I: pbuilder: network access will be disabled during build I: Current time: Wed Aug 12 02:58:55 -12 2020 I: pbuilder-time-stamp: 1597244335 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [libpdl-netcdf-perl_4.20-6.dsc] I: copying [./libpdl-netcdf-perl_4.20.orig.tar.gz] I: copying [./libpdl-netcdf-perl_4.20-6.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Sun Jul 22 05:58:54 2018 -12 gpgv: using RSA key 8182DE417056408D614650D16750F10AE88D4AF1 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libpdl-netcdf-perl_4.20-6.dsc dpkg-source: info: extracting libpdl-netcdf-perl in libpdl-netcdf-perl-4.20 dpkg-source: info: unpacking libpdl-netcdf-perl_4.20.orig.tar.gz dpkg-source: info: unpacking libpdl-netcdf-perl_4.20-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying perl-5.14-ccflags.patch dpkg-source: info: applying spelling-errors.patch dpkg-source: info: applying 32bits-integer-size.patch dpkg-source: info: applying skip-tests-for-big-endian.patch dpkg-source: info: applying reproducible-build.patch dpkg-source: info: applying spelling-errors2.patch I: using fakeroot in build. I: Installing the build-deps -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 9), dpkg-dev (>= 1.16.1~), libnetcdf-dev (>= 1:4.3.3.1), pdl (>= 1:2.016), perl dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19231 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 9); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on libnetcdf-dev (>= 1:4.3.3.1); however: Package libnetcdf-dev is not installed. pbuilder-satisfydepends-dummy depends on pdl (>= 1:2.016); however: Package pdl is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} gettext{a} gettext-base{a} groff-base{a} hdf5-helpers{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libbsd0{a} libcroco3{a} libcurl3-gnutls{a} libcurl4-gnutls-dev{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libgd3{a} libgfortran5{a} libglib2.0-0{a} libgsl23{a} libgslcblas0{a} libgssapi-krb5-2{a} libhdf4-0-alt{a} libhdf5-103{a} libhdf5-cpp-103{a} libhdf5-dev{a} libicu63{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.4-2{a} libldap-common{a} libmagic-mgc{a} libmagic1{a} libncurses6{a} libnetcdf-dev{a} libnetcdf13{a} libnghttp2-14{a} libpipeline1{a} libpng16-16{a} libproj13{a} libpsl5{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libssh2-1{a} libssl1.1{a} libsz2{a} libterm-readkey-perl{a} libtiff5{a} libtool{a} libuchardet0{a} libwebp6{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxml2{a} libxpm4{a} m4{a} man-db{a} pdl{a} po-debconf{a} proj-data{a} sensible-utils{a} ucf{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libglib2.0-data libgpm2 libltdl-dev libmail-sendmail-perl libsasl2-modules libterm-readline-gnu-perl libterm-readline-perl-perl lynx pkg-config pkgconf publicsuffix shared-mime-info wget xdg-user-dirs 0 packages upgraded, 87 newly installed, 0 to remove and 0 not upgraded. Need to get 46.2 MB of archives. After unpacking 157 MB will be used. Writing extended state information... Get: 1 http://cdn-fastly.deb.debian.org/debian buster/main i386 libbsd0 i386 0.9.1-2 [104 kB] Get: 2 http://cdn-fastly.deb.debian.org/debian buster/main i386 bsdmainutils i386 11.1.2+b1 [193 kB] Get: 3 http://cdn-fastly.deb.debian.org/debian buster/main i386 libuchardet0 i386 0.0.6-3 [65.2 kB] Get: 4 http://cdn-fastly.deb.debian.org/debian buster/main i386 groff-base i386 1.22.4-3 [935 kB] Get: 5 http://cdn-fastly.deb.debian.org/debian buster/main i386 libpipeline1 i386 1.5.1-2 [33.3 kB] Get: 6 http://cdn-fastly.deb.debian.org/debian buster/main i386 man-db i386 2.8.5-2 [1284 kB] Get: 7 http://cdn-fastly.deb.debian.org/debian buster/main i386 libterm-readkey-perl i386 2.38-1 [28.1 kB] Get: 8 http://cdn-fastly.deb.debian.org/debian buster/main i386 sensible-utils