6.02-1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up libmagic1:armhf (1:5.35-4+deb10u1) ... Setting up libsepol1-dev:armhf (2.8-1) ... Setting up perl-openssl-defaults:armhf (3) ... Setting up gettext-base (0.19.8.1-9) ... Setting up libencode-locale-perl (1.05-1) ... Setting up libint1 (1.2.1-2) ... Setting up file (1:5.35-4+deb10u1) ... Setting up libffi-dev:armhf (3.2.1-9) ... Setting up libpthread-stubs0-dev:armhf (0.4-1) ... Setting up libicu63:armhf (63.1-6+deb10u1) ... Setting up libkrb5support0:armhf (1.17-3) ... Setting up xtrans-dev (1.3.5-1) ... Setting up autotools-dev (20180224.1) ... Setting up libglib2.0-data (2.58.3-2+deb10u2) ... Setting up libx11-data (2:1.6.7-1) ... Setting up uuid-dev:armhf (2.33.1-0.1) ... Setting up libncurses6:armhf (6.1+20181013-2+deb10u2) ... Setting up libsigsegv2:armhf (2.12-2) ... Setting up libpcre32-3:armhf (2:8.39-12) ... Setting up libio-html-perl (1.001-1) ... Setting up autopoint (0.19.8.1-9) ... Setting up libsc-data (2.3.1-19) ... Setting up pkg-config (0.29-6) ... Setting up libk5crypto3:armhf (1.17-3) ... Setting up libltdl7:armhf (2.4.6-9) ... Setting up libevent-core-2.1-6:armhf (2.1.8-stable-4) ... Setting up libgfortran5:armhf (8.3.0-6) ... Setting up libevent-2.1-6:armhf (2.1.8-stable-4) ... Setting up libtimedate-perl (2.3000-2+deb10u1) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-1) ... Setting up sensible-utils (0.0.12) ... Setting up ocl-icd-libopencl1:armhf (2.2.12-2) ... Setting up libuchardet0:armhf (0.0.6-3) ... Setting up libnl-3-200:armhf (3.4.0-1) ... Setting up openmpi-common (3.1.3-11) ... Setting up xorg-sgml-doctools (1:1.11-1) ... Setting up netbase (5.6) ... Setting up libkrb5-3:armhf (1.17-3) ... Setting up libmpdec2:armhf (2.4.2-2) ... Setting up openssl (1.1.1d-0+deb10u3) ... Setting up libbsd0:armhf (0.9.1-2) ... Setting up libdrm-common (2.4.97-1) ... Setting up libelf1:armhf (0.176-1.1) ... Setting up readline-common (7.0-5) ... Setting up libxml2:armhf (2.9.4+dfsg1-7+b3) ... Setting up liburi-perl (1.76-1) ... Setting up libreadline7:armhf (7.0-5) ... Setting up libnet-ssleay-perl (1.85-2+b1) ... Setting up x11proto-dev (2018.4-4) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libblkid-dev:armhf (2.33.1-0.1) ... Setting up libgfortran-8-dev:armhf (8.3.0-6) ... Setting up libevent-pthreads-2.1-6:armhf (2.1.8-stable-4) ... Setting up libhttp-date-perl (6.02-1) ... Setting up libxdmcp6:armhf (1:1.1.2-3) ... Setting up libpython3.7-stdlib:armhf (3.7.3-2+deb10u2) ... Setting up libxcb1:armhf (1.13.1-2) ... Setting up libfile-listing-perl (6.04-1) ... Setting up libxau-dev:armhf (1:1.0.8-1+b2) ... Setting up libtool (2.4.6-9) ... Setting up libpcre3-dev:armhf (2:8.39-12) ... Setting up libhwloc5:armhf (1.11.12-3) ... Setting up gfortran-8 (8.3.0-6) ... Setting up libedit2:armhf (3.1-20181209-1) ... Setting up libglib2.0-bin (2.58.3-2+deb10u2) ... Setting up libnet-http-perl (6.18-1) ... Setting up m4 (1.4.18-2) ... Setting up libhwloc-plugins:armhf (1.11.12-3) ... Setting up gfortran (4:8.3.0-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libmopac7-1gf (1.15-6+b3) ... Setting up libnl-route-3-200:armhf (3.4.0-1) ... Setting up ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 128 added, 0 removed; done. Setting up libxdmcp-dev:armhf (1:1.1.2-3) ... Setting up libblas3:armhf (3.8.0-2) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode Setting up x11proto-core-dev (2018.4-4) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:armhf (1.17-3) ... Setting up libcroco3:armhf (0.6.12-3) ... Setting up autoconf (2.69-11) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libdrm2:armhf (2.4.97-1) ... Setting up dwz (0.12-3) ... Setting up libnl-3-dev:armhf (3.4.0-1) ... Setting up groff-base (1.22.4-3) ... Setting up libhtml-parser-perl (3.72-3+b3) ... Setting up libx11-6:armhf (2:1.6.7-1) ... Setting up libdrm-omap1:armhf (2.4.97-1) ... Setting up libmount-dev:armhf (2.33.1-0.1) ... Setting up libdrm-exynos1:armhf (2.4.97-1) ... Setting up libio-socket-ssl-perl (2.060-3) ... Setting up libblas-dev:armhf (3.8.0-2) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode Setting up libpython3-stdlib:armhf (3.7.3-1) ... Setting up libhttp-message-perl (6.18-1) ... Setting up libdrm-amdgpu1:armhf (2.4.97-1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up python3.7 (3.7.3-2+deb10u2) ... Setting up libhttp-negotiate-perl (6.01-1) ... Setting up libibverbs1:armhf (22.1-1) ... Setting up flex (2.6.4-6.2) ... Setting up liblapack3:armhf (3.8.0-2) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up libdrm-nouveau2:armhf (2.4.97-1) ... Setting up gettext (0.19.8.1-9) ... Setting up libdrm-etnaviv1:armhf (2.4.97-1) ... Setting up libxcb1-dev:armhf (1.13.1-2) ... Setting up libpmix2:armhf (3.1.2-3) ... Setting up ibverbs-providers:armhf (22.1-1) ... Setting up libhttp-cookies-perl (6.04-1) ... Setting up libselinux1-dev:armhf (2.8-1+b1) ... Setting up libdrm-radeon1:armhf (2.4.97-1) ... Setting up openssh-client (1:7.9p1-10+deb10u2) ... Setting up libmopac7-dev (1.15-6+b3) ... Setting up libhtml-tree-perl (5.07-2) ... Setting up libopenmpi3:armhf (3.1.3-11) ... Setting up libx11-dev:armhf (2:1.6.7-1) ... Setting up python3 (3.7.3-1) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libnl-route-3-dev:armhf (3.4.0-1) ... Setting up libltdl-dev:armhf (2.4.6-9) ... Setting up libsc7v5 (2.3.1-19) ... Setting up liblapack-dev:armhf (3.8.0-2) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode Setting up libdrm-freedreno1:armhf (2.4.97-1) ... Setting up libdrm-tegra0:armhf (2.4.97-1) ... Setting up libhwloc-dev:armhf (1.11.12-3) ... Setting up python3-lib2to3 (3.7.3-1) ... Setting up openmpi-bin (3.1.3-11) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up python3-distutils (3.7.3-1) ... Setting up libglib2.0-dev-bin (2.58.3-2+deb10u2) ... Setting up libdrm-dev:armhf (2.4.97-1) ... Setting up po-debconf (1.0.21) ... Setting up libibverbs-dev:armhf (22.1-1) ... Setting up libglib2.0-dev:armhf (2.58.3-2+deb10u2) ... Setting up mesa-common-dev:armhf (18.3.6-2+deb10u1) ... Setting up libopenmpi-dev:armhf (3.1.3-11) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/openmpi/include to provide /usr/include/arm-linux-gnueabihf/mpi (mpi-arm-linux-gnueabihf) in auto mode Setting up mpi-default-dev (1.13) ... Setting up libsc-dev (2.3.1-19) ... Setting up libwww-perl (6.36-2) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Setting up liblwp-protocol-https-perl (6.07-2) ... Setting up libxml-parser-perl (2.44-4) ... Setting up debhelper (12.1.1) ... Setting up intltool (0.51.0-5) ... Processing triggers for libc-bin (2.28-10) ... Processing triggers for ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/libghemical-3.0.