W: cgroups are not available on the host, not using them. unshare: unshare failed: Cannot allocate memory W: pbuilder: unshare CLONE_NEWNET not available I: pbuilder: network access is available during build! I: Current time: Thu Jul 16 10:03:52 +14 2020 I: pbuilder-time-stamp: 1594843432 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [liggghts_3.8.0+repack1-4.dsc] I: copying [./liggghts_3.8.0+repack1.orig.tar.xz] I: copying [./liggghts_3.8.0+repack1-4.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Wed Jan 23 09:41:16 2019 +14 gpgv: using RSA key BBBD45EA818AB86FF67E7285D3E17383CFA7FF06 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./liggghts_3.8.0+repack1-4.dsc dpkg-source: info: extracting liggghts in liggghts-3.8.0+repack1 dpkg-source: info: unpacking liggghts_3.8.0+repack1.orig.tar.xz dpkg-source: info: unpacking liggghts_3.8.0+repack1-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 01_add_cmake_files.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/17450/tmp/hooks/D01_modify_environment starting debug: Running on profitbricks-build12-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/17450/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/17450/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="0" [2]="3" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.0.3(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=10' DIRSTACK=() DISTRIBUTION= EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=17450 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.exPzEDBkX0/pbuilderrc_EsQB --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.exPzEDBkX0/b2 --logfile b2/build.log liggghts_3.8.0+repack1-4.dsc' SUDO_GID=112 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://78.137.99.97:3128 I: uname -a Linux i-capture-the-hostname 4.19.0-9-686-pae #1 SMP Debian 4.19.118-2+deb10u1 (2020-06-07) i686 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1302248 Apr 18 2019 bash -rwxr-xr-x 3 root root 38280 Jul 11 2019 bunzip2 -rwxr-xr-x 3 root root 38280 Jul 11 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 11 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 11 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 11 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 25 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 11 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 11 2019 bzgrep -rwxr-xr-x 3 root root 38280 Jul 11 2019 bzip2 -rwxr-xr-x 1 root root 17768 Jul 11 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 11 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 11 2019 bzmore -rwxr-xr-x 1 root root 38692 Mar 1 2019 cat -rwxr-xr-x 1 root root 75588 Mar 1 2019 chgrp -rwxr-xr-x 1 root root 63268 Mar 1 2019 chmod -rwxr-xr-x 1 root root 75588 Mar 1 2019 chown -rwxr-xr-x 1 root root 153732 Mar 1 2019 cp -rwxr-xr-x 1 root root 132820 Jan 18 2019 dash -rwxr-xr-x 1 root root 120676 Mar 1 2019 date -rwxr-xr-x 1 root root 92040 Mar 1 2019 dd -rwxr-xr-x 1 root root 100620 Mar 1 2019 df -rwxr-xr-x 1 root root 149736 Mar 1 2019 dir -rwxr-xr-x 1 root root 79412 Jan 10 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 27 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 27 2018 domainname -> hostname -rwxr-xr-x 1 root root 34532 Mar 1 2019 echo -rwxr-xr-x 1 root root 28 Jan 8 2019 egrep -rwxr-xr-x 1 root root 34532 Mar 1 2019 false -rwxr-xr-x 1 root root 28 Jan 8 2019 fgrep -rwxr-xr-x 1 root root 67700 Jan 10 2019 findmnt -rwsr-xr-x 1 root root 30112 Apr 23 09:38 fusermount -rwxr-xr-x 1 root root 206392 Jan 8 2019 grep -rwxr-xr-x 2 root root 2345 Jan 6 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 6 2019 gzexe -rwxr-xr-x 1 root root 100952 Jan 6 2019 gzip -rwxr-xr-x 1 root root 21916 Sep 27 2018 hostname -rwxr-xr-x 1 root root 79752 Mar 1 2019 ln -rwxr-xr-x 1 root root 55400 Jul 27 2018 login -rwxr-xr-x 1 root root 149736 Mar 1 2019 ls -rwxr-xr-x 1 root root 112032 Jan 10 2019 lsblk -rwxr-xr-x 1 root root 87972 Mar 1 2019 mkdir -rwxr-xr-x 1 root root 79748 Mar 1 2019 mknod -rwxr-xr-x 1 root root 46916 Mar 1 2019 mktemp -rwxr-xr-x 1 root root 42348 Jan 10 2019 more -rwsr-xr-x 1 root root 50592 Jan 10 2019 mount -rwxr-xr-x 1 root root 13724 Jan 10 2019 mountpoint -rwxr-xr-x 1 root root 157832 Mar 1 2019 mv lrwxrwxrwx 1 root root 8 Sep 27 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 15 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38660 Mar 1 2019 pwd lrwxrwxrwx 1 root root 4 Apr 18 2019 rbash -> bash -rwxr-xr-x 1 root root 46852 Mar 1 2019 readlink -rwxr-xr-x 1 root root 75588 Mar 1 2019 rm -rwxr-xr-x 1 root root 42756 Mar 1 2019 rmdir -rwxr-xr-x 1 root root 22276 Jan 22 2019 run-parts -rwxr-xr-x 1 root root 125036 Dec 23 2018 sed lrwxrwxrwx 1 root root 4 Jul 16 10:06 sh -> bash lrwxrwxrwx 1 root root 4 Jul 14 22:25 sh.distrib -> dash -rwxr-xr-x 1 root root 34532 Mar 1 2019 sleep -rwxr-xr-x 1 root root 79652 Mar 1 2019 stty -rwsr-xr-x 1 root root 71072 Jan 10 2019 su -rwxr-xr-x 1 root root 34564 Mar 1 2019 sync -rwxr-xr-x 1 root root 504024 Apr 24 2019 tar -rwxr-xr-x 1 root root 13860 Jan 22 2019 tempfile -rwxr-xr-x 1 root root 104292 Mar 1 2019 touch -rwxr-xr-x 1 root root 34532 Mar 1 2019 true -rwxr-xr-x 1 root root 17768 Apr 23 09:38 ulockmgr_server -rwsr-xr-x 1 root root 30108 Jan 10 2019 umount -rwxr-xr-x 1 root root 34532 Mar 1 2019 uname -rwxr-xr-x 2 root root 2345 Jan 6 2019 uncompress -rwxr-xr-x 1 root root 149736 Mar 1 2019 vdir -rwxr-xr-x 1 root root 34208 Jan 10 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 22 2019 which lrwxrwxrwx 1 root root 8 Sep 27 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 6 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 6 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 6 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 6 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 6 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 6 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 6 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 6 2019 zless -rwxr-xr-x 1 root root 1841 Jan 6 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 6 2019 znew I: user script /srv/workspace/pbuilder/17450/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: cmake, debhelper (>= 11~), libboost-mpi-dev, libeigen3-dev, libjpeg-dev, libpython-dev, libvtk6-dev, mpi-default-bin, mpi-default-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19234 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on debhelper (>= 11~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on libboost-mpi-dev; however: Package libboost-mpi-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev; however: Package libeigen3-dev is not installed. pbuilder-satisfydepends-dummy depends on libjpeg-dev; however: Package libjpeg-dev is not installed. pbuilder-satisfydepends-dummy depends on libpython-dev; however: Package libpython-dev is not installed. pbuilder-satisfydepends-dummy depends on libvtk6-dev; however: Package libvtk6-dev is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-bin; however: Package mpi-default-bin is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-dev; however: Package mpi-default-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} cmake{a} cmake-data{a} cython{a} debhelper{a} default-libmysqlclient-dev{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} gdal-data{a} gettext{a} gettext-base{a} groff-base{a} hdf5-helpers{a} ibverbs-providers{a} icu-devtools{a} intltool-debian{a} iso-codes{a} libaec-dev{a} libaec0{a} libaom0{a} libarchive-zip-perl{a} libarchive13{a} libarmadillo-dev{a} libarmadillo9{a} libarpack2{a} libarpack2-dev{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libavcodec-dev{a} libavcodec58{a} libavformat-dev{a} libavformat58{a} libavutil-dev{a} libavutil56{a} libblas-dev{a} libblas3{a} libbluray2{a} libboost-dev{a} libboost-mpi-dev{a} libboost-mpi1.67-dev{a} libboost-mpi1.67.0{a} libboost-serialization1.67-dev{a} libboost-serialization1.67.0{a} libboost1.67-dev{a} libbrotli1{a} libbsd0{a} libcairo2{a} libcap2{a} libcap2-bin{a} libcharls-dev{a} libcharls2{a} libchromaprint1{a} libcodec2-0.8.1{a} libcroco3{a} libcrystalhd3{a} libcups2{a} libcurl3-gnutls{a} libcurl4{a} libcurl4-gnutls-dev{a} libdap-dev{a} libdap25{a} libdapclient6v5{a} libdapserver7v5{a} libdatrie1{a} libdbus-1-3{a} libdouble-conversion1{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-dev{a} libdrm-intel1{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libegl-mesa0{a} libegl1{a} libeigen3-dev{a} libelf1{a} libepsilon-dev{a} libepsilon1{a} libevdev2{a} libevent-2.1-6{a} libevent-core-2.1-6{a} libevent-pthreads-2.1-6{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfontconfig1-dev{a} libfreetype6{a} libfreetype6-dev{a} libfreexl-dev{a} libfreexl1{a} libfribidi0{a} libfyba-dev{a} libfyba0{a} libgbm1{a} libgdal-dev{a} libgdal20{a} libgdk-pixbuf2.0-0{a} libgdk-pixbuf2.0-common{a} libgeos-3.7.1{a} libgeos-c1v5{a} libgeos-dev{a} libgeotiff-dev{a} libgeotiff2{a} libgfortran5{a} libgif-dev{a} libgif7{a} libgl1{a} libgl1-mesa-dev{a} libgl1-mesa-dri{a} libgl2ps-dev{a} libgl2ps1.4{a} libglapi-mesa{a} libgles1{a} libgles2{a} libglib2.0-0{a} libglu1-mesa{a} libglu1-mesa-dev{a} libglvnd-core-dev{a} libglvnd-dev{a} libglvnd0{a} libglx-mesa0{a} libglx0{a} libgme0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0{a} libgnutls-openssl27{a} libgnutls28-dev{a} libgnutlsxx28{a} libgraphite2-3{a} libgsm1{a} libgssapi-krb5-2{a} libgstreamer-plugins-base1.0-0{a} libgstreamer1.0-0{a} libgudev-1.0-0{a} libharfbuzz0b{a} libhdf4-0-alt{a} libhdf4-alt-dev{a} libhdf5-103{a} libhdf5-cpp-103{a} libhdf5-dev{a} libhdf5-mpi-dev{a} libhdf5-openmpi-103{a} libhdf5-openmpi-dev{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc5{a} libhyphen0{a} libibverbs-dev{a} libibverbs1{a} libice-dev{a} libice6{a} libicu-dev{a} libicu63{a} libidn2-dev{a} libinput-bin{a} libinput10{a} libjbig-dev{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-c-dev{a} libjson-c3{a} libjsoncpp-dev{a} libjsoncpp1{a} libk5crypto3{a} libkeyutils1{a} libkml-dev{a} libkmlbase1{a} libkmlconvenience1{a} libkmldom1{a} libkmlengine1{a} libkmlregionator1{a} libkmlxsd1{a} libkrb5-3{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} liblcms2-2{a} libldap-2.4-2{a} libldap-common{a} libllvm7{a} libltdl-dev{a} libltdl7{a} liblzma-dev{a} libmagic-mgc{a} libmagic1{a} libmariadb-dev{a} libmariadb-dev-compat{a} libmariadb3{a} libminizip-dev{a} libminizip1{a} libmp3lame0{a} libmpg123-0{a} libmtdev1{a} libncurses6{a} libnetcdf-c++4{a} libnetcdf-cxx-legacy-dev{a} libnetcdf-dev{a} libnetcdf13{a} libnghttp2-14{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnspr4{a} libnss3{a} libnuma-dev{a} libnuma1{a} libodbc1{a} libogdi3.2{a} libogdi3.2-dev{a} libogg-dev{a} libogg0{a} libopengl0{a} libopenjp2-7{a} libopenjp2-7-dev{a} libopenmpi-dev{a} libopenmpi3{a} libopenmpt0{a} libopus0{a} liborc-0.4-0{a} libp11-kit-dev{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpciaccess0{a} libpcre16-3{a} libpcre2-16-0{a} libpcre3-dev{a} libpcre32-3{a} libpcrecpp0v5{a} libpipeline1{a} libpixman-1-0{a} libpmix2{a} libpng-dev{a} libpng16-16{a} libpoppler-dev{a} libpoppler-private-dev{a} libpoppler82{a} libpopt0{a} libpq-dev{a} libpq5{a} libprocps7{a} libproj-dev{a} libproj13{a} libpsl5{a} libpsm-infinipath1{a} libpthread-stubs0-dev{a} libpython-dev{a} libpython-stdlib{a} libpython2-dev{a} libpython2-stdlib{a} libpython2.7{a} libpython2.7-dev{a} libpython2.7-minimal{a} libpython2.7-stdlib{a} libqhull-dev{a} libqhull-r7{a} libqhull7{a} libqt5core5a{a} libqt5dbus5{a} libqt5gui5{a} libqt5network5{a} libqt5opengl5{a} libqt5positioning5{a} libqt5printsupport5{a} libqt5qml5{a} libqt5quick5{a} libqt5sensors5{a} libqt5webchannel5{a} libqt5webkit5{a} libqt5widgets5{a} librdmacm1{a} libreadline7{a} librhash0{a} librsvg2-2{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libshine3{a} libsigsegv2{a} libsm-dev{a} libsm6{a} libsnappy1v5{a} libsodium23{a} libsoxr0{a} libspatialite-dev{a} libspatialite7{a} libspeex1{a} libsqlite3-dev{a} libssh-gcrypt-4{a} libssh2-1{a} libssl1.1{a} libsuperlu-dev{a} libsuperlu5{a} libswresample-dev{a} libswresample3{a} libswscale-dev{a} libswscale5{a} libsz2{a} libtasn1-6-dev{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtheora-dev{a} libtheora0{a} libtiff-dev{a} libtiff5{a} libtiffxx5{a} libtk8.6{a} libtool{a} libtwolame0{a} libuchardet0{a} libunbound8{a} liburiparser-dev{a} liburiparser1{a} libuv1{a} libva-drm2{a} libva-x11-2{a} libva2{a} libvdpau1{a} libvorbis0a{a} libvorbisenc2{a} libvorbisfile3{a} libvpx5{a} libvtk6-dev{a} libvtk6-java{a} libvtk6-jni{a} libvtk6.3{a} libvtk6.3-qt{a} libwacom-common{a} libwacom2{a} libwavpack1{a} libwayland-client0{a} libwayland-server0{a} libwebp-dev{a} libwebp6{a} libwebpdemux2{a} libwebpmux3{a} libwoff1{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb-dev{a} libx11-xcb1{a} libx264-155{a} libx265-165{a} libxau-dev{a} libxau6{a} libxcb-dri2-0{a} libxcb-dri2-0-dev{a} libxcb-dri3-0{a} libxcb-dri3-dev{a} libxcb-glx0{a} libxcb-glx0-dev{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present-dev{a} libxcb-present0{a} libxcb-randr0{a} libxcb-randr0-dev{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-render0-dev{a} libxcb-shape0{a} libxcb-shape0-dev{a} libxcb-shm0{a} libxcb-sync-dev{a} libxcb-sync1{a} libxcb-util0{a} libxcb-xfixes0{a} libxcb-xfixes0-dev{a} libxcb-xinerama0{a} libxcb-xkb1{a} libxcb1{a} libxcb1-dev{a} libxdamage-dev{a} libxdamage1{a} libxdmcp-dev{a} libxdmcp6{a} libxerces-c-dev{a} libxerces-c3.2{a} libxext-dev{a} libxext6{a} libxfixes-dev{a} libxfixes3{a} libxft-dev{a} libxft2{a} libxi6{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxml2-dev{a} libxrender-dev{a} libxrender1{a} libxshmfence-dev{a} libxshmfence1{a} libxslt1.1{a} libxss-dev{a} libxss1{a} libxt-dev{a} libxt6{a} libxvidcore4{a} libxxf86vm-dev{a} libxxf86vm1{a} libzstd-dev{a} libzvbi-common{a} libzvbi0{a} lsb-base{a} m4{a} man-db{a} mariadb-common{a} mesa-common-dev{a} mime-support{a} mpi-default-bin{a} mpi-default-dev{a} mysql-common{a} nettle-dev{a} ocl-icd-libopencl1{a} odbcinst{a} odbcinst1debian2{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} pkg-config{a} po-debconf{a} procps{a} proj-data{a} python{a} python-asn1crypto{a} python-attr{a} python-autobahn{a} python-automat{a} python-cbor{a} python-cffi-backend{a} python-concurrent.futures{a} python-configparser{a} python-constantly{a} python-cryptography{a} python-enum34{a} python-future{a} python-hyperlink{a} python-incremental{a} python-ipaddress{a} python-lz4{a} python-minimal{a} python-mpi4py{a} python-nacl{a} python-openssl{a} python-pkg-resources{a} python-pyasn1{a} python-pyasn1-modules{a} python-pyqrcode{a} python-service-identity{a} python-six{a} python-snappy{a} python-trie{a} python-trollius{a} python-twisted{a} python-twisted-bin{a} python-twisted-core{a} python-txaio{a} python-u-msgpack{a} python-ubjson{a} python-vtk6{a} python-wsaccel{a} python-zope.interface{a} python2{a} python2-minimal{a} python2.7{a} python2.7-minimal{a} readline-common{a} sensible-utils{a} shared-mime-info{a} tcl{a} tcl-dev{a} tcl-vtk6{a} tcl8.6{a} tcl8.6-dev{a} tk{a} tk-dev{a} tk8.6{a} tk8.6-dev{a} ucf{a} unixodbc-dev{a} uuid-dev{a} vtk6{a} x11-common{a} x11proto-core-dev{a} x11proto-damage-dev{a} x11proto-dev{a} x11proto-fixes-dev{a} x11proto-scrnsaver-dev{a} x11proto-xext-dev{a} x11proto-xf86vidmode-dev{a} xkb-data{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl dbus deepin-terminal eterm geoclue-2.0 gnome-terminal gstreamer1.0-plugins-base i965-va-driver intel-media-va-driver javascript-common kitty konsole krb5-locales libaacs0 libarchive-cpio-perl libcoarrays-openmpi-dev libgdk-pixbuf2.0-bin libglib2.0-data libgpm2 libmail-sendmail-perl libpam-cap libpng-tools libqt5svg5 librsvg2-common libsasl2-modules libtasn1-doc libvdpau-va-gl1 libwacom-bin lilyterm lxterminal lynx mate-terminal mesa-va-drivers mesa-vdpau-drivers mlterm mlterm-tiny poppler-data proj-bin psmisc pterm publicsuffix python-click python-dev python-idna python-png qt5-gtk-platformtheme qterminal qttranslations5-l10n rxvt-unicode sakura stterm terminator terminology termit tilix va-driver-all vdpau-driver-all vdpau-va-driver wget xauth xdg-user-dirs xfce4-terminal xiterm+thai xterm 0 packages upgraded, 521 newly installed, 0 to remove and 0 not upgraded. Need to get 316 MB of archives. After unpacking 1440 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main i386 libbsd0 i386 0.9.1-2 [104 kB] Get: 2 http://deb.debian.org/debian buster/main i386 bsdmainutils i386 11.1.2+b1 [193 kB] Get: 3 http://deb.debian.org/debian buster/main i386 libuchardet0 i386 0.0.6-3 [65.2 kB] Get: 4 http://deb.debian.org/debian buster/main i386 groff-base i386 1.22.4-3 [935 kB] Get: 5 http://deb.debian.org/debian buster/main i386 libpipeline1 i386 1.5.1-2 [33.3 kB] Get: 6 http://deb.debian.org/debian buster/main i386 man-db i386 2.8.5-2 [1284 kB] Get: 7 http://deb.debian.org/debian buster/main i386 libpython2.7-minimal i386 2.7.16-2+deb10u1 [395 kB] Get: 8 http://deb.debian.org/debian buster/main i386 python2.7-minimal i386 2.7.16-2+deb10u1 [1381 kB] Get: 9 http://deb.debian.org/debian buster/main i386 python2-minimal i386 2.7.16-1 [41.4 kB] Get: 10 http://deb.debian.org/debian buster/main i386 python-minimal i386 2.7.16-1 [21.0 kB] Get: 11 http://deb.debian.org/debian buster/main i386 libssl1.1 i386 1.1.1d-0+deb10u3 [1537 kB] Get: 12 http://deb.debian.org/debian buster/main i386 mime-support all 3.62 [37.2 kB] Get: 13 http://deb.debian.org/debian buster/main i386 libexpat1 i386 2.2.6-2+deb10u1 [104 kB] Get: 14 http://deb.debian.org/debian buster/main i386 readline-common all 7.0-5 [70.6 kB] Get: 15 http://deb.debian.org/debian buster/main i386 libreadline7 i386 7.0-5 [156 kB] Get: 16 http://deb.debian.org/debian buster/main i386 libpython2.7-stdlib i386 2.7.16-2+deb10u1 [1934 kB] Get: 17 http://deb.debian.org/debian buster/main i386 python2.7 i386 2.7.16-2+deb10u1 [305 kB] Get: 18 http://deb.debian.org/debian buster/main i386 libpython2-stdlib i386 2.7.16-1 [20.8 kB] Get: 19 http://deb.debian.org/debian buster/main i386 libpython-stdlib i386 2.7.16-1 [20.8 kB] Get: 20 http://deb.debian.org/debian buster/main i386 python2 i386 2.7.16-1 [41.6 kB] Get: 21 http://deb.debian.org/debian buster/main i386 python i386 2.7.16-1 [22.8 kB] Get: 22 http://deb.debian.org/debian buster/main i386 libglib2.0-0 i386 2.58.3-2+deb10u2 [1334 kB] Get: 23 http://deb.debian.org/debian buster/main i386 libcap2 i386 1:2.25-2 [18.0 kB] Get: 24 http://deb.debian.org/debian buster/main i386 libcap2-bin i386 1:2.25-2 [28.9 kB] Get: 25 http://deb.debian.org/debian buster/main i386 libgstreamer1.0-0 i386 1.14.4-1 [2133 kB] Get: 26 http://deb.debian.org/debian buster/main i386 liborc-0.4-0 i386 1:0.4.28-3.1 [152 kB] Get: 27 http://deb.debian.org/debian buster/main i386 iso-codes all 4.2-1 [2713 kB] Get: 28 http://deb.debian.org/debian buster/main i386 libgstreamer-plugins-base1.0-0 i386 1.14.4-2 [1956 kB] Get: 29 http://deb.debian.org/debian buster/main i386 libhyphen0 i386 2.8.8-7 [32.3 kB] Get: 30 http://deb.debian.org/debian buster/main i386 libicu63 i386 63.1-6+deb10u1 [8451 kB] Get: 31 http://deb.debian.org/debian buster/main i386 libjpeg62-turbo i386 1:1.5.2-2+b1 [142 kB] Get: 32 http://deb.debian.org/debian buster/main i386 libpng16-16 i386 1.6.36-6 [301 kB] Get: 33 http://deb.debian.org/debian buster/main i386 libdouble-conversion1 i386 3.1.0-3 [43.3 kB] Get: 34 http://deb.debian.org/debian buster/main i386 libpcre2-16-0 i386 10.32-5 [203 kB] Get: 35 http://deb.debian.org/debian buster/main i386 libqt5core5a i386 5.11.3+dfsg1-1+deb10u3 [2510 kB] Get: 36 http://deb.debian.org/debian buster/main i386 libfreetype6 i386 2.9.1-3+deb10u1 [395 kB] Get: 37 http://deb.debian.org/debian buster/main i386 sensible-utils all 0.0.12 [15.8 kB] Get: 38 http://deb.debian.org/debian buster/main i386 ucf all 3.0038+nmu1 [69.0 kB] Get: 39 http://deb.debian.org/debian buster/main i386 fonts-dejavu-core all 2.37-1 [1068 kB] Get: 40 http://deb.debian.org/debian buster/main i386 fontconfig-config all 2.13.1-2 [280 kB] Get: 41 http://deb.debian.org/debian buster/main i386 libfontconfig1 i386 2.13.1-2 [357 kB] Get: 42 http://deb.debian.org/debian buster/main i386 fontconfig i386 2.13.1-2 [405 kB] Get: 43 http://deb.debian.org/debian buster/main i386 libdrm-common all 2.4.97-1 [13.8 kB] Get: 44 http://deb.debian.org/debian buster/main i386 libdrm2 i386 2.4.97-1 [42.5 kB] Get: 45 http://deb.debian.org/debian buster/main i386 libglvnd0 i386 1.1.0-1 [41.9 kB] Get: 46 http://deb.debian.org/debian buster/main i386 libwayland-server0 i386 1.16.0-1 [33.7 kB] Get: 47 http://deb.debian.org/debian buster/main i386 libgbm1 i386 18.3.6-2+deb10u1 [69.5 kB] Get: 48 http://deb.debian.org/debian buster/main i386 libglapi-mesa i386 18.3.6-2+deb10u1 [66.9 kB] Get: 49 http://deb.debian.org/debian buster/main i386 libwayland-client0 i386 1.16.0-1 [27.0 kB] Get: 50 http://deb.debian.org/debian buster/main i386 libx11-xcb1 i386 2:1.6.7-1 [190 kB] Get: 51 http://deb.debian.org/debian buster/main i386 libxau6 i386 1:1.0.8-1+b2 [20.3 kB] Get: 52 http://deb.debian.org/debian buster/main i386 libxdmcp6 i386 1:1.1.2-3 [26.7 kB] Get: 53 http://deb.debian.org/debian buster/main i386 libxcb1 i386 1.13.1-2 [141 kB] Get: 54 http://deb.debian.org/debian buster/main i386 libxcb-dri2-0 i386 1.13.1-2 [101 kB] Get: 55 http://deb.debian.org/debian buster/main i386 libxcb-dri3-0 i386 1.13.1-2 [101 kB] Get: 56 http://deb.debian.org/debian buster/main i386 libxcb-present0 i386 1.13.1-2 [99.4 kB] Get: 57 http://deb.debian.org/debian buster/main i386 libxcb-sync1 i386 1.13.1-2 [103 kB] Get: 58 http://deb.debian.org/debian buster/main i386 libxcb-xfixes0 i386 1.13.1-2 [103 kB] Get: 59 http://deb.debian.org/debian buster/main i386 libxshmfence1 i386 1.3-1 [8976 B] Get: 60 http://deb.debian.org/debian buster/main i386 libegl-mesa0 i386 18.3.6-2+deb10u1 [143 kB] Get: 61 http://deb.debian.org/debian buster/main i386 libegl1 i386 1.1.0-1 [35.3 kB] Get: 62 http://deb.debian.org/debian buster/main i386 libx11-data all 2:1.6.7-1 [298 kB] Get: 63 http://deb.debian.org/debian buster/main i386 libx11-6 i386 2:1.6.7-1 [778 kB] Get: 64 http://deb.debian.org/debian buster/main i386 libxext6 i386 2:1.3.3-1+b2 [55.2 kB] Get: 65 http://deb.debian.org/debian buster/main i386 libxcb-glx0 i386 1.13.1-2 [117 kB] Get: 66 http://deb.debian.org/debian buster/main i386 libxfixes3 i386 1:5.0.3-1 [22.4 kB] Get: 67 http://deb.debian.org/debian buster/main i386 libxdamage1 i386 1:1.1.4-3+b3 [15.0 kB] Get: 68 http://deb.debian.org/debian buster/main i386 libxxf86vm1 i386 1:1.1.4-1+b2 [21.7 kB] Get: 69 http://deb.debian.org/debian buster/main i386 libdrm-amdgpu1 i386 2.4.97-1 [30.1 kB] Get: 70 http://deb.debian.org/debian buster/main i386 libpciaccess0 i386 0.14-1 [55.7 kB] Get: 71 http://deb.debian.org/debian buster/main i386 libdrm-intel1 i386 2.4.97-1 [72.9 kB] Get: 72 http://deb.debian.org/debian buster/main i386 libdrm-nouveau2 i386 2.4.97-1 [28.0 kB] Get: 73 http://deb.debian.org/debian buster/main i386 libdrm-radeon1 i386 2.4.97-1 [32.5 kB] Get: 74 http://deb.debian.org/debian buster/main i386 libelf1 i386 0.176-1.1 [166 kB] Get: 75 http://deb.debian.org/debian buster/main i386 libedit2 i386 3.1-20181209-1 [98.2 kB] Get: 76 http://deb.debian.org/debian buster/main i386 libllvm7 i386 1:7.0.1-8 [13.0 MB] Get: 77 http://deb.debian.org/debian buster/main i386 libsensors-config all 1:3.5.0-3 [31.6 kB] Get: 78 http://deb.debian.org/debian buster/main i386 libsensors5 i386 1:3.5.0-3 [53.5 kB] Get: 79 http://deb.debian.org/debian buster/main i386 libgl1-mesa-dri i386 18.3.6-2+deb10u1 [7102 kB] Get: 80 http://deb.debian.org/debian buster/main i386 libglx-mesa0 i386 18.3.6-2+deb10u1 [187 kB] Get: 81 http://deb.debian.org/debian buster/main i386 libglx0 i386 1.1.0-1 [31.3 kB] Get: 82 http://deb.debian.org/debian buster/main i386 libgl1 i386 1.1.0-1 [83.1 kB] Get: 83 http://deb.debian.org/debian buster/main i386 libgraphite2-3 i386 1.3.13-7 [84.0 kB] Get: 84 http://deb.debian.org/debian buster/main i386 libharfbuzz0b i386 2.3.1-1 [1209 kB] Get: 85 http://deb.debian.org/debian buster/main i386 lsb-base all 10.2019051400 [28.4 kB] Get: 86 http://deb.debian.org/debian buster/main i386 x11-common all 1:7.7+19 [251 kB] Get: 87 http://deb.debian.org/debian buster/main i386 libice6 i386 2:1.0.9-2 [61.1 kB] Get: 88 http://deb.debian.org/debian buster/main i386 libevdev2 i386 1.6.0+dfsg-1 [29.8 kB] Get: 89 http://deb.debian.org/debian buster/main i386 libmtdev1 i386 1.1.5-1+b1 [22.9 kB] Get: 90 http://deb.debian.org/debian buster/main i386 libgudev-1.0-0 i386 232-2 [14.2 kB] Get: 91 http://deb.debian.org/debian buster/main i386 libwacom-common all 0.32-1 [39.1 kB] Get: 92 http://deb.debian.org/debian buster/main i386 libwacom2 i386 0.32-1 [20.0 kB] Get: 93 http://deb.debian.org/debian buster/main i386 libinput-bin i386 1.12.6-2 [16.9 kB] Get: 94 http://deb.debian.org/debian buster/main i386 libinput10 i386 1.12.6-2 [118 kB] Get: 95 http://deb.debian.org/debian buster/main i386 libdbus-1-3 i386 1.12.16-1 [226 kB] Get: 96 http://deb.debian.org/debian buster/main i386 libqt5dbus5 i386 5.11.3+dfsg1-1+deb10u3 [258 kB] Get: 97 http://deb.debian.org/debian buster/main i386 libqt5network5 i386 5.11.3+dfsg1-1+deb10u3 [763 kB] Get: 98 http://deb.debian.org/debian buster/main i386 libsm6 i386 2:1.2.3-1 [35.7 kB] Get: 99 http://deb.debian.org/debian buster/main i386 libxcb-icccm4 i386 0.4.1-1.1 [28.1 kB] Get: 100 http://deb.debian.org/debian buster/main i386 libxcb-shm0 i386 1.13.1-2 [99.4 kB] Get: 101 http://deb.debian.org/debian buster/main i386 libxcb-util0 i386 0.3.8-3+b2 [23.3 kB] Get: 102 http://deb.debian.org/debian buster/main i386 libxcb-image0 i386 0.4.0-1+b2 [24.8 kB] Get: 103 http://deb.debian.org/debian buster/main i386 libxcb-keysyms1 i386 0.4.0-1+b2 [16.7 kB] Get: 104 http://deb.debian.org/debian buster/main i386 libxcb-randr0 i386 1.13.1-2 [112 kB] Get: 105 http://deb.debian.org/debian buster/main i386 libxcb-render0 i386 1.13.1-2 [110 kB] Get: 106 http://deb.debian.org/debian buster/main i386 libxcb-render-util0 i386 0.3.9-1+b1 [18.7 kB] Get: 107 http://deb.debian.org/debian buster/main i386 libxcb-shape0 i386 1.13.1-2 [99.7 kB] Get: 108 http://deb.debian.org/debian buster/main i386 libxcb-xinerama0 i386 1.13.1-2 [99.0 kB] Get: 109 http://deb.debian.org/debian buster/main i386 libxcb-xkb1 i386 1.13.1-2 [126 kB] Get: 110 http://deb.debian.org/debian buster/main i386 libxi6 i386 2:1.7.9-1 [85.2 kB] Get: 111 http://deb.debian.org/debian buster/main i386 xkb-data all 2.26-2 [681 kB] Get: 112 http://deb.debian.org/debian buster/main i386 libxkbcommon0 i386 0.8.2-1 [128 kB] Get: 113 http://deb.debian.org/debian buster/main i386 libxkbcommon-x11-0 i386 0.8.2-1 [40.5 kB] Get: 114 