all 0.0.12 [15.8 kB] Get: 9 http://cdn-fastly.deb.debian.org/debian buster/main i386 libexpat1 i386 2.2.6-2 [103 kB] Get: 10 http://cdn-fastly.deb.debian.org/debian buster/main i386 libpng16-16 i386 1.6.36-6 [301 kB] Get: 11 http://cdn-fastly.deb.debian.org/debian buster/main i386 libfreetype6 i386 2.9.1-3 [394 kB] Get: 12 http://cdn-fastly.deb.debian.org/debian buster/main i386 ucf all 3.0038+nmu1 [69.0 kB] Get: 13 http://cdn-fastly.deb.debian.org/debian buster/main i386 fonts-dejavu-core all 2.37-1 [1068 kB] Get: 14 http://cdn-fastly.deb.debian.org/debian buster/main i386 fontconfig-config all 2.13.1-2 [280 kB] Get: 15 http://cdn-fastly.deb.debian.org/debian buster/main i386 libfontconfig1 i386 2.13.1-2 [357 kB] Get: 16 http://cdn-fastly.deb.debian.org/debian buster/main i386 libjpeg62-turbo i386 1:1.5.2-2+b1 [142 kB] Get: 17 http://cdn-fastly.deb.debian.org/debian buster/main i386 libjbig0 i386 2.1-3.1+b2 [31.5 kB] Get: 18 http://cdn-fastly.deb.debian.org/debian buster/main i386 libwebp6 i386 0.6.1-2 [275 kB] Get: 19 http://cdn-fastly.deb.debian.org/debian buster/main i386 libtiff5 i386 4.0.10-4 [268 kB] Get: 20 http://cdn-fastly.deb.debian.org/debian buster/main i386 libxau6 i386 1:1.0.8-1+b2 [20.3 kB] Get: 21 http://cdn-fastly.deb.debian.org/debian buster/main i386 libxdmcp6 i386 1:1.1.2-3 [26.7 kB] Get: 22 http://cdn-fastly.deb.debian.org/debian buster/main i386 libxcb1 i386 1.13.1-2 [141 kB] Get: 23 http://cdn-fastly.deb.debian.org/debian buster/main i386 libx11-data all 2:1.6.7-1 [298 kB] Get: 24 http://cdn-fastly.deb.debian.org/debian buster/main i386 libx11-6 i386 2:1.6.7-1 [778 kB] Get: 25 http://cdn-fastly.deb.debian.org/debian buster/main i386 libxpm4 i386 1:3.5.12-1 [50.9 kB] Get: 26 http://cdn-fastly.deb.debian.org/debian buster/main i386 libgd3 i386 2.2.5-5.2 [141 kB] Get: 27 http://cdn-fastly.deb.debian.org/debian buster/main i386 libgfortran5 i386 8.3.0-6 [549 kB] Get: 28 http://cdn-fastly.deb.debian.org/debian buster/main i386 libgslcblas0 i386 2.5+dfsg-6 [99.2 kB] Get: 29 http://cdn-fastly.deb.debian.org/debian buster/main i386 libgsl23 i386 2.5+dfsg-6 [855 kB] Get: 30 http://cdn-fastly.deb.debian.org/debian buster/main i386 libhdf4-0-alt i386 4.2.13-4 [283 kB] Get: 31 http://cdn-fastly.deb.debian.org/debian buster/main i386 libncurses6 i386 6.1+20181013-2 [109 kB] Get: 32 http://cdn-fastly.deb.debian.org/debian buster/main i386 proj-data all 5.2.0-1 [6986 kB] Get: 33 http://cdn-fastly.deb.debian.org/debian buster/main i386 libproj13 i386 5.2.0-1 [234 kB] Get: 34 http://cdn-fastly.deb.debian.org/debian buster/main i386 pdl i386 1:2.019-5+b1 [3773 kB] Get: 35 http://cdn-fastly.deb.debian.org/debian buster/main i386 libmagic-mgc i386 1:5.35-4 [242 kB] Get: 36 http://cdn-fastly.deb.debian.org/debian buster/main i386 libmagic1 i386 1:5.35-4 [124 kB] Get: 37 http://cdn-fastly.deb.debian.org/debian buster/main i386 file i386 1:5.35-4 [66.3 kB] Get: 38 http://cdn-fastly.deb.debian.org/debian buster/main i386 gettext-base i386 0.19.8.1-9 [124 kB] Get: 39 http://cdn-fastly.deb.debian.org/debian buster/main i386 libsigsegv2 i386 2.12-2 [33.2 kB] Get: 40 http://cdn-fastly.deb.debian.org/debian buster/main i386 m4 i386 1.4.18-2 [205 kB] Get: 41 http://cdn-fastly.deb.debian.org/debian buster/main i386 autoconf all 2.69-11 [341 kB] Get: 42 http://cdn-fastly.deb.debian.org/debian buster/main i386 autotools-dev all 20180224.1 [77.0 kB] Get: 43 http://cdn-fastly.deb.debian.org/debian buster/main i386 automake all 1:1.16.1-4 [771 kB] Get: 44 http://cdn-fastly.deb.debian.org/debian buster/main i386 autopoint all 0.19.8.1-9 [434 kB] Get: 45 http://cdn-fastly.deb.debian.org/debian buster/main i386 libtool all 2.4.6-9 [547 kB] Get: 46 http://cdn-fastly.deb.debian.org/debian buster/main i386 dh-autoreconf all 19 [16.9 kB] Get: 