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package libghemical dpkg-buildpackage: info: source version 3.0.0-4.2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Alastair McKinstry dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf dpkg-source: warning: unknown information field 'Dm-Upload-Allowed' in input data in general section of control info file fakeroot debian/rules clean dh clean --parallel --with autoreconf dh: Compatibility levels before 9 are deprecated (level 7 in use) dh_auto_clean -O--parallel dh_auto_clean: Compatibility levels before 9 are deprecated (level 7 in use) dh_autoreconf_clean -O--parallel dh_clean -O--parallel dh_clean: Compatibility levels before 9 are deprecated (level 7 in use) debian/rules build dh build --parallel --with autoreconf dh: Compatibility levels before 9 are deprecated (level 7 in use) dh_update_autotools_config -O--parallel dh_autoreconf -O--parallel libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac, libtoolize: and rerunning libtoolize and aclocal. libtoolize: Consider adding '-I m4' to ACLOCAL_AMFLAGS in Makefile.am. configure.ac:86: installing './compile' configure.ac:42: installing './missing' /usr/share/automake-1.16/am/ltlibrary.am: warning: 'libghemical.la': linking libtool libraries using a non-POSIX /usr/share/automake-1.16/am/ltlibrary.am: archiver requires 'AM_PROG_AR' in 'configure.ac' src/Makefile.am:1: while processing Libtool library 'libghemical.la' src/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/libghemical-3.0.0' dh_auto_configure -- --enable-mpqc --enable-mopac7 --disable-sctest dh_auto_configure: Compatibility levels before 9 are deprecated (level 7 in use) ./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libexecdir=\${prefix}/lib/libghemical --disable-maintainer-mode --disable-dependency-tracking --enable-mpqc --enable-mopac7 --disable-sctest configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking build system type... arm-unknown-linux-gnueabihf checking host system type... arm-unknown-linux-gnueabihf checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... none checking how to run the C preprocessor... gcc -E checking how to run the C++ preprocessor... g++ -E checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for ar... /usr/bin/ar checking for sh... /bin/sh checking whether make sets $(MAKE)... (cached) yes checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking whether NLS is requested... yes checking for intltool >= 0.40.0... 0.51.0 found checking for intltool-update... /usr/bin/intltool-update checking for intltool-merge... /usr/bin/intltool-merge checking for intltool-extract... /usr/bin/intltool-extract checking for xgettext... /usr/bin/xgettext checking for msgmerge... /usr/bin/msgmerge checking for msgfmt... /usr/bin/msgfmt checking for gmsgfmt... /usr/bin/msgfmt checking for perl... /usr/bin/perl checking for perl >= 5.8.1... 5.28.1 checking for XML::Parser... ok checking locale.h usability... yes checking locale.h presence... yes checking for locale.h... yes checking for LC_MESSAGES... yes checking for CFPreferencesCopyAppValue... no checking for CFLocaleCopyCurrent... no checking libintl.h usability... yes checking libintl.h presence... yes checking for libintl.h... yes checking for ngettext in libc... yes checking for dgettext in libc... yes checking for bind_textdomain_codeset... yes checking for msgfmt... (cached) /usr/bin/msgfmt checking for dcgettext... yes checking if msgfmt accepts -c... yes checking for gmsgfmt... (cached) /usr/bin/msgfmt checking for xgettext... (cached) /usr/bin/xgettext checking whether build environment is sane... yes checking for acos in -lm... yes checking for main in -lblas... yes checking for main in -llapack... yes checking for sc-config... /usr/bin/sc-config checking SC - version... yes checking for MOPAC7... yes checking GL/gl.h usability... yes checking GL/gl.h presence... yes checking for GL/gl.h... yes checking for gcc option to accept ISO C99... none needed checking for gcc option to accept ISO Standard C... (cached) none needed checking for inline... inline checking for an ANSI C-conforming const... yes checking for ANSI C header files... (cached) yes configure: build options: ^^^^^^^^^^^^^^ enable MPQC : yes enable MOPAC7 : yes checking that generated files are newer than configure... done checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating libghemical.pc config.status: creating Makefile config.status: creating bin/Makefile config.status: creating bin/amber/Makefile config.status: creating bin/builder/Makefile config.status: creating bin/param_mm/Makefile config.status: creating bin/param_mm/default/Makefile config.status: creating bin/param_mm/prmfit/Makefile config.status: creating bin/param_mm/tripos52/Makefile config.status: creating bin/param_sf/Makefile config.status: creating bin/param_sf/default/Makefile config.status: creating po/Makefile.in config.status: creating src/Makefile config.status: creating src/libghemicalconfig.h config.status: creating src/libghemical-features.h config.status: executing src/libghemicalconfig2.h commands config.status: executing depfiles commands config.status: executing libtool commands config.status: executing default-1 commands config.status: executing stamp.h commands config.status: executing po/stamp-it commands configure: WARNING: unrecognized options: --disable-maintainer-mode make[1]: Leaving directory '/build/libghemical-3.0.0' dh_auto_build -O--parallel dh_auto_build: Compatibility levels before 9 are deprecated (level 7 in use) make -j4 make[1]: Entering directory '/build/libghemical-3.0.0' Making all in src make[2]: Entering directory '/build/libghemical-3.0.0/src' make all-am make[3]: Entering directory '/build/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o atom.lo atom.cpp /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o bond.lo bond.cpp /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o constraint.lo constraint.cpp /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o model.lo model.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c atom.cpp -fPIC -DPIC -o .libs/atom.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c bond.cpp -fPIC -DPIC -o .libs/bond.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c constraint.cpp -fPIC -DPIC -o .libs/constraint.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c model.cpp -fPIC -DPIC -o .libs/model.o atom.cpp:33:47: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] element element::current_element = element("C"); ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c constraint.cpp -o constraint.o >/dev/null 2>&1 In file included from model.cpp:31: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:148: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:135: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c atom.cpp -o atom.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c bond.cpp -o bond.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o engine.lo engine.cpp In file included from model.cpp:35: eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:90:148: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:91:135: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:127:148: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:128:135: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c engine.cpp -fPIC -DPIC -o .libs/engine.o /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o typerule.lo typerule.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c typerule.cpp -fPIC -DPIC -o .libs/typerule.o model.cpp: In member function 'bool model::GetCRDSetVisible(i32u)': model.cpp:319:23: warning: control reaches end of non-void function [-Wreturn-type] else assertion_failed(__FILE__, __LINE__, "index overflow"); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o utility.lo utility.