I: pbuilder: network access will be disabled during build
I: Current time: Tue Nov 26 02:00:53 -12 2024
I: pbuilder-time-stamp: 1732629653
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/experimental-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [openstructure_2.9.0-1~exp1.dsc]
I: copying [./openstructure_2.9.0.orig.tar.xz]
I: copying [./openstructure_2.9.0-1~exp1.debian.tar.xz]
I: Extracting source
gpgv: Signature made Mon Nov 25 08:39:28 2024 
gpgv:                using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287
gpgv:                issuer "merkys@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./openstructure_2.9.0-1~exp1.dsc: no acceptable signature found
dpkg-source: info: extracting openstructure in openstructure-2.9.0
dpkg-source: info: unpacking openstructure_2.9.0.orig.tar.xz
dpkg-source: info: unpacking openstructure_2.9.0-1~exp1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying python-dist-packages.patch
dpkg-source: info: applying fix-quotes-in-ENV.patch
dpkg-source: info: applying skip-network-tests.patch
dpkg-source: info: applying add-python3-shebangs.patch
dpkg-source: info: applying ost_config.patch
dpkg-source: info: applying skip-dssp-tests.patch
dpkg-source: info: applying skip-testSpearmanCorrel.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/3745438/tmp/hooks/D02_print_environment starting
I: set
  BUILDDIR='/build/reproducible-path'
  BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
  BUILDUSERNAME='pbuilder1'
  BUILD_ARCH='amd64'
  DEBIAN_FRONTEND='noninteractive'
  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 '
  DISTRIBUTION='experimental'
  HOME='/root'
  HOST_ARCH='amd64'
  IFS=' 	
  '
  INVOCATION_ID='7b3805dd7e1e46acab04c0ed5b962bb7'
  LANG='C'
  LANGUAGE='en_US:en'
  LC_ALL='C'
  MAIL='/var/mail/root'
  OPTIND='1'
  PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
  PBCURRENTCOMMANDLINEOPERATION='build'
  PBUILDER_OPERATION='build'
  PBUILDER_PKGDATADIR='/usr/share/pbuilder'
  PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
  PBUILDER_SYSCONFDIR='/etc'
  PPID='3745438'
  PS1='# '
  PS2='> '
  PS4='+ '
  PWD='/'
  SHELL='/bin/bash'
  SHLVL='2'
  SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.LgaP5SmQ/pbuilderrc_L9lk --distribution experimental --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/experimental-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.LgaP5SmQ/b1 --logfile b1/build.log openstructure_2.9.0-1~exp1.dsc'
  SUDO_GID='110'
  SUDO_UID='105'
  SUDO_USER='jenkins'
  TERM='unknown'
  TZ='/usr/share/zoneinfo/Etc/GMT+12'
  USER='root'
  _='/usr/bin/systemd-run'
  http_proxy='http://46.16.76.132:3128'
I: uname -a
  Linux ionos1-amd64 6.1.0-28-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.119-1 (2024-11-22) x86_64 GNU/Linux
I: ls -l /bin
  lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/3745438/tmp/hooks/D02_print_environment finished
 -> Attempting to satisfy build-dependencies
 -> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: amd64
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
 This package was created automatically by pbuilder to satisfy the
 build-dependencies of the package being currently built.
Depends: clustalw, cmake, debhelper-compat (= 13), dh-python, dssp, libboost-all-dev, libeigen3-dev, libfftw3-dev, libglu1-mesa-dev, libopenmm-dev, libopenmm-plugins, libparasail-dev, libpng-dev, libqt5opengl5-dev, libsqlite3-dev, libtiff-dev, python3-dev, python3-matplotlib, python3-numpy, python3-pil, python3-pyqt5, python3-scipy, qtbase5-dev, voronota
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19965 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
 pbuilder-satisfydepends-dummy depends on clustalw; however:
  Package clustalw is not installed.
 pbuilder-satisfydepends-dummy depends on cmake; however:
  Package cmake is not installed.
 pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
  Package debhelper-compat is not installed.
 pbuilder-satisfydepends-dummy depends on dh-python; however:
  Package dh-python is not installed.
 pbuilder-satisfydepends-dummy depends on dssp; however:
  Package dssp is not installed.
 pbuilder-satisfydepends-dummy depends on libboost-all-dev; however:
  Package libboost-all-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libeigen3-dev; however:
  Package libeigen3-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libfftw3-dev; however:
  Package libfftw3-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libglu1-mesa-dev; however:
  Package libglu1-mesa-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libopenmm-dev; however:
  Package libopenmm-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libopenmm-plugins; however:
  Package libopenmm-plugins is not installed.
 pbuilder-satisfydepends-dummy depends on libparasail-dev; however:
  Package libparasail-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libpng-dev; however:
  Package libpng-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libqt5opengl5-dev; however:
  Package libqt5opengl5-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libsqlite3-dev; however:
  Package libsqlite3-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libtiff-dev; however:
  Package libtiff-dev is not installed.
 pbuilder-satisfydepends-dummy depends on python3-dev; however:
  Package python3-dev is not installed.
 pbuilder-satisfydepends-dummy depends on python3-matplotlib; however:
  Package python3-matplotlib is not installed.
 pbuilder-satisfydepends-dummy depends on python3-numpy; however:
  Package python3-numpy is not installed.
 pbuilder-satisfydepends-dummy depends on python3-pil; however:
  Package python3-pil is not installed.
 pbuilder-satisfydepends-dummy depends on python3-pyqt5; however:
  Package python3-pyqt5 is not installed.
 pbuilder-satisfydepends-dummy depends on python3-scipy; however:
  Package python3-scipy is not installed.
 pbuilder-satisfydepends-dummy depends on qtbase5-dev; however:
  Package qtbase5-dev is not installed.
 pbuilder-satisfydepends-dummy depends on voronota; however:
  Package voronota is not installed.

Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
  autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} clustalw{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dssp{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lyx{a} gettext{a} gettext-base{a} gfortran-14{a} gfortran-14-x86-64-linux-gnu{a} groff-base{a} ibverbs-providers{a} icu-devtools{a} intltool-debian{a} libamd-comgr2{a} libamdhip64-5{a} libarchive-zip-perl{a} libarchive13t64{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libblas3{a} libboost-all-dev{a} libboost-atomic-dev{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-chrono-dev{a} libboost-chrono1.83-dev{a} libboost-chrono1.83.0t64{a} libboost-container-dev{a} libboost-container1.83-dev{a} libboost-container1.83.0{a} libboost-context-dev{a} libboost-context1.83-dev{a} libboost-context1.83.0{a} libboost-coroutine-dev{a} libboost-coroutine1.83-dev{a} libboost-coroutine1.83.0{a} libboost-date-time-dev{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-exception-dev{a} libboost-exception1.83-dev{a} libboost-fiber-dev{a} libboost-fiber1.83-dev{a} libboost-fiber1.83.0{a} libboost-filesystem-dev{a} libboost-filesystem1.83-dev{a} libboost-filesystem1.83.0{a} libboost-graph-dev{a} libboost-graph-parallel-dev{a} libboost-graph-parallel1.83-dev{a} libboost-graph-parallel1.83.0{a} libboost-graph1.83-dev{a} libboost-graph1.83.0{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-json-dev{a} libboost-json1.83-dev{a} libboost-json1.83.0{a} libboost-locale-dev{a} libboost-locale1.83-dev{a} libboost-locale1.83.0{a} libboost-log-dev{a} libboost-log1.83-dev{a} libboost-log1.83.0{a} libboost-math-dev{a} libboost-math1.83-dev{a} libboost-math1.83.0{a} libboost-mpi-dev{a} libboost-mpi-python-dev{a} libboost-mpi-python1.83-dev{a} libboost-mpi-python1.83.0{a} libboost-mpi1.83-dev{a} libboost-mpi1.83.0{a} libboost-nowide-dev{a} libboost-nowide1.83-dev{a} libboost-nowide1.83.0{a} libboost-numpy-dev{a} libboost-numpy1.83-dev{a} libboost-numpy1.83.0{a} libboost-program-options-dev{a} libboost-program-options1.83-dev{a} libboost-program-options1.83.0{a} libboost-python-dev{a} libboost-python1.83-dev{a} libboost-python1.83.0{a} libboost-random-dev{a} libboost-random1.83-dev{a} libboost-random1.83.0{a} libboost-regex-dev{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization-dev{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-stacktrace-dev{a} libboost-stacktrace1.83-dev{a} libboost-stacktrace1.83.0{a} libboost-system-dev{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost-test-dev{a} libboost-test1.83-dev{a} libboost-test1.83.0{a} libboost-thread-dev{a} libboost-thread1.83-dev{a} libboost-thread1.83.0{a} libboost-timer-dev{a} libboost-timer1.83-dev{a} libboost-timer1.83.0{a} libboost-tools-dev{a} libboost-type-erasure-dev{a} libboost-type-erasure1.83-dev{a} libboost-type-erasure1.83.0{a} libboost-url-dev{a} libboost-url1.83-dev{a} libboost-url1.83.0{a} libboost-wave-dev{a} libboost-wave1.83-dev{a} libboost-wave1.83.0{a} libboost1.83-dev{a} libboost1.83-tools-dev{a} libbrotli1{a} libcbor0.10{a} libcifpp-data{a} libcifpp7{a} libcom-err2{a} libcups2t64{a} libcurl4t64{a} libdbus-1-3{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdouble-conversion3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libegl-dev{a} libegl-mesa0{a} libegl1{a} libeigen3-dev{a} libelf1t64{a} libevdev2{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-dev{a} libevent-extra-2.1-7t64{a} libevent-openssl-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-quad3{a} libfftw3-single3{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgbm1{a} libgfortran-14-dev{a} libgfortran5{a} libgl-dev{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglib2.0-0t64{a} libglu1-mesa{a} libglu1-mesa-dev{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgudev-1.0-0{a} libharfbuzz0b{a} libhsa-runtime64-1{a} libhsakmt1{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libibmad5{a} libibumad3{a} libibverbs-dev{a} libibverbs1{a} libice6{a} libicu-dev{a} libicu72{a} libimagequant0{a} libinput-bin{a} libinput10{a} libjbig-dev{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc-dev{a} liblerc4{a} libllvm17t64{a} libllvm19{a} libltdl-dev{a} libltdl7{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libmd4c0{a} libmtdev1t64{a} libmunge2{a} libnghttp2-14{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnsl2{a} libnuma-dev{a} libnuma1{a} libopengl-dev{a} libopengl0{a} libopenjp2-7{a} libopenmm-dev{a} libopenmm-plugins{a} libopenmm8.1{a} libopenmpi-dev{a} libopenmpi3t64{a} libparasail-dev{a} libparasail8{a} libpciaccess0{a} libpcre2-16-0{a} libpipeline1{a} libpkgconf3{a} libpmix-dev{a} libpmix2t64{a} libpng-dev{a} libpng16-16t64{a} libproc2-0{a} libpsl5t64{a} libpsm-infinipath1{a} libpsm2-2{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libqhull-r8.0{a} libqt5concurrent5t64{a} libqt5core5t64{a} libqt5dbus5t64{a} libqt5designer5{a} libqt5gui5t64{a} libqt5help5{a} libqt5network5t64{a} libqt5opengl5-dev{a} libqt5opengl5t64{a} libqt5printsupport5t64{a} libqt5sql5t64{a} libqt5test5t64{a} libqt5widgets5t64{a} libqt5xml5t64{a} libraqm0{a} librdmacm1t64{a} libreadline8t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsharpyuv-dev{a} libsharpyuv0{a} libsm6{a} libsqlite3-dev{a} libssh2-1t64{a} libtcl8.6{a} libtiff-dev{a} libtiff6{a} libtiffxx6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libucx0{a} libuv1t64{a} libvulkan-dev{a} libvulkan1{a} libwacom-common{a} libwacom9{a} libwayland-client0{a} libwayland-server0{a} libwebp-dev{a} libwebp7{a} libwebpdecoder3{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-shape0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-util1{a} libxcb-xfixes0{a} libxcb-xinerama0{a} libxcb-xinput0{a} libxcb-xkb1{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxext-dev{a} libxext6{a} libxfixes3{a} libxft2{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxnvctrl0{a} libxrender1{a} libxshmfence1{a} libxslt1.1{a} libxss1{a} libxxf86vm1{a} libz3-4{a} libzstd-dev{a} m4{a} man-db{a} media-types{a} mesa-libgallium{a} mpi-default-bin{a} mpi-default-dev{a} netbase{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} openssl{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} python-babel-localedata{a} python-matplotlib-data{a} python3{a} python3-alabaster{a} python3-appdirs{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-brotli{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-defusedxml{a} python3-dev{a} python3-docutils{a} python3-fonttools{a} python3-fs{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jinja2{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-numpy{a} python3-packaging{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-pygments{a} python3-pyparsing{a} python3-pyqt5{a} python3-pyqt5.sip{a} python3-requests{a} python3-roman{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sympy{a} python3-tk{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-unicodedata2{a} python3-urllib3{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} python3.12-tk{a} python3.13-tk{a} qt5-qmake{a} qt5-qmake-bin{a} qtbase5-dev{a} qtbase5-dev-tools{a} qtchooser{a} readline-common{a} sensible-utils{a} sgml-base{a} shared-mime-info{a} sphinx-common{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} voronota{a} x11-common{a} x11proto-dev{a} xkb-data{a} xml-core{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} 
The following packages are RECOMMENDED but will NOT be installed:
  curl dbus isympy-common javascript-common krb5-locales libarchive-cpio-perl libcoarrays-openmpi-dev libglib2.0-data libjson-xs-perl libldap-common libmail-sendmail-perl libpaper-utils libpng-tools libqt5sql5-ibase libqt5sql5-mysql libqt5sql5-odbc libqt5sql5-psql libqt5sql5-sqlite libqt5sql5-tds libqt5svg5 libsasl2-modules linux-sysctl-defaults lynx mesa-vulkan-drivers psmisc publicsuffix python3-bs4 python3-cssselect python3-html5lib python3-olefile python3-pooch qt5-gtk-platformtheme qttranslations5-l10n qtwayland5 wget xauth xdg-user-dirs 
0 packages upgraded, 483 newly installed, 0 to remove and 0 not upgraded.