http://deb.debian.org/debian buster/main i386 libxrender1 i386 1:0.9.10-1 [34.1 kB] Get: 115 http://deb.debian.org/debian buster/main i386 libqt5gui5 i386 5.11.3+dfsg1-1+deb10u3 [4844 kB] Get: 116 http://deb.debian.org/debian buster/main i386 libqt5positioning5 i386 5.11.3+dfsg-2 [214 kB] Get: 117 http://deb.debian.org/debian buster/main i386 libavahi-common-data i386 0.7-4+b1 [122 kB] Get: 118 http://deb.debian.org/debian buster/main i386 libavahi-common3 i386 0.7-4+b1 [56.2 kB] Get: 119 http://deb.debian.org/debian buster/main i386 libavahi-client3 i386 0.7-4+b1 [60.1 kB] Get: 120 http://deb.debian.org/debian buster/main i386 libkeyutils1 i386 1.6-6 [15.4 kB] Get: 121 http://deb.debian.org/debian buster/main i386 libkrb5support0 i386 1.17-3 [68.6 kB] Get: 122 http://deb.debian.org/debian buster/main i386 libk5crypto3 i386 1.17-3 [126 kB] Get: 123 http://deb.debian.org/debian buster/main i386 libkrb5-3 i386 1.17-3 [396 kB] Get: 124 http://deb.debian.org/debian buster/main i386 libgssapi-krb5-2 i386 1.17-3 [168 kB] Get: 125 http://deb.debian.org/debian buster/main i386 libcups2 i386 2.2.10-6+deb10u3 [338 kB] Get: 126 http://deb.debian.org/debian buster/main i386 libqt5widgets5 i386 5.11.3+dfsg1-1+deb10u3 [2537 kB] Get: 127 http://deb.debian.org/debian buster/main i386 libqt5printsupport5 i386 5.11.3+dfsg1-1+deb10u3 [234 kB] Get: 128 http://deb.debian.org/debian buster/main i386 libqt5qml5 i386 5.11.3-4 [1371 kB] Get: 129 http://deb.debian.org/debian buster/main i386 libqt5quick5 i386 5.11.3-4 [1414 kB] Get: 130 http://deb.debian.org/debian buster/main i386 libqt5sensors5 i386 5.11.3-2 [124 kB] Get: 131 http://deb.debian.org/debian buster/main i386 libqt5webchannel5 i386 5.11.3-2 [53.7 kB] Get: 132 http://deb.debian.org/debian buster/main i386 libwebp6 i386 0.6.1-2 [275 kB] Get: 133 http://deb.debian.org/debian buster/main i386 libbrotli1 i386 1.0.7-2 [267 kB] Get: 134 http://deb.debian.org/debian buster/main i386 libwoff1 i386 1.0.2-1 [46.0 kB] Get: 135 http://deb.debian.org/debian buster/main i386 libxml2 i386 2.9.4+dfsg1-7+b3 [721 kB] Get: 136 http://deb.debian.org/debian buster/main i386 libxslt1.1 i386 1.1.32-2.2~deb10u1 [248 kB] Get: 137 http://deb.debian.org/debian buster/main i386 libqt5webkit5 i386 5.212.0~alpha2-21 [12.2 MB] Get: 138 http://deb.debian.org/debian buster/main i386 libncurses6 i386 6.1+20181013-2+deb10u2 [109 kB] Get: 139 http://deb.debian.org/debian buster/main i386 libprocps7 i386 2:3.3.15-2 [62.7 kB] Get: 140 http://deb.debian.org/debian buster/main i386 procps i386 2:3.3.15-2 [259 kB] Get: 141 http://deb.debian.org/debian buster/main i386 libmagic-mgc i386 1:5.35-4+deb10u1 [242 kB] Get: 142 http://deb.debian.org/debian buster/main i386 libmagic1 i386 1:5.35-4+deb10u1 [124 kB] Get: 143 http://deb.debian.org/debian buster/main i386 file i386 1:5.35-4+deb10u1 [66.3 kB] Get: 144 http://deb.debian.org/debian buster/main i386 gettext-base i386 0.19.8.1-9 [124 kB] Get: 145 http://deb.debian.org/debian buster/main i386 openssh-client i386 1:7.9p1-10+deb10u2 [834 kB] Get: 146 http://deb.debian.org/debian buster/main i386 libsigsegv2 i386 2.12-2 [33.2 kB] Get: 147 http://deb.debian.org/debian buster/main i386 m4 i386 1.4.18-2 [205 kB] Get: 148 http://deb.debian.org/debian buster/main i386 autoconf all 2.69-11 [341 kB] Get: 149 http://deb.debian.org/debian buster/main i386 autotools-dev all 20180224.1 [77.0 kB] Get: 150 http://deb.debian.org/debian buster/main i386 automake all 1:1.16.1-4 [771 kB] Get: 151 http://deb.debian.org/debian buster/main i386 autopoint all 0.19.8.1-9 [434 kB] Get: 152 http://deb.debian.org/debian buster/main i386 cmake-data all 3.13.4-1 [1476 kB] Get: 153 http://deb.debian.org/debian buster/main i386 libarchive13 i386 3.3.3-4+deb10u1 [351 kB] Get: 154 http://deb.debian.org/debian buster/main i386 libsasl2-modules-db i386 2.1.27+dfsg-1+deb10u1 [70.1 kB] Get: 155 http://deb.debian.org/debian buster/main i386 libsasl2-2 i386 2.1.27+dfsg-1+deb10u1 [110 kB] Get: 156 http://deb.debian.org/debian buster/main i386 libldap-common all 2.4.47+dfsg-3+deb10u2 [89.7 kB] Get: 157 http://deb.debian.org/debian buster/main i386 libldap-2.4-2 i386 2.4.47+dfsg-3+deb10u2 [236 kB] Get: 158 http://deb.debian.org/debian buster/main i386 libnghttp2-14 i386 1.36.0-2+deb10u1 [90.3 kB] Get: 159 http://deb.debian.org/debian buster/main i386 libpsl5 i386 0.20.2-2 [54.4 kB] Get: 160 http://deb.debian.org/debian buster/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2 [64.2 kB] Get: 161 http://deb.debian.org/debian buster/main i386 libssh2-1 i386 1.8.0-2.1 [147 kB] Get: 162 http://deb.debian.org/debian buster/main i386 libcurl4 i386 7.64.0-4+deb10u1 [358 kB] Get: 163 http://deb.debian.org/debian buster/main i386 libjsoncpp1 i386 1.7.4-3 [85.0 kB] Get: 164 http://deb.debian.org/debian buster/main i386 librhash0 i386 1.3.8-1 [135 kB] Get: 165 http://deb.debian.org/debian buster/main i386 libuv1 i386 1.24.1-1 [116 kB] Get: 166 http://deb.debian.org/debian buster/main i386 cmake i386 3.13.4-1 [3747 kB] Get: 167 http://deb.debian.org/debian buster/main i386 cython i386 0.29.2-2 [1275 kB] Get: 168 http://deb.debian.org/debian buster/main i386 libtool all 2.4.6-9 [547 kB] Get: 169 http://deb.debian.org/debian buster/main i386 dh-autoreconf all 19 [16.9 kB] Get: 170 http://deb.debian.org/debian buster/main i386 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 171 http://deb.debian.org/debian buster/main i386 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 172 http://deb.debian.org/debian buster/main i386 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 173 http://deb.debian.org/debian buster/main i386 dwz i386 0.12-3 [81.4 kB] Get: 174 http://deb.debian.org/debian buster/main i386 libcroco3 i386 0.6.12-3 [151 kB] Get: 175 http://deb.debian.org/debian buster/main i386 gettext i386 0.19.8.1-9 [1314 kB] Get: 176 http://deb.debian.org/debian buster/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 177 http://deb.debian.org/debian buster/main i386 po-debconf all 1.0.21 [248 kB] Get: 178 http://deb.debian.org/debian buster/main i386 debhelper all 12.1.1 [1016 kB] Get: 179 http://deb.debian.org/debian buster/main i386 mysql-common all 5.8+1.0.5 [7324 B] Get: 180 http://deb.debian.org/debian buster/main i386 mariadb-common all 1:10.3.22-0+deb10u1 [31.9 kB] Get: 181 http://deb.debian.org/debian buster/main i386 libmariadb3 i386 1:10.3.22-0+deb10u1 [169 kB] Get: 182 http://deb.debian.org/debian buster/main i386 libevent-2.1-6 i386 2.1.8-stable-4 [191 kB] Get: 183 http://deb.debian.org/debian buster/main i386 libunbound8 i386 1.9.0-2+deb10u1 [492 kB] Get: 184 http://deb.debian.org/debian buster/main i386 libgnutls-dane0 i386 3.6.7-4+deb10u3 [317 kB] Get: 185 http://deb.debian.org/debian buster/main i386 libgnutls-openssl27 i386 3.6.7-4+deb10u3 [317 kB] Get: 186 http://deb.debian.org/debian buster/main i386 libgnutlsxx28 i386 3.6.7-4+deb10u3 [15.6 kB] Get: 187 http://deb.debian.org/debian buster/main i386 libidn2-dev i386 2.0.5-1+deb10u1 [80.4 kB] Get: 188 http://deb.debian.org/debian buster/main i386 libp11-kit-dev i386 0.23.15-2 [195 kB] Get: 189 http://deb.debian.org/debian buster/main i386 libtasn1-6-dev i386 4.13-3 [107 kB] Get: 190 http://deb.debian.org/debian buster/main i386 libgmpxx4ldbl i386 2:6.1.2+dfsg-4 [23.2 kB] Get: 191 http://deb.debian.org/debian buster/main i386 libgmp-dev i386 2:6.1.2+dfsg-4 [648 kB] Get: 192 http://deb.debian.org/debian buster/main i386 nettle-dev i386 3.4.1-1 [1101 kB] Get: 193 http://deb.debian.org/debian buster/main i386 libgnutls28-dev i386 3.6.7-4+deb10u3 [1148 kB] Get: 194 http://deb.debian.org/debian buster/main i386 zlib1g-dev i386 1:1.2.11.dfsg-1 [216 kB] Get: 195 http://deb.debian.org/debian buster/main i386 libmariadb-dev i386 1:10.3.22-0+deb10u1 [1011 kB] Get: 196 http://deb.debian.org/debian buster/main i386 libmariadb-dev-compat i386 1:10.3.22-0+deb10u1 [31.0 kB] Get: 197 http://deb.debian.org/debian buster/main i386 default-libmysqlclient-dev i386 1.0.5 [3764 B] Get: 198 http://deb.debian.org/debian buster/main i386 gdal-data all 2.4.0+dfsg-1 [744 kB] Get: 199 http://deb.debian.org/debian buster/main i386 hdf5-helpers i386 1.10.4+repack-10 [35.2 kB] Get: 200 http://deb.debian.org/debian buster/main i386 libnl-3-200 i386 3.4.0-1 [65.8 kB] Get: 201 http://deb.debian.org/debian buster/main i386 libnl-route-3-200 i386 3.4.0-1 [170 kB] Get: 202 http://deb.debian.org/debian buster/main i386 libibverbs1 i386 22.1-1 [53.9 kB] Get: 203 http://deb.debian.org/debian buster/main i386 ibverbs-providers i386 22.1-1 [201 kB] Get: 204 http://deb.debian.org/debian buster/main i386 icu-devtools i386 63.1-6+deb10u1 [196 kB] Get: 205 http://deb.debian.org/debian buster/main i386 libaec0 i386 1.0.2-1 [22.6 kB] Get: 206 http://deb.debian.org/debian buster/main i386 libsz2 i386 1.0.2-1 [6720 B] Get: 207 http://deb.debian.org/debian buster/main i386 libaec-dev i386 1.0.2-1 [21.4 kB] Get: 208 http://deb.debian.org/debian buster/main i386 libaom0 i386 1.0.0-3 [855 kB] Get: 209 http://deb.debian.org/debian buster/main i386 libgfortran5 i386 8.3.0-6 [549 kB] Get: 210 http://deb.debian.org/debian buster/main i386 libblas3 i386 3.8.0-2 [142 kB] Get: 211 http://deb.debian.org/debian buster/main i386 liblapack3 i386 3.8.0-2 [1974 kB] Get: 212 http://deb.debian.org/debian buster/main i386 libarpack2 i386 3.7.0-2 [103 kB] Get: 213 http://deb.debian.org/debian buster/main i386 libsuperlu5 i386 5.2.1+dfsg1-4 [160 kB] Get: 214 http://deb.debian.org/debian buster/main i386 libarmadillo9 i386 1:9.200.7+dfsg-1 [90.5 kB] Get: 215 http://deb.debian.org/debian buster/main i386 libblas-dev i386 3.8.0-2 [150 kB] Get: 216 http://deb.debian.org/debian buster/main i386 liblapack-dev i386 3.8.0-2 [2035 kB] Get: 217 http://deb.debian.org/debian buster/main i386 libarpack2-dev i386 3.7.0-2 [117 kB] Get: 218 http://deb.debian.org/debian buster/main i386 libhdf5-103 i386 1.10.4+repack-10 [1310 kB] Get: 219 http://deb.debian.org/debian buster/main i386 libjpeg62-turbo-dev i386 1:1.5.2-2+b1 [226 kB] Get: 220 http://deb.debian.org/debian buster/main i386 libjpeg-dev all 1:1.5.2-2 [57.5 kB] Get: 221 http://deb.debian.org/debian buster/main i386 libhdf5-cpp-103 i386 1.10.4+repack-10 [155 kB] Get: 222 http://deb.debian.org/debian buster/main i386 libhdf5-dev i386 1.10.4+repack-10 [2738 kB] Get: 223 http://deb.debian.org/debian buster/main i386 libsuperlu-dev i386 5.2.1+dfsg1-4 [18.4 kB] Get: 224 http://deb.debian.org/debian buster/main i386 libarmadillo-dev i386 1:9.200.7+dfsg-1 [360 kB] Get: 225 http://deb.debian.org/debian buster/main i386 libva2 i386 2.4.0-1 [60.6 kB] Get: 226 http://deb.debian.org/debian buster/main i386 libva-drm2 i386 2.4.0-1 [16.8 kB] Get: 227 http://deb.debian.org/debian buster/main i386 libva-x11-2 i386 2.4.0-1 [21.9 kB] Get: 228 http://deb.debian.org/debian buster/main i386 libvdpau1 i386 1.1.1-10 [40.8 kB] Get: 229 http://deb.debian.org/debian buster/main i386 libavutil56 i386 7:4.1.4-1~deb10u1 [244 kB] Get: 230 http://deb.debian.org/debian buster/main i386 libpixman-1-0 i386 0.36.0-1 [541 kB] Get: 231 http://deb.debian.org/debian buster/main i386 libcairo2 i386 1.16.0-4 [744 kB] Get: 232 http://deb.debian.org/debian buster/main i386 libcodec2-0.8.1 i386 0.8.1-2 [233 kB] Get: 233 http://deb.debian.org/debian buster/main i386 libcrystalhd3 i386 1:0.0~git20110715.fdd2f19-13 [50.2 kB] Get: 234 http://deb.debian.org/debian buster/main i386 libgsm1 i386 1.0.18-2 [29.5 kB] Get: 235 http://deb.debian.org/debian buster/main i386 libmp3lame0 i386 3.100-2+b1 [366 kB] Get: 236 http://deb.debian.org/debian buster/main i386 libopenjp2-7 i386 2.3.0-2+deb10u1 [164 kB] Get: 237 http://deb.debian.org/debian buster/main i386 libopus0 i386 1.3-1 [191 kB] Get: 238 http://deb.debian.org/debian buster/main i386 libjbig0 i386 2.1-3.1+b2 [31.5 kB] Get: 239 http://deb.debian.org/debian buster/main i386 libtiff5 i386 4.1.0+git191117-2~deb10u1 [284 kB] Get: 240 http://deb.debian.org/debian buster/main i386 shared-mime-info i386 1.10-1 [766 kB] Get: 241 http://deb.debian.org/debian buster/main i386 libgdk-pixbuf2.0-common all 2.38.1+dfsg-1 [316 kB] Get: 242 http://deb.debian.org/debian buster/main i386 libgdk-pixbuf2.0-0 i386 2.38.1+dfsg-1 [187 kB] Get: 243 http://deb.debian.org/debian buster/main i386 libfribidi0 i386 1.0.5-3.1+deb10u1 [64.3 kB] Get: 244 http://deb.debian.org/debian buster/main i386 libthai-data all 0.1.28-2 [170 kB] Get: 245 http://deb.debian.org/debian buster/main i386 libdatrie1 i386 0.2.12-2 [40.7 kB] Get: 246 http://deb.debian.org/debian buster/main i386 libthai0 i386 0.1.28-2 [55.2 kB] Get: 247 http://deb.debian.org/debian buster/main i386 libpango-1.0-0 i386 1.42.4-8~deb10u1 [192 kB] Get: 248 http://deb.debian.org/debian buster/main i386 libpangoft2-1.0-0 i386 1.42.4-8~deb10u1 [71.3 kB] Get: 249 http://deb.debian.org/debian buster/main i386 libpangocairo-1.0-0 i386 1.42.4-8~deb10u1 [57.5 kB] Get: 250 http://deb.debian.org/debian buster/main i386 librsvg2-2 i386 2.44.10-2.1 [1357 kB] Get: 251 http://deb.debian.org/debian buster/main i386 libshine3 i386 3.1.1-2 [22.9 kB] Get: 252 http://deb.debian.org/debian buster/main i386 libsnappy1v5 i386 1.1.7-1 [18.0 kB] Get: 253 http://deb.debian.org/debian buster/main i386 libspeex1 i386 1.2~rc1.2-1+b2 [99.2 kB] Get: 254 http://deb.debian.org/debian buster/main i386 libsoxr0 i386 0.1.2-3 [69.1 kB] Get: 255 http://deb.debian.org/debian buster/main i386 libswresample3 i386 7:4.1.4-1~deb10u1 [101 kB] Get: 256 http://deb.debian.org/debian buster/main i386 libogg0 i386 1.3.2-1+b1 [19.4 kB] Get: 257 http://deb.debian.org/debian buster/main i386 libtheora0 i386 1.1.1+dfsg.1-15 [166 kB] Get: 258 http://deb.debian.org/debian buster/main i386 libtwolame0 i386 0.3.13-4 [48.8 kB] Get: 259 http://deb.debian.org/debian buster/main i386 libvorbis0a i386 1.3.6-2 [93.3 kB] Get: 260 http://deb.debian.org/debian buster/main i386 libvorbisenc2 i386 1.3.6-2 [74.0 kB] Get: 261 http://deb.debian.org/debian buster/main i386 libvpx5 i386 1.7.0-3+deb10u1 [746 kB] Get: 262 http://deb.debian.org/debian buster/main i386 libwavpack1 i386 5.1.0-6 [91.6 kB] Get: 263 http://deb.debian.org/debian buster/main i386 libwebpmux3 i386 0.6.1-2 [99.1 kB] Get: 264 http://deb.debian.org/debian buster/main i386 libx264-155 i386 2:0.155.2917+git0a84d98-2 [917 kB] Get: 265 http://deb.debian.org/debian buster/main i386 libnuma1 i386 2.0.12-1 [27.7 kB] Get: 266 http://deb.debian.org/debian buster/main i386 libx265-165 i386 2.9-4 [617 kB] Get: 267 http://deb.debian.org/debian buster/main i386 libxvidcore4 i386 2:1.3.5-1 [239 kB] Get: 268 http://deb.debian.org/debian buster/main i386 libzvbi-common all 0.2.35-16 [64.3 kB] Get: 269 http://deb.debian.org/debian buster/main i386 libzvbi0 i386 0.2.35-16 [274 kB] Get: 270 http://deb.debian.org/debian buster/main i386 libavcodec58 i386 7:4.1.4-1~deb10u1 [4754 kB] Get: 271 http://deb.debian.org/debian buster/main i386 libavutil-dev i386 7:4.1.4-1~deb10u1 [367 kB] Get: 272 http://deb.debian.org/debian buster/main i386 libswresample-dev i386 7:4.1.4-1~deb10u1 [115 kB] Get: 273 http://deb.debian.org/debian buster/main i386 libavcodec-dev i386 7:4.1.4-1~deb10u1 [5346 kB] Get: 274 http://deb.debian.org/debian buster/main i386 libbluray2 i386 1:1.1.0-1 [159 kB] Get: 275 http://deb.debian.org/debian buster/main i386 libchromaprint1 i386 1.4.3-3 [44.7 kB] Get: 276 http://deb.debian.org/debian buster/main i386 libgme0 i386 0.6.2-1 [126 kB] Get: 277 http://deb.debian.org/debian buster/main i386 libmpg123-0 i386 1.25.10-2 [144 kB] Get: 278 http://deb.debian.org/debian buster/main i386 libvorbisfile3 i386 1.3.6-2 [28.0 kB] Get: 279 http://deb.debian.org/debian buster/main i386 libopenmpt0 i386 0.4.3-1 [675 kB] Get: 280 http://deb.debian.org/debian buster/main i386 libssh-gcrypt-4 i386 0.8.7-1+deb10u1 [219 kB] Get: 281 http://deb.debian.org/debian buster/main i386 libavformat58 i386 7:4.1.4-1~deb10u1 [1135 kB] Get: 282 http://deb.debian.org/debian buster/main i386 libavformat-dev i386 7:4.1.4-1~deb10u1 [1364 kB] Get: 283 http://deb.debian.org/debian buster/main i386 libboost1.67-dev i386 1.67.0-13+deb10u1 [8388 kB] Get: 284 http://deb.debian.org/debian buster/main i386 libboost-dev i386 1.67.0.1 [3864 B] Get: 285 http://deb.debian.org/debian buster/main i386 libboost-serialization1.67.0 i386 1.67.0-13+deb10u1 [325 kB] Get: 286 http://deb.debian.org/debian buster/main i386 libboost-serialization1.67-dev i386 1.67.0-13+deb10u1 [367 kB] Get: 287 http://deb.debian.org/debian buster/main i386 libevent-core-2.1-6 i386 2.1.8-stable-4 [137 kB] Get: 288 http://deb.debian.org/debian buster/main i386 libevent-pthreads-2.1-6 i386 2.1.8-stable-4 [48.1 kB] Get: 289 http://deb.debian.org/debian buster/main i386 libpsm-infinipath1 i386 3.3+20.604758e7-6 [178 kB] Get: 290 http://deb.debian.org/debian buster/main i386 librdmacm1 i386 22.1-1 [68.8 kB] Get: 291 http://deb.debian.org/debian buster/main i386 libfabric1 i386 1.6.2-3 [364 kB] Get: 292 http://deb.debian.org/debian buster/main i386 libltdl7 i386 2.4.6-9 [392 kB] Get: 293 http://deb.debian.org/debian buster/main i386 libhwloc5 i386 1.11.12-3 [119 kB] Get: 294 http://deb.debian.org/debian buster/main i386 ocl-icd-libopencl1 i386 2.2.12-2 [37.2 kB] Get: 295 http://deb.debian.org/debian buster/main i386 libhwloc-plugins i386 1.11.12-3 [17.8 kB] Get: 296 http://deb.debian.org/debian buster/main i386 libpmix2 i386 3.1.2-3 [541 kB] Get: 297 http://deb.debian.org/debian buster/main i386 libopenmpi3 i386 3.1.3-11 [2236 kB] Get: 298 http://deb.debian.org/debian buster/main i386 libboost-mpi1.67.0 i386 1.67.0-13+deb10u1 [274 kB] Get: 299 http://deb.debian.org/debian buster/main i386 openmpi-common all 3.1.3-11 [165 kB] Get: 300 http://deb.debian.org/debian buster/main i386 libnl-3-dev i386 3.4.0-1 [107 kB] Get: 301 http://deb.debian.org/debian buster/main i386 libnl-route-3-dev i386 3.4.0-1 [193 kB] Get: 302 http://deb.debian.org/debian buster/main i386 libibverbs-dev i386 22.1-1 [385 kB] Get: 303 http://deb.debian.org/debian buster/main i386 libnuma-dev i386 2.0.12-1 [40.9 kB] Get: 304 http://deb.debian.org/debian buster/main i386 libltdl-dev i386 2.4.6-9 [164 kB] Get: 305 http://deb.debian.org/debian buster/main i386 libhwloc-dev i386 1.11.12-3 [185 kB] Get: 306 http://deb.debian.org/debian buster/main i386 openmpi-bin i386 3.1.3-11 [200 kB] Get: 307 http://deb.debian.org/debian buster/main i386 libopenmpi-dev i386 3.1.3-11 [963 kB] Get: 308 http://deb.debian.org/debian buster/main i386 mpi-default-dev i386 1.13 [5476 B] Get: 309 http://deb.debian.org/debian buster/main i386 libboost-mpi1.67-dev i386 1.67.0-13+deb10u1 [388 kB] Get: 310 http://deb.debian.org/debian buster/main i386 libboost-mpi-dev i386 1.67.0.1 [3732 B] Get: 311 http://deb.debian.org/debian buster/main i386 libcharls2 i386 2.0.0+dfsg-1 [66.9 kB] Get: 312 http://deb.debian.org/debian buster/main i386 libcharls-dev i386 2.0.0+dfsg-1 [8020 B] Get: 313 http://deb.debian.org/debian buster/main i386 libcurl3-gnutls i386 7.64.0-4+deb10u1 [355 kB] Get: 314 http://deb.debian.org/debian buster/main i386 libcurl4-gnutls-dev i386 7.64.0-4+deb10u1 [453 kB] Get: 315 http://deb.debian.org/debian buster/main i386 libdap25 i386 3.20.3-1 [594 kB] Get: 316 http://deb.debian.org/debian buster/main i386 libdapserver7v5 i386 3.20.3-1 [132 kB] Get: 317 http://deb.debian.org/debian buster/main i386 libdapclient6v5 i386 3.20.3-1 [212 kB] Get: 318 http://deb.debian.org/debian buster/main i386 libicu-dev i386 63.1-6+deb10u1 [9377 kB] Get: 319 http://deb.debian.org/debian buster/main i386 libxml2-dev i386 2.9.4+dfsg1-7+b3 [843 kB] Get: 320 http://deb.debian.org/debian buster/main i386 uuid-dev i386 2.33.1-0.1 [94.0 kB] Get: 321 http://deb.debian.org/debian buster/main i386 pkg-config i386 0.29-6 [64.7 kB] Get: 322 http://deb.debian.org/debian buster/main i386 libdap-dev i386 3.20.3-1 [947 kB] Get: 323 http://deb.debian.org/debian buster/main i386 libdrm-dev i386 2.4.97-1 [131 kB] Get: 324 http://deb.debian.org/debian buster/main i386 libeigen3-dev all 3.3.7-1 [850 kB] Get: 325 http://deb.debian.org/debian buster/main i386 libpopt0 i386 1.16-12 [51.7 kB] Get: 326 http://deb.debian.org/debian buster/main i386 libepsilon1 i386 0.9.2+dfsg-4 [42.3 kB] Get: 327 http://deb.debian.org/debian buster/main i386 libepsilon-dev i386 0.9.2+dfsg-4 [53.3 kB] Get: 328 http://deb.debian.org/debian buster/main i386 libexpat1-dev i386 2.2.6-2+deb10u1 [156 kB] Get: 329 http://deb.debian.org/debian buster/main i386 libpng-dev i386 1.6.36-6 [310 kB] Get: 330 http://deb.debian.org/debian buster/main i386 libfreetype6-dev i386 2.9.1-3+deb10u1 [565 kB] Get: 331 http://deb.debian.org/debian buster/main i386 libfontconfig1-dev i386 2.13.1-2 [980 kB] Get: 332 http://deb.debian.org/debian buster/main i386 libfreexl1 i386 1.0.5-3 [35.2 kB] Get: 333 http://deb.debian.org/debian buster/main i386 libfreexl-dev i386 1.0.5-3 [34.1 kB] Get: 334 http://deb.debian.org/debian buster/main i386 libfyba0 i386 4.1.1-6 [125 kB] Get: 335 http://deb.debian.org/debian buster/main i386 libfyba-dev i386 4.1.1-6 [183 kB] Get: 336 http://deb.debian.org/debian buster/main i386 libgeos-3.7.1 i386 3.7.1-1 [791 kB] Get: 337 http://deb.debian.org/debian buster/main i386 libgeos-c1v5 i386 3.7.1-1 [304 kB] Get: 338 http://deb.debian.org/debian buster/main i386 proj-data all 5.2.0-1 [6986 kB] Get: 339 http://deb.debian.org/debian buster/main i386 libproj13 i386 5.2.0-1 [234 kB] Get: 340 http://deb.debian.org/debian buster/main i386 libgeotiff2 i386 1.4.3-1 [71.5 kB] Get: 341 http://deb.debian.org/debian buster/main i386 libgif7 i386 5.1.4-3 [44.4 kB] Get: 342 http://deb.debian.org/debian buster/main i386 libhdf4-0-alt i386 4.2.13-4 [283 kB] Get: 343 http://deb.debian.org/debian buster/main i386 libjson-c3 i386 0.12.1+ds-2 [28.7 kB] Get: 344 http://deb.debian.org/debian buster/main i386 libminizip1 i386 1.1-8+b1 [24.3 kB] Get: 345 http://deb.debian.org/debian buster/main i386 liburiparser1 i386 0.9.1-1 [51.8 kB] Get: 346 http://deb.debian.org/debian buster/main i386 libkmlbase1 i386 1.3.0-7 [52.6 kB] Get: 347 http://deb.debian.org/debian buster/main i386 libkmldom1 i386 1.3.0-7 [196 kB] Get: 348 http://deb.debian.org/debian buster/main i386 libkmlengine1 i386 1.3.0-7 [85.4 kB] Get: 349 http://deb.debian.org/debian buster/main i386 libkmlconvenience1 i386 1.3.0-7 [54.2 kB] Get: 350 http://deb.debian.org/debian buster/main i386 libkmlregionator1 i386 1.3.0-7 [26.5 kB] Get: 351 http://deb.debian.org/debian buster/main i386 libkmlxsd1 i386 1.3.0-7 [36.7 kB] Get: 352 http://deb.debian.org/debian buster/main i386 libnetcdf13 i386 1:4.6.2-1 [440 kB] Get: 353 http://deb.debian.org/debian buster/main i386 libodbc1 i386 2.3.6-0.1 [236 kB] Get: 354 http://deb.debian.org/debian buster/main i386 libogdi3.2 i386 3.2.1+ds-4 [246 kB] Get: 355 http://deb.debian.org/debian buster/main i386 liblcms2-2 i386 2.9-3 [156 kB] Get: 356 http://deb.debian.org/debian buster/main i386 libnspr4 i386 2:4.20-1 [122 kB] Get: 357 http://deb.debian.org/debian buster/main i386 libnss3 i386 2:3.42.1-1+deb10u2 [1237 kB] Get: 358 http://deb.debian.org/debian buster/main i386 libpoppler82 i386 0.71.0-5 [1548 kB] Get: 359 http://deb.debian.org/debian buster/main i386 libpq5 i386 11.7-0+deb10u1 [174 kB] Get: 360 http://deb.debian.org/debian buster/main i386 libqhull7 i386 2015.2-4 [206 kB] Get: 361 http://deb.debian.org/debian buster/main i386 libspatialite7 i386 4.3.0a-5+b2 [1265 kB] Get: 362 http://deb.debian.org/debian buster/main i386 libxerces-c3.2 i386 3.2.2+debian-1+b1 [955 kB] Get: 363 http://deb.debian.org/debian buster/main i386 odbcinst i386 2.3.6-0.1 [48.8 kB] Get: 364 http://deb.debian.org/debian buster/main i386 odbcinst1debian2 i386 2.3.6-0.1 [81.0 kB] Get: 365 http://deb.debian.org/debian buster/main i386 libgdal20 i386 2.4.0+dfsg-1+b1 [6689 kB] Get: 366 http://deb.debian.org/debian buster/main i386 libgeos-dev i386 3.7.1-1 [324 kB] Get: 367 http://deb.debian.org/debian buster/main i386 libjbig-dev i386 2.1-3.1+b2 [30.8 kB] Get: 368 http://deb.debian.org/debian buster/main i386 liblzma-dev i386 5.2.4-1 [219 kB] Get: 369 http://deb.debian.org/debian buster/main i386 libtiffxx5 i386 4.1.0+git191117-2~deb10u1 [118 kB] Get: 370 http://deb.debian.org/debian buster/main i386 libtiff-dev i386 4.1.0+git191117-2~deb10u1 [413 kB] Get: 371 http://deb.debian.org/debian buster/main i386 libgeotiff-dev i386 1.4.3-1 [102 kB] Get: 372 http://deb.debian.org/debian buster/main i386 libgif-dev i386 5.1.4-3 [47.6 kB] Get: 373 http://deb.debian.org/debian buster/main i386 libnetcdf-dev i386 1:4.6.2-1 [82.7 kB] Get: 374 http://deb.debian.org/debian buster/main i386 libhdf4-alt-dev i386 4.2.13-4 [391 kB] Get: 375 http://deb.debian.org/debian buster/main i386 libjson-c-dev i386 0.12.1+ds-2 [41.2 kB] Get: 376 http://deb.debian.org/debian buster/main i386 libminizip-dev i386 1.1-8+b1 [31.5 kB] Get: 377 http://deb.debian.org/debian buster/main i386 liburiparser-dev i386 0.9.1-1 [21.3 kB] Get: 378 http://deb.debian.org/debian buster/main i386 libkml-dev i386 1.3.0-7 [939 kB] Get: 379 http://deb.debian.org/debian buster/main i386 libproj-dev i386 5.2.0-1 [296 kB] Get: 380 http://deb.debian.org/debian buster/main i386 libogdi3.2-dev i386 3.2.1+ds-4 [38.2 kB] Get: 381 http://deb.debian.org/debian buster/main i386 libopenjp2-7-dev i386 2.3.0-2+deb10u1 [44.3 kB] Get: 382 http://deb.debian.org/debian buster/main i386 libpcre16-3 i386 2:8.39-12 [258 kB] Get: 383 http://deb.debian.org/debian buster/main i386 libpcre32-3 i386 2:8.39-12 [250 kB] Get: 384 http://deb.debian.org/debian buster/main i386 libpcrecpp0v5 i386 2:8.39-12 [153 kB] Get: 385 http://deb.debian.org/debian buster/main i386 libpcre3-dev i386 2:8.39-12 [656 kB] Get: 386 http://deb.debian.org/debian buster/main i386 libpoppler-dev i386 0.71.0-5 [23.7 kB] Get: 387 http://deb.debian.org/debian buster/main i386 libpoppler-private-dev i386 0.71.0-5 [187 kB] Get: 388 http://deb.debian.org/debian buster/main i386 libpq-dev i386 11.7-0+deb10u1 [172 kB] Get: 389 http://deb.debian.org/debian buster/main i386 libqhull-r7 i386 2015.2-4 [203 kB] Get: 390 http://deb.debian.org/debian buster/main i386 libqhull-dev i386 2015.2-4 [425 kB] Get: 391 http://deb.debian.org/debian buster/main i386 libsqlite3-dev i386 3.27.2-3 [823 kB] Get: 392 http://deb.debian.org/debian buster/main i386 libspatialite-dev i386 4.3.0a-5+b2 [1448 kB] Get: 393 http://deb.debian.org/debian buster/main i386 libwebpdemux2 i386 0.6.1-2 [87.8 kB] Get: 394 http://deb.debian.org/debian buster/main i386 libwebp-dev i386 0.6.1-2 [363 kB] Get: 395 http://deb.debian.org/debian buster/main i386 libxerces-c-dev i386 3.2.2+debian-1+b1 [1777 kB] Get: 396 http://deb.debian.org/debian buster/main i386 libzstd-dev i386 1.3.8+dfsg-3 [286 kB] Get: 397 http://deb.debian.org/debian buster/main i386 unixodbc-dev i386 2.3.6-0.1 [279 kB] Get: 398 http://deb.debian.org/debian buster/main i386 