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c utility.cpp -fPIC -DPIC -o .libs/utility.o typerule.cpp: In member function 'i32s typerule::ReadSubRule(std::istream*, std::ostream*)': typerule.cpp:172:28: warning: narrowing conversion of 'strlen(((const char*)((char*)(&((typerule*)this)->typerule::buffer))))' from 'size_t' {aka 'unsigned int'} to 'i32s' {aka 'int'} inside { } [-Wnarrowing] i32s tmp1[2] = { strlen(buffer), 0 }; ~~~~~~^~~~~~~~ utility.cpp: In function 'void DefineSecondaryStructure(model*)': utility.cpp:308:28: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} inside { } [-Wnarrowing] i32s tmp1[2] = { n1, n2 }; ^ utility.cpp:309:32: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} inside { } [-Wnarrowing] i32s tmp2[2] = { n1, n2 + 4 }; ^ utility.cpp:349:32: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} inside { } [-Wnarrowing] i32s t1a[2] = { n1, n2 - 1 }; i32s t1b[2] = { n1, n3 }; ^ utility.cpp:349:58: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} inside { } [-Wnarrowing] i32s t1a[2] = { n1, n2 - 1 }; i32s t1b[2] = { n1, n3 }; ^ utility.cpp:352:28: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} inside { } [-Wnarrowing] i32s t2a[2] = { n1, n3 }; i32s t2b[2] = { n1, n2 + 1 }; ^ utility.cpp:352:58: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} inside { } [-Wnarrowing] i32s t2a[2] = { n1, n3 }; i32s t2b[2] = { n1, n2 + 1 }; ^ utility.cpp:355:32: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} inside { } [-Wnarrowing] i32s t3a[2] = { n1, n3 - 1 }; i32s t3b[2] = { n1, n2 }; ^ utility.cpp:355:58: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} inside { } [-Wnarrowing] i32s t3a[2] = { n1, n3 - 1 }; i32s t3b[2] = { n1, n2 }; ^ utility.cpp:358:28: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} inside { } [-Wnarrowing] i32s t4a[2] = { n1, n2 }; i32s t4b[2] = { n1, n3 + 1 }; ^ utility.cpp:358:58: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} inside { } [-Wnarrowing] i32s t4a[2] = { n1, n2 }; i32s t4b[2] = { n1, n3 + 1 }; ^ utility.cpp:361:28: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} inside { } [-Wnarrowing] i32s t5a[2] = { n1, n2 }; i32s t5b[2] = { n1, n3 }; ^ utility.cpp:361:54: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} inside { } [-Wnarrowing] i32s t5a[2] = { n1, n2 }; i32s t5b[2] = { n1, n3 }; ^ utility.cpp:364:28: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} inside { } [-Wnarrowing] i32s t6a[2] = { n1, n3 }; i32s t6b[2] = { n1, n2 }; ^ utility.cpp:364:54: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} inside { } [-Wnarrowing] i32s t6a[2] = { n1, n3 }; i32s t6b[2] = { n1, n2 }; ^ utility.cpp:367:32: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} inside { } [-Wnarrowing] i32s t7a[2] = { n1, n2 - 1 }; i32s t7b[2] = { n1, n3 + 1 }; ^ utility.cpp:367:62: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} inside { } [-Wnarrowing] i32s t7a[2] = { n1, n2 - 1 }; i32s t7b[2] = { n1, n3 + 1 }; ^ utility.cpp:370:32: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} inside { } [-Wnarrowing] i32s t8a[2] = { n1, n3 - 1 }; i32s t8b[2] = { n1, n2 + 1 }; ^ utility.cpp:370:62: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} inside { } [-Wnarrowing] i32s t8a[2] = { n1, n3 - 1 }; i32s t8b[2] = { n1, n2 + 1 }; ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c utility.cpp -o utility.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c typerule.cpp -o typerule.o >/dev/null 2>&1 model.cpp: In member function 'virtual void model::RemoveAtom(iter_al)': model.cpp:636:6: note: parameter passing for argument of type 'iter_al' {aka 'std::_List_iterator'} changed in GCC 7.1 void model::RemoveAtom(iter_al it1) ^~~~~ model.cpp: In member function 'void model::ClearModel()': model.cpp:844:13: note: parameter passing for argument of type 'iter_al' {aka 'std::_List_iterator'} changed in GCC 7.1 RemoveAtom(it1); ~~~~~~~~~~^~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c engine.cpp -o engine.o >/dev/null 2>&1 model.cpp: In member function 'void model::RemoveHydrogens()': model.cpp:1960:14: note: parameter passing for argument of type 'iter_al' {aka 'std::_List_iterator'} changed in GCC 7.1 RemoveAtom(ita1); // now this iterator is invalidated?!?!?! ~~~~~~~~~~^~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o chn_info.lo chn_info.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c chn_info.cpp -fPIC -DPIC -o .libs/chn_info.o /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o seqbuild.lo seqbuild.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c seqbuild.cpp -fPIC -DPIC -o .libs/seqbuild.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c chn_info.cpp -o chn_info.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o mfinder.lo mfinder.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c mfinder.cpp -fPIC -DPIC -o .libs/mfinder.o /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o eng1_qm.lo eng1_qm.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng1_qm.cpp -fPIC -DPIC -o .libs/eng1_qm.o In file included from eng1_qm.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:148: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:135: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ In file included from /usr/include/c++/8/vector:69, from atom.h:42, from mfinder.h:35, from mfinder.cpp:22: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const mf_data_atm&}; _Tp = mf_data_atm; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from atom.h:42, from mfinder.h:35, from mfinder.cpp:22: /usr/include/c++/8/bits/stl_vector.h: In constructor 'mfinder::mfinder(char*)': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng1_qm.cpp -o eng1_qm.o >/dev/null 2>&1 In file included from /usr/include/c++/8/vector:69, from atom.h:42, from seqbuild.h:43, from seqbuild.cpp:22: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const sb_data_atm&}; _Tp = sb_data_atm; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c mfinder.cpp -o mfinder.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o eng1_qm_mpqc.lo eng1_qm_mpqc.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng1_qm_mpqc.cpp -fPIC -DPIC -o .libs/eng1_qm_mpqc.o In file included from eng1_qm_mpqc.h:32, from eng1_qm_mpqc.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:148: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:135: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c model.cpp -o model.o >/dev/null 2>&1 In file included from /usr/include/c++/8/vector:64, from atom.h:42, from seqbuild.h:43, from seqbuild.cpp:22: /usr/include/c++/8/bits/stl_vector.h: In function 'std::istream& operator>>(std::istream&, sb_data_res&)': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void sb_data_res::ReadModification(std::istream&)': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'sequencebuilder::sequencebuilder(chn_info::chn_type, const char*)': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o eng1_qm_mopac.lo eng1_qm_mopac.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng1_qm_mopac.cpp -fPIC -DPIC -o .libs/eng1_qm_mopac.o In file included from eng1_qm_mopac.h:30, from eng1_qm_mopac.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:148: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:135: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c seqbuild.cpp -o seqbuild.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng1_qm_mpqc.cpp -o eng1_qm_mpqc.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng1_qm_mopac.cpp -o eng1_qm_mopac.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o eng1_mm.lo eng1_mm.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng1_mm.cpp -fPIC -DPIC -o .libs/eng1_mm.o In file included from /usr/include/c++/8/vector:69, from atom.h:42, from eng1_mm.h:35, from eng1_mm.cpp:22: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const mm_c_dst&}; _Tp = mm_c_dst; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from atom.h:42, from eng1_mm.h:35, from eng1_mm.cpp:22: /usr/include/c++/8/bits/stl_vector.h: In constructor 'eng1_mm::eng1_mm(setup*, i32u)': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'eng1_mm::eng1_mm(setup*, i32u)': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o eng1_mm_tripos52.lo eng1_mm_tripos52.