Need to get 344 MB of archives. After unpacking 1780 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.7-3 [815 kB]
Get: 2 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB]
Get: 3 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.7-3 [2162 kB]
Get: 4 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.12.7-1 [26.8 kB]
Get: 5 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB]
Get: 6 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB]
Get: 7 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024b-3 [255 kB]
Get: 8 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB]
Get: 9 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB]
Get: 10 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB]
Get: 11 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B]
Get: 12 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB]
Get: 13 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB]
Get: 14 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB]
Get: 15 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB]
Get: 16 http://deb.debian.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB]
Get: 17 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-5 [69.3 kB]
Get: 18 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-5 [169 kB]
Get: 19 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.7-3 [1966 kB]
Get: 20 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.7-3 [671 kB]
Get: 21 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.12.7-1 [9712 B]
Get: 22 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.12.7-1 [27.8 kB]
Get: 23 http://deb.debian.org/debian unstable/main amd64 sgml-base all 1.31 [15.4 kB]
Get: 24 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB]
Get: 25 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-6 [879 kB]
Get: 26 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB]
Get: 27 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.3.2-2 [1382 kB]
Get: 28 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20240203 [158 kB]
Get: 29 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB]
Get: 30 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB]
Get: 31 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB]
Get: 32 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB]
Get: 33 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB]
Get: 34 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB]
Get: 35 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB]
Get: 36 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB]
Get: 37 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB]
Get: 38 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20240808-1 [93.9 kB]
Get: 39 http://deb.debian.org/debian unstable/main amd64 libcbor0.10 amd64 0.10.2-2 [28.3 kB]
Get: 40 http://deb.debian.org/debian unstable/main amd64 libfido2-1 amd64 1.15.0-1+b1 [78.7 kB]
Get: 41 http://deb.debian.org/debian unstable/main amd64 openssh-client amd64 1:9.9p1-3 [991 kB]
Get: 42 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB]
Get: 43 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB]
Get: 44 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB]
Get: 45 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB]
Get: 46 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB]
Get: 47 http://deb.debian.org/debian unstable/main amd64 libtcl8.6 amd64 8.6.15+dfsg-2 [1042 kB]
Get: 48 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB]
Get: 49 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.44-2 [280 kB]
Get: 50 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB]
Get: 51 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB]
Get: 52 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB]
Get: 53 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-1.1+b1 [318 kB]
Get: 54 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-1.1+b1 [391 kB]
Get: 55 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB]
Get: 56 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB]
Get: 57 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB]
Get: 58 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.10-2 [337 kB]
Get: 59 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB]
Get: 60 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1.1+b2 [27.8 kB]
Get: 61 http://deb.debian.org/debian unstable/main amd64 libxft2 amd64 2.3.6-1+b2 [54.5 kB]
Get: 62 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b2 [50.5 kB]
Get: 63 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+23.1 [216 kB]
Get: 64 http://deb.debian.org/debian unstable/main amd64 libxss1 amd64 1:1.2.3-1+b2 [17.0 kB]
Get: 65 http://deb.debian.org/debian unstable/main amd64 libtk8.6 amd64 8.6.15-1 [791 kB]
Get: 66 http://deb.debian.org/debian unstable/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7 [586 kB]
Get: 67 http://deb.debian.org/debian unstable/main amd64 blt amd64 2.5.3+dfsg-7 [6024 B]
Get: 68 http://deb.debian.org/debian unstable/main amd64 clustalw amd64 2.1+lgpl-7 [282 kB]
Get: 69 http://deb.debian.org/debian unstable/main amd64 cmake-data all 3.31.1-1 [2267 kB]
Get: 70 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB]
Get: 71 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB]
Get: 72 http://deb.debian.org/debian unstable/main amd64 libarchive13t64 amd64 3.7.4-1.1 [349 kB]
Get: 73 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB]
Get: 74 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB]
Get: 75 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB]
Get: 76 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB]
Get: 77 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB]
Get: 78 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB]
Get: 79 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB]
Get: 80 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.11.0-1 [351 kB]
Get: 81 http://deb.debian.org/debian unstable/main amd64 libjsoncpp26 amd64 1.9.6-3 [81.7 kB]
Get: 82 http://deb.debian.org/debian unstable/main amd64 librhash1 amd64 1.4.5-1 [132 kB]
Get: 83 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.48.0-7 [148 kB]
Get: 84 http://deb.debian.org/debian unstable/main amd64 cmake amd64 3.31.1-1 [11.9 MB]
Get: 85 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB]
Get: 86 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB]
Get: 87 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB]
Get: 88 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 89 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB]
Get: 90 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B]
Get: 91 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB]
Get: 92 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB]
Get: 93 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB]
Get: 94 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 95 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 96 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB]
Get: 97 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB]
Get: 98 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB]
Get: 99 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get: 100 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB]
Get: 101 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB]
Get: 102 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B]
Get: 103 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get: 104 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 75.2.0-1 [213 kB]
Get: 105 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB]
Get: 106 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.21.0-1 [10.6 kB]
Get: 107 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 75.2.0-1 [731 kB]
Get: 108 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20241024 [109 kB]
Get: 109 http://deb.debian.org/debian unstable/main amd64 xml-core all 0.19 [20.1 kB]
Get: 110 http://deb.debian.org/debian unstable/main amd64 docutils-common all 0.21.2+dfsg-2 [128 kB]
Get: 111 http://deb.debian.org/debian unstable/main amd64 libcifpp-data all 7.0.7-3 [484 kB]
Get: 112 http://deb.debian.org/debian unstable/main amd64 libcifpp7 amd64 7.0.7-3 [1027 kB]
Get: 113 http://deb.debian.org/debian unstable/main amd64 dssp amd64 4.4.10-1 [697 kB]
Get: 114 http://deb.debian.org/debian unstable/main amd64 fontconfig amd64 2.15.0-1.1+b1 [463 kB]
Get: 115 http://deb.debian.org/debian unstable/main amd64 fonts-lyx all 2.4.2.1-1 [190 kB]
Get: 116 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-8 [836 kB]
Get: 117 http://deb.debian.org/debian unstable/main amd64 libgfortran-14-dev amd64 14.2.0-8 [878 kB]
Get: 118 http://deb.debian.org/debian unstable/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-8 [11.7 MB]
Get: 119 http://deb.debian.org/debian unstable/main amd64 gfortran-14 amd64 14.2.0-8 [12.2 kB]
Get: 120 http://deb.debian.org/debian unstable/main amd64 libnl-3-200 amd64 3.7.0-0.3+b1 [59.4 kB]
Get: 121 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-200 amd64 3.7.0-0.3+b1 [182 kB]
Get: 122 http://deb.debian.org/debian unstable/main amd64 libibverbs1 amd64 52.0-2+b1 [62.2 kB]
Get: 123 http://deb.debian.org/debian unstable/main amd64 ibverbs-providers amd64 52.0-2+b1 [343 kB]
Get: 124 http://deb.debian.org/debian unstable/main amd64 icu-devtools amd64 72.1-5+b1 [210 kB]
Get: 125 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB]
Get: 126 http://deb.debian.org/debian unstable/main amd64 libllvm17t64 amd64 1:17.0.6-18 [23.6 MB]
Get: 127 http://deb.debian.org/debian unstable/main amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3+b2 [13.0 MB]
Get: 128 http://deb.debian.org/debian unstable/main amd64 libdrm-common all 2.4.123-1 [8084 B]
Get: 129 http://deb.debian.org/debian unstable/main amd64 libdrm2 amd64 2.4.123-1 [38.7 kB]
Get: 130 http://deb.debian.org/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.123-1 [22.3 kB]
Get: 131 http://deb.debian.org/debian unstable/main amd64 libnuma1 amd64 2.0.18-1+b1 [22.3 kB]
Get: 132 http://deb.debian.org/debian unstable/main amd64 libhsakmt1 amd64 6.1.2+ds-1 [59.8 kB]
Get: 133 http://deb.debian.org/debian unstable/main amd64 libhsa-runtime64-1 amd64 6.1.2-2 [535 kB]
Get: 134 http://deb.debian.org/debian unstable/main amd64 libamdhip64-5 amd64 5.7.1-5 [8877 kB]
Get: 135 http://deb.debian.org/debian unstable/main amd64 libavahi-common-data amd64 0.8-13+b3 [112 kB]
Get: 136 http://deb.debian.org/debian unstable/main amd64 libavahi-common3 amd64 0.8-13+b3 [43.2 kB]
Get: 137 http://deb.debian.org/debian unstable/main amd64 libdbus-1-3 amd64 1.14.10-6 [203 kB]
Get: 138 http://deb.debian.org/debian unstable/main amd64 libavahi-client3 amd64 0.8-13+b3 [47.5 kB]
Get: 139 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-4 [152 kB]
Get: 140 http://deb.debian.org/debian unstable/main amd64 libboost1.83-dev amd64 1.83.0-3.2+b1 [10.6 MB]
Get: 141 http://deb.debian.org/debian unstable/main amd64 libboost-atomic1.83.0 amd64 1.83.0-3.2+b1 [234 kB]
Get: 142 http://deb.debian.org/debian unstable/main amd64 libboost-atomic1.83-dev amd64 1.83.0-3.2+b1 [235 kB]
Get: 143 http://deb.debian.org/debian unstable/main amd64 libboost-atomic-dev amd64 1.83.0.2+b2 [3904 B]
Get: 144 http://deb.debian.org/debian unstable/main amd64 libboost-chrono1.83.0t64 amd64 1.83.0-3.2+b1 [240 kB]
Get: 145 http://deb.debian.org/debian unstable/main amd64 libboost-chrono1.83-dev amd64 1.83.0-3.2+b1 [246 kB]
Get: 146 http://deb.debian.org/debian unstable/main amd64 libboost-chrono-dev amd64 1.83.0.2+b2 [4224 B]
Get: 147 http://deb.debian.org/debian unstable/main amd64 libboost-container1.83.0 amd64 1.83.0-3.2+b1 [259 kB]
Get: 148 http://deb.debian.org/debian unstable/main amd64 libboost-container1.83-dev amd64 1.83.0-3.2+b1 [264 kB]
Get: 149 http://deb.debian.org/debian unstable/main amd64 libboost-container-dev amd64 1.83.0.2+b2 [4072 B]
Get: 150 http://deb.debian.org/debian unstable/main amd64 libboost-date-time1.83.0 amd64 1.83.0-3.2+b1 [230 kB]
Get: 151 http://deb.debian.org/debian unstable/main amd64 libboost-serialization1.83.0 amd64 1.83.0-3.2+b1 [334 kB]
Get: 152 http://deb.debian.org/debian unstable/main amd64 libboost-serialization1.83-dev amd64 1.83.0-3.2+b1 [373 kB]
Get: 153 http://deb.debian.org/debian unstable/main amd64 libboost-date-time1.83-dev amd64 1.83.0-3.2+b1 [239 kB]
Get: 154 http://deb.debian.org/debian unstable/main amd64 libboost-system1.83.0 amd64 1.83.0-3.2+b1 [230 kB]
Get: 155 http://deb.debian.org/debian unstable/main amd64 libboost-system1.83-dev amd64 1.83.0-3.2+b1 [232 kB]
Get: 156 http://deb.debian.org/debian unstable/main amd64 libboost-thread1.83.0 amd64 1.83.0-3.2+b1 [269 kB]
Get: 157 http://deb.debian.org/debian unstable/main amd64 libboost-thread1.83-dev amd64 1.83.0-3.2+b1 [277 kB]
Get: 158 http://deb.debian.org/debian unstable/main amd64 libboost-context1.83.0 amd64 1.83.0-3.2+b1 [231 kB]
Get: 159 http://deb.debian.org/debian unstable/main amd64 libboost-context1.83-dev amd64 1.83.0-3.2+b1 [233 kB]
Get: 160 http://deb.debian.org/debian unstable/main amd64 libboost-context-dev amd64 1.83.0.2+b2 [3804 B]
Get: 161 http://deb.debian.org/debian unstable/main amd64 libboost-coroutine1.83.0 amd64 1.83.0-3.2+b1 [234 kB]
Get: 162 http://deb.debian.org/debian unstable/main amd64 libboost-coroutine1.83-dev amd64 1.83.0-3.2+b1 [236 kB]
Get: 163 http://deb.debian.org/debian unstable/main amd64 libboost-coroutine-dev amd64 1.83.0.2+b2 [3868 B]
Get: 164 http://deb.debian.org/debian unstable/main amd64 libboost-date-time-dev amd64 1.83.0.2+b2 [3596 B]