libgdal-dev i386 2.4.0+dfsg-1+b1 [8708 kB] Get: 399 http://deb.debian.org/debian buster/main i386 xorg-sgml-doctools all 1:1.11-1 [21.9 kB] Get: 400 http://deb.debian.org/debian buster/main i386 x11proto-dev all 2018.4-4 [251 kB] Get: 401 http://deb.debian.org/debian buster/main i386 x11proto-core-dev all 2018.4-4 [3128 B] Get: 402 http://deb.debian.org/debian buster/main i386 libxau-dev i386 1:1.0.8-1+b2 [23.6 kB] Get: 403 http://deb.debian.org/debian buster/main i386 libxdmcp-dev i386 1:1.1.2-3 [42.7 kB] Get: 404 http://deb.debian.org/debian buster/main i386 xtrans-dev all 1.3.5-1 [100 kB] Get: 405 http://deb.debian.org/debian buster/main i386 libpthread-stubs0-dev i386 0.4-1 [5340 B] Get: 406 http://deb.debian.org/debian buster/main i386 libxcb1-dev i386 1.13.1-2 [180 kB] Get: 407 http://deb.debian.org/debian buster/main i386 libx11-dev i386 2:1.6.7-1 [856 kB] Get: 408 http://deb.debian.org/debian buster/main i386 mesa-common-dev i386 18.3.6-2+deb10u1 [611 kB] Get: 409 http://deb.debian.org/debian buster/main i386 libglvnd-core-dev i386 1.1.0-1 [13.2 kB] Get: 410 http://deb.debian.org/debian buster/main i386 libgles1 i386 1.1.0-1 [13.9 kB] Get: 411 http://deb.debian.org/debian buster/main i386 libgles2 i386 1.1.0-1 [18.8 kB] Get: 412 http://deb.debian.org/debian buster/main i386 libopengl0 i386 1.1.0-1 [31.0 kB] Get: 413 http://deb.debian.org/debian buster/main i386 libglvnd-dev i386 1.1.0-1 [5128 B] Get: 414 http://deb.debian.org/debian buster/main i386 libx11-xcb-dev i386 2:1.6.7-1 [192 kB] Get: 415 http://deb.debian.org/debian buster/main i386 libxcb-dri3-dev i386 1.13.1-2 [101 kB] Get: 416 http://deb.debian.org/debian buster/main i386 libxcb-render0-dev i386 1.13.1-2 [113 kB] Get: 417 http://deb.debian.org/debian buster/main i386 libxcb-randr0-dev i386 1.13.1-2 [116 kB] Get: 418 http://deb.debian.org/debian buster/main i386 libxcb-shape0-dev i386 1.13.1-2 [101 kB] Get: 419 http://deb.debian.org/debian buster/main i386 libxcb-xfixes0-dev i386 1.13.1-2 [106 kB] Get: 420 http://deb.debian.org/debian buster/main i386 libxcb-sync-dev i386 1.13.1-2 [105 kB] Get: 421 http://deb.debian.org/debian buster/main i386 libxcb-present-dev i386 1.13.1-2 [101 kB] Get: 422 http://deb.debian.org/debian buster/main i386 libxshmfence-dev i386 1.3-1 [8560 B] Get: 423 http://deb.debian.org/debian buster/main i386 libxcb-dri2-0-dev i386 1.13.1-2 [102 kB] Get: 424 http://deb.debian.org/debian buster/main i386 libxcb-glx0-dev i386 1.13.1-2 [123 kB] Get: 425 http://deb.debian.org/debian buster/main i386 x11proto-fixes-dev all 1:2018.4-4 [3140 B] Get: 426 http://deb.debian.org/debian buster/main i386 libxfixes-dev i386 1:5.0.3-1 [24.3 kB] Get: 427 http://deb.debian.org/debian buster/main i386 x11proto-damage-dev all 1:2018.4-4 [3140 B] Get: 428 http://deb.debian.org/debian buster/main i386 libxdamage-dev i386 1:1.1.4-3+b3 [14.9 kB] Get: 429 http://deb.debian.org/debian buster/main i386 x11proto-xext-dev all 2018.4-4 [3128 B] Get: 430 http://deb.debian.org/debian buster/main i386 libxext-dev i386 2:1.3.3-1+b2 [110 kB] Get: 431 http://deb.debian.org/debian buster/main i386 x11proto-xf86vidmode-dev all 2018.4-4 [3140 B] Get: 432 http://deb.debian.org/debian buster/main i386 libxxf86vm-dev i386 1:1.1.4-1+b2 [26.3 kB] Get: 433 http://deb.debian.org/debian buster/main i386 libgl1-mesa-dev i386 18.3.6-2+deb10u1 [48.0 kB] Get: 434 http://deb.debian.org/debian buster/main i386 libgl2ps1.4 i386 1.4.0+dfsg1-2 [39.3 kB] Get: 435 http://deb.debian.org/debian buster/main i386 libgl2ps-dev i386 1.4.0+dfsg1-2 [14.8 kB] Get: 436 http://deb.debian.org/debian buster/main i386 libglu1-mesa i386 9.0.0-2.1+b3 [179 kB] Get: 437 http://deb.debian.org/debian buster/main i386 libglu1-mesa-dev i386 9.0.0-2.1+b3 [223 kB] Get: 438 http://deb.debian.org/debian buster/main i386 libhdf5-openmpi-103 i386 1.10.4+repack-10 [1348 kB] Get: 439 http://deb.debian.org/debian buster/main i386 libhdf5-openmpi-dev i386 1.10.4+repack-10 [2645 kB] Get: 440 http://deb.debian.org/debian buster/main i386 libhdf5-mpi-dev i386 1.10.4+repack-10 [27.3 kB] Get: 441 http://deb.debian.org/debian buster/main i386 libice-dev i386 2:1.0.9-2 [70.2 kB] Get: 442 http://deb.debian.org/debian buster/main i386 libjs-jquery all 3.3.1~dfsg-3 [332 kB] Get: 443 http://deb.debian.org/debian buster/main i386 libjs-underscore all 1.9.1~dfsg-1 [99.4 kB] Get: 444 http://deb.debian.org/debian buster/main i386 libjs-sphinxdoc all 1.8.4-1 [95.9 kB] Get: 445 http://deb.debian.org/debian buster/main i386 libjsoncpp-dev i386 1.7.4-3 [87.7 kB] Get: 446 http://deb.debian.org/debian buster/main i386 libnetcdf-c++4 i386 4.2-11 [37.5 kB] Get: 447 http://deb.debian.org/debian buster/main i386 libnetcdf-cxx-legacy-dev i386 4.2-11 [57.1 kB] Get: 448 http://deb.debian.org/debian buster/main i386 libogg-dev i386 1.3.2-1+b1 [197 kB] Get: 449 http://deb.debian.org/debian buster/main i386 libpython2.7 i386 2.7.16-2+deb10u1 [1059 kB] Get: 450 http://deb.debian.org/debian buster/main i386 libpython2.7-dev i386 2.7.16-2+deb10u1 [31.4 MB] Get: 451 http://deb.debian.org/debian buster/main i386 libpython2-dev i386 2.7.16-1 [20.9 kB] Get: 452 http://deb.debian.org/debian buster/main i386 libpython-dev i386 2.7.16-1 [20.9 kB] Get: 453 http://deb.debian.org/debian buster/main i386 libqt5opengl5 i386 5.11.3+dfsg1-1+deb10u3 [173 kB] Get: 454 http://deb.debian.org/debian buster/main i386 libsm-dev i386 2:1.2.3-1 [38.8 kB] Get: 455 http://deb.debian.org/debian buster/main i386 libsodium23 i386 1.0.17-1 [182 kB] Get: 456 http://deb.debian.org/debian buster/main i386 libswscale5 i386 7:4.1.4-1~deb10u1 [199 kB] Get: 457 http://deb.debian.org/debian buster/main i386 libswscale-dev i386 7:4.1.4-1~deb10u1 [222 kB] Get: 458 http://deb.debian.org/debian buster/main i386 libtcl8.6 i386 8.6.9+dfsg-2 [1065 kB] Get: 459 http://deb.debian.org/debian buster/main i386 libtheora-dev i386 1.1.1+dfsg.1-15 [184 kB] Get: 460 http://deb.debian.org/debian buster/main i386 libxft2 i386 2.3.2-2 [58.2 kB] Get: 461 http://deb.debian.org/debian buster/main i386 libxss1 i386 1:1.2.3-1 [18.1 kB] Get: 462 http://deb.debian.org/debian buster/main i386 libtk8.6 i386 8.6.9-2 [809 kB] Get: 463 http://deb.debian.org/debian buster/main i386 libxt6 i386 1:1.1.5-1+b3 [195 kB] Get: 464 http://deb.debian.org/debian buster/main i386 libvtk6.3 i386 6.3.0+dfsg2-2+b5 [33.5 MB] Get: 465 http://deb.debian.org/debian buster/main i386 libvtk6.3-qt i386 6.3.0+dfsg2-2+b5 [268 kB] Get: 466 http://deb.debian.org/debian buster/main i386 libvtk6-jni i386 6.3.0+dfsg2-2+b5 [4533 kB] Get: 467 http://deb.debian.org/debian buster/main i386 libvtk6-java i386 6.3.0+dfsg2-2+b5 [3329 kB] Get: 468 http://deb.debian.org/debian buster/main i386 libxrender-dev i386 1:0.9.10-1 [42.2 kB] Get: 469 http://deb.debian.org/debian buster/main i386 libxft-dev i386 2.3.2-2 [70.4 kB] Get: 470 http://deb.debian.org/debian buster/main i386 x11proto-scrnsaver-dev all 2018.4-4 [3136 B] Get: 471 http://deb.debian.org/debian buster/main i386 libxss-dev i386 1:1.2.3-1 [23.8 kB] Get: 472 http://deb.debian.org/debian buster/main i386 libxt-dev i386 1:1.1.5-1+b3 [439 kB] Get: 473 http://deb.debian.org/debian buster/main i386 python-cbor i386 1.0.0-1+b1 [22.7 kB] Get: 474 http://deb.debian.org/debian buster/main i386 python-concurrent.futures all 3.2.0-2 [36.6 kB] Get: 475 http://deb.debian.org/debian buster/main i386 python-configparser all 3.5.0b2-1 [59.2 kB] Get: 476 http://deb.debian.org/debian buster/main i386 python-future all 0.16.0-1 [348 kB] Get: 477 http://deb.debian.org/debian buster/main i386 python-lz4 i386 1.1.0+dfsg-1 [25.2 kB] Get: 478 http://deb.debian.org/debian buster/main i386 python-cffi-backend i386 1.12.2-1 [82.3 kB] Get: 479 http://deb.debian.org/debian buster/main i386 python-six all 1.12.0-1 [15.7 kB] Get: 480 http://deb.debian.org/debian buster/main i386 python-nacl i386 1.3.0-2 [47.1 kB] Get: 481 http://deb.debian.org/debian buster/main i386 python-asn1crypto all 0.24.0-1 [78.1 kB] Get: 482 http://deb.debian.org/debian buster/main i386 python-enum34 all 1.1.6-2 [35.3 kB] Get: 483 http://deb.debian.org/debian buster/main i386 python-ipaddress all 1.0.17-1 [18.1 kB] Get: 484 http://deb.debian.org/debian buster/main i386 python-cryptography i386 2.6.1-3+deb10u2 [201 kB] Get: 485 http://deb.debian.org/debian buster/main i386 python-openssl all 19.0.0-1 [52.0 kB] Get: 486 http://deb.debian.org/debian buster/main i386 python-pyqrcode all 1.2.1-2 [30.1 kB] Get: 487 http://deb.debian.org/debian buster/main i386 python-attr all 18.2.0-1 [37.2 kB] Get: 488 http://deb.debian.org/debian buster/main i386 python-pyasn1 all 0.4.2-3 [57.6 kB] Get: 489 http://deb.debian.org/debian buster/main i386 python-pyasn1-modules all 0.2.1-0.2 [34.4 kB] Get: 490 http://deb.debian.org/debian buster/main i386 python-service-identity all 16.0.0-2 [9350 B] Get: 491 http://deb.debian.org/debian buster/main i386 python-snappy i386 0.5.3-1 [16.4 kB] Get: 492 http://deb.debian.org/debian buster/main i386 python-trie all 0.2+ds-1 [7034 B] Get: 493 http://deb.debian.org/debian buster/main i386 python-trollius all 2.1~b1-5 [95.0 kB] Get: 494 http://deb.debian.org/debian buster/main i386 python-twisted-bin i386 18.9.0-3 [23.0 kB] Get: 495 http://deb.debian.org/debian buster/main i386 python-pkg-resources all 40.8.0-1 [182 kB] Get: 496 http://deb.debian.org/debian buster/main i386 python-zope.interface i386 4.3.2-1+b2 [90.1 kB] Get: 497 http://deb.debian.org/debian buster/main i386 python-automat all 0.6.0-1 [25.0 kB] Get: 498 http://deb.debian.org/debian buster/main i386 python-constantly all 15.1.0-1 [7902 B] Get: 499 http://deb.debian.org/debian buster/main i386 python-hyperlink all 17.3.1-2 [29.2 kB] Get: 500 http://deb.debian.org/debian buster/main i386 python-incremental all 16.10.1-3 [14.4 kB] Get: 501 http://deb.debian.org/debian buster/main i386 python-twisted-core all 18.9.0-3 [1997 kB] Get: 502 http://deb.debian.org/debian buster/main i386 python-twisted all 18.9.0-3 [13.4 kB] Get: 503 http://deb.debian.org/debian buster/main i386 python-txaio all 2.10.0-1 [18.7 kB] Get: 504 http://deb.debian.org/debian buster/main i386 python-u-msgpack all 2.1-1 [7226 B] Get: 505 http://deb.debian.org/debian buster/main i386 python-ubjson i386 0.12.0-1 [32.5 kB] Get: 506 http://deb.debian.org/debian buster/main i386 python-wsaccel i386 0.6.2-1+b1 [39.4 kB] Get: 507 http://deb.debian.org/debian buster/main i386 python-autobahn all 17.10.1+dfsg1-3+deb10u1 [163 kB] Get: 508 http://deb.debian.org/debian buster/main i386 mpi-default-bin i386 1.13 [4672 B] Get: 509 http://deb.debian.org/debian buster/main i386 python-mpi4py i386 2.0.0-3+b3 [341 kB] Get: 510 http://deb.debian.org/debian buster/main i386 python-vtk6 i386 6.3.0+dfsg2-2+b5 [295 kB] Get: 511 http://deb.debian.org/debian buster/main i386 tcl8.6 i386 8.6.9+dfsg-2 [123 kB] Get: 512 http://deb.debian.org/debian buster/main i386 tcl8.6-dev i386 8.6.9+dfsg-2 [1086 kB] Get: 513 http://deb.debian.org/debian buster/main i386 tcl i386 8.6.9+1 [5636 B] Get: 514 http://deb.debian.org/debian buster/main i386 tcl-dev i386 8.6.9+1 [8192 B] Get: 515 http://deb.debian.org/debian buster/main i386 tcl-vtk6 i386 6.3.0+dfsg2-2+b5 [152 kB] Get: 516 http://deb.debian.org/debian buster/main i386 tk8.6 i386 8.6.9-2 [72.2 kB] Get: 517 http://deb.debian.org/debian buster/main i386 tk8.6-dev i386 8.6.9-2 [835 kB] Get: 518 http://deb.debian.org/debian buster/main i386 tk i386 8.6.9+1 [5676 B] Get: 519 http://deb.debian.org/debian buster/main i386 tk-dev i386 8.6.9+1 [5492 B] Get: 520 http://deb.debian.org/debian buster/main i386 vtk6 i386 6.3.0+dfsg2-2+b5 [197 kB] Get: 521 http://deb.debian.org/debian buster/main i386 libvtk6-dev i386 6.3.0+dfsg2-2+b5 [2149 kB] Fetched 316 MB in 2min 31s (2092 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19234 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_i386.deb ... Unpacking libbsd0:i386 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_i386.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../02-libuchardet0_0.0.6-3_i386.deb ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20699 files and directories currently installed.) Preparing to unpack .../python2_2.7.16-1_i386.deb ... Unpacking python2 (2.7.16-1) ... Setting up python-minimal (2.7.16-1) ... Selecting previously unselected package python. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20732 files and directories currently installed.) Preparing to unpack .../000-python_2.7.16-1_i386.deb ... Unpacking python (2.7.16-1) ... Selecting previously unselected package libglib2.0-0:i386. Preparing to unpack .../001-libglib2.0-0_2.58.3-2+deb10u2_i386.deb ... Unpacking libglib2.0-0:i386 (2.58.3-2+deb10u2) ... Selecting previously unselected package libcap2:i386. Preparing to unpack .../002-libcap2_1%3a2.25-2_i386.deb ... Unpacking libcap2:i386 (1:2.25-2) ... Selecting previously unselected package libcap2-bin. Preparing to unpack .../003-libcap2-bin_1%3a2.25-2_i386.deb ... Unpacking libcap2-bin (1:2.25-2) ... Selecting previously unselected package libgstreamer1.0-0:i386. Preparing to unpack .../004-libgstreamer1.0-0_1.14.4-1_i386.deb ... Unpacking libgstreamer1.0-0:i386 (1.14.4-1) ... Selecting previously unselected package liborc-0.4-0:i386. Preparing to unpack .../005-liborc-0.4-0_1%3a0.4.28-3.1_i386.deb ... Unpacking liborc-0.4-0:i386 (1:0.4.28-3.1) ... Selecting previously unselected package iso-codes. Preparing to unpack .../006-iso-codes_4.2-1_all.deb ... Unpacking iso-codes (4.2-1) ... Selecting previously unselected package libgstreamer-plugins-base1.0-0:i386. Preparing to unpack .../007-libgstreamer-plugins-base1.0-0_1.14.4-2_i386.deb ... Unpacking libgstreamer-plugins-base1.0-0:i386 (1.14.4-2) ... Selecting previously unselected package libhyphen0:i386. 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Unpacking libwayland-server0:i386 (1.16.0-1) ... Selecting previously unselected package libgbm1:i386. Preparing to unpack .../026-libgbm1_18.3.6-2+deb10u1_i386.deb ... Unpacking libgbm1:i386 (18.3.6-2+deb10u1) ... Selecting previously unselected package libglapi-mesa:i386. Preparing to unpack .../027-libglapi-mesa_18.3.6-2+deb10u1_i386.deb ... Unpacking libglapi-mesa:i386 (18.3.6-2+deb10u1) ... Selecting previously unselected package libwayland-client0:i386. Preparing to unpack .../028-libwayland-client0_1.16.0-1_i386.deb ... Unpacking libwayland-client0:i386 (1.16.0-1) ... Selecting previously unselected package libx11-xcb1:i386. Preparing to unpack .../029-libx11-xcb1_2%3a1.6.7-1_i386.deb ... Unpacking libx11-xcb1:i386 (2:1.6.7-1) ... Selecting previously unselected package libxau6:i386. Preparing to unpack .../030-libxau6_1%3a1.0.8-1+b2_i386.deb ... Unpacking libxau6:i386 (1:1.0.8-1+b2) ... Selecting previously unselected package libxdmcp6:i386. Preparing to unpack .../031-libxdmcp6_1%3a1.1.2-3_i386.deb ... Unpacking libxdmcp6:i386 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:i386. Preparing to unpack .../032-libxcb1_1.13.1-2_i386.deb ... Unpacking libxcb1:i386 (1.13.1-2) ... Selecting previously unselected package libxcb-dri2-0:i386. Preparing to unpack .../033-libxcb-dri2-0_1.13.1-2_i386.deb ... Unpacking libxcb-dri2-0:i386 (1.13.1-2) ... Selecting previously unselected package libxcb-dri3-0:i386. Preparing to unpack .../034-libxcb-dri3-0_1.13.1-2_i386.deb ... Unpacking libxcb-dri3-0:i386 (1.13.1-2) ... Selecting previously unselected package libxcb-present0:i386. Preparing to unpack .../035-libxcb-present0_1.13.1-2_i386.deb ... Unpacking libxcb-present0:i386 (1.13.1-2) ... Selecting previously unselected package libxcb-sync1:i386. Preparing to unpack .../036-libxcb-sync1_1.13.1-2_i386.deb ... Unpacking libxcb-sync1:i386 (1.13.1-2) ... Selecting previously unselected package libxcb-xfixes0:i386. 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Selecting previously unselected package libpciaccess0:i386. Preparing to unpack .../049-libpciaccess0_0.14-1_i386.deb ... Unpacking libpciaccess0:i386 (0.14-1) ... Selecting previously unselected package libdrm-intel1:i386. Preparing to unpack .../050-libdrm-intel1_2.4.97-1_i386.deb ... Unpacking libdrm-intel1:i386 (2.4.97-1) ... Selecting previously unselected package libdrm-nouveau2:i386. Preparing to unpack .../051-libdrm-nouveau2_2.4.97-1_i386.deb ... Unpacking libdrm-nouveau2:i386 (2.4.97-1) ... Selecting previously unselected package libdrm-radeon1:i386. Preparing to unpack .../052-libdrm-radeon1_2.4.97-1_i386.deb ... Unpacking libdrm-radeon1:i386 (2.4.97-1) ... Selecting previously unselected package libelf1:i386. Preparing to unpack .../053-libelf1_0.176-1.1_i386.deb ... Unpacking libelf1:i386 (0.176-1.1) ... Selecting previously unselected package libedit2:i386. Preparing to unpack .../054-libedit2_3.1-20181209-1_i386.deb ... Unpacking libedit2:i386 (3.1-20181209-1) ... Selecting previously unselected package libllvm7:i386. Preparing to unpack .../055-libllvm7_1%3a7.0.1-8_i386.deb ... Unpacking libllvm7:i386 (1:7.0.1-8) ... Selecting previously unselected package libsensors-config. Preparing to unpack .../056-libsensors-config_1%3a3.5.0-3_all.deb ... Unpacking libsensors-config (1:3.5.0-3) ... Selecting previously unselected package libsensors5:i386. Preparing to unpack .../057-libsensors5_1%3a3.5.0-3_i386.deb ... Unpacking libsensors5:i386 (1:3.5.0-3) ... Selecting previously unselected package libgl1-mesa-dri:i386. Preparing to unpack .../058-libgl1-mesa-dri_18.3.6-2+deb10u1_i386.deb ... Unpacking libgl1-mesa-dri:i386 (18.3.6-2+deb10u1) ... Selecting previously unselected package libglx-mesa0:i386. Preparing to unpack .../059-libglx-mesa0_18.3.6-2+deb10u1_i386.deb ... Unpacking libglx-mesa0:i386 (18.3.6-2+deb10u1) ... Selecting previously unselected package libglx0:i386. Preparing to unpack .../060-libglx0_1.1.0-1_i386.deb ... 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Setting up mysql-common (5.8+1.0.5) ... update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode Setting up libxau6:i386 (1:1.0.8-1+b2) ... Setting up libkeyutils1:i386 (1.6-6) ... Setting up libpsl5:i386 (0.20.2-2) ... Setting up libgnutls-openssl27:i386 (3.6.7-4+deb10u3) ... Setting up libsodium23:i386 (1.0.17-1) ... Setting up libmpg123-0:i386 (1.25.10-2) ... Setting up libogg0:i386 (1.3.2-1+b1) ... Setting up libzstd-dev:i386 (1.3.8+dfsg-3) ... Setting up mime-support (3.62) ... Setting up libspeex1:i386 (1.2~rc1.2-1+b2) ... Setting up proj-data (5.2.0-1) ... Setting up libshine3:i386 (3.1.1-2) ... Setting up libglvnd-core-dev:i386 (1.1.0-1) ... Setting up libpcre16-3:i386 (2:8.39-12) ... Setting up hdf5-helpers (1.10.4+repack-10) ... Setting up libtwolame0:i386 (0.3.13-4) ... Setting up libhyphen0:i386 (2.8.8-7) ... Setting up libdatrie1:i386 (0.2.12-2) ... Setting up libmagic-mgc (1:5.35-4+deb10u1) ... 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Setting up x11-common (1:7.7+19) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libsensors-config (1:3.5.0-3) ... Setting up libnghttp2-14:i386 (1.36.0-2+deb10u1) ... Setting up libmagic1:i386 (1:5.35-4+deb10u1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up xkb-data (2.26-2) ... Setting up libqhull7:i386 (2015.2-4) ... Setting up file (1:5.35-4+deb10u1) ... Setting up libcrystalhd3:i386 (1:0.0~git20110715.fdd2f19-13) ... Setting up libogg-dev:i386 (1.3.2-1+b1) ... Setting up libxvidcore4:i386 (2:1.3.5-1) ... Setting up libldap-common (2.4.47+dfsg-3+deb10u2) ... Setting up libpthread-stubs0-dev:i386 (0.4-1) ... Setting up libjbig0:i386 (2.1-3.1+b2) ... Setting up libgeos-3.7.1:i386 (3.7.1-1) ... Setting up libpcre2-16-0:i386 (10.32-5) ... Setting up libaec0:i386 (1.0.2-1) ... 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Setting up libunbound8:i386 (1.9.0-2+deb10u1) ... Setting up x11proto-damage-dev (1:2018.4-4) ... Setting up libfreetype6:i386 (2.9.1-3+deb10u1) ... Setting up libtiff-dev:i386 (4.1.0+git191117-2~deb10u1) ... Setting up libopenjp2-7-dev (2.3.0-2+deb10u1) ... Setting up libxcb-sync1:i386 (1.13.1-2) ... Setting up libkmlregionator1:i386 (1.3.0-7) ... Setting up x11proto-core-dev (2018.4-4) ... Setting up libgeos-dev (3.7.1-1) ... Setting up libhdf5-103:i386 (1.10.4+repack-10) ... Setting up shared-mime-info (1.10-1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libxkbcommon-x11-0:i386 (0.8.2-1) ... Setting up libeigen3-dev (3.3.7-1) ... Setting up libgssapi-krb5-2:i386 (1.17-3) ... Setting up libcroco3:i386 (0.6.12-3) ... Setting up libodbc1:i386 (2.3.6-0.1) ... Setting up ucf (3.0038+nmu1) ... 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Setting up libqt5sensors5:i386 (5.11.3-2) ... Setting up libepsilon-dev:i386 (0.9.2+dfsg-4) ... Setting up x11proto-fixes-dev (1:2018.4-4) ... Setting up x11proto-scrnsaver-dev (2018.4-4) ... Setting up libwacom2:i386 (0.32-1) ... Setting up libsm6:i386 (2:1.2.3-1) ... Setting up libopenmpt0:i386 (0.4.3-1) ... Setting up libavahi-client3:i386 (0.7-4+b1) ... Setting up libblas-dev:i386 (3.8.0-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so to provide /usr/lib/i386-linux-gnu/libblas.so (libblas.so-i386-linux-gnu) in auto mode Setting up libdrm-amdgpu1:i386 (2.4.97-1) ... Setting up libssh-gcrypt-4:i386 (0.8.7-1+deb10u1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libkml-dev:i386 (1.3.0-7) ... Setting up libxcb-dri3-0:i386 (1.13.1-2) ... Setting up libibverbs1:i386 (22.1-1) ... Setting up libgnutls-dane0:i386 (3.6.7-4+deb10u3) ... Setting up libpython2.7:i386 (2.7.16-2+deb10u1) ... Setting up liblapack3:i386 (3.8.0-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up libpython2.7-dev:i386 (2.7.16-2+deb10u1) ... Setting up libdrm-nouveau2:i386 (2.4.97-1) ... Setting up gettext (0.19.8.1-9) ... Setting up libxcb1-dev:i386 (1.13.1-2) ... Setting up python2.7 (2.7.16-2+deb10u1) ... Setting up libxrender1:i386 (1:0.9.10-1) ... Setting up libpmix2:i386 (3.1.2-3) ... Setting up libgbm1:i386 (18.3.6-2+deb10u1) ... Setting up ibverbs-providers:i386 (22.1-1) ... Setting up libpython2-stdlib:i386 (2.7.16-1) ... Setting up libgeotiff-dev:i386 (1.4.3-1) ... Setting up libsm-dev:i386 (2:1.2.3-1) ... Setting up libdrm-radeon1:i386 (2.4.97-1) ... Setting up fontconfig-config (2.13.1-2) ... Setting up openssh-client (1:7.9p1-10+deb10u2) ... Setting up libqt5positioning5:i386 (5.11.3+dfsg-2) ... Setting up libdrm-intel1:i386 (2.4.97-1) ... Setting up libgl1-mesa-dri:i386 (18.3.6-2+deb10u1) ... Setting up libhdf5-cpp-103:i386 (1.10.4+repack-10) ... Setting up libarpack2:i386 (3.7.0-2) ... Setting up libpq5:i386 (11.7-0+deb10u1) ... Setting up libx11-dev:i386 (2:1.6.7-1) ... Setting up libsuperlu5:i386 (5.2.1+dfsg1-4) ... Setting up libxext6:i386 (2:1.3.3-1+b2) ... Setting up libxcb-dri3-dev:i386 (1.13.1-2) ... Setting up libpq-dev (11.7-0+deb10u1) ... Setting up libcurl3-gnutls:i386 (7.64.0-4+deb10u1) ... Setting up libnetcdf13:i386 (1:4.6.2-1) ... Setting up libcurl4-gnutls-dev:i386 (7.64.0-4+deb10u1) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up python2 (2.7.16-1) ... Setting up libnetcdf-c++4 (4.2-11) ... Setting up libqt5network5:i386 (5.11.3+dfsg1-1+deb10u3) ... Setting up libfreetype6-dev:i386 (2.9.1-3+deb10u1) ... Setting up libxxf86vm1:i386 (1:1.1.4-1+b2) ... Setting up libinput-bin (1.12.6-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libnl-route-3-dev:i386 (3.4.0-1) ... Setting up libltdl-dev:i386 (2.4.6-9) ... Setting up libpython-stdlib:i386 (2.7.16-1) ... Setting up libegl-mesa0:i386 (18.3.6-2+deb10u1) ... Setting up libxcb-dri2-0-dev:i386 (1.13.1-2) ... Setting up libxfixes3:i386 (1:5.0.3-1) ... Setting up libqt5qml5:i386 (5.11.3-4) ... Setting up libgdk-pixbuf2.0-0:i386 (2.38.1+dfsg-1) ... Setting up libhdf5-dev (1.10.4+repack-10) ... update-alternatives: using /usr/lib/i386-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/i386-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up liblapack-dev:i386 (3.8.0-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so to provide /usr/lib/i386-linux-gnu/liblapack.so (liblapack.so-i386-linux-gnu) in auto mode Setting up libnetcdf-dev (1:4.6.2-1) ... Setting up libqt5webchannel5:i386 (5.11.3-2) ... Setting up libxcb-render0-dev:i386 (1.13.1-2) ... Setting up libxcb-glx0-dev:i386 (1.13.1-2) ... Setting up libxt6:i386 (1:1.1.5-1+b3) ... Setting up tcl-dev:i386 (8.6.9+1) ... Setting up libxcb-shape0-dev:i386 (1.13.1-2) ... Setting up libxext-dev:i386 (2:1.3.3-1+b2) ... Setting up libcups2:i386 (2.2.10-6+deb10u3) ... Setting up libvdpau1:i386 (1.1.1-10) ... Setting up libdapclient6v5:i386 (3.20.3-1) ... Setting up libegl1:i386 (1.1.0-1) ... Setting up cmake (3.13.4-1) ... Setting up libxcb-sync-dev:i386 (1.13.1-2) ... Setting up libpython2-dev:i386 (2.7.16-1) ... Setting up libhwloc-dev:i386 (1.11.12-3) ... Setting up libxcb-xfixes0-dev:i386 (1.13.1-2) ... Setting up libxss1:i386 (1:1.2.3-1) ... Setting up libfontconfig1:i386 (2.13.1-2) ... Setting up libarmadillo9 (1:9.200.7+dfsg-1) ... Setting up libbluray2:i386 (1:1.1.0-1) ... Setting up libsuperlu-dev:i386 (5.2.1+dfsg1-4) ... Setting up libva-x11-2:i386 (2.4.0-1) ... Setting up python (2.7.16-1) ... Setting up libxrender-dev:i386 (1:0.9.10-1) ... Setting up python-trie (0.2+ds-1) ... Setting up python-incremental (16.10.1-3) ... Setting up python-constantly (15.1.0-1) ... Setting up libdap-dev:i386 (3.20.3-1) ... Setting up python-hyperlink (17.3.1-2) ... Setting up python-ipaddress (1.0.17-1) ... Setting up python-cffi-backend (1.12.2-1) ... Setting up libgnutls28-dev:i386 (3.6.7-4+deb10u3) ... Setting up libinput10:i386 (1.12.6-2) ... Setting up librdmacm1:i386 (22.1-1) ... Setting up python-enum34 (1.1.6-2) ... Setting up libx11-xcb-dev:i386 (2:1.6.7-1) ... Setting up cython (0.29.2-2) ... Setting up fontconfig (2.13.1-2) ... Regenerating fonts cache... done. Setting up libdrm-dev:i386 (2.4.97-1) ... Setting up libxft2:i386 (2.3.2-2) ... Setting up libarpack2-dev:i386 (3.7.0-2) ... Setting up libfontconfig1-dev:i386 (2.13.1-2) ... Setting up libxdamage1:i386 (1:1.1.4-3+b3) ... Setting up libxerces-c3.2:i386 (3.2.2+debian-1+b1) ... Setting up libxi6:i386 (2:1.7.9-1) ... Setting up python-cbor (1.0.0-1+b1) ... Setting up python-pkg-resources (40.8.0-1) ... Setting up po-debconf (1.0.21) ... Setting up libxxf86vm-dev:i386 (1:1.1.4-1+b2) ... Setting up libtk8.6:i386 (8.6.9-2) ... Setting up libpango-1.0-0:i386 (1.42.4-8~deb10u1) ... Setting up python-pyqrcode (1.2.1-2) ... Setting up libpoppler82:i386 (0.71.0-5) ... Setting up python-asn1crypto (0.24.0-1) ... Setting up libnetcdf-cxx-legacy-dev (4.2-11) ... Setting up libibverbs-dev:i386 (22.1-1) ... Setting up libxss-dev:i386 (1:1.2.3-1) ... Setting up python-attr (18.2.0-1) ... Setting up libcairo2:i386 (1.16.0-4) ... Setting up libavutil56:i386 (7:4.1.4-1~deb10u1) ... Setting up libpython-dev:i386 (2.7.16-1) ... Setting up python-six (1.12.0-1) ... Setting up libarmadillo-dev (1:9.200.7+dfsg-1) ... Setting