I: pbuilder: network access will be disabled during build I: Current time: Fri Jul 17 11:09:55 +14 2020 I: pbuilder-time-stamp: 1594933795 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [lucy_1.20-1.dsc] I: copying [./lucy_1.20.orig.tar.gz] I: copying [./lucy_1.20-1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Thu Sep 6 22:59:45 2018 +14 gpgv: using RSA key 84C1977A89E7EFED3E5CA62E2FD8BEDAC020EED1 gpgv: issuer "moeller@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./lucy_1.20-1.dsc dpkg-source: info: extracting lucy in lucy-1.20 dpkg-source: info: unpacking lucy_1.20.orig.tar.gz dpkg-source: info: unpacking lucy_1.20-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying helpingMakefile.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/40176/tmp/hooks/D01_modify_environment starting disorder-fs debug: Running on profitbricks-build16-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/40176/tmp/hooks/D01_modify_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 11) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19231 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 11); however: Package debhelper is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbsd0{a} libcroco3{a} libelf1{a} libfile-stripnondeterminism-perl{a} libglib2.0-0{a} libicu63{a} libmagic-mgc{a} libmagic1{a} libncurses6{a} libpipeline1{a} libsigsegv2{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libglib2.0-data libgpm2 libltdl-dev libmail-sendmail-perl lynx shared-mime-info wget xdg-user-dirs 0 packages upgraded, 33 newly installed, 0 to remove and 0 not upgraded. Need to get 19.3 MB of archives. After unpacking 70.3 MB will be used. Writing extended state information... Get: 1 http://cdn-fastly.deb.debian.org/debian buster/main i386 libbsd0 i386 0.9.1-2 [104 kB] Get: 2 http://cdn-fastly.deb.debian.org/debian buster/main i386 bsdmainutils i386 11.1.2+b1 [193 kB] Get: 3 http://cdn-fastly.deb.debian.org/debian buster/main i386 libuchardet0 i386 0.0.6-3 [65.2 kB] Get: 4 http://cdn-fastly.deb.debian.org/debian buster/main i386 groff-base i386 1.22.4-3 [935 kB] Get: 5 http://cdn-fastly.deb.debian.org/debian buster/main i386 libpipeline1 i386 1.5.1-2 [33.3 kB] Get: 6 http://cdn-fastly.deb.debian.org/debian buster/main i386 man-db i386 2.8.5-2 [1284 kB] Get: 7 http://cdn-fastly.deb.debian.org/debian buster/main i386 sensible-utils all 0.0.12 [15.8 kB] Get: 8 http://cdn-fastly.deb.debian.org/debian buster/main i386 libmagic-mgc i386 1:5.35-4 [242 kB] Get: 9 http://cdn-fastly.deb.debian.org/debian buster/main i386 libmagic1 i386 1:5.35-4 [124 kB] Get: 10 http://cdn-fastly.deb.debian.org/debian buster/main i386 file i386 1:5.35-4 [66.3 kB] Get: 11 http://cdn-fastly.deb.debian.org/debian buster/main i386 gettext-base i386 0.19.8.1-9 [124 kB] Get: 12 http://cdn-fastly.deb.debian.org/debian buster/main i386 libsigsegv2 i386 2.12-2 [33.2 kB] Get: 13 http://cdn-fastly.deb.debian.org/debian buster/main i386 m4 i386 1.4.18-2 [205 kB] Get: 14 http://cdn-fastly.deb.debian.org/debian buster/main i386 autoconf all 2.69-11 [341 kB] Get: 15 http://cdn-fastly.deb.debian.org/debian buster/main i386 autotools-dev all 20180224.1 [77.0 kB] Get: 16 http://cdn-fastly.deb.debian.org/debian buster/main i386 automake all 1:1.16.1-4 [771 kB] Get: 17 http://cdn-fastly.deb.debian.org/debian buster/main i386 autopoint all 0.19.8.1-9 [434 kB] Get: 18 http://cdn-fastly.deb.debian.org/debian buster/main i386 libtool all 2.4.6-9 [547 kB] Get: 19 http://cdn-fastly.deb.debian.org/debian buster/main i386 dh-autoreconf all 19 [16.9 kB] Get: 20 http://cdn-fastly.deb.debian.org/debian buster/main i386 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 21 http://cdn-fastly.deb.debian.org/debian buster/main i386 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 22 http://cdn-fastly.deb.debian.org/debian buster/main i386 