Get: 165 http://deb.debian.org/debian unstable/main amd64 libboost-dev amd64 1.83.0.2+b2 [3836 B]
Get: 166 http://deb.debian.org/debian unstable/main amd64 libboost-exception1.83-dev amd64 1.83.0-3.2+b1 [230 kB]
Get: 167 http://deb.debian.org/debian unstable/main amd64 libboost-exception-dev amd64 1.83.0.2+b2 [3584 B]
Get: 168 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem1.83.0 amd64 1.83.0-3.2+b1 [282 kB]
Get: 169 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem1.83-dev amd64 1.83.0-3.2+b1 [298 kB]
Get: 170 http://deb.debian.org/debian unstable/main amd64 libboost-fiber1.83.0 amd64 1.83.0-3.2+b1 [254 kB]
Get: 171 http://deb.debian.org/debian unstable/main amd64 libboost-fiber1.83-dev amd64 1.83.0-3.2+b1 [265 kB]
Get: 172 http://deb.debian.org/debian unstable/main amd64 libboost-fiber-dev amd64 1.83.0.2+b2 [4028 B]
Get: 173 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem-dev amd64 1.83.0.2+b2 [3628 B]
Get: 174 http://deb.debian.org/debian unstable/main amd64 libboost-graph1.83.0 amd64 1.83.0-3.2+b1 [359 kB]
Get: 175 http://deb.debian.org/debian unstable/main amd64 libboost-regex1.83.0 amd64 1.83.0-3.2+b1 [330 kB]
Get: 176 http://deb.debian.org/debian unstable/main amd64 libicu-dev amd64 72.1-5+b1 [10.4 MB]
Get: 177 http://deb.debian.org/debian unstable/main amd64 libboost-regex1.83-dev amd64 1.83.0-3.2+b1 [346 kB]
Get: 178 http://deb.debian.org/debian unstable/main amd64 libboost-test1.83.0 amd64 1.83.0-3.2+b1 [471 kB]
Get: 179 http://deb.debian.org/debian unstable/main amd64 libboost-test1.83-dev amd64 1.83.0-3.2+b1 [541 kB]
Get: 180 http://deb.debian.org/debian unstable/main amd64 libboost-graph1.83-dev amd64 1.83.0-3.2+b1 [383 kB]
Get: 181 http://deb.debian.org/debian unstable/main amd64 libboost-graph-dev amd64 1.83.0.2+b2 [3700 B]
Get: 182 http://deb.debian.org/debian unstable/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10+b1 [132 kB]
Get: 183 http://deb.debian.org/debian unstable/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10+b1 [54.3 kB]
Get: 184 http://deb.debian.org/debian unstable/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3 [170 kB]
Get: 185 http://deb.debian.org/debian unstable/main amd64 libpsm2-2 amd64 11.2.185-2.1 [181 kB]
Get: 186 http://deb.debian.org/debian unstable/main amd64 librdmacm1t64 amd64 52.0-2+b1 [70.4 kB]
Get: 187 http://deb.debian.org/debian unstable/main amd64 libfabric1 amd64 1.17.0-3.1 [631 kB]
Get: 188 http://deb.debian.org/debian unstable/main amd64 libhwloc15 amd64 2.11.2-1 [164 kB]
Get: 189 http://deb.debian.org/debian unstable/main amd64 libmunge2 amd64 0.5.15-4+b1 [20.0 kB]
Get: 190 http://deb.debian.org/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b2 [51.9 kB]
Get: 191 http://deb.debian.org/debian unstable/main amd64 libxnvctrl0 amd64 535.171.04-1+b1 [14.2 kB]
Get: 192 http://deb.debian.org/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b2 [40.2 kB]
Get: 193 http://deb.debian.org/debian unstable/main amd64 libhwloc-plugins amd64 2.11.2-1 [18.1 kB]
Get: 194 http://deb.debian.org/debian unstable/main amd64 libpmix2t64 amd64 5.0.4-1 [661 kB]
Get: 195 http://deb.debian.org/debian unstable/main amd64 libibumad3 amd64 52.0-2+b1 [28.2 kB]
Get: 196 http://deb.debian.org/debian unstable/main amd64 libibmad5 amd64 52.0-2+b1 [43.4 kB]
Get: 197 http://deb.debian.org/debian unstable/main amd64 libucx0 amd64 1.17.0+ds-3 [1130 kB]
Get: 198 http://deb.debian.org/debian unstable/main amd64 libopenmpi3t64 amd64 5.0.5-6 [2006 kB]
Get: 199 http://deb.debian.org/debian unstable/main amd64 libboost-mpi1.83.0 amd64 1.83.0-3.2+b1 [271 kB]
Get: 200 http://deb.debian.org/debian unstable/main amd64 libboost-graph-parallel1.83.0 amd64 1.83.0-3.2+b1 [280 kB]
Get: 201 http://deb.debian.org/debian unstable/main amd64 libboost-graph-parallel1.83-dev amd64 1.83.0-3.2+b1 [284 kB]
Get: 202 http://deb.debian.org/debian unstable/main amd64 libboost-graph-parallel-dev amd64 1.83.0.2+b2 [3728 B]
Get: 203 http://deb.debian.org/debian unstable/main amd64 libboost-iostreams1.83-dev amd64 1.83.0-3.2+b1 [261 kB]
Get: 204 http://deb.debian.org/debian unstable/main amd64 libboost-iostreams-dev amd64 1.83.0.2+b2 [3580 B]
Get: 205 http://deb.debian.org/debian unstable/main amd64 libboost-json1.83.0 amd64 1.83.0-3.2+b1 [357 kB]
Get: 206 http://deb.debian.org/debian unstable/main amd64 libboost-json1.83-dev amd64 1.83.0-3.2+b1 [374 kB]
Get: 207 http://deb.debian.org/debian unstable/main amd64 libboost-json-dev amd64 1.83.0.2+b2 [3704 B]
Get: 208 http://deb.debian.org/debian unstable/main amd64 libboost-locale1.83.0 amd64 1.83.0-3.2+b1 [473 kB]
Get: 209 http://deb.debian.org/debian unstable/main amd64 libboost-locale1.83-dev amd64 1.83.0-3.2+b1 [555 kB]
Get: 210 http://deb.debian.org/debian unstable/main amd64 libboost-locale-dev amd64 1.83.0.2+b2 [3924 B]
Get: 211 http://deb.debian.org/debian unstable/main amd64 libboost-log1.83.0 amd64 1.83.0-3.2+b1 [709 kB]
Get: 212 http://deb.debian.org/debian unstable/main amd64 libboost-log1.83-dev amd64 1.83.0-3.2+b1 [879 kB]
Get: 213 http://deb.debian.org/debian unstable/main amd64 libboost-log-dev amd64 1.83.0.2+b2 [3796 B]
Get: 214 http://deb.debian.org/debian unstable/main amd64 libboost-math1.83.0 amd64 1.83.0-3.2+b1 [524 kB]
Get: 215 http://deb.debian.org/debian unstable/main amd64 libboost-math1.83-dev amd64 1.83.0-3.2+b1 [571 kB]
Get: 216 http://deb.debian.org/debian unstable/main amd64 libboost-math-dev amd64 1.83.0.2+b2 [3796 B]
Get: 217 http://deb.debian.org/debian unstable/main amd64 openmpi-common all 5.0.5-6 [95.0 kB]
Get: 218 http://deb.debian.org/debian unstable/main amd64 libnl-3-dev amd64 3.7.0-0.3+b1 [100 kB]
Get: 219 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-dev amd64 3.7.0-0.3+b1 [200 kB]
Get: 220 http://deb.debian.org/debian unstable/main amd64 libibverbs-dev amd64 52.0-2+b1 [636 kB]
Get: 221 http://deb.debian.org/debian unstable/main amd64 libnuma-dev amd64 2.0.18-1+b1 [36.6 kB]
Get: 222 http://deb.debian.org/debian unstable/main amd64 libltdl7 amd64 2.4.7-8 [393 kB]
Get: 223 http://deb.debian.org/debian unstable/main amd64 libltdl-dev amd64 2.4.7-8 [165 kB]
Get: 224 http://deb.debian.org/debian unstable/main amd64 libhwloc-dev amd64 2.11.2-1 [254 kB]
Get: 225 http://deb.debian.org/debian unstable/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10+b1 [182 kB]
Get: 226 http://deb.debian.org/debian unstable/main amd64 libevent-extra-2.1-7t64 amd64 2.1.12-stable-10+b1 [108 kB]
Get: 227 http://deb.debian.org/debian unstable/main amd64 libevent-openssl-2.1-7t64 amd64 2.1.12-stable-10+b1 [61.1 kB]
Get: 228 http://deb.debian.org/debian unstable/main amd64 libevent-dev amd64 2.1.12-stable-10+b1 [305 kB]
Get: 229 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB]
Get: 230 http://deb.debian.org/debian unstable/main amd64 python3-defusedxml all 0.7.1-2 [43.3 kB]
Get: 231 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get: 232 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get: 233 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 7.4.7-4 [158 kB]
Get: 234 http://deb.debian.org/debian unstable/main amd64 libjson-perl all 4.10000-1 [87.5 kB]
Get: 235 http://deb.debian.org/debian unstable/main amd64 sphinx-common all 7.4.7-4 [731 kB]
Get: 236 http://deb.debian.org/debian unstable/main amd64 python3-alabaster all 0.7.16-0.1 [27.9 kB]
Get: 237 http://deb.debian.org/debian unstable/main amd64 python-babel-localedata all 2.16.0-1 [5696 kB]
Get: 238 http://deb.debian.org/debian unstable/main amd64 python3-babel all 2.16.0-1 [114 kB]
Get: 239 http://deb.debian.org/debian unstable/main amd64 python3-roman all 4.2-1 [10.4 kB]
Get: 240 http://deb.debian.org/debian unstable/main amd64 python3-docutils all 0.21.2+dfsg-2 [403 kB]
Get: 241 http://deb.debian.org/debian unstable/main amd64 python3-imagesize all 1.4.1-1 [6688 B]
Get: 242 http://deb.debian.org/debian unstable/main amd64 python3-markupsafe amd64 2.1.5-1+b2 [13.9 kB]
Get: 243 http://deb.debian.org/debian unstable/main amd64 python3-jinja2 all 3.1.3-1 [119 kB]
Get: 244 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.2-1 [55.3 kB]
Get: 245 http://deb.debian.org/debian unstable/main amd64 python3-pygments all 2.18.0+dfsg-1 [836 kB]
Get: 246 http://deb.debian.org/debian unstable/main amd64 python3-certifi all 2024.8.30+dfsg-1 [9576 B]
Get: 247 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer amd64 3.4.0-1+b1 [140 kB]
Get: 248 http://deb.debian.org/debian unstable/main amd64 python3-idna all 3.8-2 [41.6 kB]
Get: 249 http://deb.debian.org/debian unstable/main amd64 python3-urllib3 all 2.0.7-2 [111 kB]
Get: 250 http://deb.debian.org/debian unstable/main amd64 python3-chardet all 5.2.0+dfsg-1 [107 kB]
Get: 251 http://deb.debian.org/debian unstable/main amd64 python3-requests all 2.32.3+dfsg-1 [71.9 kB]
Get: 252 http://deb.debian.org/debian unstable/main amd64 python3-snowballstemmer all 2.2.0-4 [58.0 kB]
Get: 253 http://deb.debian.org/debian unstable/main amd64 python3-sphinx all 7.4.7-4 [588 kB]
Get: 254 http://deb.debian.org/debian unstable/main amd64 libpmix-dev amd64 5.0.4-1 [3972 kB]
Get: 255 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB]
Get: 256 http://deb.debian.org/debian unstable/main amd64 openmpi-bin amd64 5.0.5-6 [188 kB]
Get: 257 http://deb.debian.org/debian unstable/main amd64 libopenmpi-dev amd64 5.0.5-6 [1087 kB]
Get: 258 http://deb.debian.org/debian unstable/main amd64 mpi-default-dev amd64 1.17 [3148 B]
Get: 259 http://deb.debian.org/debian unstable/main amd64 libboost-mpi1.83-dev amd64 1.83.0-3.2+b1 [290 kB]
Get: 260 http://deb.debian.org/debian unstable/main amd64 libboost-mpi-dev amd64 1.83.0.2+b2 [3680 B]
Get: 261 http://deb.debian.org/debian unstable/main amd64 libboost-python1.83.0 amd64 1.83.0-3.2+b1 [320 kB]
Get: 262 http://deb.debian.org/debian unstable/main amd64 mpi-default-bin amd64 1.17 [2372 B]
Get: 263 http://deb.debian.org/debian unstable/main amd64 libboost-mpi-python1.83.0 amd64 1.83.0-3.2+b1 [358 kB]
Get: 264 http://deb.debian.org/debian unstable/main amd64 libboost-mpi-python1.83-dev amd64 1.83.0-3.2+b1 [237 kB]
Get: 265 http://deb.debian.org/debian unstable/main amd64 libboost-mpi-python-dev amd64 1.83.0.2+b2 [3712 B]
Get: 266 http://deb.debian.org/debian unstable/main amd64 libboost-nowide1.83.0 amd64 1.83.0-3.2+b1 [234 kB]
Get: 267 http://deb.debian.org/debian unstable/main amd64 libboost-nowide1.83-dev amd64 1.83.0-3.2+b1 [236 kB]
Get: 268 http://deb.debian.org/debian unstable/main amd64 libboost-nowide-dev amd64 1.83.0.2+b2 [3668 B]
Get: 269 http://deb.debian.org/debian unstable/main amd64 libboost-numpy1.83.0 amd64 1.83.0-3.2+b1 [242 kB]
Get: 270 http://deb.debian.org/debian unstable/main amd64 libboost-numpy1.83-dev amd64 1.83.0-3.2+b1 [246 kB]
Get: 271 http://deb.debian.org/debian unstable/main amd64 libboost-numpy-dev amd64 1.83.0.2+b2 [3644 B]
Get: 272 http://deb.debian.org/debian unstable/main amd64 libboost-program-options1.83.0 amd64 1.83.0-3.2+b1 [347 kB]
Get: 273 http://deb.debian.org/debian unstable/main amd64 libboost-program-options1.83-dev amd64 1.83.0-3.2+b1 [376 kB]
Get: 274 http://deb.debian.org/debian unstable/main amd64 libboost-program-options-dev amd64 1.83.0.2+b2 [3612 B]
Get: 275 http://deb.debian.org/debian unstable/main amd64 libpython3.12t64 amd64 3.12.7-3 [2153 kB]
Get: 276 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.6.4-1 [158 kB]
Get: 277 http://deb.debian.org/debian unstable/main amd64 libpython3.12-dev amd64 3.12.7-3 [5124 kB]
Get: 278 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.12.7-1 [9976 B]
Get: 279 http://deb.debian.org/debian unstable/main amd64 python3.12-dev amd64 3.12.7-3 [505 kB]
Get: 280 http://deb.debian.org/debian unstable/main amd64 python3-dev amd64 3.12.7-1 [26.1 kB]
Get: 281 http://deb.debian.org/debian unstable/main amd64 libboost-python1.83-dev amd64 1.83.0-3.2+b1 [328 kB]
Get: 282 http://deb.debian.org/debian unstable/main amd64 libboost-python-dev amd64 1.83.0.2+b2 [3892 B]
Get: 283 http://deb.debian.org/debian unstable/main amd64 libboost-random1.83.0 amd64 1.83.0-3.2+b1 [238 kB]
Get: 284 http://deb.debian.org/debian unstable/main amd64 libboost-random1.83-dev amd64 1.83.0-3.2+b1 [241 kB]
Get: 285 http://deb.debian.org/debian unstable/main amd64 libboost-random-dev amd64 1.83.0.2+b2 [3592 B]
Get: 286 http://deb.debian.org/debian unstable/main amd64 libboost-regex-dev amd64 1.83.0.2+b2 [3864 B]
Get: 287 http://deb.debian.org/debian unstable/main amd64 libboost-serialization-dev amd64 1.83.0.2+b2 [3832 B]
Get: 288 http://deb.debian.org/debian unstable/main amd64 libboost-stacktrace1.83.0 amd64 1.83.0-3.2+b1 [283 kB]
Get: 289 http://deb.debian.org/debian unstable/main amd64 libboost-stacktrace1.83-dev amd64 1.83.0-3.2+b1 [245 kB]
Get: 290 http://deb.debian.org/debian unstable/main amd64 libboost-stacktrace-dev amd64 1.83.0.2+b2 [3592 B]
Get: 291 http://deb.debian.org/debian unstable/main amd64 libboost-system-dev amd64 1.83.0.2+b2 [3736 B]
Get: 292 http://deb.debian.org/debian unstable/main amd64 libboost-test-dev amd64 1.83.0.2+b2 [3628 B]
Get: 293 http://deb.debian.org/debian unstable/main amd64 libboost-thread-dev amd64 1.83.0.2+b2 [3624 B]
Get: 294 http://deb.debian.org/debian unstable/main amd64 libboost-timer1.83.0 amd64 1.83.0-3.2+b1 [235 kB]
Get: 295 http://deb.debian.org/debian unstable/main amd64 libboost-timer1.83-dev amd64 1.83.0-3.2+b1 [237 kB]
Get: 296 http://deb.debian.org/debian unstable/main amd64 libboost-timer-dev amd64 1.83.0.2+b2 [3716 B]