up libxfixes-dev:i386 (1:5.0.3-1) ... Setting up python-zope.interface (4.3.2-1+b2) ... Setting up python-configparser (3.5.0b2-1) ... Setting up python-wsaccel (0.6.2-1+b1) ... Setting up python-pyasn1 (0.4.2-3) ... Setting up libxcb-randr0-dev:i386 (1.13.1-2) ... Setting up libxt-dev:i386 (1:1.1.5-1+b3) ... Setting up python-nacl (1.3.0-2) ... Setting up libxerces-c-dev (3.2.2+debian-1+b1) ... Setting up libxcb-present-dev:i386 (1.13.1-2) ... Setting up python-pyasn1-modules (0.2.1-0.2) ... Setting up python-concurrent.futures (3.2.0-2) ... Setting up libhdf4-alt-dev (4.2.13-4) ... Setting up libmariadb-dev (1:10.3.22-0+deb10u1) ... Setting up libtheora0:i386 (1.1.1+dfsg.1-15) ... Setting up python-twisted-bin:i386 (18.9.0-3) ... Setting up mesa-common-dev:i386 (18.3.6-2+deb10u1) ... Setting up libswscale5:i386 (7:4.1.4-1~deb10u1) ... Setting up python-u-msgpack (2.1-1) ... Setting up libpangoft2-1.0-0:i386 (1.42.4-8~deb10u1) ... Setting up python-snappy (0.5.3-1) ... Setting up python-future (0.16.0-1) ... update-alternatives: using /usr/bin/python2-futurize to provide /usr/bin/futurize (futurize) in auto mode update-alternatives: using /usr/bin/python2-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode Setting up python-ubjson (0.12.0-1) ... Setting up libpangocairo-1.0-0:i386 (1.42.4-8~deb10u1) ... Setting up libxft-dev:i386 (2.3.2-2) ... Setting up libxdamage-dev:i386 (1:1.1.4-3+b3) ... Setting up libpoppler-dev:i386 (0.71.0-5) ... Setting up libavutil-dev:i386 (7:4.1.4-1~deb10u1) ... Setting up tk8.6 (8.6.9-2) ... Setting up libfabric1 (1.6.2-3) ... Setting up libmariadb-dev-compat:i386 (1:10.3.22-0+deb10u1) ... Setting up python-trollius (2.1~b1-5) ... Setting up libglx-mesa0:i386 (18.3.6-2+deb10u1) ... Setting up libglx0:i386 (1.1.0-1) ... Setting up libopenmpi3:i386 (3.1.3-11) ... Setting up python-automat (0.6.0-1) ... Setting up libpoppler-private-dev:i386 (0.71.0-5) ... Setting up python-cryptography (2.6.1-3+deb10u2) ... Setting up libboost-mpi1.67.0 (1.67.0-13+deb10u1) ... Setting up libswresample3:i386 (7:4.1.4-1~deb10u1) ... Setting up librsvg2-2:i386 (2.44.10-2.1) ... Setting up libhdf5-openmpi-103:i386 (1.10.4+repack-10) ... Setting up libgl1:i386 (1.1.0-1) ... Setting up libtheora-dev:i386 (1.1.1+dfsg.1-15) ... Setting up libswscale-dev:i386 (7:4.1.4-1~deb10u1) ... Setting up python-lz4 (1.1.0+dfsg-1) ... Setting up tk8.6-dev:i386 (8.6.9-2) ... Setting up libavcodec58:i386 (7:4.1.4-1~deb10u1) ... Setting up libglu1-mesa:i386 (9.0.0-2.1+b3) ... Setting up tk (8.6.9+1) ... Setting up python-openssl (19.0.0-1) ... Setting up openmpi-bin (3.1.3-11) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up python-service-identity (16.0.0-2) ... Setting up libchromaprint1:i386 (1.4.3-3) ... Setting up default-libmysqlclient-dev:i386 (1.0.5) ... Setting up libswresample-dev:i386 (7:4.1.4-1~deb10u1) ... Setting up libavformat58:i386 (7:4.1.4-1~deb10u1) ... Setting up libavcodec-dev:i386 (7:4.1.4-1~deb10u1) ... Setting up libqt5gui5:i386 (5.11.3+dfsg1-1+deb10u3) ... Setting up mpi-default-bin (1.13) ... Setting up libglvnd-dev:i386 (1.1.0-1) ... Setting up libqt5widgets5:i386 (5.11.3+dfsg1-1+deb10u3) ... Setting up libavformat-dev:i386 (7:4.1.4-1~deb10u1) ... Setting up libgl2ps1.4 (1.4.0+dfsg1-2) ... Setting up libqt5printsupport5:i386 (5.11.3+dfsg1-1+deb10u3) ... Setting up tk-dev:i386 (8.6.9+1) ... Setting up python-mpi4py (2.0.0-3+b3) ... Setting up libqt5opengl5:i386 (5.11.3+dfsg1-1+deb10u3) ... Setting up python-twisted-core (18.9.0-3) ... Setting up libgl1-mesa-dev:i386 (18.3.6-2+deb10u1) ... Setting up libopenmpi-dev:i386 (3.1.3-11) ... update-alternatives: using /usr/lib/i386-linux-gnu/openmpi/include to provide /usr/include/i386-linux-gnu/mpi (mpi-i386-linux-gnu) in auto mode Setting up libhdf5-openmpi-dev (1.10.4+repack-10) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode Setting up libqt5quick5:i386 (5.11.3-4) ... Setting up python-twisted (18.9.0-3) ... Setting up libqt5webkit5:i386 (5.212.0~alpha2-21) ... Setting up python-txaio (2.10.0-1) ... Setting up libgl2ps-dev (1.4.0+dfsg1-2) ... Setting up python-autobahn (17.10.1+dfsg1-3+deb10u1) ... Setting up libglu1-mesa-dev:i386 (9.0.0-2.1+b3) ... Setting up mpi-default-dev (1.13) ... Setting up libboost-mpi1.67-dev (1.67.0-13+deb10u1) ... Setting up libboost-mpi-dev (1.67.0.1) ... Setting up libhdf5-mpi-dev (1.10.4+repack-10) ... Setting up odbcinst (2.3.6-0.1) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Setting up odbcinst1debian2:i386 (2.3.6-0.1) ... Setting up libgdal20 (2.4.0+dfsg-1+b1) ... Setting up unixodbc-dev:i386 (2.3.6-0.1) ... Setting up libvtk6.3 (6.3.0+dfsg2-2+b5) ... Setting up debhelper (12.1.1) ... Setting up libvtk6.3-qt (6.3.0+dfsg2-2+b5) ... Setting up tcl-vtk6 (6.3.0+dfsg2-2+b5) ... Setting up libgdal-dev (2.4.0+dfsg-1+b1) ... Setting up python-vtk6 (6.3.0+dfsg2-2+b5) ... Setting up vtk6 (6.3.0+dfsg2-2+b5) ... Setting up libvtk6-jni (6.3.0+dfsg2-2+b5) ... Setting up libvtk6-java (6.3.0+dfsg2-2+b5) ... Setting up libvtk6-dev (6.3.0+dfsg2-2+b5) ... Processing triggers for libc-bin (2.28-10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/liggghts-3.8.0+repack1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package liggghts dpkg-buildpackage: info: source version 3.8.0+repack1-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Anton Gladky dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --buildsystem=cmake --builddirectory=/build/liggghts-3.8.0+repack1/debian/build dh_auto_clean -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_autoreconf_clean -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_clean -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build debian/rules build dh build --buildsystem=cmake --builddirectory=/build/liggghts-3.8.0+repack1/debian/build dh_update_autotools_config -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_autoreconf -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_auto_configure -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build cd debian/build && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu ../.. -- The C compiler identification is GNU 8.3.0 -- The CXX compiler identification is GNU 8.3.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Boost version: 1.67.0 -- Found the following Boost libraries: -- mpi -- serialization -- Found PythonLibs: /usr/lib/i386-linux-gnu/libpython2.7.so (found version "2.7.16") -- The imported target "vtkRenderingPythonTkWidgets" references the file "/usr/lib/i386-linux-gnu/libvtkRenderingPythonTkWidgets.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/cmake/vtk-6.3/VTKTargets.cmake" but not all the files it references. -- The imported target "vtk" references the file "/usr/bin/vtk" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/cmake/vtk-6.3/VTKTargets.cmake" but not all the files it references. -- Found VTK6 -- Found Eigen3 -- Found JPEG: /usr/lib/i386-linux-gnu/libjpeg.so (found version "62") -- Found MPI_C: /usr/lib/i386-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/i386-linux-gnu/openmpi/lib/libmpi_cxx.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY -- Build files have been written to: /build/liggghts-3.8.0+repack1/debian/build dh_auto_build -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build cd debian/build && make -j10 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/liggghts-3.8.0+repack1/debian/build' /usr/bin/cmake -S/build/liggghts-3.8.0+repack1 -B/build/liggghts-3.8.0+repack1/debian/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/liggghts-3.8.0+repack1/debian/build/CMakeFiles /build/liggghts-3.8.0+repack1/debian/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/liggghts-3.8.0+repack1/debian/build' make -f src/CMakeFiles/GenerateHeaders.dir/build.make src/CMakeFiles/GenerateHeaders.dir/depend make[3]: Entering directory '/build/liggghts-3.8.0+repack1/debian/build' cd /build/liggghts-3.8.0+repack1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/liggghts-3.8.0+repack1 /build/liggghts-3.8.0+repack1/src /build/liggghts-3.8.0+repack1/debian/build /build/liggghts-3.8.0+repack1/debian/build/src /build/liggghts-3.8.0+repack1/debian/build/src/CMakeFiles/GenerateHeaders.dir/DependInfo.cmake --color= Scanning dependencies of target GenerateHeaders make[3]: Leaving directory '/build/liggghts-3.8.0+repack1/debian/build' make -f src/CMakeFiles/GenerateHeaders.dir/build.make src/CMakeFiles/GenerateHeaders.dir/build make[3]: Entering directory '/build/liggghts-3.8.0+repack1/debian/build' cd /build/liggghts-3.8.0+repack1/src && sh Make.sh style cd /build/liggghts-3.8.0+repack1/src && sh Make.sh models Generating model list, this could take a moment... You have 3240 model combinations. (limit = 1200) Some model combinations are skipped automatically. You may add missing combinations by yourself to 'style_contact_model_user.whitelist'. Creating list of contact models completed. make[3]: Leaving directory '/build/liggghts-3.8.0+repack1/debian/build' [ 0%] Built target GenerateHeaders make -f src/CMakeFiles/libliggghts.dir/build.make src/CMakeFiles/libliggghts.dir/depend make[3]: Entering directory '/build/liggghts-3.8.0+repack1/debian/build' cd /build/liggghts-3.8.0+repack1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/liggghts-3.8.0+repack1 /build/liggghts-3.8.0+repack1/src /build/liggghts-3.8.0+repack1/debian/build /build/liggghts-3.8.0+repack1/debian/build/src /build/liggghts-3.8.0+repack1/debian/build/src/CMakeFiles/libliggghts.dir/DependInfo.cmake --color= Scanning dependencies of target libliggghts make[3]: Leaving directory '/build/liggghts-3.8.0+repack1/debian/build' make -f src/CMakeFiles/libliggghts.dir/build.make src/CMakeFiles/libliggghts.dir/build make[3]: Entering directory '/build/liggghts-3.8.0+repack1/debian/build' [ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec.cpp.o [ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o [ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o [ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o [ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o [ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec.cpp.o -c /build/liggghts-3.8.0+repack1/src/atom_vec.cpp [ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_map.cpp.o [ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom.cpp.o [ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o -c /build/liggghts-3.8.0+repack1/src/angle_hybrid.cpp [ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/angle.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/angle.cpp.o -c /build/liggghts-3.8.0+repack1/src/angle.cpp cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom.cpp.o -c /build/liggghts-3.8.0+repack1/src/atom.cpp cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_map.cpp.o -c /build/liggghts-3.8.0+repack1/src/atom_map.cpp cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o -c /build/liggghts-3.8.0+repack1/src/atom_vec_atomic.cpp cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o -c /build/liggghts-3.8.0+repack1/src/atom_vec_charge.cpp cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o -c /build/liggghts-3.8.0+repack1/src/atom_vec_ellipsoid.cpp cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o -c /build/liggghts-3.8.0+repack1/src/atom_vec_full.cpp cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o -c /build/liggghts-3.8.0+repack1/src/atom_vec_hybrid.cpp /build/liggghts-3.8.0+repack1/src/angle_hybrid.cpp: In member function 'virtual void LAMMPS_NS::AngleHybrid::read_restart(FILE*)': /build/liggghts-3.8.0+repack1/src/angle_hybrid.cpp:363:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/angle_hybrid.cpp:372:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/angle_hybrid.cpp:375:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o -c /build/liggghts-3.8.0+repack1/src/atom_vec_line.cpp [ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_molecular.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_molecular.cpp.o -c /build/liggghts-3.8.0+repack1/src/atom_vec_molecular.cpp [ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sph.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_sph.cpp.o -c /build/liggghts-3.8.0+repack1/src/atom_vec_sph.cpp [ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o -c /build/liggghts-3.8.0+repack1/src/atom_vec_sph_var.cpp [ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sphere.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_sphere.cpp.o -c /build/liggghts-3.8.0+repack1/src/atom_vec_sphere.cpp [ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o -c /build/liggghts-3.8.0+repack1/src/atom_vec_sphere_w.cpp [ 5%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_superquadric.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_superquadric.cpp.o -c /build/liggghts-3.8.0+repack1/src/atom_vec_superquadric.cpp [ 5%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_tri.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_tri.cpp.o -c /build/liggghts-3.8.0+repack1/src/atom_vec_tri.cpp [ 5%] Building CXX object src/CMakeFiles/libliggghts.dir/bond.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/bond.cpp.o -c /build/liggghts-3.8.0+repack1/src/bond.cpp [ 6%] Building CXX object src/CMakeFiles/libliggghts.dir/bond_harmonic.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/bond_harmonic.cpp.o -c /build/liggghts-3.8.0+repack1/src/bond_harmonic.cpp [ 6%] Building CXX object src/CMakeFiles/libliggghts.dir/bond_hybrid.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/bond_hybrid.cpp.o -c /build/liggghts-3.8.0+repack1/src/bond_hybrid.cpp /build/liggghts-3.8.0+repack1/src/bond_harmonic.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)': /build/liggghts-3.8.0+repack1/src/bond_harmonic.cpp:200:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nbondtypes,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/bond_harmonic.cpp:201:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 6%] Building CXX object src/CMakeFiles/libliggghts.dir/bounding_box.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/bounding_box.cpp.o -c /build/liggghts-3.8.0+repack1/src/bounding_box.cpp [ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o -c /build/liggghts-3.8.0+repack1/src/cfd_datacoupling.cpp /build/liggghts-3.8.0+repack1/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)': /build/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:351:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:360:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:363:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o -c /build/liggghts-3.8.0+repack1/src/cfd_datacoupling_file.cpp [ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o -c /build/liggghts-3.8.0+repack1/src/cfd_datacoupling_mpi.cpp [ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_regionmodel_none.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/cfd_regionmodel_none.cpp.o -c /build/liggghts-3.8.0+repack1/src/cfd_regionmodel_none.cpp [ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/change_box.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/change_box.cpp.o -c /build/liggghts-3.8.0+repack1/src/change_box.cpp [ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/citeme.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/citeme.cpp.o -c /build/liggghts-3.8.0+repack1/src/citeme.cpp [ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/comm.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/comm.cpp.o -c /build/liggghts-3.8.0+repack1/src/comm.cpp [ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/compute.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute.cpp [ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_atom_molecule.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_atom_molecule.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_atom_molecule.cpp [ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_bond_local.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_bond_local.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_bond_local.cpp [ 10%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_centro_atom.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_centro_atom.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_centro_atom.cpp [ 10%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_cluster_atom.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_cluster_atom.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_cluster_atom.cpp [ 10%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_cna_atom.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_cna_atom.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_cna_atom.cpp [ 11%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_com.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_com.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_com.cpp [ 11%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_com_molecule.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_com_molecule.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_com_molecule.cpp [ 11%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_contact_atom.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_contact_atom.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_contact_atom.cpp [ 12%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_contact_atom_gran.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_contact_atom_gran.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_contact_atom_gran.cpp [ 12%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_coord_atom.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_coord_atom.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_coord_atom.cpp [ 12%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_displace_atom.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_displace_atom.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_displace_atom.cpp [ 13%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_erotate.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_erotate.cpp [ 13%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_asphere.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_erotate_asphere.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_erotate_asphere.cpp [ 13%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_multisphere.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_erotate_multisphere.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_erotate_multisphere.cpp [ 13%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_sphere.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_erotate_sphere.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_erotate_sphere.cpp [ 14%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_sphere_atom.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_erotate_sphere_atom.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_erotate_sphere_atom.cpp [ 14%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_superquadric.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_erotate_superquadric.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_erotate_superquadric.cpp [ 14%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_group_group.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_group_group.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_group_group.cpp [ 15%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_gyration.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_gyration.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_gyration.cpp [ 15%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_gyration_molecule.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_gyration_molecule.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_gyration_molecule.cpp [ 15%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_inertia_molecule.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_inertia_molecule.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_inertia_molecule.cpp [ 16%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_ke.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_ke.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_ke.cpp [ 16%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_ke_atom.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_ke_atom.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_ke_atom.cpp [ 16%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_ke_multisphere.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_ke_multisphere.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_ke_multisphere.cpp [ 17%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_msd.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_msd.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_msd.cpp [ 17%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_msd_molecule.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_msd_molecule.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_msd_molecule.cpp [ 17%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_nparticles_tracer_region.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_nparticles_tracer_region.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_nparticles_tracer_region.cpp [ 18%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_pair_gran_local.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_pair_gran_local.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_pair_gran_local.cpp [ 18%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_pe.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_pe.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_pe.cpp [ 18%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_pe_atom.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_pe_atom.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_pe_atom.cpp [ 18%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_pressure.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_pressure.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_pressure.cpp [ 19%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_property_atom.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_property_atom.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_property_atom.cpp [ 19%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_property_local.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_property_local.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_property_local.cpp [ 19%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_property_molecule.cpp [ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_rdf.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_rdf.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_rdf.cpp [ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_reduce.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_reduce.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_reduce.cpp [ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_reduce_region.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_reduce_region.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_reduce_region.cpp [ 21%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_rigid.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_rigid.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_rigid.cpp [ 21%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_slice.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_slice.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_slice.cpp [ 21%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_stress_atom.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_stress_atom.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_stress_atom.cpp [ 22%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_temp.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_temp.cpp.o -c /build/liggghts-3.8.0+repack1/src/compute_temp.cpp [ 22%] Building CXX object src/CMakeFiles/libliggghts.dir/contact_models.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/contact_models.cpp.o -c /build/liggghts-3.8.0+repack1/src/contact_models.cpp [ 22%] Building CXX object src/CMakeFiles/libliggghts.dir/container_base.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/container_base.cpp.o -c /build/liggghts-3.8.0+repack1/src/container_base.cpp [ 22%] Building CXX object src/CMakeFiles/libliggghts.dir/create_atoms.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/create_atoms.cpp.o -c /build/liggghts-3.8.0+repack1/src/create_atoms.cpp [ 23%] Building CXX object src/CMakeFiles/libliggghts.dir/create_box.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/create_box.cpp.o -c /build/liggghts-3.8.0+repack1/src/create_box.cpp [ 23%] Building CXX object src/CMakeFiles/libliggghts.dir/custom_value_tracker.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/custom_value_tracker.cpp.o -c /build/liggghts-3.8.0+repack1/src/custom_value_tracker.cpp [ 23%] Building CXX object src/CMakeFiles/libliggghts.dir/delete_atoms.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/delete_atoms.cpp.o -c /build/liggghts-3.8.0+repack1/src/delete_atoms.cpp [ 24%] Building CXX object src/CMakeFiles/libliggghts.dir/delete_bonds.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/delete_bonds.cpp.o -c /build/liggghts-3.8.0+repack1/src/delete_bonds.cpp [ 24%] Building CXX object src/CMakeFiles/libliggghts.dir/dihedral.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dihedral.cpp.o -c /build/liggghts-3.8.0+repack1/src/dihedral.cpp [ 24%] Building CXX object src/CMakeFiles/libliggghts.dir/dihedral_hybrid.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dihedral_hybrid.cpp.o -c /build/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp [ 25%] Building CXX object src/CMakeFiles/libliggghts.dir/displace_atoms.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/displace_atoms.cpp.o -c /build/liggghts-3.8.0+repack1/src/displace_atoms.cpp [ 25%] Building CXX object src/CMakeFiles/libliggghts.dir/domain.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/domain.cpp.o -c /build/liggghts-3.8.0+repack1/src/domain.cpp [ 25%] Building CXX object src/CMakeFiles/libliggghts.dir/dump.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump.cpp.o -c /build/liggghts-3.8.0+repack1/src/dump.cpp /build/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp: In member function 'virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)': /build/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp:352:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp:361:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp:364:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_atom_vtk.