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 23 http://cdn-fastly.deb.debian.org/debian buster/main i386 libelf1 i386 0.176-1.1 [166 kB] Get: 24 http://cdn-fastly.deb.debian.org/debian buster/main i386 dwz i386 0.12-3 [81.4 kB] Get: 25 http://cdn-fastly.deb.debian.org/debian buster/main i386 libglib2.0-0 i386 2.58.3-2 [1333 kB] Get: 26 http://cdn-fastly.deb.debian.org/debian buster/main i386 libicu63 i386 63.1-6 [8443 kB] Get: 27 http://cdn-fastly.deb.debian.org/debian buster/main i386 libxml2 i386 2.9.4+dfsg1-7+b3 [721 kB] Get: 28 http://cdn-fastly.deb.debian.org/debian buster/main i386 libcroco3 i386 0.6.12-3 [151 kB] Get: 29 http://cdn-fastly.deb.debian.org/debian buster/main i386 libncurses6 i386 6.1+20181013-2 [109 kB] Get: 30 http://cdn-fastly.deb.debian.org/debian buster/main i386 gettext i386 0.19.8.1-9 [1314 kB] Get: 31 http://cdn-fastly.deb.debian.org/debian buster/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 32 http://cdn-fastly.deb.debian.org/debian buster/main i386 po-debconf all 1.0.21 [248 kB] Get: 33 http://cdn-fastly.deb.debian.org/debian buster/main i386 debhelper all 12.1.1 [1016 kB] Fetched 19.3 MB in 4s (4671 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19231 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_i386.deb ... Unpacking libbsd0:i386 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_i386.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../02-libuchardet0_0.0.6-3_i386.deb ... Unpacking libuchardet0:i386 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_i386.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../04-libpipeline1_1.5.1-2_i386.deb ... Unpacking libpipeline1:i386 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_i386.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../06-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../07-libmagic-mgc_1%3a5.35-4_i386.deb ... Unpacking libmagic-mgc (1:5.35-4) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../08-libmagic1_1%3a5.35-4_i386.deb ... Unpacking libmagic1:i386 (1:5.35-4) ... Selecting previously unselected package file. Preparing to unpack .../09-file_1%3a5.35-4_i386.deb ... Unpacking file (1:5.35-4) ... Selecting previously unselected package gettext-base. Preparing to unpack .../10-gettext-base_0.19.8.1-9_i386.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libsigsegv2:i386. Preparing to unpack .../11-libsigsegv2_2.12-2_i386.deb ... Unpacking libsigsegv2:i386 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.18-2_i386.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../15-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... 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Preparing to unpack .../28-libncurses6_6.1+20181013-2_i386.deb ... Unpacking libncurses6:i386 (6.1+20181013-2) ... Selecting previously unselected package gettext. Preparing to unpack .../29-gettext_0.19.8.1-9_i386.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../30-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../31-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../32-debhelper_12.1.1_all.deb ... Unpacking debhelper (12.1.1) ... Setting up libpipeline1:i386 (1.5.1-2) ... Setting up libmagic-mgc (1:5.35-4) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:i386 (2.58.3-2) ... No schema files found: doing nothing. Setting up libmagic1:i386 (1:5.35-4) ... Setting up gettext-base (0.19.8.1-9) ... Setting up file (1:5.35-4) ... Setting up libicu63:i386 (63.1-6) ... Setting up autotools-dev (20180224.1) ... Setting up libncurses6:i386 (6.1+20181013-2) ... Setting up libsigsegv2:i386 (2.12-2) ... Setting up autopoint (0.19.8.1-9) ... Setting up sensible-utils (0.0.12) ... Setting up libuchardet0:i386 (0.0.6-3) ... Setting up libbsd0:i386 (0.9.1-2) ... Setting up libelf1:i386 (0.176-1.1) ... Setting up libxml2:i386 (2.9.4+dfsg1-7+b3) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libtool (2.4.6-9) ... Setting up m4 (1.4.18-2) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:i386 (0.6.12-3) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-9) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up po-debconf (1.0.21) ... Setting up debhelper (12.1.1) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Processing triggers for libc-bin (2.28-10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). The following additional packages will be installed: libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl The following NEW packages will be installed: libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl usrmerge 0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. Need to get 59.5 kB of archives. After this operation, 182 kB of additional disk space will be used. Get:1 http://cdn-fastly.deb.debian.org/debian buster/main i386 libnumber-compare-perl all 0.03-1 [7642 B] Get:2 http://cdn-fastly.deb.debian.org/debian buster/main i386 libtext-glob-perl all 0.10-1 [8362 B] Get:3 http://cdn-fastly.deb.debian.org/debian buster/main i386 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:4 http://cdn-fastly.deb.debian.org/debian buster/main i386 usrmerge all 21 [12.8 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 59.5 kB in 0s (122 kB/s) Selecting previously unselected package libnumber-compare-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21275 files and directories currently installed.) Preparing to unpack .../libnumber-compare-perl_0.03-1_all.deb ... Unpacking libnumber-compare-perl (0.03-1) ... Selecting previously unselected package libtext-glob-perl. Preparing to unpack .../libtext-glob-perl_0.10-1_all.deb ... Unpacking libtext-glob-perl (0.10-1) ... Selecting previously unselected package libfile-find-rule-perl. Preparing to unpack .../libfile-find-rule-perl_0.34-1_all.deb ... Unpacking libfile-find-rule-perl (0.34-1) ... Selecting previously unselected package usrmerge. Preparing to unpack .../archives/usrmerge_21_all.deb ... Unpacking usrmerge (21) ... Setting up libtext-glob-perl (0.10-1) ... Setting up libnumber-compare-perl (0.03-1) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up usrmerge (21) ... The system has been successfully converted. Processing triggers for man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. I: Building the package I: Running cd /build/lucy-1.20/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package lucy dpkg-buildpackage: info: source version 1.20-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Steffen Moeller dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean dh_auto_clean make -j18 clean make[1]: Entering directory '/build/lucy-1.20' rm -f lucy.o qual_trim.o abi.o vector.o splice.o poly.o lucy make[1]: Leaving directory '/build/lucy-1.20' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/lucy.substvars debian/files rm -fr -- debian/lucy/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build dh build dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j18 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/lucy-1.20' cc -g -O2 -ffile-prefix-map=/build/lucy-1.20=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o lucy.o lucy.c cc -g -O2 -ffile-prefix-map=/build/lucy-1.20=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o qual_trim.o qual_trim.c cc -g -O2 -ffile-prefix-map=/build/lucy-1.20=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o abi.o abi.c cc -g -O2 -ffile-prefix-map=/build/lucy-1.20=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vector.o vector.c cc -g -O2 -ffile-prefix-map=/build/lucy-1.20=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o splice.o splice.c cc -g -O2 -ffile-prefix-map=/build/lucy-1.20=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c -o poly.o poly.c done! qual_trim.c:10:1: warning: "/*" within comment [-Wcomment] /* qual_trim.c - Quality trimming