Get: 297 http://deb.debian.org/debian unstable/main amd64 libboost1.83-tools-dev amd64 1.83.0-3.2+b1 [1529 kB]
Get: 298 http://deb.debian.org/debian unstable/main amd64 libboost-tools-dev amd64 1.83.0.2+b2 [3768 B]
Get: 299 http://deb.debian.org/debian unstable/main amd64 libboost-type-erasure1.83.0 amd64 1.83.0-3.2+b1 [245 kB]
Get: 300 http://deb.debian.org/debian unstable/main amd64 libboost-type-erasure1.83-dev amd64 1.83.0-3.2+b1 [249 kB]
Get: 301 http://deb.debian.org/debian unstable/main amd64 libboost-type-erasure-dev amd64 1.83.0.2+b2 [3688 B]
Get: 302 http://deb.debian.org/debian unstable/main amd64 libboost-url1.83.0 amd64 1.83.0-3.2+b1 [336 kB]
Get: 303 http://deb.debian.org/debian unstable/main amd64 libboost-url1.83-dev amd64 1.83.0-3.2+b1 [421 kB]
Get: 304 http://deb.debian.org/debian unstable/main amd64 libboost-url-dev amd64 1.83.0.2+b2 [3732 B]
Get: 305 http://deb.debian.org/debian unstable/main amd64 libboost-wave1.83.0 amd64 1.83.0-3.2+b1 [437 kB]
Get: 306 http://deb.debian.org/debian unstable/main amd64 libboost-wave1.83-dev amd64 1.83.0-3.2+b1 [486 kB]
Get: 307 http://deb.debian.org/debian unstable/main amd64 libboost-wave-dev amd64 1.83.0.2+b2 [3624 B]
Get: 308 http://deb.debian.org/debian unstable/main amd64 libboost-all-dev amd64 1.83.0.2+b2 [3936 B]
Get: 309 http://deb.debian.org/debian unstable/main amd64 libcups2t64 amd64 2.4.10-2 [251 kB]
Get: 310 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.22-1 [47.3 kB]
Get: 311 http://deb.debian.org/debian unstable/main amd64 libdeflate-dev amd64 1.22-1 [55.8 kB]
Get: 312 http://deb.debian.org/debian unstable/main amd64 libdouble-conversion3 amd64 3.3.0-1+b2 [41.8 kB]
Get: 313 http://deb.debian.org/debian unstable/main amd64 libdrm-intel1 amd64 2.4.123-1 [63.7 kB]
Get: 314 http://deb.debian.org/debian unstable/main amd64 libdrm-radeon1 amd64 2.4.123-1 [22.3 kB]
Get: 315 http://deb.debian.org/debian unstable/main amd64 libglvnd0 amd64 1.7.0-1+b2 [52.0 kB]
Get: 316 http://deb.debian.org/debian unstable/main amd64 libwayland-server0 amd64 1.23.0-1+b1 [34.2 kB]
Get: 317 http://deb.debian.org/debian unstable/main amd64 libxcb-randr0 amd64 1.17.0-2+b1 [117 kB]
Get: 318 http://deb.debian.org/debian unstable/main amd64 libglapi-mesa amd64 24.2.7-1 [37.9 kB]
Get: 319 http://deb.debian.org/debian unstable/main amd64 libllvm19 amd64 1:19.1.3-2 [26.0 MB]
Get: 320 http://deb.debian.org/debian unstable/main amd64 libsensors-config all 1:3.6.0-10 [14.6 kB]
Get: 321 http://deb.debian.org/debian unstable/main amd64 libsensors5 amd64 1:3.6.0-10+b1 [35.1 kB]
Get: 322 http://deb.debian.org/debian unstable/main amd64 libx11-xcb1 amd64 2:1.8.10-2 [241 kB]
Get: 323 http://deb.debian.org/debian unstable/main amd64 libxcb-dri2-0 amd64 1.17.0-2+b1 [107 kB]
Get: 324 http://deb.debian.org/debian unstable/main amd64 libxcb-dri3-0 amd64 1.17.0-2+b1 [107 kB]
Get: 325 http://deb.debian.org/debian unstable/main amd64 libxcb-present0 amd64 1.17.0-2+b1 [106 kB]
Get: 326 http://deb.debian.org/debian unstable/main amd64 libxcb-sync1 amd64 1.17.0-2+b1 [109 kB]
Get: 327 http://deb.debian.org/debian unstable/main amd64 libxcb-xfixes0 amd64 1.17.0-2+b1 [109 kB]
Get: 328 http://deb.debian.org/debian unstable/main amd64 libxshmfence1 amd64 1.3-1+b2 [8848 B]
Get: 329 http://deb.debian.org/debian unstable/main amd64 mesa-libgallium amd64 24.2.7-1 [9186 kB]
Get: 330 http://deb.debian.org/debian unstable/main amd64 libgbm1 amd64 24.2.7-1 [42.8 kB]
Get: 331 http://deb.debian.org/debian unstable/main amd64 libwayland-client0 amd64 1.23.0-1+b1 [26.6 kB]
Get: 332 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB]
Get: 333 http://deb.debian.org/debian unstable/main amd64 libegl-mesa0 amd64 24.2.7-1 [133 kB]
Get: 334 http://deb.debian.org/debian unstable/main amd64 libegl1 amd64 1.7.0-1+b2 [34.6 kB]
Get: 335 http://deb.debian.org/debian unstable/main amd64 libxcb-glx0 amd64 1.17.0-2+b1 [122 kB]
Get: 336 http://deb.debian.org/debian unstable/main amd64 libxfixes3 amd64 1:6.0.0-2+b2 [20.3 kB]
Get: 337 http://deb.debian.org/debian unstable/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b3 [19.3 kB]
Get: 338 http://deb.debian.org/debian unstable/main amd64 libvulkan1 amd64 1.3.296.0-1 [126 kB]
Get: 339 http://deb.debian.org/debian unstable/main amd64 libgl1-mesa-dri amd64 24.2.7-1 [43.9 kB]
Get: 340 http://deb.debian.org/debian unstable/main amd64 libglx-mesa0 amd64 24.2.7-1 [154 kB]
Get: 341 http://deb.debian.org/debian unstable/main amd64 libglx0 amd64 1.7.0-1+b2 [34.9 kB]
Get: 342 http://deb.debian.org/debian unstable/main amd64 libgl1 amd64 1.7.0-1+b2 [89.5 kB]
Get: 343 http://deb.debian.org/debian unstable/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB]
Get: 344 http://deb.debian.org/debian unstable/main amd64 x11proto-dev all 2024.1-1 [603 kB]
Get: 345 http://deb.debian.org/debian unstable/main amd64 libxau-dev amd64 1:1.0.11-1 [23.6 kB]
Get: 346 http://deb.debian.org/debian unstable/main amd64 libxdmcp-dev amd64 1:1.1.5-1 [44.3 kB]
Get: 347 http://deb.debian.org/debian unstable/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB]
Get: 348 http://deb.debian.org/debian unstable/main amd64 libxcb1-dev amd64 1.17.0-2+b1 [181 kB]
Get: 349 http://deb.debian.org/debian unstable/main amd64 libx11-dev amd64 2:1.8.10-2 [891 kB]
Get: 350 http://deb.debian.org/debian unstable/main amd64 libglx-dev amd64 1.7.0-1+b2 [15.8 kB]
Get: 351 http://deb.debian.org/debian unstable/main amd64 libgl-dev amd64 1.7.0-1+b2 [101 kB]
Get: 352 http://deb.debian.org/debian unstable/main amd64 libegl-dev amd64 1.7.0-1+b2 [19.5 kB]
Get: 353 http://deb.debian.org/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB]
Get: 354 http://deb.debian.org/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB]
Get: 355 http://deb.debian.org/debian unstable/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB]
Get: 356 http://deb.debian.org/debian unstable/main amd64 pkg-config amd64 1.8.1-4 [14.0 kB]
Get: 357 http://deb.debian.org/debian unstable/main amd64 libeigen3-dev all 3.4.0-4 [1041 kB]
Get: 358 http://deb.debian.org/debian unstable/main amd64 libevdev2 amd64 1.13.3+dfsg-1 [32.2 kB]
Get: 359 http://deb.debian.org/debian unstable/main amd64 libfftw3-double3 amd64 3.3.10-2 [781 kB]
Get: 360 http://deb.debian.org/debian unstable/main amd64 libfftw3-long3 amd64 3.3.10-2 [347 kB]
Get: 361 http://deb.debian.org/debian unstable/main amd64 libfftw3-quad3 amd64 3.3.10-2 [617 kB]
Get: 362 http://deb.debian.org/debian unstable/main amd64 libfftw3-single3 amd64 3.3.10-2 [809 kB]
Get: 363 http://deb.debian.org/debian unstable/main amd64 libfftw3-bin amd64 3.3.10-2 [51.0 kB]
Get: 364 http://deb.debian.org/debian unstable/main amd64 libfftw3-dev amd64 3.3.10-2 [2113 kB]
Get: 365 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.15-1 [71.8 kB]
Get: 366 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.82.2-3 [1501 kB]
Get: 367 http://deb.debian.org/debian unstable/main amd64 libopengl0 amd64 1.7.0-1+b2 [30.9 kB]
Get: 368 http://deb.debian.org/debian unstable/main amd64 libglu1-mesa amd64 9.0.2-1.1+b2 [185 kB]
Get: 369 http://deb.debian.org/debian unstable/main amd64 libopengl-dev amd64 1.7.0-1+b2 [5388 B]
Get: 370 http://deb.debian.org/debian unstable/main amd64 libglu1-mesa-dev amd64 9.0.2-1.1+b2 [223 kB]
Get: 371 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB]
Get: 372 http://deb.debian.org/debian unstable/main amd64 libgudev-1.0-0 amd64 238-5+b1 [14.8 kB]
Get: 373 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 10.0.1-1 [477 kB]
Get: 374 http://deb.debian.org/debian unstable/main amd64 libice6 amd64 2:1.1.1-1 [65.4 kB]
Get: 375 http://deb.debian.org/debian unstable/main amd64 libimagequant0 amd64 2.18.0-1+b2 [35.2 kB]
Get: 376 http://deb.debian.org/debian unstable/main amd64 libwacom-common all 2.13.0-1 [98.0 kB]
Get: 377 http://deb.debian.org/debian unstable/main amd64 libwacom9 amd64 2.13.0-1 [24.0 kB]
Get: 378 http://deb.debian.org/debian unstable/main amd64 libinput-bin amd64 1.26.2-1 [25.3 kB]
Get: 379 http://deb.debian.org/debian unstable/main amd64 libmtdev1t64 amd64 1.1.6-1.2+b1 [22.5 kB]
Get: 380 http://deb.debian.org/debian unstable/main amd64 libinput10 amd64 1.26.2-1 [131 kB]
Get: 381 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB]
Get: 382 http://deb.debian.org/debian unstable/main amd64 libjbig-dev amd64 2.1-6.1+b2 [31.4 kB]
Get: 383 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3+b1 [168 kB]
Get: 384 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-3+b1 [292 kB]
Get: 385 http://deb.debian.org/debian unstable/main amd64 libjpeg-dev amd64 1:2.1.5-3+b1 [72.2 kB]
Get: 386 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-4 [2450 kB]
Get: 387 http://deb.debian.org/debian unstable/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b2 [29.4 kB]
Get: 388 http://deb.debian.org/debian unstable/main amd64 liblcms2-2 amd64 2.16-2 [160 kB]
Get: 389 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB]
Get: 390 http://deb.debian.org/debian unstable/main amd64 liblerc-dev amd64 4.0.0+ds-5 [183 kB]
Get: 391 http://deb.debian.org/debian unstable/main amd64 liblzma-dev amd64 5.6.3-1+b1 [316 kB]
Get: 392 http://deb.debian.org/debian unstable/main amd64 libmd4c0 amd64 0.5.2-2+b1 [49.0 kB]
Get: 393 http://deb.debian.org/debian unstable/main amd64 libopenjp2-7 amd64 2.5.0-2+b4 [199 kB]
Get: 394 http://deb.debian.org/debian unstable/main amd64 libopenmm8.1 amd64 8.1.2+dfsg-1+b1 [1058 kB]
Get: 395 http://deb.debian.org/debian unstable/main amd64 libopenmm-dev amd64 8.1.2+dfsg-1+b1 [346 kB]
Get: 396 http://deb.debian.org/debian unstable/main amd64 libopenmm-plugins amd64 8.1.2+dfsg-1+b1 [1457 kB]
Get: 397 http://deb.debian.org/debian unstable/main amd64 libparasail8 amd64 2.6.2+dfsg-2 [1890 kB]
Get: 398 http://deb.debian.org/debian unstable/main amd64 libparasail-dev amd64 2.6.2+dfsg-2 [1504 kB]
Get: 399 http://deb.debian.org/debian unstable/main amd64 libpcre2-16-0 amd64 10.44-4 [261 kB]
Get: 400 http://deb.debian.org/debian unstable/main amd64 libpng-dev amd64 1.6.44-2 [366 kB]
Get: 401 http://deb.debian.org/debian unstable/main amd64 libqhull-r8.0 amd64 2020.2-6+b2 [248 kB]
Get: 402 http://deb.debian.org/debian unstable/main amd64 shared-mime-info amd64 2.4-5+b1 [759 kB]
Get: 403 http://deb.debian.org/debian unstable/main amd64 libqt5core5t64 amd64 5.15.15+dfsg-2 [1866 kB]
Get: 404 http://deb.debian.org/debian unstable/main amd64 libqt5concurrent5t64 amd64 5.15.15+dfsg-2 [44.6 kB]
Get: 405 http://deb.debian.org/debian unstable/main amd64 libqt5dbus5t64 amd64 5.15.15+dfsg-2 [217 kB]
Get: 406 http://deb.debian.org/debian unstable/main amd64 libqt5network5t64 amd64 5.15.15+dfsg-2 [682 kB]
Get: 407 http://deb.debian.org/debian unstable/main amd64 libsm6 amd64 2:1.2.4-1 [35.2 kB]
Get: 408 http://deb.debian.org/debian unstable/main amd64 libxcb-icccm4 amd64 0.4.2-1 [27.5 kB]
Get: 409 http://deb.debian.org/debian unstable/main amd64 libxcb-util1 amd64 0.4.0-1+b2 [22.5 kB]
Get: 410 http://deb.debian.org/debian unstable/main amd64 libxcb-image0 amd64 0.4.0-2+b2 [22.2 kB]
Get: 411 http://deb.debian.org/debian unstable/main amd64 libxcb-keysyms1 amd64 0.4.0-1+b3 [15.7 kB]
Get: 412 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB]
Get: 413 http://deb.debian.org/debian unstable/main amd64 libxcb-render-util0 amd64 0.3.9-1+b2 [17.4 kB]
Get: 414 http://deb.debian.org/debian unstable/main amd64 libxcb-shape0 amd64 1.17.0-2+b1 [106 kB]
Get: 415 http://deb.debian.org/debian unstable/main amd64 libxcb-xinerama0 amd64 1.17.0-2+b1 [105 kB]
Get: 416 http://deb.debian.org/debian unstable/main amd64 libxcb-xinput0 amd64 1.17.0-2+b1 [130 kB]
Get: 417 http://deb.debian.org/debian unstable/main amd64 libxcb-xkb1 amd64 1.17.0-2+b1 [130 kB]
Get: 418 http://deb.debian.org/debian unstable/main amd64 xkb-data all 2.42-1 [790 kB]
Get: 419 http://deb.debian.org/debian unstable/main amd64 libxkbcommon0 amd64 1.7.0-1 [113 kB]
Get: 420 http://deb.debian.org/debian unstable/main amd64 libxkbcommon-x11-0 amd64 1.7.0-1 [16.1 kB]
Get: 421 http://deb.debian.org/debian unstable/main amd64 libqt5gui5t64 amd64 5.15.15+dfsg-2 [3498 kB]
Get: 422 http://deb.debian.org/debian unstable/main amd64 libqt5widgets5t64 amd64 5.15.15+dfsg-2 [2400 kB]
Get: 423 http://deb.debian.org/debian unstable/main amd64 libqt5xml5t64 amd64 5.15.15+dfsg-2 [126 kB]
Get: 424 http://deb.debian.org/debian unstable/main amd64 libqt5designer5 amd64 5.15.15-3 [2762 kB]
Get: 425 http://deb.debian.org/debian unstable/main amd64 libqt5sql5t64 amd64 5.15.15+dfsg-2 [125 kB]
Get: 426 http://deb.debian.org/debian unstable/main amd64 libqt5help5 amd64 5.15.15-3 [151 kB]
Get: 427 http://deb.debian.org/debian unstable/main amd64 libqt5opengl5t64 amd64 5.15.15+dfsg-2 [150 kB]
Get: 428 http://deb.debian.org/debian unstable/main amd64 libqt5printsupport5t64 amd64 5.15.15+dfsg-2 [206 kB]
Get: 429 http://deb.debian.org/debian unstable/main amd64 libqt5test5t64 amd64 5.15.15+dfsg-2 [151 kB]
Get: 430 http://deb.debian.org/debian unstable/main amd64 libvulkan-dev amd64 1.3.296.0-1 [1397 kB]
Get: 431 http://deb.debian.org/debian unstable/main amd64 libxext-dev amd64 2:1.3.4-1+b2 [104 kB]
Get: 432 http://deb.debian.org/debian unstable/main amd64 qt5-qmake-bin amd64 5.15.15+dfsg-2 [1066 kB]
Get: 433 http://deb.debian.org/debian unstable/main amd64 qtchooser amd64 66-2 [26.3 kB]
Get: 434 http://deb.debian.org/debian unstable/main amd64 qt5-qmake amd64 5.15.15+dfsg-2 [224 kB]
Get: 435 http://deb.debian.org/debian unstable/main amd64 qtbase5-dev-tools amd64 5.15.15+dfsg-2 [777 kB]