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng1_mm_tripos52.cpp -fPIC -DPIC -o .libs/eng1_mm_tripos52.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng1_mm.cpp -o eng1_mm.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o tab_mm_tripos52.lo tab_mm_tripos52.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c tab_mm_tripos52.cpp -fPIC -DPIC -o .libs/tab_mm_tripos52.o In file included from /usr/include/c++/8/vector:69, from atom.h:42, from eng1_mm.h:35, from eng1_mm_tripos52.h:39, from eng1_mm_tripos52.cpp:22: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const mm_tripos52_bt1&}; _Tp = mm_tripos52_bt1; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const mm_tripos52_bt2&}; _Tp = mm_tripos52_bt2; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const mm_tripos52_bt3&}; _Tp = mm_tripos52_bt3; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from atom.h:42, from eng1_mm.h:35, from eng1_mm_tripos52.h:39, from eng1_mm_tripos52.cpp:22: /usr/include/c++/8/bits/stl_vector.h: In constructor 'eng1_mm_tripos52_bt::eng1_mm_tripos52_bt(setup*, i32u)': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o eng1_mm_default.lo eng1_mm_default.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng1_mm_default.cpp -fPIC -DPIC -o .libs/eng1_mm_default.o /usr/include/c++/8/bits/stl_vector.h: In constructor 'eng1_mm_tripos52_bt::eng1_mm_tripos52_bt(setup*, i32u)': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from atom.h:42, from eng1_mm.h:35, from eng1_mm_tripos52.h:39, from tab_mm_tripos52.h:33, from tab_mm_tripos52.cpp:22: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const tripos52_bs&}; _Tp = tripos52_bs; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const tripos52_ab&}; _Tp = tripos52_ab; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const tripos52_tr&}; _Tp = tripos52_tr; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const tripos52_lj&}; _Tp = tripos52_lj; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const tripos52_ci&}; _Tp = tripos52_ci; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from atom.h:42, from eng1_mm.h:35, from eng1_mm_tripos52.h:39, from tab_mm_tripos52.h:33, from tab_mm_tripos52.cpp:22: /usr/include/c++/8/bits/stl_vector.h: In constructor 'tripos52_tables::tripos52_tables()': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng1_mm_tripos52.cpp -o eng1_mm_tripos52.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o tab_mm_default.lo tab_mm_default.cpp In file included from /usr/include/c++/8/vector:69, from atom.h:42, from eng1_mm.h:35, from eng1_mm_default.h:40, from eng1_mm_default.cpp:22: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const mm_default_bt1&}; _Tp = mm_default_bt1; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const mm_default_bt2&}; _Tp = mm_default_bt2; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c tab_mm_default.cpp -fPIC -DPIC -o .libs/tab_mm_default.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c tab_mm_tripos52.cpp -o tab_mm_tripos52.o >/dev/null 2>&1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const mm_default_bt3&}; _Tp = mm_default_bt3; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const mm_default_bt4&}; _Tp = mm_default_bt4; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from atom.h:42, from eng1_mm.h:35, from eng1_mm_default.h:40, from eng1_mm_default.cpp:22: /usr/include/c++/8/bits/stl_vector.h: In constructor 'eng1_mm_default_bt::eng1_mm_default_bt(setup*, i32u)': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'eng1_mm_default_bt::eng1_mm_default_bt(setup*, i32u)': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from atom.h:42, from eng1_mm.h:35, from eng1_mm_default.h:40, from tab_mm_default.h:48, from tab_mm_default.cpp:22: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const default_at&}; _Tp = default_at; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const default_bs&}; _Tp = default_bs; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o eng1_mm_prmfit.lo eng1_mm_prmfit.cpp /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const default_ab&}; _Tp = default_ab; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const default_tr&}; _Tp = default_tr; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng1_mm_prmfit.cpp -fPIC -DPIC -o .libs/eng1_mm_prmfit.o /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const default_op&}; _Tp = default_op; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from atom.h:42, from eng1_mm.h:35, from eng1_mm_default.h:40, from tab_mm_default.h:48, from tab_mm_default.cpp:22: /usr/include/c++/8/bits/stl_vector.h: In constructor 'default_tables::default_tables()': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng1_mm_default.cpp -o eng1_mm_default.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o tab_mm_prmfit.lo tab_mm_prmfit.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c tab_mm_prmfit.cpp -fPIC -DPIC -o .libs/tab_mm_prmfit.o In file included from /usr/include/c++/8/vector:69, from atom.h:42, from eng1_mm.h:35, from eng1_mm_prmfit.h:35, from eng1_mm_prmfit.cpp:22: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const mm_prmfit_bt1&}; _Tp = mm_prmfit_bt1; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const mm_prmfit_bt2&}; _Tp = mm_prmfit_bt2; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const mm_prmfit_bt3&}; _Tp = mm_prmfit_bt3; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const mm_prmfit_bt4&}; _Tp = mm_prmfit_bt4; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const mm_prmfit_nbt1&}; _Tp = mm_prmfit_nbt1; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from atom.h:42, from eng1_mm.h:35, from eng1_mm_prmfit.h:35, from eng1_mm_prmfit.cpp:22: /usr/include/c++/8/bits/stl_vector.h: In constructor 'eng1_mm_prmfit::eng1_mm_prmfit(setup*, i32u, prmfit_tables&)': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from atom.h:42, from eng1_mm.h:35, from eng1_mm_prmfit.h:35, from tab_mm_prmfit.h:42, from tab_mm_prmfit.cpp:22: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const prmfit_at&}; _Tp = prmfit_at; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const prmfit_bs&}; _Tp = prmfit_bs; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c tab_mm_default.cpp -o tab_mm_default.o >/dev/null 2>&1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const prmfit_ab&}; _Tp = prmfit_ab; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const prmfit_tr&}; _Tp = prmfit_tr; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const prmfit_op&}; _Tp = prmfit_op; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from atom.h:42, from eng1_mm.h:35, from eng1_mm_prmfit.h:35, from tab_mm_prmfit.h:42, from tab_mm_prmfit.cpp:22: /usr/include/c++/8/bits/stl_vector.h: In constructor 'prmfit_tables::prmfit_tables(const char*)': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor 'eng1_mm_prmfit::eng1_mm_prmfit(setup*, i32u, prmfit_tables&)': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c tab_mm_prmfit.cpp -o tab_mm_prmfit.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng1_mm_prmfit.cpp -o eng1_mm_prmfit.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o eng1_sf.lo eng1_sf.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng1_sf.cpp -fPIC -DPIC -o .libs/eng1_sf.o /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o eng1_sf_ua.lo eng1_sf_ua.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng1_sf_ua.cpp -fPIC -DPIC -o .libs/eng1_sf_ua.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng1_sf_ua.cpp -o eng1_sf_ua.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o eng1_sf_cg.lo eng1_sf_cg.