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_atom_vtk.cpp.o -c /build/liggghts-3.8.0+repack1/src/dump_atom_vtk.cpp [ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_custom.cpp.o -c /build/liggghts-3.8.0+repack1/src/dump_custom.cpp [ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o -c /build/liggghts-3.8.0+repack1/src/dump_custom_vtk.cpp [ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o -c /build/liggghts-3.8.0+repack1/src/dump_custom_vtm.cpp [ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o -c /build/liggghts-3.8.0+repack1/src/dump_decomposition_vtk.cpp [ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_euler_vtk.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_euler_vtk.cpp.o -c /build/liggghts-3.8.0+repack1/src/dump_euler_vtk.cpp [ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_image.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_image.cpp.o -c /build/liggghts-3.8.0+repack1/src/dump_image.cpp [ 28%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_local.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_local.cpp.o -c /build/liggghts-3.8.0+repack1/src/dump_local.cpp /build/liggghts-3.8.0+repack1/src/dump_atom_vtk.cpp: In member function 'void LAMMPS_NS::DumpATOMVTK::setFileCurrent()': /build/liggghts-3.8.0+repack1/src/dump_atom_vtk.cpp:367:19: warning: 's' directive writing 1 byte into a region of size between 0 and 7 [-Wformat-overflow=] sprintf(pad,"%%s%%0%d_%%d%s%%s",padflag,&bif[1]); ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from /usr/include/c++/8/stdexcept:39, from /usr/include/c++/8/array:39, from /usr/include/c++/8/tuple:39, from /usr/include/c++/8/bits/stl_map.h:63, from /usr/include/c++/8/map:61, from /usr/lib/i386-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42, from /usr/lib/i386-linux-gnu/openmpi/include/mpi.h:2684, from /build/liggghts-3.8.0+repack1/src/dump.h:49, from /build/liggghts-3.8.0+repack1/src/dump_atom_vtk.h:48, from /build/liggghts-3.8.0+repack1/src/dump_atom_vtk.cpp:40: /usr/include/i386-linux-gnu/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 11 and 28 bytes into a destination of size 16 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 28%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_local_gran.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_local_gran.cpp.o -c /build/liggghts-3.8.0+repack1/src/dump_local_gran.cpp [ 28%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_local_gran_vtk.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_local_gran_vtk.cpp.o -c /build/liggghts-3.8.0+repack1/src/dump_local_gran_vtk.cpp [ 29%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_mesh.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_mesh.cpp.o -c /build/liggghts-3.8.0+repack1/src/dump_mesh.cpp [ 29%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_mesh_stl.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_mesh_stl.cpp.o -c /build/liggghts-3.8.0+repack1/src/dump_mesh_stl.cpp [ 29%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_mesh_vtk.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_mesh_vtk.cpp.o -c /build/liggghts-3.8.0+repack1/src/dump_mesh_vtk.cpp [ 30%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_mesh_vtm.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_mesh_vtm.cpp.o -c /build/liggghts-3.8.0+repack1/src/dump_mesh_vtm.cpp [ 30%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_movie.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_movie.cpp.o -c /build/liggghts-3.8.0+repack1/src/dump_movie.cpp [ 30%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_particle.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_particle.cpp.o -c /build/liggghts-3.8.0+repack1/src/dump_particle.cpp [ 31%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_vtk.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_vtk.cpp.o -c /build/liggghts-3.8.0+repack1/src/dump_vtk.cpp [ 31%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_xyz.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_xyz.cpp.o -c /build/liggghts-3.8.0+repack1/src/dump_xyz.cpp [ 31%] Building CXX object src/CMakeFiles/libliggghts.dir/error.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/error.cpp.o -c /build/liggghts-3.8.0+repack1/src/error.cpp [ 31%] Building CXX object src/CMakeFiles/libliggghts.dir/finish.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/finish.cpp.o -c /build/liggghts-3.8.0+repack1/src/finish.cpp [ 32%] Building CXX object src/CMakeFiles/libliggghts.dir/fix.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix.cpp [ 32%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_adapt.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_adapt.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_adapt.cpp [ 32%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_addforce.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_addforce.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_addforce.cpp [ 33%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_atom.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_ave_atom.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_ave_atom.cpp [ 33%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_correlate.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_ave_correlate.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp [ 33%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_euler.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_ave_euler.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_ave_euler.cpp [ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_histo.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_ave_histo.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp [ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp [ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_ave_time.cpp [ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_aveforce.cpp /build/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()': /build/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp:520:16: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] ftruncate(fileno(fp),fileend); ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_base_liggghts.cpp [ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_box_relax.cpp /build/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp: In member function 'virtual void LAMMPS_NS::FixAveSpatial::end_of_step()': /build/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp:917:16: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] ftruncate(fileno(fp),fileend); ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)': /build/liggghts-3.8.0+repack1/src/fix_ave_time.cpp:670:16: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] ftruncate(fileno(fp),fileend); ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()': /build/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp:848:16: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result] ftruncate(fileno(fp),fileend); ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_buoyancy.cpp [ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_cfd_coupling.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_cfd_coupling.cpp [ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection.cpp [ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_impl.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_impl.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_impl.cpp [ 37%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_species.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_species.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp [ 37%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_force.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_force.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_cfd_coupling_force.cpp [ 37%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_force_implicit.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_force_implicit.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_cfd_coupling_force_implicit.cpp [ 38%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_check_timestep_gran.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_check_timestep_gran.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_check_timestep_gran.cpp [ 38%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_check_timestep_sph.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_check_timestep_sph.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp [ 38%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_contact_history.cpp /build/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp:63: warning: "BIG" redefined #define BIG 1000000. In file included from /build/liggghts-3.8.0+repack1/src/region_neighbor_list_I.h:48, from /build/liggghts-3.8.0+repack1/src/region_neighbor_list.h:183, from /build/liggghts-3.8.0+repack1/src/surface_mesh.h:54, from /build/liggghts-3.8.0+repack1/src/tri_mesh.h:47, from /build/liggghts-3.8.0+repack1/src/fix_mesh_surface.h:56, from /build/liggghts-3.8.0+repack1/src/fix_wall_gran.h:53, from /build/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp:52: /build/liggghts-3.8.0+repack1/src/domain_definitions.h:60: note: this is the location of the previous definition #define BIG 1.0e20 /build/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp: In constructor 'LAMMPS_NS::FixCfdCouplingConvectionSpecies::FixCfdCouplingConvectionSpecies(LAMMPS_NS::LAMMPS*, int, char**)': /build/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:75:37: warning: 'Source' directive writing 6 bytes into a region of size between 1 and 128 [-Wformat-overflow=] sprintf(sourceName_, "%sSource",speciesName_); ^~~~~~~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from /usr/include/c++/8/stdexcept:39, from /usr/include/c++/8/array:39, from /usr/include/c++/8/tuple:39, from /usr/include/c++/8/bits/stl_map.h:63, from /usr/include/c++/8/map:61, from /usr/lib/i386-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42, from /usr/lib/i386-linux-gnu/openmpi/include/mpi.h:2684, from /build/liggghts-3.8.0+repack1/src/pointers.h:63, from /build/liggghts-3.8.0+repack1/src/atom.h:49, from /build/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:43: /usr/include/i386-linux-gnu/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 7 and 134 bytes into a destination of size 128 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:76:37: warning: 'Flux' directive writing 4 bytes into a region of size between 1 and 128 [-Wformat-overflow=] sprintf(convectiveFluxName_,"%sFlux",speciesName_); ^~~~~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from /usr/include/c++/8/stdexcept:39, from /usr/include/c++/8/array:39, from /usr/include/c++/8/tuple:39, from /usr/include/c++/8/bits/stl_map.h:63, from /usr/include/c++/8/map:61, from /usr/lib/i386-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42, from /usr/lib/i386-linux-gnu/openmpi/include/mpi.h:2684, from /build/liggghts-3.8.0+repack1/src/pointers.h:63, from /build/liggghts-3.8.0+repack1/src/atom.h:49, from /build/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:43: /usr/include/i386-linux-gnu/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 5 and 132 bytes into a destination of size 128 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:77:37: warning: 'Capacity' directive writing 8 bytes into a region of size between 1 and 128 [-Wformat-overflow=] sprintf(capacityName_, "%sCapacity",speciesName_); ^~~~~~~~~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from /usr/include/c++/8/stdexcept:39, from /usr/include/c++/8/array:39, from /usr/include/c++/8/tuple:39, from /usr/include/c++/8/bits/stl_map.h:63, from /usr/include/c++/8/map:61, from /usr/lib/i386-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42, from /usr/lib/i386-linux-gnu/openmpi/include/mpi.h:2684, from /build/liggghts-3.8.0+repack1/src/pointers.h:63, from /build/liggghts-3.8.0+repack1/src/atom.h:49, from /build/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:43: /usr/include/i386-linux-gnu/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 9 and 136 bytes into a destination of size 128 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:78:37: warning: 'STE' directive writing 3 bytes into a region of size between 1 and 128 [-Wformat-overflow=] sprintf(steName_, "%sSTE",speciesName_); ^~~~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from /usr/include/c++/8/stdexcept:39, from /usr/include/c++/8/array:39, from /usr/include/c++/8/tuple:39, from /usr/include/c++/8/bits/stl_map.h:63, from /usr/include/c++/8/map:61, from /usr/lib/i386-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42, from /usr/lib/i386-linux-gnu/openmpi/include/mpi.h:2684, from /build/liggghts-3.8.0+repack1/src/pointers.h:63, from /build/liggghts-3.8.0+repack1/src/atom.h:49, from /build/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:43: /usr/include/i386-linux-gnu/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 4 and 131 bytes into a destination of size 128 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:79:37: warning: 'TotalFlux' directive writing 9 bytes into a region of size between 1 and 128 [-Wformat-overflow=] sprintf(totalFluxName_, "%sTotalFlux",speciesName_); ^~~~~~~~~~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from /usr/include/c++/8/stdexcept:39, from /usr/include/c++/8/array:39, from /usr/include/c++/8/tuple:39, from /usr/include/c++/8/bits/stl_map.h:63, from /usr/include/c++/8/map:61, from /usr/lib/i386-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42, from /usr/lib/i386-linux-gnu/openmpi/include/mpi.h:2684, from /build/liggghts-3.8.0+repack1/src/pointers.h:63, from /build/liggghts-3.8.0+repack1/src/atom.h:49, from /build/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:43: /usr/include/i386-linux-gnu/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 10 and 137 bytes into a destination of size 128 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:80:41: warning: 'Fluid' directive writing 5 bytes into a region of size between 1 and 128 [-Wformat-overflow=] sprintf(speciesFluidName_, "%sFluid",speciesName_); ^~~~~~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from /usr/include/c++/8/stdexcept:39, from /usr/include/c++/8/array:39, from /usr/include/c++/8/tuple:39, from /usr/include/c++/8/bits/stl_map.h:63, from /usr/include/c++/8/map:61, from /usr/lib/i386-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42, from /usr/lib/i386-linux-gnu/openmpi/include/mpi.h:2684, from /build/liggghts-3.8.0+repack1/src/pointers.h:63, from /build/liggghts-3.8.0+repack1/src/atom.h:49, from /build/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:43: /usr/include/i386-linux-gnu/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 6 and 133 bytes into a destination of size 128 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_contact_history_mesh.cpp [ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_contact_property_atom.cpp [ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_contact_property_atom_wall.cpp [ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_continuum_weighted.cpp [ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_deform.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_deform.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_deform.cpp [ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_deform_check.cpp [ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_diam_max.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_diam_max.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_diam_max.cpp [ 41%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_drag.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_drag.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_drag.cpp [ 41%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_dt_reset.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_dt_reset.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_dt_reset.cpp [ 41%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_efield.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_efield.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_efield.cpp [ 42%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_enforce2d.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_enforce2d.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_enforce2d.cpp [ 42%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_external.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_external.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_external.cpp [ 42%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_fiber_spring_simple.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_fiber_spring_simple.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_fiber_spring_simple.cpp [ 43%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_freeze.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_freeze.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_freeze.cpp [ 43%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_gravity.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_gravity.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_gravity.cpp [ 43%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_heat_gran.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_heat_gran.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_heat_gran.cpp [ 44%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_heat_gran_conduction.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_heat_gran_conduction.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_heat_gran_conduction.cpp [ 44%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_insert_pack.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_insert_pack.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_insert_pack.cpp [ 44%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_insert.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_insert.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_insert.cpp [ 45%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_insert_rate_region.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_insert_rate_region.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_insert_rate_region.cpp [ 45%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_insert_stream.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_insert_stream.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_insert_stream.cpp [ 45%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_lb_coupling_onetoone.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_lb_coupling_onetoone.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_lb_coupling_onetoone.cpp [ 45%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_lineforce.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_lineforce.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_lineforce.cpp [ 46%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_massflow_mesh.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_massflow_mesh.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_massflow_mesh.cpp [ 46%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_massflow_mesh_sieve.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_massflow_mesh_sieve.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_massflow_mesh_sieve.cpp [ 46%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_mesh.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_mesh.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_mesh.cpp [ 47%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_mesh_surface.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_mesh_surface.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_mesh_surface.cpp [ 47%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_minimize.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_minimize.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_minimize.cpp [ 47%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_momentum.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_momentum.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_momentum.cpp [ 48%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_move.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_move.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_move.cpp [ 48%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_move_mesh.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_move_mesh.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_move_mesh.cpp [ 48%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_multicontact_halfspace.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_multicontact_halfspace.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_multicontact_halfspace.cpp [ 49%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_multisphere.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_multisphere.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_multisphere.cpp [ 49%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_multisphere_break.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_multisphere_break.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_multisphere_break.cpp [ 49%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_multisphere_comm.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_multisphere_comm.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_multisphere_comm.cpp [ 50%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_neighlist_mesh.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_neighlist_mesh.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_neighlist_mesh.cpp [ 50%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_nve.cpp [ 50%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_asphere.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve_asphere.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_nve_asphere.cpp [ 50%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_asphere_base.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve_asphere_base.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_nve_asphere_base.cpp [ 51%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_asphere_noforce.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve_asphere_noforce.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_nve_asphere_noforce.cpp [ 51%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_limit.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve_limit.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_nve_limit.cpp [ 51%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_line.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve_line.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_nve_line.cpp [ 52%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_noforce.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve_noforce.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_nve_noforce.cpp [ 52%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_sph.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve_sph.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_nve_sph.cpp [ 52%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_sph_stationary.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve_sph_stationary.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_nve_sph_stationary.cpp [ 53%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_sphere.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve_sphere.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_nve_sphere.cpp [ 53%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_superquadric.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve_superquadric.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_nve_superquadric.cpp [ 53%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_particledistribution_discrete.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_particledistribution_discrete.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_particledistribution_discrete.cpp [ 54%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_planeforce.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_planeforce.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_planeforce.cpp [ 54%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_print.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_print.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_print.cpp [ 54%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_property_atom.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_property_atom.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_property_atom.cpp [ 54%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_property_atom_region_tracer.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_property_atom_region_tracer.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_property_atom_region_tracer.cpp [ 55%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_property_atom_tracer.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_property_atom_tracer.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_property_atom_tracer.cpp [ 55%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_property_atom_tracer_stream.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_property_atom_tracer_stream.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_property_atom_tracer_stream.cpp [ 55%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_property_global.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_property_global.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_property_global.cpp [ 56%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_read_restart.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_read_restart.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_read_restart.cpp [ 56%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_region_variable.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_region_variable.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_region_variable.cpp [ 56%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_respa.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_respa.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_respa.cpp [ 57%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_rigid.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_rigid.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_rigid.cpp [ 57%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_scalar_transport_equation.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_scalar_transport_equation.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_scalar_transport_equation.cpp [ 58%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_sph.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_sph.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_sph.cpp [ 58%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_setforce.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_setforce.