Get: 436 http://deb.debian.org/debian unstable/main amd64 qtbase5-dev amd64 5.15.15+dfsg-2 [1122 kB]
Get: 437 http://deb.debian.org/debian unstable/main amd64 libqt5opengl5-dev amd64 5.15.15+dfsg-2 [51.5 kB]
Get: 438 http://deb.debian.org/debian unstable/main amd64 libraqm0 amd64 0.10.1-1+b2 [14.1 kB]
Get: 439 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.4.0-0.1+b1 [113 kB]
Get: 440 http://deb.debian.org/debian unstable/main amd64 libsharpyuv-dev amd64 1.4.0-0.1+b1 [117 kB]
Get: 441 http://deb.debian.org/debian unstable/main amd64 libsqlite3-dev amd64 3.46.1-1 [1107 kB]
Get: 442 http://deb.debian.org/debian unstable/main amd64 libzstd-dev amd64 1.5.6+dfsg-1+b1 [365 kB]
Get: 443 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.4.0-0.1+b1 [313 kB]
Get: 444 http://deb.debian.org/debian unstable/main amd64 libwebpdemux2 amd64 1.4.0-0.1+b1 [111 kB]
Get: 445 http://deb.debian.org/debian unstable/main amd64 libwebpmux3 amd64 1.4.0-0.1+b1 [123 kB]
Get: 446 http://deb.debian.org/debian unstable/main amd64 libwebpdecoder3 amd64 1.4.0-0.1+b1 [204 kB]
Get: 447 http://deb.debian.org/debian unstable/main amd64 libwebp-dev amd64 1.4.0-0.1+b1 [442 kB]
Get: 448 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB]
Get: 449 http://deb.debian.org/debian unstable/main amd64 libtiffxx6 amd64 4.5.1+git230720-5 [149 kB]
Get: 450 http://deb.debian.org/debian unstable/main amd64 libtiff-dev amd64 4.5.1+git230720-5 [463 kB]
Get: 451 http://deb.debian.org/debian unstable/main amd64 libxslt1.1 amd64 1.1.35-1.1+b1 [233 kB]
Get: 452 http://deb.debian.org/debian unstable/main amd64 python-matplotlib-data all 3.8.3-3 [2731 kB]
Get: 453 http://deb.debian.org/debian unstable/main amd64 python3-appdirs all 1.4.4-4 [12.5 kB]
Get: 454 http://deb.debian.org/debian unstable/main amd64 python3-attr all 24.2.0-1 [68.4 kB]
Get: 455 http://deb.debian.org/debian unstable/main amd64 python3-brotli amd64 1.1.0-2+b6 [321 kB]
Get: 456 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:1.26.4+ds-12 [4738 kB]
Get: 457 http://deb.debian.org/debian unstable/main amd64 python3-contourpy amd64 1.3.0-2+b1 [264 kB]
Get: 458 http://deb.debian.org/debian unstable/main amd64 python3-cycler all 0.12.1-1 [9496 B]
Get: 459 http://deb.debian.org/debian unstable/main amd64 python3-dateutil all 2.9.0-3 [79.3 kB]
Get: 460 http://deb.debian.org/debian unstable/main amd64 python3-decorator all 5.1.1-5 [15.1 kB]
Get: 461 http://deb.debian.org/debian unstable/main amd64 python3-tz all 2024.1-2 [30.9 kB]
Get: 462 http://deb.debian.org/debian unstable/main amd64 python3-six all 1.16.0-7 [16.4 kB]
Get: 463 http://deb.debian.org/debian unstable/main amd64 python3-fs all 2.4.16-4 [95.4 kB]
Get: 464 http://deb.debian.org/debian unstable/main amd64 python3-lxml amd64 5.3.0-1+b1 [1676 kB]
Get: 465 http://deb.debian.org/debian unstable/main amd64 python3-lz4 amd64 4.0.2+dfsg-1+b5 [25.6 kB]
Get: 466 http://deb.debian.org/debian unstable/main amd64 python3-scipy amd64 1.14.1-2 [20.5 MB]
Get: 467 http://deb.debian.org/debian unstable/main amd64 python3-mpmath all 1.3.0-1 [419 kB]
Get: 468 http://deb.debian.org/debian unstable/main amd64 python3-sympy all 1.13.3-1 [4147 kB]
Get: 469 http://deb.debian.org/debian unstable/main amd64 python3-ufolib2 all 0.16.1+dfsg1-1 [32.9 kB]
Get: 470 http://deb.debian.org/debian unstable/main amd64 python3-unicodedata2 amd64 15.1.0+ds-1+b3 [299 kB]
Get: 471 http://deb.debian.org/debian unstable/main amd64 unicode-data all 15.1.0-1 [8547 kB]
Get: 472 http://deb.debian.org/debian unstable/main amd64 python3-fonttools amd64 4.55.0-3 [1634 kB]
Get: 473 http://deb.debian.org/debian unstable/main amd64 python3-kiwisolver amd64 1.4.7-2+b1 [77.0 kB]
Get: 474 http://deb.debian.org/debian unstable/main amd64 python3-pil amd64 10.4.0-1+b1 [522 kB]
Get: 475 http://deb.debian.org/debian unstable/main amd64 python3.12-tk amd64 3.12.7-3 [112 kB]
Get: 476 http://deb.debian.org/debian unstable/main amd64 python3.13-tk amd64 3.13.0-2 [103 kB]
Get: 477 http://deb.debian.org/debian unstable/main amd64 python3-tk amd64 3.12.7-1 [9444 B]
Get: 478 http://deb.debian.org/debian unstable/main amd64 python3-pil.imagetk amd64 10.4.0-1+b1 [79.8 kB]
Get: 479 http://deb.debian.org/debian unstable/main amd64 python3-pyparsing all 3.1.2-1 [146 kB]
Get: 480 http://deb.debian.org/debian unstable/main amd64 python3-matplotlib amd64 3.8.3-3+b1 [5654 kB]
Get: 481 http://deb.debian.org/debian unstable/main amd64 python3-pyqt5.sip amd64 12.15.0-1+b1 [66.2 kB]
Get: 482 http://deb.debian.org/debian unstable/main amd64 python3-pyqt5 amd64 5.15.11+dfsg-1+b1 [2521 kB]
Get: 483 http://deb.debian.org/debian unstable/main amd64 voronota amd64 1.22.3149-2 [2057 kB]
Fetched 344 MB in 15s (22.9 MB/s)
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package libpython3.12-minimal:amd64.
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Preparing to unpack .../libpython3.12-minimal_3.12.7-3_amd64.deb ...
Unpacking libpython3.12-minimal:amd64 (3.12.7-3) ...
Selecting previously unselected package libexpat1:amd64.
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Unpacking libexpat1:amd64 (2.6.4-1) ...
Selecting previously unselected package python3.12-minimal.
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Unpacking python3.12-minimal (3.12.7-3) ...
Setting up libpython3.12-minimal:amd64 (3.12.7-3) ...
Setting up libexpat1:amd64 (2.6.4-1) ...
Setting up python3.12-minimal (3.12.7-3) ...
Selecting previously unselected package python3-minimal.
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Preparing to unpack .../00-python3-minimal_3.12.7-1_amd64.deb ...
Unpacking python3-minimal (3.12.7-1) ...
Selecting previously unselected package media-types.
Preparing to unpack .../01-media-types_10.1.0_all.deb ...
Unpacking media-types (10.1.0) ...
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Preparing to unpack .../02-netbase_6.4_all.deb ...
Unpacking netbase (6.4) ...
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Unpacking tzdata (2024b-3) ...
Selecting previously unselected package libkrb5support0:amd64.
Preparing to unpack .../04-libkrb5support0_1.21.3-3_amd64.deb ...
Unpacking libkrb5support0:amd64 (1.21.3-3) ...
Selecting previously unselected package libcom-err2:amd64.
Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_amd64.deb ...
Unpacking libcom-err2:amd64 (1.47.1-1+b1) ...
Selecting previously unselected package libk5crypto3:amd64.
Preparing to unpack .../06-libk5crypto3_1.21.3-3_amd64.deb ...
Unpacking libk5crypto3:amd64 (1.21.3-3) ...
Selecting previously unselected package libkeyutils1:amd64.
Preparing to unpack .../07-libkeyutils1_1.6.3-4_amd64.deb ...
Unpacking libkeyutils1:amd64 (1.6.3-4) ...
Selecting previously unselected package libkrb5-3:amd64.
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Unpacking libkrb5-3:amd64 (1.21.3-3) ...
Selecting previously unselected package libgssapi-krb5-2:amd64.
Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_amd64.deb ...
Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ...
Selecting previously unselected package libtirpc-common.
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Unpacking libtirpc-common (1.3.4+ds-1.3) ...
Selecting previously unselected package libtirpc3t64:amd64.
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Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64'
Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ...
Selecting previously unselected package libnsl2:amd64.
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Unpacking libnsl2:amd64 (1.3.0-3+b3) ...
Selecting previously unselected package readline-common.
Preparing to unpack .../13-readline-common_8.2-5_all.deb ...
Unpacking readline-common (8.2-5) ...
Selecting previously unselected package libreadline8t64:amd64.
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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
Unpacking libreadline8t64:amd64 (8.2-5) ...
Selecting previously unselected package libpython3.12-stdlib:amd64.
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Setting up python3-minimal (3.12.7-1) ...
Selecting previously unselected package python3.
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Unpacking python3 (3.12.7-1) ...
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Unpacking openssl (3.3.2-2) ...
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Unpacking ca-certificates (20240203) ...
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Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ...
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Unpacking file (1:5.45-3+b1) ...
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Unpacking bsdextrautils (2.40.2-11) ...
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Unpacking man-db (2.13.0-1) ...
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Unpacking libedit2:amd64 (3.1-20240808-1) ...
Selecting previously unselected package libcbor0.10:amd64.
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Unpacking libcbor0.10:amd64 (0.10.2-2) ...
Selecting previously unselected package libfido2-1:amd64.
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Current default time zone: 'Etc/UTC'
Local time is now:      Tue Nov 26 14:07:19 UTC 2024.
Universal Time is now:  Tue Nov 26 14:07:19 UTC 2024.
Run 'dpkg-reconfigure tzdata' if you wish to change it.

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Updating certificates in /etc/ssl/certs...
146 added, 0 removed; done.
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Setting up libtiff-dev:amd64 (4.5.1+git230720-5) ...
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Setting up libboost-date-time1.83-dev:amd64 (1.83.0-3.2+b1) ...
Setting up shared-mime-info (2.4-5+b1) ...
Setting up libboost-numpy-dev (1.83.0.2+b2) ...
Setting up libxkbcommon-x11-0:amd64 (1.7.0-1) ...
Setting up libeigen3-dev (3.4.0-4) ...
Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ...
Setting up libboost-regex1.83-dev:amd64 (1.83.0-3.2+b1) ...
Setting up pkg-config:amd64 (1.8.1-4) ...
Setting up libboost-random1.83-dev:amd64 (1.83.0-3.2+b1) ...
Setting up libboost-serialization-dev:amd64 (1.83.0.2+b2) ...
Setting up libboost-date-time-dev:amd64 (1.83.0.2+b2) ...
Setting up libjs-sphinxdoc (7.4.7-4) ...
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Setting up dh-strip-nondeterminism (1.14.0-1) ...
Setting up libdrm2:amd64 (2.4.123-1) ...
Setting up libnl-3-dev:amd64 (3.7.0-0.3+b1) ...
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Setting up libboost-url-dev:amd64 (1.83.0.2+b2) ...
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Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b2) ...
Setting up libxss1:amd64 (1:1.2.3-1+b2) ...
Setting up libfontconfig1:amd64 (2.15.0-1.1+b1) ...
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Setting up libarchive13t64:amd64 (3.7.4-1.1) ...
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Setting up libavahi-client3:amd64 (0.8-13+b3) ...
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Setting up libboost-filesystem-dev:amd64 (1.83.0.2+b2) ...
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Setting up libboost-thread1.83-dev:amd64 (1.83.0-3.2+b1) ...
Setting up libinput10:amd64 (1.26.2-1) ...
Setting up libibverbs1:amd64 (52.0-2+b1) ...
Setting up fontconfig (2.15.0-1.1+b1) ...
Regenerating fonts cache... done.
Setting up libxft2:amd64 (2.3.6-1+b2) ...
Setting up libboost-json1.83-dev:amd64 (1.83.0-3.2+b1) ...
Setting up libxcb1-dev:amd64 (1.17.0-2+b1) ...
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Setting up libboost-locale1.83-dev:amd64 (1.83.0-3.2+b1) ...
Setting up libcurl4t64:amd64 (8.11.0-1) ...
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Setting up libdrm-radeon1:amd64 (2.4.123-1) ...
Setting up libboost-iostreams1.83-dev:amd64 (1.83.0-3.2+b1) ...
Setting up openssh-client (1:9.9p1-3) ...
Setting up po-debconf (1.0.21+nmu1) ...
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Setting up libdrm-intel1:amd64 (2.4.123-1) ...
Setting up python3.12-tk (3.12.7-3) ...
Setting up libboost-type-erasure1.83-dev:amd64 (1.83.0-3.2+b1) ...
Setting up libx11-dev:amd64 (2:1.8.10-2) ...
Setting up libboost-random-dev:amd64 (1.83.0.2+b2) ...
Setting up libboost-locale-dev:amd64 (1.83.0.2+b2) ...
Setting up libboost-wave-dev:amd64 (1.83.0.2+b2) ...
Setting up libboost-iostreams-dev:amd64 (1.83.0.2+b2) ...
Setting up libhwloc-plugins:amd64 (2.11.2-1) ...
Setting up man-db (2.13.0-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libboost-graph1.83-dev:amd64 (1.83.0-3.2+b1) ...
Setting up python3.13-tk (3.13.0-2) ...
Setting up libboost-container-dev:amd64 (1.83.0.2+b2) ...
Setting up libboost-type-erasure-dev:amd64 (1.83.0.2+b2) ...
Setting up libboost-context1.83-dev:amd64 (1.83.0-3.2+b1) ...
Setting up libnl-route-3-dev:amd64 (3.7.0-0.3+b1) ...
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Setting up libqt5core5t64:amd64 (5.15.15+dfsg-2) ...
Setting up libboost-fiber1.83-dev:amd64 (1.83.0-3.2+b1) ...
Setting up libraqm0:amd64 (0.10.1-1+b2) ...
Setting up sphinx-common (7.4.7-4) ...
Setting up libevent-dev (2.1.12-stable-10+b1) ...
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Setting up libnsl2:amd64 (1.3.0-3+b3) ...
Setting up libqt5sql5t64:amd64 (5.15.15+dfsg-2) ...
Setting up cmake (3.31.1-1) ...
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Setting up libcups2t64:amd64 (2.4.10-2) ...