47 http://cdn-fastly.deb.debian.org/debian buster/main i386 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 48 http://cdn-fastly.deb.debian.org/debian buster/main i386 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 49 http://cdn-fastly.deb.debian.org/debian buster/main i386 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 50 http://cdn-fastly.deb.debian.org/debian buster/main i386 libelf1 i386 0.176-1.1 [166 kB] Get: 51 http://cdn-fastly.deb.debian.org/debian buster/main i386 dwz i386 0.12-3 [81.4 kB] Get: 52 http://cdn-fastly.deb.debian.org/debian buster/main i386 libglib2.0-0 i386 2.58.3-2 [1333 kB] Get: 53 http://cdn-fastly.deb.debian.org/debian buster/main i386 libicu63 i386 63.1-6 [8443 kB] Get: 54 http://cdn-fastly.deb.debian.org/debian buster/main i386 libxml2 i386 2.9.4+dfsg1-7+b3 [721 kB] Get: 55 http://cdn-fastly.deb.debian.org/debian buster/main i386 libcroco3 i386 0.6.12-3 [151 kB] Get: 56 http://cdn-fastly.deb.debian.org/debian buster/main i386 gettext i386 0.19.8.1-9 [1314 kB] Get: 57 http://cdn-fastly.deb.debian.org/debian buster/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 58 http://cdn-fastly.deb.debian.org/debian buster/main i386 po-debconf all 1.0.21 [248 kB] Get: 59 http://cdn-fastly.deb.debian.org/debian buster/main i386 debhelper all 12.1.1 [1016 kB] Get: 60 http://cdn-fastly.deb.debian.org/debian buster/main i386 hdf5-helpers i386 1.10.4+repack-10 [35.2 kB] Get: 61 http://cdn-fastly.deb.debian.org/debian buster/main i386 libaec0 i386 1.0.2-1 [22.6 kB] Get: 62 http://cdn-fastly.deb.debian.org/debian buster/main i386 libsz2 i386 1.0.2-1 [6720 B] Get: 63 http://cdn-fastly.deb.debian.org/debian buster/main i386 libaec-dev i386 1.0.2-1 [21.4 kB] Get: 64 http://cdn-fastly.deb.debian.org/debian buster/main i386 libkeyutils1 i386 1.6-6 [15.4 kB] Get: 65 http://cdn-fastly.deb.debian.org/debian buster/main i386 libkrb5support0 i386 1.17-3 [68.6 kB] Get: 66 http://cdn-fastly.deb.debian.org/debian buster/main i386 libk5crypto3 i386 1.17-3 [126 kB] Get: 67 http://cdn-fastly.deb.debian.org/debian buster/main i386 libssl1.1 i386 1.1.1c-1 [1532 kB] Get: 68 http://cdn-fastly.deb.debian.org/debian buster/main i386 libkrb5-3 i386 1.17-3 [396 kB] Get: 69 http://cdn-fastly.deb.debian.org/debian buster/main i386 libgssapi-krb5-2 i386 1.17-3 [168 kB] Get: 70 http://cdn-fastly.deb.debian.org/debian buster/main i386 libsasl2-modules-db i386 2.1.27+dfsg-1 [69.9 kB] Get: 71 http://cdn-fastly.deb.debian.org/debian buster/main i386 libsasl2-2 i386 2.1.27+dfsg-1 [109 kB] Get: 72 http://cdn-fastly.deb.debian.org/debian buster/main i386 libldap-common all 2.4.47+dfsg-3 [89.4 kB] Get: 73 http://cdn-fastly.deb.debian.org/debian buster/main i386 libldap-2.4-2 i386 2.4.47+dfsg-3 [236 kB] Get: 74 http://cdn-fastly.deb.debian.org/debian buster/main i386 libnghttp2-14 i386 1.36.0-2 [90.3 kB] Get: 75 http://cdn-fastly.deb.debian.org/debian buster/main i386 libpsl5 i386 0.20.2-2 [54.4 kB] Get: 76 http://cdn-fastly.deb.debian.org/debian buster/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2 [64.2 kB] Get: 77 http://cdn-fastly.deb.debian.org/debian buster/main i386 libssh2-1 i386 1.8.0-2.1 [147 kB] Get: 78 http://cdn-fastly.deb.debian.org/debian buster/main i386 libcurl3-gnutls i386 7.64.0-4 [355 kB] Get: 79 http://cdn-fastly.deb.debian.org/debian buster/main i386 libcurl4-gnutls-dev i386 7.64.0-4 [453 kB] Get: 80 http://cdn-fastly.deb.debian.org/debian buster/main i386 libhdf5-103 i386 1.10.4+repack-10 [1310 kB] Get: 81 http://cdn-fastly.deb.debian.org/debian buster/main i386 libhdf5-cpp-103 i386 1.10.4+repack-10 [155 kB] Get: 82 http://cdn-fastly.deb.debian.org/debian buster/main i386 zlib1g-dev i386 1:1.2.11.dfsg-1 [216 kB] Get: 83 http://cdn-fastly.deb.debian.org/debian buster/main i386 libjpeg62-turbo-dev