algorithm which determines a "clean" qual_trim.c:11:1: warning: "/*" within comment [-Wcomment] /* range for a sequence based on its phred quality values. qual_trim.c:12:1: warning: "/*" within comment [-Wcomment] /* qual_trim.c:13:1: warning: "/*" within comment [-Wcomment] /* Written by Michael Holmes, 4/13/99. qual_trim.c:14:1: warning: "/*" within comment [-Wcomment] /* qual_trim.c:15:1: warning: "/*" within comment [-Wcomment] /* 1/31/2000, Michael Holmes -- Added default_windows(). qual_trim.c:16:1: warning: "/*" within comment [-Wcomment] /* 2/15/2000, Michael Holmes -- Added bracket_clean_range() and qual_trim.c:17:1: warning: "/*" within comment [-Wcomment] /* set_bracket(). qual_trim.c:18:1: warning: "/*" within comment [-Wcomment] /* 2/18/2000, Michael Holmes -- Minor change to test-mode output only. qual_trim.c:19:1: warning: "/*" within comment [-Wcomment] /* qual_trim.c:20:1: warning: "/*" within comment [-Wcomment] /* Copyright (C) 1999, 2000, The Institute for Genomic Research. All rights qual_trim.c:21:1: warning: "/*" within comment [-Wcomment] /* reserved. qual_trim.c:22:1: warning: "/*" within comment [-Wcomment] /* qual_trim.c:23:1: warning: "/*" within comment [-Wcomment] /* Note: phred quality values are based on the log (base 10) of the qual_trim.c:24:1: warning: "/*" within comment [-Wcomment] /* probability that the corresponding base call is in error: qual_trim.c:25:1: warning: "/*" within comment [-Wcomment] /* abi.c:24:8: warning: type defaults to 'int' in declaration of 'condition' [-Wimplicit-int] static condition[]={ ^~~~~~~~~ qual_trim.c:26:1: warning: "/*" within comment [-Wcomment] /* Q = -10 log(P_error) qual_trim.c:27:1: warning: "/*" within comment [-Wcomment] /* qual_trim.c:28:1: warning: "/*" within comment [-Wcomment] /* Thanks to Granger Sutton for valuable suggestions. qual_trim.c:29:1: warning: "/*" within comment [-Wcomment] /* qual_trim.c:30:1: warning: "/*" within comment [-Wcomment] /* The main functions of interest to external code (such as lucy) are qual_trim.c:31:1: warning: "/*" within comment [-Wcomment] /* default_windows() and quality_trim(). The grim() function emulates the qual_trim.c:32:1: warning: "/*" within comment [-Wcomment] /* interface that was used by the old quality trimmimg algorithm (grim), qual_trim.c:33:1: warning: "/*" within comment [-Wcomment] /* but it is not called by lucy. The main() function is compiled only if qual_trim.c:34:1: warning: "/*" within comment [-Wcomment] /* TEST_THIS_CODE is #defined. qual_trim.c:35:1: warning: "/*" within comment [-Wcomment] /* qual_trim.c:36:1: warning: "/*" within comment [-Wcomment] /* The calling hierarchy is: qual_trim.c:37:1: warning: "/*" within comment [-Wcomment] /* qual_trim.c:38:1: warning: "/*" within comment [-Wcomment] /* main() qual_trim.c:39:1: warning: "/*" within comment [-Wcomment] /* grim() qual_trim.c:40:1: warning: "/*" within comment [-Wcomment] /* default_windows() qual_trim.c:41:1: warning: "/*" within comment [-Wcomment] /* quality_trim() qual_trim.c:42:1: warning: "/*" within comment [-Wcomment] /* bracket_clean_range() qual_trim.c:43:1: warning: "/*" within comment [-Wcomment] /* multi_window_trim() qual_trim.c:44:1: warning: "/*" within comment [-Wcomment] /* window_trim() qual_trim.c:45:1: warning: "/*" within comment [-Wcomment] /* multi_window_trim() [recursive call] qual_trim.c:46:1: warning: "/*" within comment [-Wcomment] /* average_error_trim() qual_trim.c:47:1: warning: "/*" within comment [-Wcomment] /* qual_trim.c:48:1: warning: "/*" within comment [-Wcomment] /**************************************************************************/ abi.c: In function 'abi_code': abi.c:70:15: warning: implicit declaration of function 'random' [-Wimplicit-function-declaration] case 5: tmp=random()%2 ? 