Setting up libhsakmt1:amd64 (6.1.2+ds-1) ...
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Setting up libfabric1:amd64 (1.17.0-3.1) ...
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Setting up mesa-libgallium:amd64 (24.2.7-1) ...
Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ...
Setting up libqt5dbus5t64:amd64 (5.15.15+dfsg-2) ...
Setting up libpython3.12-stdlib:amd64 (3.12.7-3) ...
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Setting up blt (2.5.3+dfsg-7) ...
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Setting up libqt5xml5t64:amd64 (5.15.15+dfsg-2) ...
Setting up debhelper (13.20) ...
Setting up libboost-context-dev:amd64 (1.83.0.2+b2) ...
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Setting up libpython3-stdlib:amd64 (3.12.7-1) ...
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Setting up python3 (3.12.7-1) ...
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Setting up python3-pyparsing (3.1.2-1) ...
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Setting up python3-typing-extensions (4.12.2-2) ...
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Setting up python3-dateutil (2.9.0-3) ...
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Setting up python3-appdirs (1.4.4-4) ...
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Setting up python3-inflect (7.3.1-2) ...
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Setting up python3-pil.imagetk:amd64 (10.4.0-1+b1) ...
Setting up python3-jaraco.text (4.0.0-1) ...
Setting up python3-dev (3.12.7-1) ...
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Setting up libglu1-mesa-dev:amd64 (9.0.2-1.1+b2) ...
Setting up libopenmpi3t64:amd64 (5.0.5-6) ...
Setting up libboost-mpi1.83.0 (1.83.0-3.2+b1) ...
Setting up openmpi-bin (5.0.5-6) ...
update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist
update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
Setting up python3-pkg-resources (75.2.0-1) ...
Setting up python3-setuptools (75.2.0-1) ...
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Setting up python3-babel (2.16.0-1) ...
update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode
Setting up libqt5widgets5t64:amd64 (5.15.15+dfsg-2) ...
Setting up mpi-default-bin (1.17) ...
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Setting up python3-pygments (2.18.0+dfsg-1) ...
Setting up python3-chardet (5.2.0+dfsg-1) ...
Setting up python3-requests (2.32.3+dfsg-1) ...
Setting up python3-numpy (1:1.26.4+ds-12) ...
Setting up python3-contourpy (1.3.0-2+b1) ...
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Setting up libboost-graph-parallel1.83-dev (1.83.0-3.2+b1) ...
Setting up libqt5printsupport5t64:amd64 (5.15.15+dfsg-2) ...
Setting up dh-python (6.20241024) ...
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Setting up libqt5designer5:amd64 (5.15.15-3) ...
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Setting up python3-pyqt5 (5.15.11+dfsg-1+b1) ...
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Setting up python3-ufolib2 (0.16.1+dfsg1-1) ...
Setting up python3-fonttools (4.55.0-3) ...
Setting up python3-matplotlib (3.8.3-3+b1) ...
Processing triggers for libc-bin (2.40-4) ...
Processing triggers for sgml-base (1.31) ...
Setting up docutils-common (0.21.2+dfsg-2) ...
Processing triggers for sgml-base (1.31) ...
Setting up python3-docutils (0.21.2+dfsg-2) ...
Setting up python3-sphinx (7.4.7-4) ...
Setting up libpmix-dev:amd64 (5.0.4-1) ...
Setting up libopenmpi-dev:amd64 (5.0.5-6) ...
update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode
Setting up mpi-default-dev (1.17) ...
Setting up libboost-mpi1.83-dev (1.83.0-3.2+b1) ...
Setting up libboost-mpi-dev (1.83.0.2+b2) ...
Setting up libboost-mpi-python1.83-dev (1.83.0-3.2+b1) ...
Setting up libboost-mpi-python-dev (1.83.0.2+b2) ...
Setting up libboost-all-dev (1.83.0.2+b2) ...
Processing triggers for ca-certificates (20240203) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
 -> Finished parsing the build-deps
I: Building the package
I: Running cd /build/reproducible-path/openstructure-2.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S  > ../openstructure_2.9.0-1~exp1_source.changes
dpkg-buildpackage: info: source package openstructure
dpkg-buildpackage: info: source version 2.9.0-1~exp1
dpkg-buildpackage: info: source distribution experimental
dpkg-buildpackage: info: source changed by Andrius Merkys <merkys@debian.org>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture amd64
 debian/rules clean
dh clean --with python3
   dh_clean
 debian/rules binary
dh binary --with python3
   dh_update_autotools_config
   dh_autoreconf
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/build/reproducible-path/openstructure-2.9.0'
dh_auto_configure -- -DOPTIMIZE=ON -DUBUNTU_LAYOUT=ON -DENABLE_MM=ON -DOPEN_MM_PLUGIN_DIR=/usr/lib/x86_64-linux-gnu/openmm/plugins -DENABLE_PARASAIL=ON
	cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DOPTIMIZE=ON -DUBUNTU_LAYOUT=ON -DENABLE_MM=ON -DOPEN_MM_PLUGIN_DIR=/usr/lib/x86_64-linux-gnu/openmm/plugins -DENABLE_PARASAIL=ON ..
-- The CXX compiler identification is GNU 14.2.0
-- The C compiler identification is GNU 14.2.0
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of void*
-- Check size of void* - done
CMake Warning (dev) at cmake_support/OST.cmake:892 (exec_program):
  Policy CMP0153 is not set: The exec_program command should not be called.
  Run "cmake --help-policy CMP0153" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.

  Use execute_process() instead.
Call Stack (most recent call first):
  cmake_support/OST.cmake:921 (get_compiler_version)
  CMakeLists.txt:173 (setup_compiler_flags)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found Python: /usr/bin/python3 (found suitable version "3.12.7", minimum required is "3.6") found components: Interpreter Development Development.Module Development.Embed
CMake Warning (dev) at cmake_support/OST.cmake:955 (find_package):
  Policy CMP0167 is not set: The FindBoost module is removed.  Run "cmake
  --help-policy CMP0167" for policy details.  Use the cmake_policy command to
  set the policy and suppress this warning.

Call Stack (most recent call first):
  CMakeLists.txt:190 (setup_boost)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found Boost package: python312
CMake Warning (dev) at cmake_support/OST.cmake:969 (find_package):
  Policy CMP0167 is not set: The FindBoost module is removed.  Run "cmake
  --help-policy CMP0167" for policy details.  Use the cmake_policy command to
  set the policy and suppress this warning.

Call Stack (most recent call first):
  CMakeLists.txt:190 (setup_boost)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.31") found components: unit_test_framework
CMake Warning (dev) at cmake_support/OST.cmake:976 (find_package):
  Policy CMP0167 is not set: The FindBoost module is removed.  Run "cmake
  --help-policy CMP0167" for policy details.  Use the cmake_policy command to
  set the policy and suppress this warning.

Call Stack (most recent call first):
  CMakeLists.txt:190 (setup_boost)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.31") found components: filesystem system
CMake Warning (dev) at cmake_support/OST.cmake:980 (find_package):
  Policy CMP0167 is not set: The FindBoost module is removed.  Run "cmake
  --help-policy CMP0167" for policy details.  Use the cmake_policy command to
  set the policy and suppress this warning.

Call Stack (most recent call first):
  CMakeLists.txt:190 (setup_boost)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.31") found components: iostreams
CMake Warning (dev) at cmake_support/OST.cmake:983 (find_package):
  Policy CMP0167 is not set: The FindBoost module is removed.  Run "cmake
  --help-policy CMP0167" for policy details.  Use the cmake_policy command to
  set the policy and suppress this warning.

Call Stack (most recent call first):
  CMakeLists.txt:190 (setup_boost)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.31") found components: program_options
CMake Warning (dev) at cmake_support/OST.cmake:986 (find_package):
  Policy CMP0167 is not set: The FindBoost module is removed.  Run "cmake
  --help-policy CMP0167" for policy details.  Use the cmake_policy command to
  set the policy and suppress this warning.

Call Stack (most recent call first):
  CMakeLists.txt:190 (setup_boost)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.31") found components: regex
CMake Warning (dev) at cmake_support/OST.cmake:989 (find_package):
  Policy CMP0167 is not set: The FindBoost module is removed.  Run "cmake
  --help-policy CMP0167" for policy details.  Use the cmake_policy command to
  set the policy and suppress this warning.

Call Stack (most recent call first):
  CMakeLists.txt:190 (setup_boost)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.31") found components: thread
-- Found OpenGL: /usr/lib/x86_64-linux-gnu/libOpenGL.so
-- Found EIGEN: /usr/include/eigen3 (Required is at least version "3.2.0")
-- Found SQLITE3: /usr/lib/x86_64-linux-gnu/libsqlite3.so (Required is at least version "3.7.13")
-- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.3.1")
-- Found PNG: /usr/lib/x86_64-linux-gnu/libpng.so (found version "1.6.44")
-- Found FFTW: /usr/lib/x86_64-linux-gnu/libfftw3f.so
-- Found TIFF: /usr/lib/x86_64-linux-gnu/libtiff.so (found version "4.5.1")
-- Found OpenMM: /usr/lib/x86_64-linux-gnu/libOpenMM.so
-- Searching for python module PyQt5 for /usr/bin/python3
-- Found python module PyQt5
-- Searching for python module PyQt5.sip for /usr/bin/python3
-- Found python module PyQt5.sip
CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:291 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/base/src/CMakeLists.txt:43 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:584 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:608 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:617 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:432 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/base/pymod/CMakeLists.txt:33 (script)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:435 (copy_if_different)
  modules/base/pymod/CMakeLists.txt:33 (script)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/bindings/src/CMakeLists.txt:13 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:291 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/bindings/src/CMakeLists.txt:13 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:584 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:608 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:617 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/bindings/pymod/CMakeLists.txt:27 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  modules/config/CMakeLists.txt:65 (stage_and_install_headers)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  modules/config/CMakeLists.txt:65 (stage_and_install_headers)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  modules/config/CMakeLists.txt:65 (stage_and_install_headers)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  modules/config/CMakeLists.txt:65 (stage_and_install_headers)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:291 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/config/CMakeLists.txt:65 (stage_and_install_headers)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/conop/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/conop/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/conop/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/conop/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/conop/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/conop/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/conop/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/conop/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/conop/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/conop/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/conop/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/conop/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/conop/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:291 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/conop/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:584 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/conop/pymod/CMakeLists.txt:15 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:608 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/conop/pymod/CMakeLists.txt:15 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/conop/pymod/CMakeLists.txt:15 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/conop/pymod/CMakeLists.txt:15 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/conop/pymod/CMakeLists.txt:15 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/conop/pymod/CMakeLists.txt:15 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/conop/pymod/CMakeLists.txt:15 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/conop/pymod/CMakeLists.txt:15 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:617 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/conop/pymod/CMakeLists.txt:15 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/db/src/CMakeLists.txt:17 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/db/src/CMakeLists.txt:17 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/db/src/CMakeLists.txt:17 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/db/src/CMakeLists.txt:17 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/db/src/CMakeLists.txt:17 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/db/src/CMakeLists.txt:17 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:291 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/db/src/CMakeLists.txt:17 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:584 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/db/pymod/CMakeLists.txt:6 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:608 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/db/pymod/CMakeLists.txt:6 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/db/pymod/CMakeLists.txt:6 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/db/pymod/CMakeLists.txt:6 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/db/pymod/CMakeLists.txt:6 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:617 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/db/pymod/CMakeLists.txt:6 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:291 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/geom/src/CMakeLists.txt:55 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:584 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/geom/pymod/CMakeLists.txt:21 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:608 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/geom/pymod/CMakeLists.txt:21 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/geom/pymod/CMakeLists.txt:21 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/geom/pymod/CMakeLists.txt:21 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/geom/pymod/CMakeLists.txt:21 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:617 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/geom/pymod/CMakeLists.txt:21 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:291 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gfx/src/CMakeLists.txt:193 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gfx/src/CMakeLists.txt:244 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gfx/src/CMakeLists.txt:244 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:584 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gfx/pymod/CMakeLists.txt:22 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:608 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gfx/pymod/CMakeLists.txt:22 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gfx/pymod/CMakeLists.txt:22 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gfx/pymod/CMakeLists.txt:22 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gfx/pymod/CMakeLists.txt:22 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gfx/pymod/CMakeLists.txt:22 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gfx/pymod/CMakeLists.txt:22 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gfx/pymod/CMakeLists.txt:22 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:617 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gfx/pymod/CMakeLists.txt:22 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gfx/pymod/CMakeLists.txt:27 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:291 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/gui/src/CMakeLists.txt:443 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/share/CMakeLists.txt:26 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/share/CMakeLists.txt:26 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/share/CMakeLists.txt:26 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/share/CMakeLists.txt:26 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/share/CMakeLists.txt:26 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/share/CMakeLists.txt:26 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/share/CMakeLists.txt:26 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/share/CMakeLists.txt:26 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/share/CMakeLists.txt:26 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/share/CMakeLists.txt:26 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/share/CMakeLists.txt:26 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/share/CMakeLists.txt:26 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/share/CMakeLists.txt:26 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/share/CMakeLists.txt:26 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/share/CMakeLists.txt:26 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/share/CMakeLists.txt:26 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/share/CMakeLists.txt:31 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:584 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:608 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:617 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:608 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:617 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:608 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:617 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/pymod/CMakeLists.txt:93 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/pymod/CMakeLists.txt:101 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/pymod/CMakeLists.txt:111 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/pymod/CMakeLists.txt:111 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/pymod/CMakeLists.txt:111 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/gui/pymod/CMakeLists.txt:111 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:291 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/base/src/CMakeLists.txt:102 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:584 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/img/base/pymod/CMakeLists.txt:19 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:608 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/img/base/pymod/CMakeLists.txt:19 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/img/base/pymod/CMakeLists.txt:19 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/img/base/pymod/CMakeLists.txt:19 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/img/base/pymod/CMakeLists.txt:19 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:617 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/img/base/pymod/CMakeLists.txt:19 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:291 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/img/alg/src/CMakeLists.txt:95 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:584 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/img/alg/pymod/CMakeLists.txt:10 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:608 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/img/alg/pymod/CMakeLists.txt:10 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/img/alg/pymod/CMakeLists.txt:10 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/img/alg/pymod/CMakeLists.txt:10 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/img/alg/pymod/CMakeLists.txt:10 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:617 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/img/alg/pymod/CMakeLists.txt:10 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/info/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/info/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/info/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/info/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/info/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/info/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/info/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/info/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/info/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/info/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/info/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/info/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/info/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/info/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/info/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/info/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:291 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/info/src/CMakeLists.txt:32 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:584 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/info/pymod/CMakeLists.txt:5 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:608 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/info/pymod/CMakeLists.txt:5 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/info/pymod/CMakeLists.txt:5 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/info/pymod/CMakeLists.txt:5 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/info/pymod/CMakeLists.txt:5 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:617 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/info/pymod/CMakeLists.txt:5 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:291 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/io/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:584 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/io/pymod/CMakeLists.txt:17 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:608 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/io/pymod/CMakeLists.txt:17 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/io/pymod/CMakeLists.txt:17 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/io/pymod/CMakeLists.txt:17 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/io/pymod/CMakeLists.txt:17 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/io/pymod/CMakeLists.txt:17 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/io/pymod/CMakeLists.txt:17 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/io/pymod/CMakeLists.txt:17 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/io/pymod/CMakeLists.txt:17 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/io/pymod/CMakeLists.txt:17 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/io/pymod/CMakeLists.txt:17 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:617 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/io/pymod/CMakeLists.txt:17 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:291 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/base/src/CMakeLists.txt:108 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:584 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/mol/base/pymod/CMakeLists.txt:26 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:608 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/mol/base/pymod/CMakeLists.txt:26 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/base/pymod/CMakeLists.txt:26 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/base/pymod/CMakeLists.txt:26 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/base/pymod/CMakeLists.txt:26 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:617 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/mol/base/pymod/CMakeLists.txt:26 