i386 1:1.5.2-2+b1 [226 kB] Get: 84 http://cdn-fastly.deb.debian.org/debian buster/main i386 libjpeg-dev all 1:1.5.2-2 [57.5 kB] Get: 85 http://cdn-fastly.deb.debian.org/debian buster/main i386 libhdf5-dev i386 1.10.4+repack-10 [2738 kB] Get: 86 http://cdn-fastly.deb.debian.org/debian buster/main i386 libnetcdf13 i386 1:4.6.2-1 [440 kB] Get: 87 http://cdn-fastly.deb.debian.org/debian buster/main i386 libnetcdf-dev i386 1:4.6.2-1 [82.7 kB] Fetched 46.2 MB in 10s (4402 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19231 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_i386.deb ... Unpacking libbsd0:i386 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_i386.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../02-libuchardet0_0.0.6-3_i386.deb ... Unpacking libuchardet0:i386 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_i386.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../04-libpipeline1_1.5.1-2_i386.deb ... Unpacking libpipeline1:i386 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_i386.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package libterm-readkey-perl. Preparing to unpack .../06-libterm-readkey-perl_2.38-1_i386.deb ... Unpacking libterm-readkey-perl (2.38-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../07-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../08-libexpat1_2.2.6-2_i386.deb ... Unpacking libexpat1:i386 (2.2.6-2) ... Selecting previously unselected package libpng16-16:i386. Preparing to unpack .../09-libpng16-16_1.6.36-6_i386.deb ... Unpacking libpng16-16:i386 (1.6.36-6) ... Selecting previously unselected package libfreetype6:i386. Preparing to unpack .../10-libfreetype6_2.9.1-3_i386.deb ... Unpacking libfreetype6:i386 (2.9.1-3) ... Selecting previously unselected package ucf. Preparing to unpack .../11-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../12-fonts-dejavu-core_2.37-1_all.deb ... Unpacking fonts-dejavu-core (2.37-1) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../13-fontconfig-config_2.13.1-2_all.deb ... Unpacking fontconfig-config (2.13.1-2) ... Selecting previously unselected package libfontconfig1:i386. Preparing to unpack .../14-libfontconfig1_2.13.1-2_i386.deb ... Unpacking libfontconfig1:i386 (2.13.1-2) ... Selecting previously unselected package libjpeg62-turbo:i386. Preparing to unpack .../15-libjpeg62-turbo_1%3a1.5.2-2+b1_i386.deb ... Unpacking libjpeg62-turbo:i386 (1:1.5.2-2+b1) ... Selecting previously unselected package libjbig0:i386. Preparing to unpack .../16-libjbig0_2.1-3.1+b2_i386.deb ... Unpacking libjbig0:i386 (2.1-3.1+b2) ... Selecting previously unselected package libwebp6:i386. Preparing to unpack .../17-libwebp6_0.6.1-2_i386.deb ... Unpacking libwebp6:i386 (0.6.1-2) ... Selecting previously unselected package libtiff5:i386. Preparing to unpack .../18-libtiff5_4.0.10-4_i386.deb ... Unpacking libtiff5:i386 (4.0.10-4) ... Selecting previously unselected package libxau6:i386. Preparing to unpack .../19-libxau6_1%3a1.0.8-1+b2_i386.deb ... Unpacking libxau6:i386 (1:1.0.8-1+b2) ... Selecting previously unselected package libxdmcp6:i386. Preparing to unpack .../20-libxdmcp6_1%3a1.1.2-3_i386.deb ... Unpacking libxdmcp6:i386 (1:1.1.2-3) ... 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Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Setting up debhelper (12.1.1) ... Processing triggers for libc-bin (2.28-10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/libpdl-netcdf-perl-4.20/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package libpdl-netcdf-perl dpkg-buildpackage: info: source version 4.20-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Bas Couwenberg dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --parallel dh_auto_clean -O--parallel dh_clean -O--parallel debian/rules build dh build --parallel dh_update_autotools_config -O--parallel dh_auto_configure -O--parallel perl -I. Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -ffile-prefix-map=/build/libpdl-netcdf-perl-4.20=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -ffunction-sections -Wdate-time -D_FORTIFY_SOURCE=2" "LD=i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/build/libpdl-netcdf-perl-4.20=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -ffunction-sections -Wl,-z,relro -Wl,-z,now -Wl,--as-needed" Found libnetcdf.so at /usr/lib/i386-linux-gnu/libnetcdf.so Found netcdf.h at /usr/include/netcdf.h Defining bool=int (linux seems to need this) Trying: i686-linux-gnu-gcc -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include -L/usr/lib/i386-linux-gnu -lnetcdf temp.c -o temp nc_inq_var_deflate function found, HDF library installed available! Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for PDL::NetCDF Writing MYMETA.yml and MYMETA.json debian/rules override_dh_auto_build make[1]: Entering directory '/build/libpdl-netcdf-perl-4.20' LD_RUN_PATH="" dh_auto_build make -j18 make[2]: Entering directory '/build/libpdl-netcdf-perl-4.20' "/usr/bin/perl" "-I/usr/lib/i386-linux-gnu/perl5/5.28" "-MPDL::PP qw[PDL::NetCDF PDL::NetCDF NetCDF]" netcdf.pd Running Mkbootstrap for NetCDF () chmod 644 "NetCDF.bs" "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- NetCDF.bs blib/arch/auto/PDL/NetCDF/NetCDF.bs 644 touch NetCDF.xs "/usr/bin/perl" "/usr/share/perl/5.28/ExtUtils/xsubpp" -typemap '/usr/share/perl/5.28/ExtUtils/typemap' -typemap '/usr/lib/i386-linux-gnu/perl5/5.28/PDL/Core/typemap.pdl' -typemap '/build/libpdl-netcdf-perl-4.20/typemap' NetCDF.xs > NetCDF.xsc cp NetCDF.pm blib/lib/PDL/NetCDF.pm mv NetCDF.xsc NetCDF.c i686-linux-gnu-gcc -c "-I/usr/lib/i386-linux-gnu/perl5/5.28/PDL/Core" -I/usr/include -Dbool=int -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -ffile-prefix-map=/build/libpdl-netcdf-perl-4.20=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -ffunction-sections -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"4.20\" -DXS_VERSION=\"4.20\" -fPIC "-I/usr/lib/i386-linux-gnu/perl/5.28/CORE" NetCDF.c NetCDF.xs: In function 'XS_PDL__NetCDF_nc_put_att_schar': NetCDF.xs:687:55: warning: pointer targets in passing argument 6 of 'nc_put_att_schar' differ in signedness [-Wpointer-sign] RETVAL = nc_put_att_schar (ncid,varid,name,xtype,len,(char *)op->data); ^~~~~~~~~~~~~~~~ In file included from NetCDF.xs:37: /usr/include/netcdf.h:1042:1: note: expected 'const signed char *' but argument is of type 'char *' nc_put_att_schar(int ncid, int varid, const char *name, nc_type xtype, ^~~~~~~~~~~~~~~~ NetCDF.xs: In function 'XS_PDL__NetCDF_nc_get_att_schar': NetCDF.xs:705:45: warning: pointer targets in passing argument 4 of 'nc_get_att_schar' differ in signedness [-Wpointer-sign] RETVAL = nc_get_att_schar (ncid,varid,name,(char *)ip->data); ^~~~~~~~~~~~~~~~ In file included from NetCDF.xs:37: /usr/include/netcdf.h:1046:1: note: expected 'signed char *' but argument is of type 'char *' nc_get_att_schar(int ncid, int varid, const char *name, signed char *ip); ^~~~~~~~~~~~~~~~ NetCDF.xs: In function 'XS_PDL__NetCDF_nc_put_vara_schar': NetCDF.xs:1197:55: warning: pointer targets in passing argument 5 of 'nc_put_vara_schar' differ in signedness [-Wpointer-sign] RETVAL = nc_put_vara_schar (ncid,varid,startp,countp,(char *)op->data); ^~~~~~~~~~~~~~~~ In file included from NetCDF.xs:37: /usr/include/netcdf.h:1270:1: note: expected 'const signed char *' but argument is of type 'char *' nc_put_vara_schar(int ncid, int varid, const size_t *startp, ^~~~~~~~~~~~~~~~~ NetCDF.xs: In function 'XS_PDL__NetCDF_nc_get_vara_schar': NetCDF.xs:1219:55: warning: pointer targets in passing argument 5 of 'nc_get_vara_schar' differ in signedness [-Wpointer-sign] RETVAL = nc_get_vara_schar (ncid,varid,startp,countp,(char *)ip->data); ^~~~~~~~~~~~~~~~ In file included from NetCDF.xs:37: /usr/include/netcdf.h:1274:1: note: expected 'signed char *' but argument is of type 'char *' nc_get_vara_schar(int ncid, int varid, const size_t *startp, ^~~~~~~~~~~~~~~~~ NetCDF.xs: In function 'XS_PDL__NetCDF_nc_put_var_schar': NetCDF.xs:1529:40: warning: pointer targets in passing argument 3 of 'nc_put_var_schar' differ in signedness [-Wpointer-sign] RETVAL = nc_put_var_schar (ncid,varid,(char *)op->data); ^~~~~~~~~~~~~~~~ In file included from NetCDF.xs:37: /usr/include/netcdf.h:1639:1: note: expected 'const signed char *' but argument is of type 'char *' nc_put_var_schar(int ncid, int varid, const signed char *op); ^~~~~~~~~~~~~~~~ NetCDF.xs: In function 'XS_PDL__NetCDF_nc_get_var_schar': NetCDF.xs:1546:40: warning: pointer targets in passing argument 3 of 'nc_get_var_schar' differ in signedness [-Wpointer-sign] RETVAL = nc_get_var_schar (ncid,varid,(char *)ip->data); ^~~~~~~~~~~~~~~~ In file included from NetCDF.xs:37: /usr/include/netcdf.h:1642:1: note: expected 'signed char *' but argument is of type 'char *' nc_get_var_schar(int ncid, int varid, signed char *ip); ^~~~~~~~~~~~~~~~ NetCDF.xs: In function 'XS_PDL__NetCDF_c_putrec': NetCDF.xs:2116:55: warning: pointer targets in passing argument 4 of 'nc_put_var1_schar' differ in signedness [-Wpointer-sign] rc = nc_put_var1_schar (ncid, varid, nc_index, &c_elem); ^~~~~~~ In file included from NetCDF.xs:37: /usr/include/netcdf.h:1171:1: note: expected 'const signed char *' but argument is of type 'char *' nc_put_var1_schar(int ncid, int varid, const size_t *indexp, ^~~~~~~~~~~~~~~~~ NetCDF.xs:2135:61: warning: pointer targets in passing argument 4 of 'nc_put_var1_ulonglong' differ in signedness [-Wpointer-sign] rc = nc_put_var1_ulonglong (ncid, varid, nc_index, &ll_elem); ^~~~~~~~ In file included from NetCDF.xs:37: /usr/include/netcdf.h:1235:1: note: expected 'const long long unsigned int *' but argument is of type 'long long int *' nc_put_var1_ulonglong(int ncid, int varid, const size_t *indexp, ^~~~~~~~~~~~~~~~~~~~~ NetCDF.xs:2086:21: warning: variable 'ull_elem' set but not used [-Wunused-but-set-variable] unsigned longlong ull_elem; ^~~~~~~~ In file included from NetCDF.xs:23: /usr/lib/i386-linux-gnu/perl/5.28/CORE/XSUB.h:177:28: warning: unused variable 'targ' [-Wunused-variable] #define dXSTARG SV * const targ = ((PL_op->op_private & OPpENTERSUB_HASTARG) \ ^~~~ /usr/lib/i386-linux-gnu/perl/5.28/CORE/XSUB.h:177:28: note: in definition of macro 'dXSTARG' #define dXSTARG SV * const targ = ((PL_op->op_private & OPpENTERSUB_HASTARG) \ ^~~~ NetCDF.c:3168:6: warning: unused variable 'RETVAL' [-Wunused-variable] int RETVAL; ^~~~~~ NetCDF.xs: In function 'XS_PDL__NetCDF_c_getrec': NetCDF.xs:2204:54: warning: pointer targets in passing argument 4 of 'nc_get_var1_schar' differ in signedness [-Wpointer-sign] rc = nc_get_var1_schar (ncid, varid, nc_index, &c_elem); ^~~~~~~ In file included from NetCDF.xs:37: /usr/include/netcdf.h:1175:1: note: expected 'signed char *' but argument is of type 'char *' nc_get_var1_schar(int ncid, int varid, const size_t *indexp, ^~~~~~~~~~~~~~~~~ NetCDF.xs:2217:55: warning: pointer targets in passing argument 4 of 'nc_get_var1_uint' differ in signedness [-Wpointer-sign] rc = nc_get_var1_uint (ncid, varid, nc_index, &i_elem); ^~~~~~~ In file included from NetCDF.xs:37: /usr/include/netcdf.h:1223:1: note: expected 'unsigned int *' but argument is of type 'int *' nc_get_var1_uint(int ncid, int varid, const size_t *indexp, ^~~~~~~~~~~~~~~~ NetCDF.xs:2223:60: warning: pointer targets in passing argument 4 of 'nc_get_var1_ulonglong' differ in signedness [-Wpointer-sign] rc = nc_get_var1_ulonglong (ncid, varid, nc_index, &ll_elem); ^~~~~~~~ In file included from NetCDF.xs:37: /usr/include/netcdf.h:1239:1: note: expected 'long long unsigned int *' but argument is of type 'long long int *' nc_get_var1_ulonglong(int ncid, int varid, const size_t *indexp, ^~~~~~~~~~~~~~~~~~~~~ In file included from NetCDF.xs:23: /usr/lib/i386-linux-gnu/perl/5.28/CORE/XSUB.h:177:28: warning: unused variable 'targ' [-Wunused-variable] #define dXSTARG SV * const targ = ((PL_op->op_private & OPpENTERSUB_HASTARG) \ ^~~~ /usr/lib/i386-linux-gnu/perl/5.28/CORE/XSUB.h:177:28: note: in definition of macro 'dXSTARG' #define dXSTARG SV * const targ = ((PL_op->op_private & OPpENTERSUB_HASTARG) \ ^~~~ NetCDF.c:3276:6: warning: unused variable 'RETVAL' [-Wunused-variable] int RETVAL; ^~~~~~ NetCDF.xs: In function 'boot_PDL__NetCDF': NetCDF.xs:2264:23: warning: format '%d' expects argument of type 'int', but argument 3 has type 'I32' {aka 'long int'} [-Wformat=] Perl_croak(aTHX_ "[PDL->Version: %d PDL_CORE_VERSION: %d XS_VERSION: %s] PDL::NetCDF needs to be recompiled against the newly installed PDL", PDL->Version, PDL_CORE_VERSION, XS_VERSION); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~ rm -f blib/arch/auto/PDL/NetCDF/NetCDF.so i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/build/libpdl-netcdf-perl-4.20=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -ffunction-sections -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -L/usr/local/lib -fstack-protector-strong NetCDF.o -o blib/arch/auto/PDL/NetCDF/NetCDF.so \ -L/usr/lib/i386-linux-gnu -lnetcdf \ chmod 755 blib/arch/auto/PDL/NetCDF/NetCDF.so Manifying 1 pod document make[2]: Leaving directory '/build/libpdl-netcdf-perl-4.20' make[1]: Leaving directory '/build/libpdl-netcdf-perl-4.20' debian/rules override_dh_auto_test make[1]: Entering directory '/build/libpdl-netcdf-perl-4.20' TEST_VERBOSE=1 DISPLAY="" dh_auto_test make -j18 test TEST_VERBOSE=1 make[2]: Entering directory '/build/libpdl-netcdf-perl-4.20' "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- NetCDF.bs blib/arch/auto/PDL/NetCDF/NetCDF.bs 644 PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/01-Netcdf3.t .. 1..52 ok 1 - use PDL; ok 2 - use PDL::NetCDF; ok 3 - use PDL::Char; ok 4 - PDL::NetCDF should complain when opening nonexistent file when O_RDONLY is in effect ok 5 - PDL::NetCDF must not create new file when O_RDONLY is in effect ok 6 - setrec/recput/recget OK ok 7 - Correctly failed to put record with illegal index ok 8 - Correctly failed to create record with mis-matched variable sizes ok 9 - puttext 1 ok 10 - puttext 2 ok 11 - zeroDim ok 12 - puttext 3 ok 13 - Dimension redefinition error ok 14 - PDL::Char 1 ok 15 - PDL::Char 2 ok 16 - Compressed put/get 1 ok 17 - Compressed put/get 2 ok 18 - Compressed put/get 3 ok 19 - Fast open 1 ok 20 - Fast open 2 ok 21 - Re-writing 1 ok 22 - Re-writing 2 ok 23 - 2D put/get 1 ok 24 - 2D put/get 2 ok 25 - Putatt 1 ok 26 - Putatt 2 ok 27 - Putatt 3 ok 28 - Getatt 1 ok 29 - Getatt 2 ok 30 - Putatt text ok 31 - Badvals 1 ok 32 - Badvals 2 ok 33 - Putslice 1 ok 34 - Putslice PDL::Char 1 ok 35 - Putslice PDL::Char 2 ok 36 - Putslice short 1 ok 37 - Putslice short 2 ok 38 - Get slice 1 ok 39 - Get slice 2 ok 40 - Get slice 3 ok 41 - uncompressed variable ok 42 - unshuffled variable ok 43 - Read bogus file [ 'abc' 'defg' 'hijkl' ] ok 44 - chars with unlimited dimension ok 45 - Getting a slice of a PDL::Char with unlimited dimension ok 46 - Getting exactly one string from nc with unlimited dimension ok 47 - adding dimless char variable ok 48 - adding dimless double variable ok 49 - sync working ok 50 - close is idempotent ok 51 - slicing different strings ok 52 - reading 3dim strings complete # Removing test file bogus.nc # Removing test file foo.nc # Removing test file foo1.nc ok t/02-Netcdf4.t .. 