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng1_sf_cg.cpp -fPIC -DPIC -o .libs/eng1_sf_cg.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng1_sf_cg.cpp -o eng1_sf_cg.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o eng2_qm_mm.lo eng2_qm_mm.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng2_qm_mm.cpp -fPIC -DPIC -o .libs/eng2_qm_mm.o In file included from eng2_qm_mm.h:28, from eng2_qm_mm.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:148: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:135: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ In file included from eng2_qm_mm.cpp:22: eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:90:148: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:91:135: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:127:148: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:128:135: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng2_qm_mm.cpp -o eng2_qm_mm.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o notice.lo notice.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c notice.cpp -fPIC -DPIC -o .libs/notice.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c notice.cpp -o notice.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o conjgrad.lo conjgrad.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c conjgrad.cpp -fPIC -DPIC -o .libs/conjgrad.o /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o intcrd.lo intcrd.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c intcrd.cpp -fPIC -DPIC -o .libs/intcrd.o In file included from /usr/include/c++/8/vector:69, from engine.h:47, from eng1_sf.h:78, from eng1_sf.cpp:22: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const sf_bt1&}; _Tp = sf_bt1; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const sf_bt2&}; _Tp = sf_bt2; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const sf_bt3&}; _Tp = sf_bt3; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const sf_bt4&}; _Tp = sf_bt4; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const sf_nonbonded_lookup&}; _Tp = sf_nonbonded_lookup; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const sf_nbt1&}; _Tp = sf_nbt1; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from conjgrad.h:32, from conjgrad.cpp:22: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const cgvar&}; _Tp = cgvar; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from conjgrad.h:32, from conjgrad.cpp:22: /usr/include/c++/8/bits/stl_vector.h: In member function 'void conjugate_gradient::AddVar(f64*, f64*)': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c conjgrad.cpp -o conjgrad.o >/dev/null 2>&1 In file included from /usr/include/c++/8/vector:64, from engine.h:47, from eng1_sf.h:78, from eng1_sf.cpp:22: /usr/include/c++/8/bits/stl_vector.h: In constructor 'eng1_sf::eng1_sf(setup*, i32u, bool, bool)': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o search.lo search.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c search.cpp -fPIC -DPIC -o .libs/search.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c intcrd.cpp -o intcrd.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o geomopt.lo geomopt.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c geomopt.cpp -fPIC -DPIC -o .libs/geomopt.o In file included from search.h:35, from search.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:148: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:135: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ In file included from geomopt.h:31, from geomopt.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:148: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:135: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ /usr/include/c++/8/bits/stl_vector.h: In constructor 'eng1_sf::eng1_sf(setup*, i32u, bool, bool)': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c geomopt.cpp -o geomopt.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o moldyn.lo moldyn.cpp search.cpp: In constructor 'transition_state_search::transition_state_search(model*, f64, f64)': search.cpp:714:18: note: parameter passing for argument of type 'iter_al' {aka 'std::_List_iterator'} changed in GCC 7.1 mdl->RemoveAtom(it1); ~~~~~~~~~~~~~~~^~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c moldyn.cpp -fPIC -DPIC -o .libs/moldyn.o /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o pop_ana.lo pop_ana.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c pop_ana.cpp -fPIC -DPIC -o .libs/pop_ana.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c search.cpp -o search.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c moldyn.cpp -o moldyn.o >/dev/null 2>&1 In file included from pop_ana.h:31, from pop_ana.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:148: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:135: warning: no return statement in function returning non-void [-Wreturn-type] virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c pop_ana.cpp -o pop_ana.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o sasaeval.lo sasaeval.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c sasaeval.cpp -fPIC -DPIC -o .libs/sasaeval.o /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c -o resonance.lo resonance.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c resonance.cpp -fPIC -DPIC -o .libs/resonance.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c resonance.cpp -o resonance.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c sasaeval.cpp -o sasaeval.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/sc -I/usr/include/mpi -pthread -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -g -O2 -c eng1_sf.cpp -o eng1_sf.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -version-info 5:1:0 -o libghemical.la -rpath /usr/lib atom.lo bond.lo constraint.lo model.lo engine.lo typerule.lo utility.lo chn_info.lo seqbuild.lo mfinder.lo eng1_qm.lo eng1_qm_mpqc.lo eng1_qm_mopac.lo eng1_mm.lo eng1_mm_tripos52.lo tab_mm_tripos52.lo eng1_mm_default.lo tab_mm_default.lo eng1_mm_prmfit.lo tab_mm_prmfit.lo eng1_sf.lo eng1_sf_ua.lo eng1_sf_cg.lo eng2_qm_mm.lo notice.lo conjgrad.lo intcrd.lo search.lo geomopt.lo moldyn.lo pop_ana.lo sasaeval.lo resonance.lo -llapack -lblas -lm -L/usr/lib -lSCmbptr12 -lSCcints -lSCmbpt -lSCpsi -lSCdft -lSCscf -lSCwfn -lSCintv3 -lSCbasis -lSCoint3 -lSCsolvent -lSCmolecule -lSCisosurf -lSCoptimize -lSCsymmetry -lSCscmat -lSCgroup -lSCoptions -lSCrender -lSCmisc -lSCstate -lSCkeyval -lSCclass -lSCcontainer -lSCref -lmopac7 -L/usr/lib/arm-linux-gnueabihf/openmpi/lib -lmpi_cxx -lmpi libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/8/crtbeginS.o .libs/atom.o .libs/bond.o .libs/constraint.o .libs/model.o .libs/engine.o .libs/typerule.o .libs/utility.o .libs/chn_info.o .libs/seqbuild.o .libs/mfinder.o .libs/eng1_qm.o .libs/eng1_qm_mpqc.o .libs/eng1_qm_mopac.o .libs/eng1_mm.o .libs/eng1_mm_tripos52.o .libs/tab_mm_tripos52.o .libs/eng1_mm_default.o .libs/tab_mm_default.o .libs/eng1_mm_prmfit.o .libs/tab_mm_prmfit.o .libs/eng1_sf.o .libs/eng1_sf_ua.o .libs/eng1_sf_cg.o .libs/eng2_qm_mm.o .libs/notice.o .libs/conjgrad.o .libs/intcrd.o .libs/search.o .libs/geomopt.o .libs/moldyn.o .libs/pop_ana.o .libs/sasaeval.o .libs/resonance.o -llapack -lblas -L/usr/lib -lSCmbptr12 -lSCcints -lSCmbpt -lSCpsi -lSCdft -lSCscf -lSCwfn -lSCintv3 -lSCbasis -lSCoint3 -lSCsolvent -lSCmolecule -lSCisosurf -lSCoptimize -lSCsymmetry -lSCscmat -lSCgroup -lSCoptions -lSCrender -lSCmisc -lSCstate -lSCkeyval -lSCclass -lSCcontainer -lSCref -lmopac7 -L/usr/lib/arm-linux-gnueabihf/openmpi/lib -lmpi_cxx -lmpi -L/usr/lib/gcc/arm-linux-gnueabihf/8 -L/usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/8/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/8/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf/crtn.o -g -O2 -Wl,-soname -Wl,libghemical.so.5 -o .libs/libghemical.so.5.0.1 libtool: link: (cd ".libs" && rm -f "libghemical.so.5" && ln -s "libghemical.so.5.0.1" "libghemical.so.5") libtool: link: (cd ".libs" && rm -f "libghemical.so" && ln -s "libghemical.so.5.0.1" "libghemical.so") libtool: link: /usr/bin/ar cru .libs/libghemical.a atom.o bond.o constraint.o model.o engine.o typerule.o utility.o chn_info.o seqbuild.o mfinder.o eng1_qm.o eng1_qm_mpqc.o eng1_qm_mopac.o eng1_mm.o eng1_mm_tripos52.o tab_mm_tripos52.o eng1_mm_default.o tab_mm_default.o eng1_mm_prmfit.o tab_mm_prmfit.o eng1_sf.o eng1_sf_ua.o eng1_sf_cg.o eng2_qm_mm.o notice.o conjgrad.o intcrd.o search.o geomopt.o moldyn.o pop_ana.o sasaeval.o resonance.o /usr/bin/ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libghemical.a libtool: link: ( cd ".libs" && rm -f "libghemical.la" && ln -s "../libghemical.la" "libghemical.la" ) make[3]: Leaving directory '/build/libghemical-3.0.0/src' make[2]: Leaving directory '/build/libghemical-3.0.0/src' Making all in bin make[2]: Entering directory '/build/libghemical-3.0.0/bin' Making all in amber make[3]: Entering directory '/build/libghemical-3.0.0/bin/amber' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/libghemical-3.0.0/bin/amber' Making all in builder make[3]: Entering directory '/build/libghemical-3.0.0/bin/builder' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/libghemical-3.0.0/bin/builder' Making all in param_mm make[3]: Entering directory '/build/libghemical-3.0.0/bin/param_mm' Making all in default make[4]: Entering directory '/build/libghemical-3.0.0/bin/param_mm/default' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/libghemical-3.0.0/bin/param_mm/default' Making all in prmfit make[4]: Entering directory '/build/libghemical-3.0.0/bin/param_mm/prmfit' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/libghemical-3.0.0/bin/param_mm/prmfit' Making all in tripos52 make[4]: Entering directory '/build/libghemical-3.0.0/bin/param_mm/tripos52' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/libghemical-3.0.0/bin/param_mm/tripos52' make[4]: Entering directory '/build/libghemical-3.0.0/bin/param_mm' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/build/libghemical-3.0.0/bin/param_mm' make[3]: Leaving directory '/build/libghemical-3.0.0/bin/param_mm' Making all in param_sf make[3]: Entering directory '/build/libghemical-3.0.0/bin/param_sf' Making all in default make[4]: Entering directory '/build/libghemical-3.0.0/bin/param_sf/default' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/libghemical-3.0.0/bin/param_sf/default' make[4]: Entering directory '/build/libghemical-3.0.0/bin/param_sf' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/build/libghemical-3.0.0/bin/param_sf' make[3]: Leaving directory '/build/libghemical-3.0.0/bin/param_sf' make[3]: Entering directory '/build/libghemical-3.0.0/bin' make[3]: Nothing to be done for 'all-am'. make[3]: Leaving directory '/build/libghemical-3.0.0/bin' make[2]: Leaving directory '/build/libghemical-3.0.0/bin' Making all in po make[2]: Entering directory '/build/libghemical-3.0.0/po' file=`echo de | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file de.po file=`echo fi | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file fi.po file=`echo mk | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file mk.po file=`echo pt_BR | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file pt_BR.po file=`echo ru | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file ru.po file=`echo sq | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file sq.po make[2]: Leaving directory '/build/libghemical-3.0.0/po' make[2]: Entering directory '/build/libghemical-3.0.0' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/build/libghemical-3.0.0' make[1]: Leaving directory '/build/libghemical-3.0.0' dh_auto_test -O--parallel dh_auto_test: Compatibility levels before 9 are deprecated (level 7 in use) make -j4 check VERBOSE=1 make[1]: Entering directory '/build/libghemical-3.0.0' Making check in src make[2]: Entering directory '/build/libghemical-3.0.0/src' make[2]: Leaving directory '/build/libghemical-3.0.0/src' Making check in bin make[2]: Entering directory '/build/libghemical-3.0.0/bin' Making check in amber make[3]: Entering directory '/build/libghemical-3.0.0/bin/amber' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/build/libghemical-3.0.0/bin/amber' Making check in builder make[3]: Entering directory '/build/libghemical-3.0.0/bin/builder' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/build/libghemical-3.0.0/bin/builder' Making check in param_mm make[3]: Entering directory '/build/libghemical-3.0.0/bin/param_mm' Making check in default make[4]: Entering directory '/build/libghemical-3.0.0/bin/param_mm/default' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/libghemical-3.0.0/bin/param_mm/default' Making check in prmfit make[4]: Entering directory '/build/libghemical-3.0.0/bin/param_mm/prmfit' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/libghemical-3.0.0/bin/param_mm/prmfit' Making check in tripos52 make[4]: Entering directory '/build/libghemical-3.0.0/bin/param_mm/tripos52' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/libghemical-3.0.0/bin/param_mm/tripos52' make[4]: Entering directory '/build/libghemical-3.0.0/bin/param_mm' make[4]: Nothing to be done for 'check-am'. make[4]: Leaving directory '/build/libghemical-3.0.0/bin/param_mm' make[3]: Leaving directory '/build/libghemical-3.0.0/bin/param_mm' Making check in param_sf make[3]: Entering directory '/build/libghemical-3.0.0/bin/param_sf' Making check in default make[4]: Entering directory '/build/libghemical-3.0.0/bin/param_sf/default' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/libghemical-3.0.0/bin/param_sf/default' make[4]: Entering directory '/build/libghemical-3.0.0/bin/param_sf' make[4]: Nothing to be done for 'check-am'. make[4]: Leaving directory '/build/libghemical-3.0.0/bin/param_sf' make[3]: Leaving directory '/build/libghemical-3.0.0/bin/param_sf' make[3]: Entering directory '/build/libghemical-3.0.0/bin' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/build/libghemical-3.0.0/bin' make[2]: Leaving directory '/build/libghemical-3.0.0/bin' Making check in po make[2]: Entering directory '/build/libghemical-3.0.0/po' INTLTOOL_EXTRACT=/usr/bin/intltool-extract srcdir=. /usr/bin/intltool-update --gettext-package libghemical --pot rm -f missing notexist srcdir=. /usr/bin/intltool-update -m if [ -r missing -o -r notexist ]; then \ exit 1; \ fi make[2]: Leaving directory '/build/libghemical-3.0.0/po' make[2]: Entering directory '/build/libghemical-3.0.0' make[2]: Nothing to be done for 'check-am'. make[2]: Leaving directory '/build/libghemical-3.0.0' make[1]: Leaving directory '/build/libghemical-3.0.0' fakeroot debian/rules binary dh binary --parallel --with autoreconf dh: Compatibility levels before 9 are deprecated (level 7 in use) dh_testroot -O--parallel dh_prep -O--parallel dh_auto_install -O--parallel dh_auto_install: Compatibility levels before 9 are deprecated (level 7 in use) make -j1 install DESTDIR=/build/libghemical-3.0.0/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/libghemical-3.0.0' Making install in src make[2]: Entering directory '/build/libghemical-3.0.0/src' make[3]: Entering directory '/build/libghemical-3.0.0/src' /bin/mkdir -p '/build/libghemical-3.0.0/debian/tmp/usr/lib' /bin/sh ../libtool --mode=install /usr/bin/install -c libghemical.la '/build/libghemical-3.0.0/debian/tmp/usr/lib' libtool: install: /usr/bin/install -c .libs/libghemical.so.5.0.1 /build/libghemical-3.0.0/debian/tmp/usr/lib/libghemical.so.5.0.1 libtool: install: (cd /build/libghemical-3.0.0/debian/tmp/usr/lib && { ln -s -f libghemical.so.5.0.1 libghemical.so.5 || { rm -f libghemical.so.5 && ln -s libghemical.so.5.0.1 libghemical.so.5; }; }) libtool: install: (cd /build/libghemical-3.0.0/debian/tmp/usr/lib && { ln -s -f libghemical.so.5.0.1 libghemical.so || { rm -f libghemical.so && ln -s libghemical.so.5.0.1 libghemical.so; }; }) libtool: install: /usr/bin/install -c .libs/libghemical.lai /build/libghemical-3.0.0/debian/tmp/usr/lib/libghemical.la libtool: install: /usr/bin/install -c .libs/libghemical.a /build/libghemical-3.0.0/debian/tmp/usr/lib/libghemical.a libtool: install: chmod 644 /build/libghemical-3.0.0/debian/tmp/usr/lib/libghemical.a libtool: install: ranlib /build/libghemical-3.0.0/debian/tmp/usr/lib/libghemical.a libtool: warning: remember to run 'libtool --finish /usr/lib' /bin/mkdir -p '/build/libghemical-3.0.0/debian/tmp/usr/include/ghemical' /usr/bin/install -c -m 644 libghemicaldefine.h libghemical-features.h local_i18n.h typedef.h v3d.h atom.h bond.h constraint.h model.h engine.h typerule.h utility.h chn_info.h seqbuild.h mfinder.h eng1_qm.h eng1_qm_mpqc.h eng1_qm_mopac.h eng1_mm.h eng1_mm_tripos52.h tab_mm_tripos52.h eng1_mm_default.h tab_mm_default.h eng1_mm_prmfit.h tab_mm_prmfit.h eng1_sf.h eng1_sf_ua.h eng1_sf_cg.h eng2_qm_mm.h notice.h conjgrad.h intcrd.h search.h geomopt.h moldyn.h pop_ana.h sasaeval.h resonance.h '/build/libghemical-3.0.0/debian/tmp/usr/include/ghemical' make[3]: Leaving directory '/build/libghemical-3.0.0/src' make[2]: Leaving directory '/build/libghemical-3.0.0/src' Making install in bin make[2]: Entering directory '/build/libghemical-3.0.0/bin' Making install in amber make[3]: Entering directory '/build/libghemical-3.0.0/bin/amber' make[4]: Entering directory '/build/libghemical-3.0.0/bin/amber' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/amber' /usr/bin/install -c -m 644 all_amino94_MOD.in all_aminoct94.in all_aminont94.in all_nuc94_MOD.in parm99_frcmod_ff99SB.dat '/build/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/amber' make[4]: Leaving directory '/build/libghemical-3.0.0/bin/amber' make[3]: Leaving directory '/build/libghemical-3.0.0/bin/amber' Making install in builder make[3]: Entering directory '/build/libghemical-3.0.0/bin/builder' make[4]: Entering directory '/build/libghemical-3.0.0/bin/builder' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/builder' /usr/bin/install -c -m 644 amino.txt nucleic.txt '/build/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/builder' make[4]: Leaving directory '/build/libghemical-3.0.0/bin/builder' make[3]: Leaving directory '/build/libghemical-3.0.0/bin/builder' Making install in param_mm make[3]: Entering directory '/build/libghemical-3.0.0/bin/param_mm' Making install in default make[4]: Entering directory '/build/libghemical-3.0.0/bin/param_mm/default' make[5]: Entering directory '/build/libghemical-3.0.0/bin/param_mm/default' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/param_mm/default' /usr/bin/install -c -m 644 atomtypes.txt parameters1.txt parameters2.txt parameters3.txt parameters4.txt '/build/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/param_mm/default' make[5]: Leaving directory '/build/libghemical-3.0.0/bin/param_mm/default' make[4]: Leaving directory '/build/libghemical-3.0.0/bin/param_mm/default' Making install in prmfit make[4]: Entering directory '/build/libghemical-3.0.0/bin/param_mm/prmfit' make[5]: Entering directory '/build/libghemical-3.0.0/bin/param_mm/prmfit' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/param_mm/prmfit' /usr/bin/install -c -m 644 atomtypes.txt parameters1.txt parameters2.txt parameters3.txt parameters4.txt '/build/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/param_mm/prmfit' make[5]: Leaving directory '/build/libghemical-3.0.0/bin/param_mm/prmfit' make[4]: Leaving directory '/build/libghemical-3.0.0/bin/param_mm/prmfit' Making install in tripos52 make[4]: Entering directory '/build/libghemical-3.0.0/bin/param_mm/tripos52' make[5]: Entering directory '/build/libghemical-3.0.0/bin/param_mm/tripos52' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/param_mm/tripos52' /usr/bin/install -c -m 644 atomtypes.txt parameters1.txt parameters2.txt parameters3.txt parameters4.txt parameters5.txt '/build/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/param_mm/tripos52' make[5]: Leaving directory '/build/libghemical-3.0.0/bin/param_mm/tripos52' make[4]: Leaving directory '/build/libghemical-3.0.0/bin/param_mm/tripos52' make[4]: Entering directory '/build/libghemical-3.0.0/bin/param_mm' make[5]: Entering directory '/build/libghemical-3.0.0/bin/param_mm' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/libghemical-3.0.0/bin/param_mm' make[4]: Leaving directory '/build/libghemical-3.0.0/bin/param_mm' make[3]: Leaving directory '/build/libghemical-3.0.0/bin/param_mm' Making install in param_sf make[3]: Entering directory '/build/libghemical-3.0.0/bin/param_sf' Making install in default make[4]: Entering directory '/build/libghemical-3.0.0/bin/param_sf/default' make[5]: Entering directory '/build/libghemical-3.0.0/bin/param_sf/default' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/param_sf/default' /usr/bin/install -c -m 644 loopdip.txt looptor.txt nonbonded.txt '/build/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/param_sf/default' make[5]: Leaving directory '/build/libghemical-3.0.0/bin/param_sf/default' make[4]: Leaving directory '/build/libghemical-3.0.0/bin/param_sf/default' make[4]: Entering directory '/build/libghemical-3.0.0/bin/param_sf' make[5]: Entering directory '/build/libghemical-3.0.0/bin/param_sf' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/libghemical-3.0.0/bin/param_sf' make[4]: Leaving directory '/build/libghemical-3.0.0/bin/param_sf' make[3]: Leaving directory '/build/libghemical-3.0.0/bin/param_sf' make[3]: Entering directory '/build/libghemical-3.0.0/bin' make[4]: Entering directory '/build/libghemical-3.0.0/bin' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/libghemical-3.0.0/bin' make[3]: Leaving directory '/build/libghemical-3.0.0/bin' make[2]: Leaving directory '/build/libghemical-3.0.0/bin' Making install in po make[2]: Entering directory '/build/libghemical-3.0.0/po' linguas="de fi mk pt_BR ru sq "; \ for lang in $linguas; do \ dir=/build/libghemical-3.0.0/debian/tmp/usr/share/locale/$lang/LC_MESSAGES; \ /bin/sh /build/libghemical-3.0.0/install-sh -d $dir; \ if test -r $lang.gmo; then \ /usr/bin/install -c -m 644 $lang.gmo $dir/libghemical.mo; \ echo "installing $lang.gmo as $dir/libghemical.mo"; \ else \ /usr/bin/install -c -m 644 ./$lang.gmo $dir/libghemical.mo; \ echo "installing ./$lang.gmo as" \ "$dir/libghemical.mo"; \ fi; \ if test -r $lang.gmo.m; then \ /usr/bin/install -c -m 644 $lang.gmo.m $dir/libghemical.mo.m; \ echo "installing $lang.gmo.m as $dir/libghemical.mo.m"; \ else \ if test -r ./$lang.gmo.m ; then \ /usr/bin/install -c -m 644 ./$lang.gmo.m \ $dir/libghemical.mo.m; \ echo "installing ./$lang.gmo.m as" \ "$dir/libghemical.mo.m"; \ else \ true; \ fi; \ fi; \ done installing de.gmo as /build/libghemical-3.0.0/debian/tmp/usr/share/locale/de/LC_MESSAGES/libghemical.mo installing fi.gmo as /build/libghemical-3.0.0/debian/tmp/usr/share/locale/fi/LC_MESSAGES/libghemical.mo installing mk.gmo as /build/libghemical-3.0.0/debian/tmp/usr/share/locale/mk/LC_MESSAGES/libghemical.mo installing pt_BR.gmo as /build/libghemical-3.0.0/debian/tmp/usr/share/locale/pt_BR/LC_MESSAGES/libghemical.mo installing ru.gmo as /build/libghemical-3.0.0/debian/tmp/usr/share/locale/ru/LC_MESSAGES/libghemical.mo installing sq.gmo as /build/libghemical-3.0.0/debian/tmp/usr/share/locale/sq/LC_MESSAGES/libghemical.mo make[2]: Leaving directory '/build/libghemical-3.0.0/po' make[2]: Entering directory '/build/libghemical-3.0.0' make[3]: Entering directory '/build/libghemical-3.0.0' make[3]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/libghemical-3.0.0/debian/tmp/usr/lib/pkgconfig' /usr/bin/install -c -m 644 libghemical.pc '/build/libghemical-3.0.0/debian/tmp/usr/lib/pkgconfig' make[3]: Leaving directory '/build/libghemical-3.0.0' make[2]: Leaving directory '/build/libghemical-3.0.0' make[1]: Leaving directory '/build/libghemical-3.0.0' debian/rules override_dh_install make[1]: Entering directory '/build/libghemical-3.0.0' dh_install --list-missing dh_install: Compatibility levels before 9 are deprecated (level 7 in use) dh_install: Please use dh_missing --list-missing/--fail-missing instead dh_install: This feature will be removed in compat 12. dh_missing: Compatibility levels before 9 are deprecated (level 7 in use) dh_missing: usr/lib/libghemical.la exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: libghemical-data (2), libghemical-dev (4), libghemical5v5 (2) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built For a short-term work-around: Add the files to debian/not-installed make[1]: Leaving directory '/build/libghemical-3.0.0' dh_installdocs -O--parallel dh_installdocs: Compatibility levels before 9 are deprecated (level 7 in use) dh_installchangelogs -O--parallel dh_installchangelogs: Compatibility levels before 9 are deprecated (level 7 in use) dh_installinit -O--parallel dh_installinit: Compatibility levels before 9 are deprecated (level 7 in use) dh_perl -O--parallel dh_link -O--parallel dh_strip_nondeterminism -O--parallel Normalized debian/libghemical-data/usr/share/locale/fi/LC_MESSAGES/libghemical.mo Normalized debian/libghemical-data/usr/share/locale/ru/LC_MESSAGES/libghemical.mo Normalized debian/libghemical-data/usr/share/locale/pt_BR/LC_MESSAGES/libghemical.mo Normalized debian/libghemical-data/usr/share/locale/sq/LC_MESSAGES/libghemical.mo Normalized debian/libghemical-data/usr/share/locale/de/LC_MESSAGES/libghemical.mo Normalized debian/libghemical-data/usr/share/locale/mk/LC_MESSAGES/libghemical.mo dh_compress -O--parallel dh_compress: Compatibility levels before 9 are deprecated (level 7 in use) dh_compress: Compatibility levels before 9 are deprecated (level 7 in use) dh_compress: Compatibility levels before 9 are deprecated (level 7 in use) dh_fixperms -O--parallel dh_missing -O--parallel dh_missing: Compatibility levels before 9 are deprecated (level 7 in use) dh_strip -O--parallel dh_strip: Compatibility levels before 9 are deprecated (level 7 in use) dh_strip: Compatibility levels before 9 are deprecated (level 7 in use) dh_strip: Compatibility levels before 9 are deprecated (level 7 in use) dh_makeshlibs -O--parallel dh_makeshlibs: Compatibility levels before 9 are deprecated (level 7 in use) dh_shlibdeps -O--parallel dh_shlibdeps: Compatibility levels before 9 are deprecated (level 7 in use) dh_shlibdeps: Compatibility levels before 9 are deprecated (level 7 in use) dh_shlibdeps: Compatibility levels before 9 are deprecated (level 7 in use) dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libghemical5v5/usr/lib/libghemical.so.5.0.1 found in none of the libraries dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libghemical5v5/usr/lib/libghemical.so.5.0.1 was not linked against libSCoint3.so.7 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libghemical5v5/usr/lib/libghemical.so.5.0.1 was not linked against libSCintv3.so.7 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libghemical5v5/usr/lib/libghemical.so.5.0.1 was not linked against libSCsolvent.so.7 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libghemical5v5/usr/lib/libghemical.so.5.0.1 was not linked against libSCcontainer.so.7 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libghemical5v5/usr/lib/libghemical.so.5.0.1 was not linked against libSCstate.so.7 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libghemical5v5/usr/lib/libghemical.so.5.0.1 was not linked against libSCmbpt.so.7 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libghemical5v5/usr/lib/libghemical.so.5.0.1 was not linked against libSCmbptr12.so.7 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libghemical5v5/usr/lib/libghemical.so.5.0.1 was not linked against libSCpsi.so.7 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libghemical5v5/usr/lib/libghemical.so.5.0.1 was not linked against libSCcints.so.7 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libghemical5v5/usr/lib/libghemical.so.5.0.1 was not linked against libSCoptions.so.7 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libghemical5v5/usr/lib/libghemical.so.5.0.1 was not linked against libmpi_cxx.so.40 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libghemical5v5/usr/lib/libghemical.so.5.0.1 was not linked against libSCdft.so.7 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libghemical5v5/usr/lib/libghemical.so.5.0.1 was not linked against libmpi.so.40 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libghemical5v5/usr/lib/libghemical.so.5.0.1 was not linked against libblas.so.3 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libghemical5v5/usr/lib/libghemical.so.5.0.1 was not linked against liblapack.so.3 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libghemical5v5/usr/lib/libghemical.so.5.0.1 was not linked against libSCsymmetry.so.7 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libghemical5v5/usr/lib/libghemical.so.5.0.1 was not linked against libSCisosurf.so.7 (it uses none of the library's symbols) dh_installdeb -O--parallel dh_installdeb: Compatibility levels before 9 are deprecated (level 7 in use) dh_gencontrol -O--parallel dpkg-gencontrol: warning: unknown information field 'Dm-Upload-Allowed' in input data in general section of control info file dpkg-gencontrol: warning: unknown information field 'Dm-Upload-Allowed' in input data in general section of control info file dpkg-gencontrol: warning: unknown information field 'Dm-Upload-Allowed' in input data in general section of control info file dpkg-gencontrol: warning: unknown information field 'Dm-Upload-Allowed' in input data in general section of control info file dh_md5sums -O--parallel dh_builddeb -O--parallel dpkg-deb: building package 'libghemical5v5' in '../libghemical5v5_3.0.0-4.2_armhf.deb'. dpkg-deb: building package 'libghemical-dev' in '../libghemical-dev_3.0.0-4.2_armhf.deb'. dpkg-deb: building package 'libghemical5v5-dbgsym' in '../libghemical5v5-dbgsym_3.0.0-4.2_armhf.deb'. dpkg-deb: building package 'libghemical-data' in '../libghemical-data_3.0.0-4.2_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../libghemical_3.0.0-4.2_armhf.changes dpkg-genchanges: warning: unknown information field 'Dm-Upload-Allowed' in input data in general section of control info file dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: warning: unknown information field 'Dm-Upload-Allowed' in input data in general section of control info file dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: user script /srv/workspace/pbuilder/15080/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/15080/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/15080 and its subdirectories I: Current time: Sat Sep 19 13:34:31 +14 2020 I: pbuilder-time-stamp: 1600472071