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:291 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/alg/src/CMakeLists.txt:65 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/mol/alg/src/CMakeLists.txt:71 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/mol/alg/src/CMakeLists.txt:76 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:584 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:608 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:617 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/mol/alg/pymod/CMakeLists.txt:42 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/mol/alg/pymod/CMakeLists.txt:46 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/mm/src/CMakeLists.txt:47 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/mm/src/CMakeLists.txt:47 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/mm/src/CMakeLists.txt:47 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/mm/src/CMakeLists.txt:47 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/mm/src/CMakeLists.txt:47 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/mm/src/CMakeLists.txt:47 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/mm/src/CMakeLists.txt:47 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/mm/src/CMakeLists.txt:47 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/mm/src/CMakeLists.txt:47 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/mm/src/CMakeLists.txt:47 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/mm/src/CMakeLists.txt:47 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/mm/src/CMakeLists.txt:47 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/mm/src/CMakeLists.txt:47 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/mm/src/CMakeLists.txt:47 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/mm/src/CMakeLists.txt:47 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/mm/src/CMakeLists.txt:47 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/mm/src/CMakeLists.txt:47 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:291 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/mol/mm/src/CMakeLists.txt:47 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/mol/mm/src/CMakeLists.txt:55 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/mol/mm/src/CMakeLists.txt:60 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:584 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/mol/mm/pymod/CMakeLists.txt:22 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:608 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/mol/mm/pymod/CMakeLists.txt:22 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/mm/pymod/CMakeLists.txt:22 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/mol/mm/pymod/CMakeLists.txt:22 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/mm/pymod/CMakeLists.txt:22 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/mm/pymod/CMakeLists.txt:22 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/mm/pymod/CMakeLists.txt:22 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/mol/mm/pymod/CMakeLists.txt:22 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:617 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/mol/mm/pymod/CMakeLists.txt:22 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/base/src/CMakeLists.txt:40 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/base/src/CMakeLists.txt:40 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/base/src/CMakeLists.txt:40 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/base/src/CMakeLists.txt:40 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/base/src/CMakeLists.txt:40 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/base/src/CMakeLists.txt:40 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/base/src/CMakeLists.txt:40 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/base/src/CMakeLists.txt:40 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/base/src/CMakeLists.txt:40 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/base/src/CMakeLists.txt:40 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/base/src/CMakeLists.txt:40 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/base/src/CMakeLists.txt:40 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/base/src/CMakeLists.txt:40 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/base/src/CMakeLists.txt:40 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/base/src/CMakeLists.txt:40 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/base/src/CMakeLists.txt:40 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:291 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/base/src/CMakeLists.txt:40 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:584 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/seq/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:608 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/seq/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/seq/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/seq/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/seq/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:617 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/seq/base/pymod/CMakeLists.txt:8 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:289 (copy_if_different)
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:291 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:267 (stage_and_install_headers)
  modules/seq/alg/src/CMakeLists.txt:49 (module)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:584 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/seq/alg/pymod/CMakeLists.txt:5 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:608 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/seq/alg/pymod/CMakeLists.txt:5 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/seq/alg/pymod/CMakeLists.txt:5 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/seq/alg/pymod/CMakeLists.txt:5 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/seq/alg/pymod/CMakeLists.txt:5 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:613 (copy_if_different)
  modules/seq/alg/pymod/CMakeLists.txt:5 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/seq/alg/pymod/CMakeLists.txt:5 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/seq/alg/pymod/CMakeLists.txt:5 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/seq/alg/pymod/CMakeLists.txt:5 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/seq/alg/pymod/CMakeLists.txt:5 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/seq/alg/pymod/CMakeLists.txt:5 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/seq/alg/pymod/CMakeLists.txt:5 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/seq/alg/pymod/CMakeLists.txt:5 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:493 (add_custom_command):
  Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given.  Assuming
  POST_BUILD to preserve backward compatibility.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:616 (compile_py_files)
  modules/seq/alg/pymod/CMakeLists.txt:5 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:617 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/seq/alg/pymod/CMakeLists.txt:5 (pymod)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/seq/alg/pymod/CMakeLists.txt:10 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/seq/alg/pymod/CMakeLists.txt:14 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  modules/seq/alg/pymod/CMakeLists.txt:18 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.


CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:435 (copy_if_different)
  scripts/CMakeLists.txt:23 (script)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:435 (copy_if_different)
  scripts/CMakeLists.txt:25 (script)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:435 (copy_if_different)
  scripts/CMakeLists.txt:28 (script)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:432 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  scripts/CMakeLists.txt:33 (script)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:435 (copy_if_different)
  scripts/CMakeLists.txt:33 (script)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  scripts/CMakeLists.txt:42 (copy_if_different)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at scripts/CMakeLists.txt:45 (install):
  Policy CMP0177 is not set: install() DESTINATION paths are normalized.  Run
  "cmake --help-policy CMP0177" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:1016 (copy_if_different)
  actions/CMakeLists.txt:4 (ost_action)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:1016 (copy_if_different)
  actions/CMakeLists.txt:5 (ost_action)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at cmake_support/OST.cmake:124 (add_custom_command):
  The following keywords are not supported when using
  add_custom_command(TARGET): DEPENDS.

  Policy CMP0175 is not set: add_custom_command() rejects invalid arguments.
  Run "cmake --help-policy CMP0175" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
Call Stack (most recent call first):
  cmake_support/OST.cmake:1016 (copy_if_different)
  actions/CMakeLists.txt:6 (ost_action)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- OpenStructure will be built with the following options:
   Install Prefix                        (-DPREFIX) : /usr
   RPath in install                   (-DUSE_RPATH) : OFF
   Info support                     (-DENABLE_INFO) : ON
   Graphical interface               (-DENABLE_GUI) : ON
   OpenGL support                    (-DENABLE_GFX) : ON
   Shader support                    (-DUSE_SHADER) : OFF
   SpaceNav Device support         (-DENABLE_SPNAV) : OFF
   OpenMM support                     (-DENABLE_MM) : ON
   OpenMM plugins            (-DOPEN_MM_PLUGIN_DIR) : /usr/lib/x86_64-linux-gnu/openmm/plugins
   Parasail alignment library   (-DENABLE_PARASAIL) : ON
   Optimize                            (-DOPTIMIZE) : ON
   Profiling support                    (-DPROFILE) : OFF
   Double Precision        (-DUSE_DOUBLE_PRECISION) : OFF
   Compound Lib                    (-DCOMPOUND_LIB) : NONE
   TMAlign and TMScore          (-DCOMPILE_TMTOOLS) : OFF
   Static Libraries               (-DENABLE_STATIC) : OFF
   Debian/Ubuntu directory layout (-DUBUNTU_LAYOUT) : ON
   Hidden object visibility  (-DHIDDEN_VISIBILITY) : OFF
-- Configuring done (4.9s)
-- Generating done (1.3s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
    CMAKE_INSTALL_LIBDIR
    CMAKE_INSTALL_LOCALSTATEDIR
    CMAKE_INSTALL_RUNSTATEDIR
    CMAKE_INSTALL_SYSCONFDIR
    FETCHCONTENT_FULLY_DISCONNECTED


-- Build files have been written to: /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu
make[1]: Leaving directory '/build/reproducible-path/openstructure-2.9.0'
   dh_auto_build
	cd obj-x86_64-linux-gnu && make -j20 "INSTALL=install --strip-program=true" VERBOSE=1
make[1]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
/usr/bin/cmake -S/build/reproducible-path/openstructure-2.9.0 -B/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu//CMakeFiles/progress.marks
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src/CMakeFiles/create_stage.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod/CMakeFiles/ost_bindings_pymod.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/conop/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/pymod/CMakeFiles/ost_conop_pymod.dir/DependInfo.cmake "--color="
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make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/./lga.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./lga.py
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/./__init__.py
make  -f modules/img/base/pymod/CMakeFiles/ost_img_pymod.dir/build.make modules/img/base/pymod/CMakeFiles/ost_img_pymod.dir/build
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/img/alg/pymod/CMakeFiles/ost_img_alg_pymod.dir/build.make modules/img/alg/pymod/CMakeFiles/ost_img_alg_pymod.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/pymod/./cleanup.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/conop/./cleanup.py
make  -f modules/info/pymod/CMakeFiles/ost_info_pymod.dir/build.make modules/info/pymod/CMakeFiles/ost_info_pymod.dir/build
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/img/./__init__.py
make  -f modules/io/pymod/CMakeFiles/ost_io_pymod.dir/build.make modules/io/pymod/CMakeFiles/ost_io_pymod.dir/build
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/info/./__init__.py
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/img/alg/./__init__.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/./py_gfx_obj.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gfx/./py_gfx_obj.py
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/io/./__init__.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/share/icons/close_icon.png /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/close_icon.png
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/color_options_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/color_options_widget.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/dng/termuse.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/dng/termuse.py
make  -f modules/mol/alg/pymod/CMakeFiles/ost_mol_alg_pymod.dir/build.make modules/mol/alg/pymod/CMakeFiles/ost_mol_alg_pymod.dir/depend
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E make_directory /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/bin
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod/CMakeFiles/ost_mol_alg_pymod.dir/DependInfo.cmake "--color="
make  -f modules/mol/mm/pymod/CMakeFiles/ost_mol_mm_pymod.dir/build.make modules/mol/mm/pymod/CMakeFiles/ost_mol_mm_pymod.dir/depend
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/./init_context_menu.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/./init_context_menu.py
make  -f modules/seq/base/pymod/CMakeFiles/ost_seq_pymod.dir/build.make modules/seq/base/pymod/CMakeFiles/ost_seq_pymod.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod/CMakeFiles/ost_mol_mm_pymod.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/./hbplus.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./hbplus.py
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/base/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/pymod/CMakeFiles/ost_seq_pymod.dir/DependInfo.cmake "--color="
[  0%] Built target subst___init__.py
make  -f modules/mol/base/pymod/CMakeFiles/ost_mol_pymod.dir/build.make modules/mol/base/pymod/CMakeFiles/ost_mol_pymod.dir/build
[  0%] Built target gui_images
[  0%] Built target ost_db_pymod
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/./__init__.py
make  -f modules/seq/alg/pymod/CMakeFiles/ost_seq_alg_pymod.dir/build.make modules/seq/alg/pymod/CMakeFiles/ost_seq_alg_pymod.dir/depend
make  -f scripts/CMakeFiles/subst_ost_startup.py.dir/build.make scripts/CMakeFiles/subst_ost_startup.py.dir/depend
[  0%] Built target ost_geom_pymod
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/pymod/CMakeFiles/ost_seq_alg_pymod.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/dng/superpositiondialog.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/dng/superpositiondialog.py
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[  0%] Built target ost_img_pymod
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/scripts /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts/CMakeFiles/subst_ost_startup.py.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E make_directory /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/openstructure/libexec
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/pymod/./remote.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/io/./remote.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/./init_menubar.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/./init_menubar.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/share/icons/critical_icon.png /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/critical_icon.png
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/./msms.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./msms.py
[  0%] Built target ost_info_pymod
make  -f modules/mol/alg/pymod/CMakeFiles/ost_mol_alg_pymod.dir/build.make modules/mol/alg/pymod/CMakeFiles/ost_mol_alg_pymod.dir/build
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./__init__.py
make  -f scripts/CMakeFiles/subst_ost_config.dir/build.make scripts/CMakeFiles/subst_ost_config.dir/depend
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/color_select_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/color_select_widget.py
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/mm/pymod/CMakeFiles/ost_mol_mm_pymod.dir/build.make modules/mol/mm/pymod/CMakeFiles/ost_mol_mm_pymod.dir/build
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/scripts /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts/CMakeFiles/subst_ost_config.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/./init_spacenav.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/./init_spacenav.py
[  0%] Built target ost_gfx_pymod
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E make_directory /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/tests
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/dng/init.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/dng/init.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/pymod/./repository.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/io/./repository.py
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[  0%] Built target ost_conop_pymod
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/share/icons/delete_icon.png /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/delete_icon.png
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/./tmtools.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./tmtools.py
[  0%] Built target ost_img_alg_pymod
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/mm/./__init__.py
make  -f modules/seq/base/pymod/CMakeFiles/ost_seq_pymod.dir/build.make modules/seq/base/pymod/CMakeFiles/ost_seq_pymod.dir/build
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/seq/./__init__.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/./views.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./views.py
make  -f modules/seq/alg/pymod/CMakeFiles/ost_seq_alg_pymod.dir/build.make modules/seq/alg/pymod/CMakeFiles/ost_seq_alg_pymod.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/combo_options_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/combo_options_widget.py
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/pymod/./__init__.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/seq/alg/./__init__.py
make  -f scripts/CMakeFiles/subst_ost_startup.py.dir/build.make scripts/CMakeFiles/subst_ost_startup.py.dir/build
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f scripts/CMakeFiles/subst_ost.dir/build.make scripts/CMakeFiles/subst_ost.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -DINPUT_FILE=/build/reproducible-path/openstructure-2.9.0/scripts/ost_startup.py.in -DOUT_FILE=ost_startup.py -DBUILD_TYPE=Release -DPython_EXECUTABLE=/usr/bin/python3 -DPython_VERSION=3.12.7 -DLIBDIR=lib -DLIBEXEC_PATH=lib/openstructure/libexec -DPYTHON_MODULE_PATH=python3.12/dist-packages/ -P /build/reproducible-path/openstructure-2.9.0/cmake_support/substitute.cmake
make  -f scripts/CMakeFiles/subst_ost_config.dir/build.make scripts/CMakeFiles/subst_ost_config.dir/build
make  -f scripts/CMakeFiles/subst_dng.dir/build.make scripts/CMakeFiles/subst_dng.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/scripts /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts/CMakeFiles/subst_ost.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -DINPUT_FILE=/build/reproducible-path/openstructure-2.9.0/scripts/ost_config.in -DOUT_FILE=ost_config -DBUILD_TYPE=Release -DPython_EXECUTABLE=/usr/bin/python3 -DPython_VERSION=3.12.7 -DLIBDIR=lib -DLIBEXEC_PATH=lib/openstructure/libexec -DPYTHON_MODULE_PATH=python3.12/dist-packages/ -P /build/reproducible-path/openstructure-2.9.0/cmake_support/substitute.cmake
make  -f actions/CMakeFiles/actions.dir/build.make actions/CMakeFiles/actions.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/actions /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/actions /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/actions/CMakeFiles/actions.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/scripts /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts/CMakeFiles/subst_dng.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/./init_splash.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/./init_splash.py
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/share/icons/distance_icon.png /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/distance_icon.png
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/./dssp.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./dssp.py
[  0%] Built target ost_mol_pymod
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/pymod/./antechamber.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/mm/./antechamber.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/dng/menu.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/dng/menu.py
make  -f modules/base/pymod/CMakeFiles/ost_base_pymod.dir/build.make modules/base/pymod/CMakeFiles/ost_base_pymod.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/base/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod/CMakeFiles/ost_base_pymod.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f scripts/CMakeFiles/subst_ost.dir/build.make scripts/CMakeFiles/subst_ost.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/pymod/./mat.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/seq/alg/./mat.py
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -DINPUT_FILE=/build/reproducible-path/openstructure-2.9.0/scripts/ost.in -DOUT_FILE=ost -DBUILD_TYPE=Release -DPython_EXECUTABLE=/usr/bin/python3 -DPython_VERSION=3.12.7 -DLIBDIR=lib -DLIBEXEC_PATH=lib/openstructure/libexec -DPYTHON_MODULE_PATH=python3.12/dist-packages/ -P /build/reproducible-path/openstructure-2.9.0/cmake_support/substitute.cmake
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/./superpose.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./superpose.py
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[  0%] Built target create_stage
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f scripts/CMakeFiles/subst_dng.dir/build.make scripts/CMakeFiles/subst_dng.dir/build
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/./trajectory_viewer.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/./trajectory_viewer.py
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -DINPUT_FILE=/build/reproducible-path/openstructure-2.9.0/scripts/dng.in -DOUT_FILE=dng -DBUILD_TYPE=Release -DPython_EXECUTABLE=/usr/bin/python3 -DPython_VERSION=3.12.7 -DLIBDIR=lib -DLIBEXEC_PATH=lib/openstructure/libexec -DPYTHON_MODULE_PATH=python3.12/dist-packages/ -P /build/reproducible-path/openstructure-2.9.0/cmake_support/substitute.cmake
make  -f actions/CMakeFiles/actions.dir/build.make actions/CMakeFiles/actions.dir/build
make  -f modules/geom/src/CMakeFiles/ost_geom_headers.dir/build.make modules/geom/src/CMakeFiles/ost_geom_headers.dir/depend
make  -f modules/config/CMakeFiles/ost_config_headers.dir/build.make modules/config/CMakeFiles/ost_config_headers.dir/depend
make  -f modules/base/src/CMakeFiles/ost_base_headers.dir/build.make modules/base/src/CMakeFiles/ost_base_headers.dir/depend
make  -f modules/seq/base/src/CMakeFiles/ost_seq_headers.dir/build.make modules/seq/base/src/CMakeFiles/ost_seq_headers.dir/depend
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/share/icons/find_icon.png /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/find_icon.png
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/actions && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/actions/ost-compare-ligand-structures /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/openstructure/libexec/ost-compare-ligand-structures