1..21 ok 1 - use PDL::NetCDF; ok 2 - isNetcdf4 function defined ok 3 - classic format is default ok 4 - classic format is still default ok 5 - An object of class 'PDL::NetCDF' isa 'PDL::NetCDF' ok 6 - foo.nc4 is netcdf4 ok 7 $VAR1 = { 'varchar1' => 4, 'var2' => 6, 'var1' => 0, 'cpi' => 5, 'svar' => 8, 'zeroDim' => 2, 'textvar' => 1, 'tvar' => 7, 'varchar' => 3, 'GLOBAL' => -1 }; ok 8 - uncompressed variable ok 9 - unshuffled variable ok 10 - got old format ok 11 - switching default-format ok 12 - An object of class 'PDL::NetCDF' isa 'PDL::NetCDF' ok 13 - t/bar.nc4 is netcdf4 ok 14 - t/bar.nc4 is netcdf4 ok 15 - put with deflate ok 16 - deflateShuffle for var1 ok 17 - putslice with deflate ok 18 - sync on nc4 ok 19 - deflateShuffle for var2 ok 20 - get deflated variable ok 21 - write/read equal ok All tests successful. Files=2, Tests=73, 0 wallclock secs ( 0.02 usr 0.00 sys + 0.26 cusr 0.02 csys = 0.30 CPU) Result: PASS make[2]: Leaving directory '/build/libpdl-netcdf-perl-4.20' make[1]: Leaving directory '/build/libpdl-netcdf-perl-4.20' fakeroot debian/rules binary dh binary --parallel dh_testroot -O--parallel dh_prep -O--parallel dh_auto_install -O--parallel make -j18 install DESTDIR=/build/libpdl-netcdf-perl-4.20/debian/libpdl-netcdf-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/libpdl-netcdf-perl-4.20' "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- NetCDF.bs blib/arch/auto/PDL/NetCDF/NetCDF.bs 644 Manifying 1 pod document Files found in blib/arch: installing files in blib/lib into architecture dependent library tree Installing /build/libpdl-netcdf-perl-4.20/debian/libpdl-netcdf-perl/usr/lib/i386-linux-gnu/perl5/5.28/auto/PDL/NetCDF/NetCDF.so Installing /build/libpdl-netcdf-perl-4.20/debian/libpdl-netcdf-perl/usr/lib/i386-linux-gnu/perl5/5.28/PDL/NetCDF.pm Installing /build/libpdl-netcdf-perl-4.20/debian/libpdl-netcdf-perl/usr/share/man/man3/PDL::NetCDF.3pm Updating PDL documentation database... "/usr/bin/perl" -e 'exit if $ENV{DESTDIR}; use PDL::Doc; eval { PDL::Doc::add_module(q{PDL::NetCDF}); }; '; make[1]: Leaving directory '/build/libpdl-netcdf-perl-4.20' debian/rules override_dh_install make[1]: Entering directory '/build/libpdl-netcdf-perl-4.20' dh_install --list-missing dh_install: Please use dh_missing --list-missing/--fail-missing instead dh_install: This feature will be removed in compat 12. make[1]: Leaving directory '/build/libpdl-netcdf-perl-4.20' debian/rules override_dh_installdocs make[1]: Entering directory '/build/libpdl-netcdf-perl-4.20' dh_installdocs README make[1]: Leaving directory '/build/libpdl-netcdf-perl-4.20' debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/libpdl-netcdf-perl-4.20' dh_installchangelogs Changes make[1]: Leaving directory '/build/libpdl-netcdf-perl-4.20' dh_installman -O--parallel dh_installinit -O--parallel debian/rules override_dh_perl make[1]: Entering directory '/build/libpdl-netcdf-perl-4.20' dh_perl dh_pdl make[1]: Leaving directory '/build/libpdl-netcdf-perl-4.20' dh_link -O--parallel dh_strip_nondeterminism -O--parallel dh_compress -O--parallel dh_fixperms -O--parallel dh_missing -O--parallel dh_strip -O--parallel dh_makeshlibs -O--parallel dh_shlibdeps -O--parallel dh_installdeb -O--parallel dh_gencontrol -O--parallel dh_md5sums -O--parallel dh_builddeb -O--parallel dpkg-deb: building package 'libpdl-netcdf-perl' in '../libpdl-netcdf-perl_4.20-6_i386.deb'. dpkg-deb: building package 'libpdl-netcdf-perl-dbgsym' in '../libpdl-netcdf-perl-dbgsym_4.20-6_i386.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../libpdl-netcdf-perl_4.20-6_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/10641 and its subdirectories I: Current time: Wed Aug 12 02:59:32 -12 2020 I: pbuilder-time-stamp: 1597244372