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_setforce.cpp [ 58%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_sph_density_continuity.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_sph_density_continuity.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_sph_density_continuity.cpp [ 58%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_sph_density_corr.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_sph_density_corr.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_sph_density_corr.cpp [ 59%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_sph_density_summation.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_sph_density_summation.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_sph_density_summation.cpp [ 59%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_sph_pressure.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_sph_pressure.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_sph_pressure.cpp [ 59%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_spring.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_spring.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_spring.cpp [ 59%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_spring_rg.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_spring_rg.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_spring_rg.cpp [ 60%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_spring_self.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_spring_self.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_spring_self.cpp [ 60%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_store.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_store.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_store.cpp [ 60%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_store_force.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_store_force.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_store_force.cpp [ 61%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_store_state.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_store_state.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_store_state.cpp [ 61%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_template_multiplespheres.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_template_multiplespheres.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_template_multiplespheres.cpp [ 61%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_template_multisphere.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_template_multisphere.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_template_multisphere.cpp [ 62%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_template_sphere.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_template_sphere.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_template_sphere.cpp [ 62%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_template_superquadric.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_template_superquadric.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_template_superquadric.cpp [ 62%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_viscous.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_viscous.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_viscous.cpp [ 63%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_wall.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_wall.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_wall.cpp [ 63%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_wall_gran.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_wall_gran.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_wall_gran.cpp [ 63%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_wall_region.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_wall_region.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_wall_region.cpp [ 63%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_wall_region_sph.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_wall_region_sph.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_wall_region_sph.cpp [ 64%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_wall_sph.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_wall_sph.cpp.o -c /build/liggghts-3.8.0+repack1/src/fix_wall_sph.cpp [ 64%] Building CXX object src/CMakeFiles/libliggghts.dir/force.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/force.cpp.o -c /build/liggghts-3.8.0+repack1/src/force.cpp [ 64%] Building CXX object src/CMakeFiles/libliggghts.dir/global_properties.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/global_properties.cpp.o -c /build/liggghts-3.8.0+repack1/src/global_properties.cpp [ 65%] Building CXX object src/CMakeFiles/libliggghts.dir/granular_pair_style.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/granular_pair_style.cpp.o -c /build/liggghts-3.8.0+repack1/src/granular_pair_style.cpp [ 65%] Building CXX object src/CMakeFiles/libliggghts.dir/granular_wall.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/granular_wall.cpp.o -c /build/liggghts-3.8.0+repack1/src/granular_wall.cpp [ 65%] Building CXX object src/CMakeFiles/libliggghts.dir/group.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/group.cpp.o -c /build/liggghts-3.8.0+repack1/src/group.cpp [ 66%] Building CXX object src/CMakeFiles/libliggghts.dir/image.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/image.cpp.o -c /build/liggghts-3.8.0+repack1/src/image.cpp /build/liggghts-3.8.0+repack1/src/group.cpp: In member function 'void LAMMPS_NS::Group::read_restart(FILE*)': /build/liggghts-3.8.0+repack1/src/group.cpp:569:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&ngroup,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/group.cpp:581:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/group.cpp:585:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(names[i],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object src/CMakeFiles/libliggghts.dir/improper.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/improper.cpp.o -c /build/liggghts-3.8.0+repack1/src/improper.cpp [ 66%] Building CXX object src/CMakeFiles/libliggghts.dir/improper_hybrid.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/improper_hybrid.cpp.o -c /build/liggghts-3.8.0+repack1/src/improper_hybrid.cpp [ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/info.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/info.cpp.o -c /build/liggghts-3.8.0+repack1/src/info.cpp [ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/input.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/input.cpp.o -c /build/liggghts-3.8.0+repack1/src/input.cpp [ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o -c /build/liggghts-3.8.0+repack1/src/input_mesh_tet.cpp /build/liggghts-3.8.0+repack1/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)': /build/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:340:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:349:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:352:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o -c /build/liggghts-3.8.0+repack1/src/input_mesh_tri.cpp /build/liggghts-3.8.0+repack1/src/input.cpp: In member function 'void LAMMPS_NS::Input::shell()': /build/liggghts-3.8.0+repack1/src/input.cpp:1124:10: warning: ignoring return value of 'int chdir(const char*)', declared with attribute warn_unused_result [-Wunused-result] chdir(arg[1]); ~~~~~^~~~~~~~ /build/liggghts-3.8.0+repack1/src/input.cpp:1170:24: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) system(work); ~~~~~~^~~~~~ [ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/input_multisphere.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/input_multisphere.cpp.o -c /build/liggghts-3.8.0+repack1/src/input_multisphere.cpp [ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/integrate.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/integrate.cpp.o -c /build/liggghts-3.8.0+repack1/src/integrate.cpp [ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/irregular.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/irregular.cpp.o -c /build/liggghts-3.8.0+repack1/src/irregular.cpp [ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/kspace.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/kspace.cpp.o -c /build/liggghts-3.8.0+repack1/src/kspace.cpp [ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/lammps.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/lammps.cpp.o -c /build/liggghts-3.8.0+repack1/src/lammps.cpp [ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/lattice.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/lattice.cpp.o -c /build/liggghts-3.8.0+repack1/src/lattice.cpp [ 70%] Building CXX object src/CMakeFiles/libliggghts.dir/library.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/library.cpp.o -c /build/liggghts-3.8.0+repack1/src/library.cpp [ 70%] Building CXX object src/CMakeFiles/libliggghts.dir/library_cfd_coupling.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/library_cfd_coupling.cpp.o -c /build/liggghts-3.8.0+repack1/src/library_cfd_coupling.cpp [ 70%] Building CXX object src/CMakeFiles/libliggghts.dir/math_extra.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/math_extra.cpp.o -c /build/liggghts-3.8.0+repack1/src/math_extra.cpp [ 71%] Building CXX object src/CMakeFiles/libliggghts.dir/math_extra_liggghts_nonspherical.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/math_extra_liggghts_nonspherical.cpp.o -c /build/liggghts-3.8.0+repack1/src/math_extra_liggghts_nonspherical.cpp [ 71%] Building CXX object src/CMakeFiles/libliggghts.dir/math_extra_liggghts_superquadric.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/math_extra_liggghts_superquadric.cpp.o -c /build/liggghts-3.8.0+repack1/src/math_extra_liggghts_superquadric.cpp [ 71%] Building CXX object src/CMakeFiles/libliggghts.dir/memory.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/memory.cpp.o -c /build/liggghts-3.8.0+repack1/src/memory.cpp [ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_module.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/mesh_module.cpp.o -c /build/liggghts-3.8.0+repack1/src/mesh_module.cpp [ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_module_liquidtransfer.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/mesh_module_liquidtransfer.cpp.o -c /build/liggghts-3.8.0+repack1/src/mesh_module_liquidtransfer.cpp [ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_module_stress.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/mesh_module_stress.cpp.o -c /build/liggghts-3.8.0+repack1/src/mesh_module_stress.cpp [ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_module_stress_servo.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/mesh_module_stress_servo.cpp.o -c /build/liggghts-3.8.0+repack1/src/mesh_module_stress_servo.cpp [ 73%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_mover_linear.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/mesh_mover_linear.cpp.o -c /build/liggghts-3.8.0+repack1/src/mesh_mover_linear.cpp /build/liggghts-3.8.0+repack1/src/mesh_module_stress_servo.cpp:67: warning: "BIG" redefined #define BIG 1000000. In file included from /build/liggghts-3.8.0+repack1/src/region_neighbor_list_I.h:48, from /build/liggghts-3.8.0+repack1/src/region_neighbor_list.h:183, from /build/liggghts-3.8.0+repack1/src/surface_mesh.h:54, from /build/liggghts-3.8.0+repack1/src/tri_mesh.h:47, from /build/liggghts-3.8.0+repack1/src/mesh_module.h:44, from /build/liggghts-3.8.0+repack1/src/mesh_module_stress.h:54, from /build/liggghts-3.8.0+repack1/src/mesh_module_stress_servo.h:59, from /build/liggghts-3.8.0+repack1/src/mesh_module_stress_servo.cpp:50: /build/liggghts-3.8.0+repack1/src/domain_definitions.h:60: note: this is the location of the previous definition #define BIG 1.0e20 [ 73%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_mover_rotation.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/mesh_mover_rotation.cpp.o -c /build/liggghts-3.8.0+repack1/src/mesh_mover_rotation.cpp [ 73%] Building CXX object src/CMakeFiles/libliggghts.dir/min.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/min.cpp.o -c /build/liggghts-3.8.0+repack1/src/min.cpp [ 74%] Building CXX object src/CMakeFiles/libliggghts.dir/min_cg.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/min_cg.cpp.o -c /build/liggghts-3.8.0+repack1/src/min_cg.cpp [ 74%] Building CXX object src/CMakeFiles/libliggghts.dir/min_linesearch.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/min_linesearch.cpp.o -c /build/liggghts-3.8.0+repack1/src/min_linesearch.cpp In file included from /build/liggghts-3.8.0+repack1/src/pair_gran_base.h:63, from /build/liggghts-3.8.0+repack1/src/granular_styles.h:81, from /build/liggghts-3.8.0+repack1/src/lammps.cpp:87: /build/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::SurfacesIntersectData]': /build/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)', declared with attribute warn_unused_result [-Wunused-result] posix_memalign(&ptr, alignment, sizeof(T)); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/os_specific.h: In function 'T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::ForceData]': /build/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of 'int posix_memalign(void**, size_t, size_t)', declared with attribute warn_unused_result [-Wunused-result] [ 74%] Building CXX object src/CMakeFiles/libliggghts.dir/minimize.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/minimize.cpp.o -c /build/liggghts-3.8.0+repack1/src/minimize.cpp [ 75%] Building CXX object src/CMakeFiles/libliggghts.dir/modified_andrew.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/modified_andrew.cpp.o -c /build/liggghts-3.8.0+repack1/src/modified_andrew.cpp [ 75%] Building CXX object src/CMakeFiles/libliggghts.dir/modify.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/modify.cpp.o -c /build/liggghts-3.8.0+repack1/src/modify.cpp [ 75%] Building CXX object src/CMakeFiles/libliggghts.dir/modify_liggghts.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/modify_liggghts.cpp.o -c /build/liggghts-3.8.0+repack1/src/modify_liggghts.cpp [ 76%] Building CXX object src/CMakeFiles/libliggghts.dir/multisphere.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/multisphere.cpp.o -c /build/liggghts-3.8.0+repack1/src/multisphere.cpp [ 76%] Building CXX object src/CMakeFiles/libliggghts.dir/multisphere_parallel.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/multisphere_parallel.cpp.o -c /build/liggghts-3.8.0+repack1/src/multisphere_parallel.cpp [ 76%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_bond.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_bond.cpp.o -c /build/liggghts-3.8.0+repack1/src/neigh_bond.cpp [ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_derive.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_derive.cpp.o -c /build/liggghts-3.8.0+repack1/src/neigh_derive.cpp /build/liggghts-3.8.0+repack1/src/modify.cpp: In member function 'int LAMMPS_NS::Modify::read_restart(FILE*)': /build/liggghts-3.8.0+repack1/src/modify.cpp:1197:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nfix_restart_global,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/modify.cpp:1213:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/modify.cpp:1216:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(id_restart_global[i],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/modify.cpp:1219:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/modify.cpp:1222:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(style_restart_global[i],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/modify.cpp:1225:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/modify.cpp:1228:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(state_restart_global[i],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/modify.cpp:1236:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nfix_restart_peratom,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/modify.cpp:1252:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/modify.cpp:1255:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(id_restart_peratom[i],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/modify.cpp:1258:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/modify.cpp:1261:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(style_restart_peratom[i],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/modify.cpp:1264:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ [ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_dummy.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_dummy.cpp.o -c /build/liggghts-3.8.0+repack1/src/neigh_dummy.cpp [ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_full.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_full.cpp.o -c /build/liggghts-3.8.0+repack1/src/neigh_full.cpp [ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_gran.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_gran.cpp.o -c /build/liggghts-3.8.0+repack1/src/neigh_gran.cpp [ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o -c /build/liggghts-3.8.0+repack1/src/neigh_half_bin.cpp [ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o -c /build/liggghts-3.8.0+repack1/src/neigh_half_multi.cpp [ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_nsq.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_half_nsq.cpp.o -c /build/liggghts-3.8.0+repack1/src/neigh_half_nsq.cpp [ 79%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_list.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_list.cpp.o -c /build/liggghts-3.8.0+repack1/src/neigh_list.cpp [ 79%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_request.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_request.cpp.o -c /build/liggghts-3.8.0+repack1/src/neigh_request.cpp [ 79%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_respa.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_respa.cpp.o -c /build/liggghts-3.8.0+repack1/src/neigh_respa.cpp [ 80%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_stencil.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_stencil.cpp.o -c /build/liggghts-3.8.0+repack1/src/neigh_stencil.cpp [ 80%] Building CXX object src/CMakeFiles/libliggghts.dir/neighbor.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neighbor.cpp.o -c /build/liggghts-3.8.0+repack1/src/neighbor.cpp [ 80%] Building CXX object src/CMakeFiles/libliggghts.dir/output.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/output.cpp.o -c /build/liggghts-3.8.0+repack1/src/output.cpp [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/pair.cpp.o -c /build/liggghts-3.8.0+repack1/src/pair.cpp [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_gran.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/pair_gran.cpp.o -c /build/liggghts-3.8.0+repack1/src/pair_gran.cpp [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_gran_proxy.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/pair_gran_proxy.cpp.o -c /build/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp /build/liggghts-3.8.0+repack1/src/pair_gran.cpp: In member function 'virtual void LAMMPS_NS::PairGran::read_restart(FILE*, int, int)': /build/liggghts-3.8.0+repack1/src/pair_gran.cpp:763:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o -c /build/liggghts-3.8.0+repack1/src/pair_hybrid.cpp /build/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp: In member function 'virtual void LAMMPS_NS::PairGranProxy::read_restart_settings(FILE*, int, int)': /build/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp:116:26: warning: format '%zd' expects argument of type 'signed size_t', but argument 3 has type 'int64_t' {aka 'long long int'} [-Wformat=] fprintf(screen," original hashcode = %zd \n",selected); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~ /build/liggghts-3.8.0+repack1/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::read_restart(FILE*, int, int)': /build/liggghts-3.8.0+repack1/src/pair_hybrid.cpp:660:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/pair_hybrid.cpp:674:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/pair_hybrid.cpp:677:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp:99:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&selected, sizeof(int64_t), 1, fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o -c /build/liggghts-3.8.0+repack1/src/pair_hybrid_overlay.cpp [ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o -c /build/liggghts-3.8.0+repack1/src/pair_line_lj.cpp [ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_soft.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/pair_soft.cpp.o -c /build/liggghts-3.8.0+repack1/src/pair_soft.cpp [ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_sph.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/pair_sph.cpp.o -c /build/liggghts-3.8.0+repack1/src/pair_sph.cpp [ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o -c /build/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp /build/liggghts-3.8.0+repack1/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart(FILE*, int, int)': /build/liggghts-3.8.0+repack1/src/pair_soft.cpp:282:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/pair_soft.cpp:286:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&prefactor[i][j],sizeof(double),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/pair_soft.cpp:287:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart_settings(FILE*, int, int)': /build/liggghts-3.8.0+repack1/src/pair_soft.cpp:312:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/pair_soft.cpp:313:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/particleToInsert.cpp.o -c /build/liggghts-3.8.0+repack1/src/particleToInsert.cpp /build/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp: In member function 'virtual void LAMMPS_NS::PairSphArtviscTenscorr::read_restart(FILE*, int, int)': /build/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:300:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp: In member function 'virtual void LAMMPS_NS::PairSphArtviscTenscorr::read_restart_settings(FILE*, int, int)': /build/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:322:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&artVisc_flag,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:323:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&tensCorr_flag,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o -c /build/liggghts-3.8.0+repack1/src/particleToInsertSuperquadric.cpp [ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o -c /build/liggghts-3.8.0+repack1/src/particleToInsert_multisphere.cpp [ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/procmap.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/procmap.cpp.o -c /build/liggghts-3.8.0+repack1/src/procmap.cpp [ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/properties.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/properties.cpp.o -c /build/liggghts-3.8.0+repack1/src/properties.cpp [ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/property_registry.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/property_registry.cpp.o -c /build/liggghts-3.8.0+repack1/src/property_registry.cpp [ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/random.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/random.cpp.o -c /build/liggghts-3.8.0+repack1/src/random.cpp [ 86%] Building CXX object src/CMakeFiles/libliggghts.dir/random_mars.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/random_mars.cpp.o -c /build/liggghts-3.8.0+repack1/src/random_mars.cpp [ 86%] Building CXX object src/CMakeFiles/libliggghts.dir/random_park.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/random_park.cpp.o -c /build/liggghts-3.8.0+repack1/src/random_park.cpp [ 86%] Building CXX object src/CMakeFiles/libliggghts.dir/read_data.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/read_data.cpp.o -c /build/liggghts-3.8.0+repack1/src/read_data.cpp [ 86%] Building CXX object src/CMakeFiles/libliggghts.dir/read_dump.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/read_dump.cpp.o -c /build/liggghts-3.8.0+repack1/src/read_dump.cpp [ 87%] Building CXX object src/CMakeFiles/libliggghts.dir/read_restart.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/read_restart.cpp.o -c /build/liggghts-3.8.0+repack1/src/read_restart.cpp [ 87%] Building CXX object src/CMakeFiles/libliggghts.dir/reader.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/reader.cpp.o -c /build/liggghts-3.8.0+repack1/src/reader.cpp /build/liggghts-3.8.0+repack1/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::nread_int(int*, int, FILE*)': /build/liggghts-3.8.0+repack1/src/read_restart.cpp:863:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(buf,sizeof(int),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::nread_double(double*, int, FILE*)': /build/liggghts-3.8.0+repack1/src/read_restart.cpp:874:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(buf,sizeof(double),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::nread_char(char*, int, FILE*)': /build/liggghts-3.8.0+repack1/src/read_restart.cpp:885:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(buf,sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/read_restart.cpp: In member function 'int LAMMPS_NS::ReadRestart::read_int()': /build/liggghts-3.8.0+repack1/src/read_restart.cpp:896:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&value,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/read_restart.cpp: In member function 'double LAMMPS_NS::ReadRestart::read_double()': /build/liggghts-3.8.0+repack1/src/read_restart.cpp:911:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&value,sizeof(double),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/read_restart.cpp: In member function 'char* LAMMPS_NS::ReadRestart::read_char()': /build/liggghts-3.8.0+repack1/src/read_restart.cpp:927:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/read_restart.cpp:933:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(value,sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/read_restart.cpp: In member function 'LAMMPS_NS::bigint LAMMPS_NS::ReadRestart::read_bigint()': /build/liggghts-3.8.0+repack1/src/read_restart.cpp:948:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(&value,sizeof(bigint),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object src/CMakeFiles/libliggghts.dir/reader_native.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/reader_native.cpp.o -c /build/liggghts-3.8.0+repack1/src/reader_native.cpp [ 88%] Building CXX object src/CMakeFiles/libliggghts.dir/reader_xyz.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/reader_xyz.cpp.o -c /build/liggghts-3.8.0+repack1/src/reader_xyz.cpp [ 88%] Building CXX object src/CMakeFiles/libliggghts.dir/region.