2 : 0; break; ^~~~~~ poly.c: In function 'poly_at_left': poly.c:22:9: warning: implicit declaration of function 'abi_code' [-Wimplicit-function-declaration] if (abi_code(*seq)==T) { ^~~~~~~~ splice.c: In function 'splice_align_left': splice.c:53:12: warning: type defaults to 'int' in declaration of 'left' [-Wimplicit-int] register left, top, direc, score, i, j; ^~~~ abi.c:82:5: warning: implicit declaration of function 'giveup' [-Wimplicit-function-declaration] giveup("how can other cases happen in tag_code?"); ^~~~~~ splice.c:53:18: warning: type defaults to 'int' in declaration of 'top' [-Wimplicit-int] register left, top, direc, score, i, j; ^~~ splice.c:53:23: warning: type defaults to 'int' in declaration of 'direc' [-Wimplicit-int] register left, top, direc, score, i, j; ^~~~~ splice.c:53:30: warning: type defaults to 'int' in declaration of 'score' [-Wimplicit-int] register left, top, direc, score, i, j; ^~~~~ splice.c:53:37: warning: type defaults to 'int' in declaration of 'i' [-Wimplicit-int] register left, top, direc, score, i, j; ^ splice.c:53:40: warning: type defaults to 'int' in declaration of 'j' [-Wimplicit-int] register left, top, direc, score, i, j; ^ splice.c:68:31: warning: array subscript has type 'char' [-Wchar-subscripts] Score(0,0)=max_score=match[*a][*b]; ^ splice.c:68:35: warning: array subscript has type 'char' [-Wchar-subscripts] Score(0,0)=max_score=match[*a][*b]; ^ splice.c:75:18: warning: array subscript has type 'char' [-Wchar-subscripts] score=match[a[i]][*b]; ^ splice.c:75:24: warning: array subscript has type 'char' [-Wchar-subscripts] score=match[a[i]][*b]; ^ splice.c:76:37: warning: array subscript has type 'char' [-Wchar-subscripts] left=Score(i-1,0)+left_penalty[Direc(i-1,0)]; ^ splice.c:90:18: warning: array subscript has type 'char' [-Wchar-subscripts] score=match[*a][b[j]]; ^ splice.c:90:22: warning: array subscript has type 'char' [-Wchar-subscripts] score=match[*a][b[j]]; ^ splice.c:91:35: warning: array subscript has type 'char' [-Wchar-subscripts] top=Score(0,j-1)+top_penalty[Direc(0,j-1)]; ^ splice.c:107:16: warning: array subscript has type 'char' [-Wchar-subscripts] score+=match[a[i]][b[j]]; ^ splice.c:107:22: warning: array subscript has type 'char' [-Wchar-subscripts] score+=match[a[i]][b[j]]; ^ splice.c:110:15: warning: array subscript has type 'char' [-Wchar-subscripts] score=match[a[i]][b[j]]; ^ splice.c:110:21: warning: array subscript has type 'char' [-Wchar-subscripts] score=match[a[i]][b[j]]; ^ splice.c:113:30: warning: array subscript has type 'char' [-Wchar-subscripts] top=Score(i,j-1)+top_penalty[Direc(i,j-1)]; ^ splice.c:114:32: warning: array subscript has type 'char' [-Wchar-subscripts] left=Score(i-1,j)+left_penalty[Direc(i-1,j)]; ^ abi.c: In function 'abi_align': abi.c:195:16: warning: array subscript has type 'char' [-Wchar-subscripts] if (badness[a[i]][b[j]]) { ^ abi.c:195:22: warning: array subscript has type 'char' [-Wchar-subscripts] if (badness[a[i]][b[j]]) { ^ splice.c:139:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] while (direc=Direc(i,j)) ^~~~~ abi.c:221:16: warning: array subscript has type 'char' [-Wchar-subscripts] if (badness[a[i]][b[j]]) { ^ abi.c:221:22: warning: array subscript has type 'char' [-Wchar-subscripts] if (badness[a[i]][b[j]]) { ^ splice.c: In function 'splice_align_right': splice.c:176:12: warning: type defaults to 'int' in declaration of 'left' [-Wimplicit-int] register left, top, direc, score, i, j; ^~~~ splice.c:176:18: warning: type defaults to 'int' in declaration of 'top' [-Wimplicit-int] register left, top, direc, score, i, j; ^~~ splice.c:176:23: warning: type defaults to 'int' in declaration of 'direc' [-Wimplicit-int] register left, top, direc, score, i, j; ^~~~~ abi.c:226:37: warning: array subscript has type 'char' [-Wchar-subscripts] l=span && j>=width-max_i || j>height/2) ~~~~~~~~^~~~~~~~~~~~~~~~~ abi.c:289:16: warning: array subscript has type 'char' [-Wchar-subscripts] if (badness[a[i]][b[j]]) { ^ abi.c:289:22: warning: array subscript has type 'char' [-Wchar-subscripts] if (badness[a[i]][b[j]]) { ^ abi.c:294:30: warning: array subscript has type 'char' [-Wchar-subscripts] l>=0 && r>=0 && badness[a[l]][b[r]]==0 ^ abi.c:294:36: warning: array subscript has type 'char' [-Wchar-subscripts] l>=0 && r>=0 && badness[a[l]][b[r]]==0 ^ abi.c:301:21: warning: array subscript has type 'char' [-Wchar-subscripts] if ((count+=badness[a[l]][b[r]])=0 && r>=0 && badness[a[l]][b[r]]==0 ^ abi.c:313:36: warning: array subscript has type 'char' [-Wchar-subscripts] l>=0 && r>=0 && badness[a[l]][b[r]]==0 ^ abi.c:320:21: warning: array subscript has type 'char' [-Wchar-subscripts] if ((count+=badness[a[l]][b[r]])=0 && r>=0 && badness[a[l]][b[r]]==0 ^ abi.c:334:36: warning: array subscript has type 'char' [-Wchar-subscripts] l>=0 && r>=0 && badness[a[l]][b[r]]==0 ^ abi.c:341:21: warning: array subscript has type 'char' [-Wchar-subscripts] if ((count+=badness[a[l]][b[r]])left), &(ptr->right)); ^~~~~~~~~~~~ lucy.c:669:5: warning: implicit declaration of function 'prepare_abi_mask' [-Wimplicit-function-declaration] prepare_abi_mask(); ^~~~~~~~~~~~~~~~ lucy.c:713:2: warning: implicit declaration of function 'abi_align' [-Wimplicit-function-declaration] abi_align(phred_seq, ptr->len, abi_seq, bases, &left, &right); ^~~~~~~~~ lucy.c:891:7: warning: implicit declaration of function 'poly_at_left' [-Wimplicit-function-declaration] left=poly_at_left(&phred_seq[seqs[i].left], ^~~~~~~~~~~~ lucy.c:894:8: warning: implicit declaration of function 'poly_at_right' [-Wimplicit-function-declaration] right=poly_at_right(&phred_seq[seqs[i].right], ^~~~~~~~~~~~~ lucy.c:934:5: warning: implicit declaration of function 'construct_vector_tags' [-Wimplicit-function-declaration] construct_vector_tags(vec_seq, bases); ^~~~~~~~~~~~~~~~~~~~~ lucy.c:947:4: warning: implicit declaration of function 'match_vector_tags' [-Wimplicit-function-declaration] j=match_vector_tags(phred_seq+seqs[i].left, bases); ^~~~~~~~~~~~~~~~~ lucy.c:959:5: warning: implicit declaration of function 'destroy_vector_tags' [-Wimplicit-function-declaration] destroy_vector_tags(); ^~~~~~~~~~~~~~~~~~~ lucy.c:631:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(buf, BUFFER_LENGTH, qul_file); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rm -f lucy cc -g -O2 -ffile-prefix-map=/build/lucy-1.20=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -o lucy lucy.o qual_trim.o abi.o vector.o splice.o poly.o -lpthread make[1]: Leaving directory '/build/lucy-1.20' dh_auto_test create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep rm -f -- debian/lucy.substvars rm -fr -- debian/.debhelper/generated/lucy/ debian/lucy/ debian/tmp/ dh_auto_install install -d /build/lucy-1.20/debian/lucy dh_install install -d debian/lucy/usr/bin cp --reflink=auto -a ./lucy debian/lucy/usr/bin/ install -d debian/.debhelper/generated/lucy dh_installdocs install -d debian/lucy/usr/share/doc/lucy cp --reflink=auto -a ./debian/README.Debian debian/lucy/usr/share/doc/lucy cp --reflink=auto -a ./debian/README.source debian/lucy/usr/share/doc/lucy cp --reflink=auto -a ./README.FIRST debian/lucy/usr/share/doc/lucy cp --reflink=auto -a ./HISTORY debian/lucy/usr/share/doc/lucy chown -R 0:0 debian/lucy/usr/share/doc chmod -R u\+rw,go=rX debian/lucy/usr/share/doc install -p -m0644 debian/README.Debian debian/lucy/usr/share/doc/lucy/README.Debian install -p -m0644 debian/copyright debian/lucy/usr/share/doc/lucy/copyright dh_installchangelogs install -p -m0644 debian/changelog debian/lucy/usr/share/doc/lucy/changelog.Debian mv debian/lucy/usr/share/doc/lucy/HISTORY debian/lucy/usr/share/doc/lucy/changelog chmod 0644 -- debian/lucy/usr/share/doc/lucy/changelog chown 0:0 -- debian/lucy/usr/share/doc/lucy/changelog dh_installman install -d debian/lucy/usr/share/man/man1/ install -p -m0644 ./lucy.1 debian/lucy/usr/share/man/man1/lucy.1 man -l --recode UTF-8 ./debian/lucy/usr/share/man/man1/lucy.1 > debian/lucy/usr/share/man/man1/lucy.1.dh-new mv debian/lucy/usr/share/man/man1/lucy.1.dh-new debian/lucy/usr/share/man/man1/lucy.1 chmod 0644 -- debian/lucy/usr/share/man/man1/lucy.1 dh_perl dh_link dh_strip_nondeterminism dh_compress cd debian/lucy chmod a-x usr/share/doc/lucy/README.FIRST usr/share/doc/lucy/changelog usr/share/doc/lucy/changelog.Debian usr/share/man/man1/lucy.1 gzip -9nf usr/share/doc/lucy/README.FIRST usr/share/doc/lucy/changelog usr/share/doc/lucy/changelog.Debian usr/share/man/man1/lucy.1 cd '/build/lucy-1.20' dh_fixperms find debian/lucy -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/lucy ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/lucy/usr/share/doc -type f -a -true -a ! -regex 'debian/lucy/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/lucy/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/lucy/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/lucy -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/lucy/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing dh_strip install -d debian/.debhelper/lucy/dbgsym-root/usr/lib/debug/.build-id/c2 objcopy --only-keep-debug --compress-debug-sections debian/lucy/usr/bin/lucy debian/.debhelper/lucy/dbgsym-root/usr/lib/debug/.build-id/c2/1c33678c674bc5778ead4b1f53ca9f4efec60f.debug chmod 0644 -- debian/.debhelper/lucy/dbgsym-root/usr/lib/debug/.build-id/c2/1c33678c674bc5778ead4b1f53ca9f4efec60f.debug chown 0:0 -- debian/.debhelper/lucy/dbgsym-root/usr/lib/debug/.build-id/c2/1c33678c674bc5778ead4b1f53ca9f4efec60f.debug strip --remove-section=.comment --remove-section=.note debian/lucy/usr/bin/lucy objcopy --add-gnu-debuglink debian/.debhelper/lucy/dbgsym-root/usr/lib/debug/.build-id/c2/1c33678c674bc5778ead4b1f53ca9f4efec60f.debug debian/lucy/usr/bin/lucy install -d debian/.debhelper/lucy/dbgsym-root/usr/share/doc ln -s lucy debian/.debhelper/lucy/dbgsym-root/usr/share/doc/lucy-dbgsym dh_makeshlibs rm -f debian/lucy/DEBIAN/shlibs dh_shlibdeps install -d debian/lucy/DEBIAN dpkg-shlibdeps -Tdebian/lucy.substvars debian/lucy/usr/bin/lucy dh_installdeb dh_gencontrol echo misc:Depends= >> debian/lucy.substvars echo misc:Pre-Depends= >> debian/lucy.substvars install -d debian/.debhelper/lucy/dbgsym-root/DEBIAN dpkg-gencontrol -plucy -ldebian/changelog -Tdebian/lucy.substvars -Pdebian/.debhelper/lucy/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=lucy-dbgsym "-DDepends=lucy (= \${binary:Version})" "-DDescription=debug symbols for lucy" -DBuild-Ids=c21c33678c674bc5778ead4b1f53ca9f4efec60f -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/lucy/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/lucy/dbgsym-root/DEBIAN/control dpkg-gencontrol -plucy -ldebian/changelog -Tdebian/lucy.substvars -Pdebian/lucy -UMulti-Arch chmod 0644 -- debian/lucy/DEBIAN/control chown 0:0 -- debian/lucy/DEBIAN/control dh_md5sums cd debian/lucy >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/lucy/DEBIAN/md5sums chown 0:0 -- debian/lucy/DEBIAN/md5sums cd debian/.debhelper/lucy/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/lucy/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/lucy/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --build debian/lucy .. dpkg-deb --build debian/.debhelper/lucy/dbgsym-root .. dpkg-deb: building package 'lucy' in '../lucy_1.20-1_i386.deb'. dpkg-deb: building package 'lucy-dbgsym' in '../lucy-dbgsym_1.20-1_i386.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../lucy_1.20-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: user script /srv/workspace/pbuilder/40176/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/40176/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/40176 and its subdirectories I: Current time: Fri Jul 17 11:10:15 +14 2020 I: pbuilder-time-stamp: 1594933815