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region.cpp.o -c /build/liggghts-3.8.0+repack1/src/region.cpp [ 88%] Building CXX object src/CMakeFiles/libliggghts.dir/region_block.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_block.cpp.o -c /build/liggghts-3.8.0+repack1/src/region_block.cpp [ 89%] Building CXX object src/CMakeFiles/libliggghts.dir/region_cone.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_cone.cpp.o -c /build/liggghts-3.8.0+repack1/src/region_cone.cpp [ 89%] Building CXX object src/CMakeFiles/libliggghts.dir/region_cylinder.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_cylinder.cpp.o -c /build/liggghts-3.8.0+repack1/src/region_cylinder.cpp [ 89%] Building CXX object src/CMakeFiles/libliggghts.dir/region_intersect.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_intersect.cpp.o -c /build/liggghts-3.8.0+repack1/src/region_intersect.cpp [ 90%] Building CXX object src/CMakeFiles/libliggghts.dir/region_mesh_tet.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_mesh_tet.cpp.o -c /build/liggghts-3.8.0+repack1/src/region_mesh_tet.cpp [ 90%] Building CXX object src/CMakeFiles/libliggghts.dir/region_neighbor_list.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_neighbor_list.cpp.o -c /build/liggghts-3.8.0+repack1/src/region_neighbor_list.cpp [ 90%] Building CXX object src/CMakeFiles/libliggghts.dir/region_plane.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_plane.cpp.o -c /build/liggghts-3.8.0+repack1/src/region_plane.cpp [ 90%] Building CXX object src/CMakeFiles/libliggghts.dir/region_prism.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_prism.cpp.o -c /build/liggghts-3.8.0+repack1/src/region_prism.cpp [ 91%] Building CXX object src/CMakeFiles/libliggghts.dir/region_sphere.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_sphere.cpp.o -c /build/liggghts-3.8.0+repack1/src/region_sphere.cpp [ 91%] Building CXX object src/CMakeFiles/libliggghts.dir/region_union.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_union.cpp.o -c /build/liggghts-3.8.0+repack1/src/region_union.cpp [ 91%] Building CXX object src/CMakeFiles/libliggghts.dir/region_wedge.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_wedge.cpp.o -c /build/liggghts-3.8.0+repack1/src/region_wedge.cpp [ 92%] Building CXX object src/CMakeFiles/libliggghts.dir/replicate.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/replicate.cpp.o -c /build/liggghts-3.8.0+repack1/src/replicate.cpp [ 92%] Building CXX object src/CMakeFiles/libliggghts.dir/respa.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/respa.cpp.o -c /build/liggghts-3.8.0+repack1/src/respa.cpp [ 92%] Building CXX object src/CMakeFiles/libliggghts.dir/rotate.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/rotate.cpp.o -c /build/liggghts-3.8.0+repack1/src/rotate.cpp [ 93%] Building CXX object src/CMakeFiles/libliggghts.dir/run.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/run.cpp.o -c /build/liggghts-3.8.0+repack1/src/run.cpp [ 93%] Building CXX object src/CMakeFiles/libliggghts.dir/run_time.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/run_time.cpp.o -c /build/liggghts-3.8.0+repack1/src/run_time.cpp [ 93%] Building CXX object src/CMakeFiles/libliggghts.dir/set.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/set.cpp.o -c /build/liggghts-3.8.0+repack1/src/set.cpp [ 94%] Building CXX object src/CMakeFiles/libliggghts.dir/signal_handling.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/signal_handling.cpp.o -c /build/liggghts-3.8.0+repack1/src/signal_handling.cpp [ 94%] Building CXX object src/CMakeFiles/libliggghts.dir/sort_buffer.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/sort_buffer.cpp.o -c /build/liggghts-3.8.0+repack1/src/sort_buffer.cpp /build/liggghts-3.8.0+repack1/src/signal_handling.cpp: In function 'void LAMMPS_NS::SignalHandler::int_handler(int)': /build/liggghts-3.8.0+repack1/src/signal_handling.cpp:65:18: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result] write(STDOUT_FILENO, warning.c_str(), len); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/signal_handling.cpp:72:14: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result] write(STDERR_FILENO, error.c_str(), len); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/signal_handling.cpp:89:14: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result] write(STDOUT_FILENO, warning.c_str(), len); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/liggghts-3.8.0+repack1/src/signal_handling.cpp: In function 'void LAMMPS_NS::SignalHandler::usr1_handler(int)': /build/liggghts-3.8.0+repack1/src/signal_handling.cpp:108:10: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result] write(STDOUT_FILENO, warning.c_str(), len); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object src/CMakeFiles/libliggghts.dir/special.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/special.cpp.o -c /build/liggghts-3.8.0+repack1/src/special.cpp [ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/superquadric.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/superquadric.cpp.o -c /build/liggghts-3.8.0+repack1/src/superquadric.cpp [ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/tet_mesh.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/tet_mesh.cpp.o -c /build/liggghts-3.8.0+repack1/src/tet_mesh.cpp [ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/thermo.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/thermo.cpp.o -c /build/liggghts-3.8.0+repack1/src/thermo.cpp [ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/timer.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/timer.cpp.o -c /build/liggghts-3.8.0+repack1/src/timer.cpp [ 96%] Building CXX object src/CMakeFiles/libliggghts.dir/tri_mesh.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/tri_mesh.cpp.o -c /build/liggghts-3.8.0+repack1/src/tri_mesh.cpp [ 96%] Building CXX object src/CMakeFiles/libliggghts.dir/tri_mesh_planar.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/tri_mesh_planar.cpp.o -c /build/liggghts-3.8.0+repack1/src/tri_mesh_planar.cpp [ 96%] Building CXX object src/CMakeFiles/libliggghts.dir/universe.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/universe.cpp.o -c /build/liggghts-3.8.0+repack1/src/universe.cpp [ 97%] Building CXX object src/CMakeFiles/libliggghts.dir/update.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/update.cpp.o -c /build/liggghts-3.8.0+repack1/src/update.cpp [ 97%] Building CXX object src/CMakeFiles/libliggghts.dir/variable.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/variable.cpp.o -c /build/liggghts-3.8.0+repack1/src/variable.cpp [ 97%] Building CXX object src/CMakeFiles/libliggghts.dir/velocity.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/velocity.cpp.o -c /build/liggghts-3.8.0+repack1/src/velocity.cpp [ 98%] Building CXX object src/CMakeFiles/libliggghts.dir/verlet.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/verlet.cpp.o -c /build/liggghts-3.8.0+repack1/src/verlet.cpp /build/liggghts-3.8.0+repack1/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::next(int, char**)': /build/liggghts-3.8.0+repack1/src/variable.cpp:534:13: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result] fscanf(fp,"%d",&nextindex); ~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 98%] Building CXX object src/CMakeFiles/libliggghts.dir/write_data.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 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CMakeFiles/libliggghts.dir/special.cpp.o CMakeFiles/libliggghts.dir/superquadric.cpp.o CMakeFiles/libliggghts.dir/tet_mesh.cpp.o CMakeFiles/libliggghts.dir/thermo.cpp.o CMakeFiles/libliggghts.dir/timer.cpp.o CMakeFiles/libliggghts.dir/tri_mesh.cpp.o CMakeFiles/libliggghts.dir/tri_mesh_planar.cpp.o CMakeFiles/libliggghts.dir/universe.cpp.o CMakeFiles/libliggghts.dir/update.cpp.o CMakeFiles/libliggghts.dir/variable.cpp.o CMakeFiles/libliggghts.dir/velocity.cpp.o CMakeFiles/libliggghts.dir/verlet.cpp.o CMakeFiles/libliggghts.dir/write_data.cpp.o CMakeFiles/libliggghts.dir/write_dump.cpp.o CMakeFiles/libliggghts.dir/write_restart.cpp.o -Wl,-rpath,/usr/lib/i386-linux-gnu/hdf5/openmpi:/usr/lib/i386-linux-gnu/openmpi/lib: -lboost_mpi -lboost_serialization -ljpeg /usr/lib/i386-linux-gnu/libvtkChartsCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkInfovisCore-6.3.so.6.3.0 -lfreetype -lz /usr/lib/i386-linux-gnu/libvtkViewsContext2D-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkViewsCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkInteractionWidgets-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersHybrid-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkImagingGeneral-6.3.so.6.3.0 -ljpeg -lpng -ltiff /usr/lib/i386-linux-gnu/libvtkInteractionStyle-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkRenderingAnnotation-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkImagingColor-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkRenderingVolume-6.3.so.6.3.0 -lexpat /usr/lib/i386-linux-gnu/libvtkRenderingOpenGL-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOParallelXML-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOMPIParallel-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOParallel-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersParallel-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIONetCDF-6.3.so.6.3.0 -lnetcdf_c++ -lnetcdf /usr/lib/i386-linux-gnu/hdf5/openmpi/libhdf5.so -lsz -ldl -lm /usr/lib/i386-linux-gnu/openmpi/lib/libmpi.so /usr/lib/i386-linux-gnu/libvtkexoIIc-6.3.so.6.3.0 -ljsoncpp /usr/lib/i386-linux-gnu/libvtkParallelMPI-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkRenderingContext2D-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkImagingSources-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkRenderingFreeType-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkftgl-6.3.so.6.3.0 -lfreetype /usr/lib/i386-linux-gnu/libvtkImagingHybrid-6.3.so.6.3.0 -lGL -lGLU -lSM -lICE -lX11 -lXext -lXt /usr/lib/i386-linux-gnu/libvtkIOImage-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkDICOMParser-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkmetaio-6.3.so.6.3.0 -lz /usr/lib/i386-linux-gnu/libvtkIOXML-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOGeometry-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOXMLParser-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkRenderingCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonColor-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersExtraction-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersStatistics-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkImagingFourier-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkImagingCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkalglib-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersGeometry-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersModeling-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersSources-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersGeneral-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonComputationalGeometry-6.3.so.6.3.0 -lnetcdf_c++ -lnetcdf /usr/lib/i386-linux-gnu/libvtkParallelCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOLegacy-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonExecutionModel-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonDataModel-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonMisc-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonSystem-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtksys-6.3.so.6.3.0 -ldl /usr/lib/i386-linux-gnu/libvtkCommonTransforms-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonMath-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonCore-6.3.so.6.3.0 cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/cmake -E cmake_symlink_library libliggghts.so.3.8.0 libliggghts.so.3 libliggghts.so make[3]: Leaving directory '/build/liggghts-3.8.0+repack1/debian/build' [ 99%] Built target libliggghts make -f src/CMakeFiles/liggghts.dir/build.make src/CMakeFiles/liggghts.dir/depend make[3]: Entering directory '/build/liggghts-3.8.0+repack1/debian/build' cd /build/liggghts-3.8.0+repack1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/liggghts-3.8.0+repack1 /build/liggghts-3.8.0+repack1/src /build/liggghts-3.8.0+repack1/debian/build /build/liggghts-3.8.0+repack1/debian/build/src /build/liggghts-3.8.0+repack1/debian/build/src/CMakeFiles/liggghts.dir/DependInfo.cmake --color= Scanning dependencies of target liggghts make[3]: Leaving directory '/build/liggghts-3.8.0+repack1/debian/build' make -f src/CMakeFiles/liggghts.dir/build.make src/CMakeFiles/liggghts.dir/build make[3]: Entering directory '/build/liggghts-3.8.0+repack1/debian/build' [ 99%] Building CXX object src/CMakeFiles/liggghts.dir/main.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -o CMakeFiles/liggghts.dir/main.cpp.o -c /build/liggghts-3.8.0+repack1/src/main.cpp [100%] Linking CXX executable liggghts cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/liggghts.dir/link.txt --verbose=1 /usr/bin/mpicxx -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/liggghts.dir/main.cpp.o -o liggghts -Wl,-rpath,/build/liggghts-3.8.0+repack1/debian/build/src:/usr/lib/i386-linux-gnu/hdf5/openmpi:/usr/lib/i386-linux-gnu/openmpi/lib: libliggghts.so.3.8.0 -lboost_mpi -lboost_serialization -ljpeg /usr/lib/i386-linux-gnu/libvtkChartsCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkInfovisCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkViewsContext2D-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkRenderingContext2D-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkViewsCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkInteractionWidgets-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersHybrid-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkImagingGeneral-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkImagingSources-6.3.so.6.3.0 -lpng -ltiff /usr/lib/i386-linux-gnu/libvtkInteractionStyle-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkRenderingAnnotation-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkRenderingFreeType-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkftgl-6.3.so.6.3.0 -lfreetype /usr/lib/i386-linux-gnu/libvtkImagingColor-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkRenderingVolume-6.3.so.6.3.0 -lexpat /usr/lib/i386-linux-gnu/libvtkRenderingOpenGL-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkImagingHybrid-6.3.so.6.3.0 -lGL -lGLU -lSM -lICE -lX11 -lXext -lXt /usr/lib/i386-linux-gnu/libvtkIOParallelXML-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOMPIParallel-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOParallel-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOImage-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkDICOMParser-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkmetaio-6.3.so.6.3.0 -lz /usr/lib/i386-linux-gnu/libvtkIOXML-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOGeometry-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOXMLParser-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersParallel-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkRenderingCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonColor-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersExtraction-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersStatistics-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkImagingFourier-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkImagingCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkalglib-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersGeometry-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersModeling-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersSources-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersGeneral-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonComputationalGeometry-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIONetCDF-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/hdf5/openmpi/libhdf5.so -lsz -ldl -lm /usr/lib/i386-linux-gnu/openmpi/lib/libmpi.so /usr/lib/i386-linux-gnu/libvtkexoIIc-6.3.so.6.3.0 -lnetcdf_c++ -lnetcdf -ljsoncpp /usr/lib/i386-linux-gnu/libvtkParallelMPI-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkParallelCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOLegacy-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonExecutionModel-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonDataModel-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonMisc-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonSystem-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtksys-6.3.so.6.3.0 -ldl /usr/lib/i386-linux-gnu/libvtkCommonTransforms-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonMath-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonCore-6.3.so.6.3.0 make[3]: Leaving directory '/build/liggghts-3.8.0+repack1/debian/build' [100%] Built target liggghts make[2]: Leaving directory '/build/liggghts-3.8.0+repack1/debian/build' /usr/bin/cmake -E cmake_progress_start /build/liggghts-3.8.0+repack1/debian/build/CMakeFiles 0 make[1]: Leaving directory '/build/liggghts-3.8.0+repack1/debian/build' debian/rules override_dh_auto_test make[1]: Entering directory '/build/liggghts-3.8.0+repack1' mkdir test cp -r examples/LIGGGHTS/Tutorials_public/heatTransfer_1/* test/ cd test; mpirun -np 2 --allow-run-as-root --oversubscribe /build/liggghts-3.8.0+repack1/debian/build/src/liggghts < in.heatGran -------------------------------------------------------------------------- [[49232,1],0]: A high-performance Open MPI point-to-point messaging module was unable to find any relevant network interfaces: Module: OpenFabrics (openib) Host: i-capture-the-hostname Another transport will be used instead, although this may result in lower performance. NOTE: You can disable this warning by setting the MCA parameter btl_base_warn_component_unused to 0. -------------------------------------------------------------------------- LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2020-07-16-10:18:11 by pbuilder2, git commit unknown) Created orthogonal box = (-0.05 -0.05 0) to (0.05 0.05 0.15) 1 by 1 by 2 MPI processor grid Fix particledistribution/discrete (id pdd1): distribution based on mass%: pts1: d=8.000000e-03 (max. bounding sphere) mass%=100.000000% Fix particledistribution/discrete (id pdd1): distribution based on number%: pts1: d=8.000000e-03 (max. bounding sphere) number%=100.000000% Setting up run at Thu Jul 16 10:28:07 2020 INFO: Resetting random generator for region bc INFO: Particle insertion ins: inserting every 0 steps Memory usage per processor = 4.29039 Mbytes Step Atoms KinEng rke heattran Volume 0 0 0 0 0 0.0015 insertion: proc 1 at 0 % insertion: proc 1 at 10 % insertion: proc 1 at 20 % insertion: proc 1 at 30 % insertion: proc 1 at 40 % insertion: proc 1 at 50 % insertion: proc 1 at 60 % insertion: proc 0 at 0 % insertion: proc 0 at 10 % insertion: proc 0 at 20 % insertion: proc 0 at 30 % insertion: proc 0 at 40 % insertion: proc 0 at 50 % insertion: proc 0 at 60 % insertion: proc 1 at 70 % insertion: proc 1 at 80 % insertion: proc 1 at 90 % insertion: proc 0 at 70 % insertion: proc 0 at 80 % insertion: proc 0 at 90 % insertion: proc 1 at 100 % insertion: proc 0 at 100 % INFO: Particle insertion ins: inserted 889 particle templates (mass 1.906603e+00) at step 1 - a total of 889 particle templates (mass 1.906603e+00) inserted so far. 1 889 0.0858673 0 5719.8098 0.0015 Loop time of 0.026716 on 2 procs for 1 steps with 889 atoms, finish time Thu Jul 16 10:28:07 2020 Pair time (%) = 3.569e-05 (0.13359) Neigh time (%) = 0.000576625 (2.15835) Comm time (%) = 0.000252022 (0.943336) Outpt time (%) = 4.73895e-05 (0.177382) Other time (%) = 0.0258043 (96.5873) Nlocal: 444.5 ave 446 max 443 min Histogram: 1 0 0 0 0 0 0 0 0 1 Nghost: 53.5 ave 55 max 52 min Histogram: 1 0 0 0 0 0 0 0 0 1 Neighs: 677.5 ave 692 max 663 min Histogram: 1 0 0 0 0 0 0 0 0 1 Total # of neighbors = 1355 Ave neighs/atom = 1.52418 Neighbor list builds = 1 Dangerous builds = 0 Setting up run at Thu Jul 16 10:28:07 2020 Memory usage per processor = 7.99957 Mbytes Step Atoms KinEng rke heattran Volume 1 889 0.0858673 0 5719.8098 0.0015 1000 889 0.24513315 0.00028749395 5719.8098 0.0015 2000 889 0.41448052 0.0011292267 5719.8098 0.0015 3000 889 0.499185 0.0020564748 5719.8098 0.0015 [i-capture-the-hostname:19713] 1 more process has sent help message help-mpi-btl-base.txt / btl:no-nics [i-capture-the-hostname:19713] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages 4000 889 0.31640464 0.0039072055 5719.8098 0.0015 5000 889 0.025728568 0.0031537134 5719.8098 0.0015 6000 889 0.0066287745 0.0017750201 5719.8098 0.0015 7000 889 0.0056667073 0.0011144462 5719.8098 0.0015 8000 889 0.0035005057 0.00068869832 5719.8098 0.0015 9000 889 0.0018745735 0.00041781236 5719.8098 0.0015 10000 889 0.0011201936 0.00026314438 5719.8098 0.0015 11000 889 0.00027955703 0.00014277644 5719.8098 0.0015 12000 889 0.00020839365 8.2854619e-05 5719.8098 0.0015 13000 889 0.00010373299 4.1740613e-05 5719.8098 0.0015 14000 889 7.7899463e-05 2.4554134e-05 5719.8098 0.0015 15000 889 3.2923682e-05 1.3281979e-05 5719.8098 0.0015 16000 889 6.6184852e-05 1.4268392e-05 5719.8098 0.0015 17000 889 3.7335974e-05 1.3508451e-05 5719.8098 0.0015 18000 889 2.0608503e-05 8.4041706e-06 5719.8098 0.0015 19000 889 7.1847902e-06 5.7384807e-06 5719.8098 0.0015 20000 889 2.5428841e-06 2.021589e-06 5719.8098 0.0015 Loop time of 38.0859 on 2 procs for 19999 steps with 889 atoms, finish time Thu Jul 16 10:28:45 2020 Pair time (%) = 10.4245 (27.3711) Neigh time (%) = 0.139659 (0.366695) Comm time (%) = 3.28511 (8.62553) Outpt time (%) = 2.56931 (6.7461) Other time (%) = 21.6673 (56.8906) Nlocal: 444.5 ave 889 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 1 Nghost: 0 ave 0 max 0 min Histogram: 2 0 0 0 0 0 0 0 0 0 Neighs: 2065.5 ave 4131 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 1 Total # of neighbors = 4131 Ave neighs/atom = 4.64679 Neighbor list builds = 185 Dangerous builds = 0 Setting atom values ... 442 settings made for property/atom Setting up run at Thu Jul 16 10:28:45 2020 Memory usage per processor = 8.29655 Mbytes Step Atoms KinEng rke heattran Volume 20000 889 2.5428841e-06 2.021589e-06 10459.51 0.0015 21000 889 1.9257119e-06 1.2934252e-06 10459.51 0.0015 22000 889 3.7991044e-06 2.0352124e-06 10459.51 0.0015 23000 889 1.4392438e-06 5.2313397e-07 10459.51 0.0015 24000 889 7.5794639e-08 5.7974655e-08 10459.51 0.0015 25000 889 3.049746e-08 3.4603698e-08 10459.51 0.0015 26000 889 1.6574568e-08 2.7215214e-08 10459.51 0.0015 27000 889 1.3286437e-08 2.5285541e-08 10459.51 0.0015 28000 889 1.0254209e-08 2.44844e-08 10459.51 0.0015 29000 889 9.1797047e-09 2.4058208e-08 10459.51 0.0015 30000 889 7.6739311e-09 2.378023e-08 10459.51 0.0015 31000 889 6.6534473e-09 2.3641498e-08 10459.51 0.0015 32000 889 6.7589199e-09 2.3653054e-08 10459.51 0.0015 33000 889 6.9472168e-09 2.3659452e-08 10459.51 0.0015 34000 889 6.7000439e-09 2.3608357e-08 10459.51 0.0015 35000 889 4.2905245e-09 1.8379828e-08 10459.51 0.0015 36000 889 4.128673e-09 1.84131e-08 10459.51 0.0015 37000 889 4.1334721e-09 1.8407536e-08 10459.51 0.0015 38000 889 4.1591349e-09 1.8402885e-08 10459.51 0.0015 39000 889 4.1469527e-09 1.8399964e-08 10459.51 0.0015 40000 889 4.0906805e-09 1.8397163e-08 10459.51 0.0015 41000 889 4.0449881e-09 1.8394287e-08 10459.51 0.0015 42000 889 4.018687e-09 1.8353281e-08 10459.51 0.0015 43000 889 4.0370812e-09 1.8353962e-08 10459.51 0.0015 44000 889 4.0383656e-09 1.8353375e-08 10459.51 0.0015 45000 889 4.0225523e-09 1.8352136e-08 10459.51 0.0015 46000 889 4.0089046e-09 1.8351356e-08 10459.51 0.0015 47000 889 3.9894799e-09 1.8343766e-08 10459.51 0.0015 48000 889 3.9966529e-09 1.8327843e-08 10459.51 0.0015 49000 889 3.9981496e-09 1.8327955e-08 10459.51 0.0015 50000 889 2.0362479e-09 1.7303876e-08 10459.51 0.0015 Loop time of 56.0394 on 2 procs for 30000 steps with 889 atoms, finish time Thu Jul 16 10:29:41 2020 Pair time (%) = 14.6945 (26.2217) Neigh time (%) = 0.000710187 (0.0012673) Comm time (%) = 0.101842 (0.181732) Outpt time (%) = 5.14607 (9.18295) Other time (%) = 36.0963 (64.4124) Nlocal: 444.5 ave 889 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 1 Nghost: 0 ave 0 max 0 min Histogram: 2 0 0 0 0 0 0 0 0 0 Neighs: 2067 ave 4134 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 1 Total # of neighbors = 4134 Ave neighs/atom = 4.65017 Neighbor list builds = 1 Dangerous builds = 0 rm -rf test mkdir test cp -r examples/LIGGGHTS/Tutorials_public/heatTransfer_1/* test/ cd test; /build/liggghts-3.8.0+repack1/debian/build/src/liggghts < in.heatGran -------------------------------------------------------------------------- [[56208,1],0]: A high-performance Open MPI point-to-point messaging module was unable to find any relevant network interfaces: Module: OpenFabrics (openib) Host: i-capture-the-hostname Another transport will be used instead, although this may result in lower performance. NOTE: You can disable this warning by setting the MCA parameter btl_base_warn_component_unused to 0. -------------------------------------------------------------------------- LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2020-07-16-10:18:11 by pbuilder2, git commit unknown) Created orthogonal box = (-0.05 -0.05 0) to (0.05 0.05 0.15) 1 by 1 by 1 MPI processor grid Fix particledistribution/discrete (id pdd1): distribution based on mass%: pts1: d=8.000000e-03 (max. bounding sphere) mass%=100.000000% Fix particledistribution/discrete (id pdd1): distribution based on number%: pts1: d=8.000000e-03 (max. bounding sphere) number%=100.000000% Setting up run at Thu Jul 16 10:29:45 2020 INFO: Resetting random generator for region bc INFO: Particle insertion ins: inserting every 0 steps Memory usage per processor = 4.32462 Mbytes Step Atoms KinEng rke heattran Volume 0 0 0 0 0 0.0015 insertion: proc 0 at 0 % insertion: proc 0 at 10 % insertion: proc 0 at 20 % insertion: proc 0 at 30 % insertion: proc 0 at 40 % insertion: proc 0 at 50 % insertion: proc 0 at 60 % insertion: proc 0 at 70 % insertion: proc 0 at 80 % insertion: proc 0 at 90 % INFO: Particle insertion ins: inserted 890 particle templates (mass 1.908748e+00) at step 1 - a total of 890 particle templates (mass 1.908748e+00) inserted so far. 1 890 0.085963889 0 5726.2438 0.0015 Loop time of 0.0390665 on 1 procs for 1 steps with 890 atoms, finish time Thu Jul 16 10:29:45 2020 Pair time (%) = 7.5444e-05 (0.193117) Neigh time (%) = 0.00115587 (2.95872) Comm time (%) = 1.9311e-05 (0.0494311) Outpt time (%) = 6.8801e-05 (0.176112) Other time (%) = 0.0377471 (96.6226) Nlocal: 890 ave 890 max 890 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1377 ave 1377 max 1377 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1377 Ave neighs/atom = 1.54719 Neighbor list builds = 1 Dangerous builds = 0 Setting up run at Thu Jul 16 10:29:45 2020 Memory usage per processor = 8.0355 Mbytes Step Atoms KinEng rke heattran Volume 1 890 0.085963889 0 5726.2438 0.0015 1000 890 0.24827796 0.00022041163 5726.2438 0.0015 2000 890 0.4310526 0.0010095459 5726.2438 0.0015 3000 890 0.49526899 0.0024747088 5726.2438 0.0015 4000 890 0.31586477 0.0035252599 5726.2438 0.0015 5000 890 0.027567868 0.0029390073 5726.2438 0.0015 6000 890 0.0070080863 0.0017166381 5726.2438 0.0015 7000 890 0.0063163052 0.0011226272 5726.2438 0.0015 8000 890 0.0040206928 0.0006726963 5726.2438 0.0015 9000 890 0.0018452901 0.00036234204 5726.2438 0.0015 10000 890 0.00052494335 0.00020133765 5726.2438 0.0015 11000 890 0.00025900712 0.00010357046 5726.2438 0.0015 12000 890 0.00017252985 5.2790964e-05 5726.2438 0.0015 13000 890 4.2791523e-05 2.5244582e-05 5726.2438 0.0015 14000 890 2.0363235e-05 1.1782226e-05 5726.2438 0.0015 15000 890 1.5281252e-05 6.1595438e-06 5726.2438 0.0015 16000 890 7.5062631e-06 4.3767286e-06 5726.2438 0.0015 17000 890 6.7817828e-06 3.6528572e-06 5726.2438 0.0015 18000 890 1.115964e-05 5.0891708e-06 5726.2438 0.0015 19000 890 8.6317273e-06 5.1602134e-06 5726.2438 0.0015 20000 890 3.5313037e-06 2.2976158e-06 5726.2438 0.0015 Loop time of 29.4139 on 1 procs for 19999 steps with 890 atoms, finish time Thu Jul 16 10:30:15 2020 Pair time (%) = 16.3596 (55.6188) Neigh time (%) = 0.216931 (0.737511) Comm time (%) = 0.070083 (0.238265) Outpt time (%) = 3.94805 (13.4224) Other time (%) = 8.81917 (29.983) Nlocal: 890 ave 890 max 890 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 4120 ave 4120 max 4120 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4120 Ave neighs/atom = 4.62921 Neighbor list builds = 173 Dangerous builds = 0 Setting atom values ... 445 settings made for property/atom Setting up run at Thu Jul 16 10:30:15 2020 Memory usage per processor = 8.32421 Mbytes Step Atoms KinEng rke heattran Volume 20000 890 3.5313037e-06 2.2976158e-06 10498.114 0.0015 21000 890 1.1979669e-05 4.0541649e-06 10498.114 0.0015 22000 890 3.3463741e-07 2.1674336e-06 10498.114 0.0015 23000 890 1.3330373e-06 7.6303228e-07 10498.114 0.0015 24000 890 5.0254545e-07 1.9788497e-07 10498.114 0.0015 25000 890 6.0666403e-08 7.0969289e-08 10498.114 0.0015 26000 890 3.1886402e-08 5.6050555e-08 10498.114 0.0015 27000 890 2.4393559e-08 4.6496646e-08 10498.114 0.0015 28000 890 2.252459e-08 4.5678304e-08 10498.114 0.0015 29000 890 2.2232892e-08 4.5629376e-08 10498.114 0.0015 30000 890 2.1284676e-08 4.536967e-08 10498.114 0.0015 31000 890 2.0442834e-08 4.5286768e-08 10498.114 0.0015 32000 890 2.0130207e-08 4.5227608e-08 10498.114 0.0015 33000 890 1.9724468e-08 4.4995e-08 10498.114 0.0015 34000 890 1.6383493e-08 4.0348354e-08 10498.114 0.0015 35000 890 4.9660309e-10 3.0148123e-08 10498.114 0.0015 36000 890 1.0654053e-08 3.1163812e-08 10498.114 0.0015 37000 890 1.0463521e-08 3.0052014e-08 10498.114 0.0015 38000 890 1.0984101e-08 3.0136974e-08 10498.114 0.0015 39000 890 1.0966033e-08 3.0136152e-08 10498.114 0.0015 40000 890 1.0914668e-08 3.0130391e-08 10498.114 0.0015 41000 890 1.0779189e-08 3.0129744e-08 10498.114 0.0015 42000 890 1.0748963e-08 3.0126845e-08 10498.114 0.0015 43000 890 1.0736294e-08 3.0126123e-08 10498.114 0.0015 44000 890 1.0727961e-08 3.012572e-08 10498.114 0.0015 45000 890 1.0723576e-08 3.0125276e-08 10498.114 0.0015 46000 890 1.0696942e-08 3.0060693e-08 10498.114 0.0015 47000 890 9.2120451e-09 2.6969464e-08 10498.114 0.0015 48000 890 9.2079131e-09 2.6866978e-08 10498.114 0.0015 49000 890 5.774488e-09 2.5126969e-08 10498.114 0.0015 50000 890 5.8549287e-09 2.0714114e-08 10498.114 0.0015 Loop time of 57.2931 on 1 procs for 30000 steps with 890 atoms, finish time Thu Jul 16 10:31:12 2020 Pair time (%) = 30.6074 (53.4225) Neigh time (%) = 0.00377361 (0.0065865) Comm time (%) = 0.0964592 (0.168361) Outpt time (%) = 10.3236 (18.0188) Other time (%) = 16.2619 (28.3837) Nlocal: 890 ave 890 max 890 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 4117 ave 4117 max 4117 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 4117 Ave neighs/atom = 4.62584 Neighbor list builds = 3 Dangerous builds = 0 rm -rf test make[1]: Leaving directory '/build/liggghts-3.8.0+repack1' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --buildsystem=cmake --builddirectory=/build/liggghts-3.8.0+repack1/debian/build dh_testroot -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_prep -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_auto_install -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build cd debian/build && make -j10 install DESTDIR=/build/liggghts-3.8.0\+repack1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/liggghts-3.8.0+repack1/debian/build' /usr/bin/cmake -S/build/liggghts-3.8.0+repack1 -B/build/liggghts-3.8.0+repack1/debian/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/liggghts-3.8.0+repack1/debian/build/CMakeFiles /build/liggghts-3.8.0+repack1/debian/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/liggghts-3.8.0+repack1/debian/build' make -f src/CMakeFiles/GenerateHeaders.dir/build.make src/CMakeFiles/GenerateHeaders.dir/depend make[3]: Entering directory '/build/liggghts-3.8.0+repack1/debian/build' cd /build/liggghts-3.8.0+repack1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/liggghts-3.8.0+repack1 /build/liggghts-3.8.0+repack1/src /build/liggghts-3.8.0+repack1/debian/build /build/liggghts-3.8.0+repack1/debian/build/src /build/liggghts-3.8.0+repack1/debian/build/src/CMakeFiles/GenerateHeaders.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/liggghts-3.8.0+repack1/debian/build' make -f src/CMakeFiles/GenerateHeaders.dir/build.make src/CMakeFiles/GenerateHeaders.dir/build make[3]: Entering directory '/build/liggghts-3.8.0+repack1/debian/build' cd /build/liggghts-3.8.0+repack1/src && sh Make.sh style cd /build/liggghts-3.8.0+repack1/src && sh Make.sh models Creating list of contact models completed. make[3]: Leaving directory '/build/liggghts-3.8.0+repack1/debian/build' [ 0%] Built target GenerateHeaders make -f src/CMakeFiles/libliggghts.dir/build.make src/CMakeFiles/libliggghts.dir/depend make[3]: Entering directory '/build/liggghts-3.8.0+repack1/debian/build' cd /build/liggghts-3.8.0+repack1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/liggghts-3.8.0+repack1 /build/liggghts-3.8.0+repack1/src /build/liggghts-3.8.0+repack1/debian/build /build/liggghts-3.8.0+repack1/debian/build/src /build/liggghts-3.8.0+repack1/debian/build/src/CMakeFiles/libliggghts.dir/DependInfo.cmake --color= Scanning dependencies of target libliggghts make[3]: Leaving directory '/build/liggghts-3.8.0+repack1/debian/build' make -f src/CMakeFiles/libliggghts.dir/build.make src/CMakeFiles/libliggghts.dir/build make[3]: Entering directory '/build/liggghts-3.8.0+repack1/debian/build' [ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/universe.cpp.o cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/i386-linux-gnu -I/usr/include/hdf5/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include/openmpi -I/usr/lib/i386-linux-gnu/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/build/liggghts-3.8.0+repack1 -I/build/liggghts-3.8.0+repack1/src -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/universe.cpp.o -c /build/liggghts-3.8.0+repack1/src/universe.cpp [ 0%] Linking CXX shared library libliggghts.so cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/libliggghts.dir/link.txt --verbose=1 /usr/bin/mpicxx -fPIC -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libliggghts.so.3 -o libliggghts.so.3.8.0 CMakeFiles/libliggghts.dir/angle.cpp.o CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o CMakeFiles/libliggghts.dir/atom.cpp.o CMakeFiles/libliggghts.dir/atom_map.cpp.o CMakeFiles/libliggghts.dir/atom_vec.cpp.o CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o 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/usr/lib/i386-linux-gnu/libvtkImagingCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkalglib-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersGeometry-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersModeling-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersSources-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersGeneral-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonComputationalGeometry-6.3.so.6.3.0 -lnetcdf_c++ -lnetcdf /usr/lib/i386-linux-gnu/libvtkParallelCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOLegacy-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonExecutionModel-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonDataModel-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonMisc-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonSystem-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtksys-6.3.so.6.3.0 -ldl /usr/lib/i386-linux-gnu/libvtkCommonTransforms-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonMath-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonCore-6.3.so.6.3.0 cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/cmake -E cmake_symlink_library libliggghts.so.3.8.0 libliggghts.so.3 libliggghts.so make[3]: Leaving directory '/build/liggghts-3.8.0+repack1/debian/build' [ 99%] Built target libliggghts make -f src/CMakeFiles/liggghts.dir/build.make src/CMakeFiles/liggghts.dir/depend make[3]: Entering directory '/build/liggghts-3.8.0+repack1/debian/build' cd /build/liggghts-3.8.0+repack1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/liggghts-3.8.0+repack1 /build/liggghts-3.8.0+repack1/src /build/liggghts-3.8.0+repack1/debian/build /build/liggghts-3.8.0+repack1/debian/build/src /build/liggghts-3.8.0+repack1/debian/build/src/CMakeFiles/liggghts.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/liggghts-3.8.0+repack1/debian/build' make -f src/CMakeFiles/liggghts.dir/build.make src/CMakeFiles/liggghts.dir/build make[3]: Entering directory '/build/liggghts-3.8.0+repack1/debian/build' [100%] Linking CXX executable liggghts cd /build/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/liggghts.dir/link.txt --verbose=1 /usr/bin/mpicxx -g -O2 -ffile-prefix-map=/build/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/liggghts.dir/main.cpp.o -o liggghts -Wl,-rpath,/build/liggghts-3.8.0+repack1/debian/build/src:/usr/lib/i386-linux-gnu/hdf5/openmpi:/usr/lib/i386-linux-gnu/openmpi/lib: libliggghts.so.3.8.0 -lboost_mpi -lboost_serialization -ljpeg /usr/lib/i386-linux-gnu/libvtkChartsCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkInfovisCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkViewsContext2D-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkRenderingContext2D-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkViewsCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkInteractionWidgets-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersHybrid-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkImagingGeneral-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkImagingSources-6.3.so.6.3.0 -lpng -ltiff /usr/lib/i386-linux-gnu/libvtkInteractionStyle-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkRenderingAnnotation-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkRenderingFreeType-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkftgl-6.3.so.6.3.0 -lfreetype /usr/lib/i386-linux-gnu/libvtkImagingColor-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkRenderingVolume-6.3.so.6.3.0 -lexpat /usr/lib/i386-linux-gnu/libvtkRenderingOpenGL-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkImagingHybrid-6.3.so.6.3.0 -lGL -lGLU -lSM -lICE -lX11 -lXext -lXt /usr/lib/i386-linux-gnu/libvtkIOParallelXML-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOMPIParallel-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOParallel-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOImage-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkDICOMParser-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkmetaio-6.3.so.6.3.0 -lz /usr/lib/i386-linux-gnu/libvtkIOXML-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOGeometry-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOXMLParser-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersParallel-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkRenderingCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonColor-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersExtraction-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersStatistics-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkImagingFourier-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkImagingCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkalglib-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersGeometry-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersModeling-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersSources-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersGeneral-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkFiltersCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonComputationalGeometry-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIONetCDF-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/hdf5/openmpi/libhdf5.so -lsz -ldl -lm /usr/lib/i386-linux-gnu/openmpi/lib/libmpi.so /usr/lib/i386-linux-gnu/libvtkexoIIc-6.3.so.6.3.0 -lnetcdf_c++ -lnetcdf -ljsoncpp /usr/lib/i386-linux-gnu/libvtkParallelMPI-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkParallelCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOLegacy-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkIOCore-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonExecutionModel-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonDataModel-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonMisc-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonSystem-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtksys-6.3.so.6.3.0 -ldl /usr/lib/i386-linux-gnu/libvtkCommonTransforms-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonMath-6.3.so.6.3.0 /usr/lib/i386-linux-gnu/libvtkCommonCore-6.3.so.6.3.0 make[3]: Leaving directory '/build/liggghts-3.8.0+repack1/debian/build' [100%] Built target liggghts make[2]: Leaving directory '/build/liggghts-3.8.0+repack1/debian/build' /usr/bin/cmake -E cmake_progress_start /build/liggghts-3.8.0+repack1/debian/build/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/liggghts-3.8.0+repack1/debian/build' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/liggghts-3.8.0+repack1/debian/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/lib/i386-linux-gnu/libliggghts.so.3.8.0 -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/lib/i386-linux-gnu/libliggghts.so.3 -- Set runtime path of "/build/liggghts-3.8.0+repack1/debian/tmp/usr/lib/i386-linux-gnu/libliggghts.so.3.8.0" to "" -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/lib/i386-linux-gnu/libliggghts.so -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/bin/liggghts -- Set runtime path of "/build/liggghts-3.8.0+repack1/debian/tmp/usr/bin/liggghts" to "" -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/abstract_mesh.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/accelerator_cuda.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/accelerator_omp.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/angle.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/angle_hybrid.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/associative_pointer_array.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/associative_pointer_array_I.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_masks.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_atomic.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_charge.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_convexhull.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_ellipsoid.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_full.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_hybrid.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_line.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_molecular.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_sph.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_sph_var.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_sphere.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_superquadric.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_tri.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/bond.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/bond_harmonic.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/bond_hybrid.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/bounding_box.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cfd_datacoupling.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cfd_datacoupling_file.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cfd_datacoupling_mpi.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cfd_datacoupling_simple.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cfd_regionmodel.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cfd_regionmodel_none.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/change_box.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/citeme.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cohesion_model_base.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cohesion_model_easo_capillary_viscous.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cohesion_model_sjkr.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cohesion_model_sjkr2.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cohesion_model_washino_capillary_viscous.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/comm.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/comm_I.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_atom_molecule.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_bond_local.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_centro_atom.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_cluster_atom.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_cna_atom.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_com.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_com_molecule.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_contact_atom.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_contact_atom_gran.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_coord_atom.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_displace_atom.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_erotate.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_erotate_asphere.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_erotate_multisphere.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_erotate_sphere.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_erotate_sphere_atom.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_erotate_superquadric.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_group_group.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_gyration.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_gyration_molecule.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_inertia_molecule.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_ke.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_ke_atom.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_ke_multisphere.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_msd.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_msd_molecule.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_nparticles_tracer_region.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_pair_gran_local.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_pe.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_pe_atom.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_pressure.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_property_atom.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_property_local.h -- 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/build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/normal_model_hooke_stiffness.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/normal_model_luding.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/normal_model_thornton_ning.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/os_specific.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/output.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/pack.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/pair.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/pair_gran.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/pair_gran_base.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/pair_gran_proxy.h -- Installing: 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/build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/sph_kernel_spiky2D.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/sph_kernel_wendland.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/sph_kernel_wendland2D.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/sph_kernels.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/string_liggghts.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/suffix.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/superquadric.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/surface_mesh.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/surface_mesh_I.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/surface_mesh_feature_remove.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/surface_mesh_feature_remove_I.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/surface_model_base.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/surface_model_default.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/surface_model_multicontact.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/surface_model_superquadric.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tangential_model_base.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tangential_model_history.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tangential_model_luding_tn.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tangential_model_no_history.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tet_mesh.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tet_mesh_I.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/thermo.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/timer.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tracking_mesh.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tracking_mesh_I.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tri_line.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tri_mesh.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tri_mesh_I.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tri_mesh_I_superquadric.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tri_mesh_deform.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tri_mesh_planar.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tri_mesh_planar_I.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/universe.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/update.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/utils.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/variable.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/vector_container.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/vector_liggghts.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/velocity.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/verlet.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/version.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/volume_mesh.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/volume_mesh_I.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/write_data.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/write_dump.h -- Installing: /build/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/write_restart.h make[1]: Leaving directory '/build/liggghts-3.8.0+repack1/debian/build' dh_install -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_installdocs -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_installchangelogs -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build debian/rules override_dh_installexamples make[1]: Entering directory '/build/liggghts-3.8.0+repack1' dh_installexamples find /build/liggghts-3.8.0+repack1/debian/ -name ".gitignore" | xargs rm -f make[1]: Leaving directory '/build/liggghts-3.8.0+repack1' dh_installman -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_installinit -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_lintian -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_perl -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_link -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_strip_nondeterminism -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_compress -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_fixperms -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_missing -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_strip -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_makeshlibs -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_shlibdeps -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_installdeb -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_gencontrol -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dpkg-gencontrol: warning: Depends field of package libliggghts-dev: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package liggghts-doc: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dh_builddeb -O--buildsystem=cmake -O--builddirectory=/build/liggghts-3.8.0\+repack1/debian/build dpkg-deb: building package 'libliggghts3' in '../libliggghts3_3.8.0+repack1-4_i386.deb'. dpkg-deb: building package 'liggghts-dbgsym' in '../liggghts-dbgsym_3.8.0+repack1-4_i386.deb'. dpkg-deb: building package 'libliggghts-dev' in '../libliggghts-dev_3.8.0+repack1-4_i386.deb'. dpkg-deb: building package 'liggghts-doc' in '../liggghts-doc_3.8.0+repack1-4_all.deb'. dpkg-deb: building package 'libliggghts3-dbgsym' in '../libliggghts3-dbgsym_3.8.0+repack1-4_i386.deb'. dpkg-deb: building package 'liggghts' in '../liggghts_3.8.0+repack1-4_i386.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../liggghts_3.8.0+repack1-4_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: user script /srv/workspace/pbuilder/17450/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/17450/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/17450 and its subdirectories I: Current time: Thu Jul 16 10:34:18 +14 2020 I: pbuilder-time-stamp: 1594845258