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/config /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/config /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/config/CMakeFiles/ost_config_headers.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src/CMakeFiles/ost_base_headers.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/geom/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src/CMakeFiles/ost_geom_headers.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/./clustalw.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./clustalw.py
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src/CMakeFiles/ost_seq_headers.dir/DependInfo.cmake "--color="
[  0%] Built target ost_seq_pymod
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/cpk_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/cpk_widget.py
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[  0%] Built target subst_ost_startup.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/./qsscoring.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./qsscoring.py
[  0%] Built target ost_mol_mm_pymod
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/base/pymod/CMakeFiles/ost_base_pymod.dir/build.make modules/base/pymod/CMakeFiles/ost_base_pymod.dir/build
[  0%] Built target ost_io_pymod
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/pymod/./renumber.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/seq/alg/./renumber.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/share/icons/information_icon.png /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/information_icon.png
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[  0%] Built target subst_ost_config
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/pymod/./settings.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/./settings.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/./helpwidget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/./helpwidget.py
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/actions && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/actions/ost-compare-structures /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/openstructure/libexec/ost-compare-structures
make  -f modules/config/CMakeFiles/ost_config_headers.dir/build.make modules/config/CMakeFiles/ost_config_headers.dir/build
make  -f modules/base/src/CMakeFiles/ost_base_headers.dir/build.make modules/base/src/CMakeFiles/ost_base_headers.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/./trajectory_analysis.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./trajectory_analysis.py
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/config && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/config/./base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./base.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/./utils.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./utils.py
[  0%] Built target ost_gui_dng_pymod
make  -f modules/geom/src/CMakeFiles/ost_geom_headers.dir/build.make modules/geom/src/CMakeFiles/ost_geom_headers.dir/build
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/export_helper/generic_property_def.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/export_helper/generic_property_def.hh
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/export_helper/vector.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/export_helper/vector.hh
make  -f modules/seq/base/src/CMakeFiles/ost_seq_headers.dir/build.make modules/seq/base/src/CMakeFiles/ost_seq_headers.dir/build
make  -f modules/info/src/CMakeFiles/ost_info_headers.dir/build.make modules/info/src/CMakeFiles/ost_info_headers.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/impl/sequence_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/impl/sequence_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/custom_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/custom_widget.py
[  0%] Built target subst_ost
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/pymod/./aaindex.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/seq/alg/./aaindex.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/pymod/./stutil.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/./stutil.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/share/icons/map_icon.png /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/map_icon.png
[  0%] Built target subst_dng
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/info/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src/CMakeFiles/ost_info_headers.dir/DependInfo.cmake "--color="
make  -f modules/mol/base/src/CMakeFiles/ost_mol_headers.dir/build.make modules/mol/base/src/CMakeFiles/ost_mol_headers.dir/depend
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/actions && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/actions/ost-compare-structures-legacy /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/openstructure/libexec/ost-compare-structures-legacy
make  -f modules/bindings/src/CMakeFiles/ost_bindings_headers.dir/build.make modules/bindings/src/CMakeFiles/ost_bindings_headers.dir/depend
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/./structure_analysis.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./structure_analysis.py
make  -f modules/conop/src/CMakeFiles/ost_conop_headers.dir/build.make modules/conop/src/CMakeFiles/ost_conop_headers.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src/CMakeFiles/ost_mol_headers.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/./table.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/./table.py
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/bindings/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/src/CMakeFiles/ost_bindings_headers.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/config && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/config/./config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./config.hh
make  -f modules/db/src/CMakeFiles/ost_db_headers.dir/build.make modules/db/src/CMakeFiles/ost_db_headers.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/conop/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src/CMakeFiles/ost_conop_headers.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/export_helper/pair_to_tuple_conv.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/export_helper/pair_to_tuple_conv.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/./naccess.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./naccess.py
make  -f modules/seq/alg/src/CMakeFiles/ost_seq_alg_headers.dir/build.make modules/seq/alg/src/CMakeFiles/ost_seq_alg_headers.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/db/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src/CMakeFiles/ost_db_headers.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/impl/sequence_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/impl/sequence_impl_fw.hh
make  -f modules/img/base/src/CMakeFiles/ost_img_headers.dir/build.make modules/img/base/src/CMakeFiles/ost_img_headers.dir/depend
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/pymod/aaindex1 /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/aaindex/aaindex1
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src/CMakeFiles/ost_seq_alg_headers.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/gradient_editor_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/gradient_editor_widget.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./def.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./def.hh
make  -f modules/img/alg/src/CMakeFiles/ost_img_alg_headers.dir/build.make modules/img/alg/src/CMakeFiles/ost_img_alg_headers.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src/CMakeFiles/ost_img_alg_headers.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/img/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src/CMakeFiles/ost_img_headers.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/pymod/./table.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/./table.py
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/share/icons/menubar_icon.png /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/menubar_icon.png
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/config && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/config/./dllexport.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./dllexport.hh
make  -f modules/info/src/CMakeFiles/ost_info_headers.dir/build.make modules/info/src/CMakeFiles/ost_info_headers.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/./hhblits.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./hhblits.py
make  -f modules/mol/base/src/CMakeFiles/ost_mol_headers.dir/build.make modules/mol/base/src/CMakeFiles/ost_mol_headers.dir/build
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/./gosty_startup.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/./gosty_startup.py
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./exc.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./exc.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/export_helper/vec_to_list_conv.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/export_helper/vec_to_list_conv.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/gradient_info_handler.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/gradient_info_handler.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/pymod/aaindex2 /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/aaindex/aaindex2
make  -f modules/bindings/src/CMakeFiles/ost_bindings_headers.dir/build.make modules/bindings/src/CMakeFiles/ost_bindings_headers.dir/build
make  -f modules/db/src/CMakeFiles/ost_db_headers.dir/build.make modules/db/src/CMakeFiles/ost_db_headers.dir/build
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/pointer_iterator.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/pointer_iterator.hh
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/bindings/src/./wrap_tmalign.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/bindings/./wrap_tmalign.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/share/icons/rigid_body_manipulator_icon.png /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/rigid_body_manipulator_icon.png
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/config && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/config/./version.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./version.hh
make  -f modules/seq/alg/src/CMakeFiles/ost_seq_alg_headers.dir/build.make modules/seq/alg/src/CMakeFiles/ost_seq_alg_headers.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/./helix_kinks.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./helix_kinks.py
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/db/src/./sqlite_wrap.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/db/./sqlite_wrap.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/pymod/./table_selector.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/./table_selector.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/impl/sequence_list_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/impl/sequence_list_impl_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_error.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_error.hh
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./alignment_opts.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./alignment_opts.hh
[  0%] Built target actions
make  -f modules/conop/src/CMakeFiles/ost_conop_headers.dir/build.make modules/conop/src/CMakeFiles/ost_conop_headers.dir/build
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/./hhblits2.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./hhblits2.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./geom.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./geom.hh
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./conop.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./conop.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/pymod/aaindex3 /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/aaindex/aaindex3
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/test_utils/compare_files.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/test_utils/compare_files.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/db/src/./sqlite_conv.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/db/./sqlite_conv.hh
make  -f modules/img/base/src/CMakeFiles/ost_img_headers.dir/build.make modules/img/base/src/CMakeFiles/ost_img_headers.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/gradient_list_model.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/gradient_list_model.py
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/atom_group.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/atom_group.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/impl/sequence_list_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/impl/sequence_list_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/./hbond.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./hbond.py
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/raster_image/raster_image.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/raster_image/raster_image.hh
make  -f modules/img/alg/src/CMakeFiles/ost_img_alg_headers.dir/build.make modules/img/alg/src/CMakeFiles/ost_img_alg_headers.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/share/icons/selection_icon.png /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/selection_icon.png
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./mat.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./mat.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_impl.hh
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./anisotropic.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./anisotropic.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/pymod/./xmlrunner.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/./xmlrunner.py
[  0%] Built target ost_config_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/db/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/db/./module_config.hh
[  0%] Built target ost_gui_pymod
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/./hhblits3.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./hhblits3.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/impl/sequence_list_iterator.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/impl/sequence_list_iterator.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./clip_alignment.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./clip_alignment.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/dispatch.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/dispatch.hh
make  -f modules/io/src/CMakeFiles/ost_io_headers.dir/build.make modules/io/src/CMakeFiles/ost_io_headers.dir/depend
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./mat2.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./mat2.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./generic_property.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./generic_property.hh
make  -f modules/mol/alg/src/CMakeFiles/ost_mol_alg_headers.dir/build.make modules/mol/alg/src/CMakeFiles/ost_mol_alg_headers.dir/depend
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./processor.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./processor.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/atom_prop.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/atom_prop.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/share/icons/show_sidebar_icon.png /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/show_sidebar_icon.png
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/io/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src/CMakeFiles/ost_io_headers.dir/DependInfo.cmake "--color="
make  -f modules/gfx/src/CMakeFiles/ost_gfx_headers.dir/build.make modules/gfx/src/CMakeFiles/ost_gfx_headers.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src/CMakeFiles/ost_mol_alg_headers.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/./lddt.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./lddt.py
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/gfx/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src/CMakeFiles/ost_gfx_headers.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/gradient_preset_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/gradient_preset_widget.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/pymod/./testutils.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/./testutils.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./sequence_list.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./sequence_list.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_impl_fw.hh
[  0%] Built target ost_seq_alg_pymod
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./mat3.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./mat3.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/atom_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/atom_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./integrity_error.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./integrity_error.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./conservation.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./conservation.hh
make  -f modules/gui/src/CMakeFiles/ost_gui_headers.dir/build.make modules/gui/src/CMakeFiles/ost_gui_headers.dir/depend
[  0%] Built target ost_bindings_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/db/src/./linear_indexer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/db/./linear_indexer.hh
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/gui/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/CMakeFiles/ost_gui_headers.dir/DependInfo.cmake "--color="
make  -f modules/mol/mm/src/CMakeFiles/ost_mol_mm_headers.dir/build.make modules/mol/mm/src/CMakeFiles/ost_mol_mm_headers.dir/depend
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/alg/src/CMakeFiles/ost_mol_alg_headers.dir/build.make modules/mol/alg/src/CMakeFiles/ost_mol_alg_headers.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/./blast.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./blast.py
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src/CMakeFiles/ost_mol_mm_headers.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./auto_correlate.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./auto_correlate.hh
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./svd_superpose.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./svd_superpose.hh
make  -f modules/io/src/CMakeFiles/ost_io_headers.dir/build.make modules/io/src/CMakeFiles/ost_io_headers.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/./qsscore.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./qsscore.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/share/icons/site_icon.png /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/site_icon.png
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./amino_acids.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./amino_acids.hh
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/chemdict_parser.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/chemdict_parser.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./sequence_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./sequence_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/cmake -E copy_if_different __init__.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/__init__.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/atom_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/atom_impl_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./invalid_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./invalid_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_handle.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/gui/src/CMakeFiles/ost_gui_headers.dir/build.make modules/gui/src/CMakeFiles/ost_gui_headers.dir/build
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/hsc_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/hsc_widget.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/db/src/./binary_container.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/db/./binary_container.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./module_config.hh
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./mat4.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./mat4.hh
make  -f modules/gfx/src/CMakeFiles/ost_gfx_headers.dir/build.make modules/gfx/src/CMakeFiles/ost_gfx_headers.dir/build
make  -f modules/mol/mm/src/CMakeFiles/ost_mol_mm_headers.dir/build.make modules/mol/mm/src/CMakeFiles/ost_mol_mm_headers.dir/build
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/map_iso_gen.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/map_iso_gen.hh
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./forcefield.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./forcefield.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/share/icons/split_icon.png /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/split_icon.png
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/star_parser.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/star_parser.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/chain_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/chain_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/./cadscore.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./cadscore.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./contact_prediction_score.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./contact_prediction_score.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./alignment_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./alignment_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./diag.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./diag.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./clear.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./clear.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_group.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_group.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./sec_structure_segments.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./sec_structure_segments.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./ptr_observer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./ptr_observer.hh
[  0%] Built target ost_base_pymod
make  -f modules/config/CMakeFiles/ost_config.dir/build.make modules/config/CMakeFiles/ost_config.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/config /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/config /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/config/CMakeFiles/ost_config.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/config/CMakeFiles/ost_config.dir/build.make modules/config/CMakeFiles/ost_config.dir/build
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'modules/config/CMakeFiles/ost_config.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./local_dist_diff_test.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./local_dist_diff_test.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/map_iso_gen_s.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/map_iso_gen_s.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./contact_weight_matrix.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./contact_weight_matrix.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/share/icons/warning_icon.png /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/warning_icon.png
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/db/src/./extract_data_helper.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/db/./extract_data_helper.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/immutable_gradient_info_handler.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/immutable_gradient_info_handler.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./log.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./log.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool_option_group.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_option_group.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/star_writer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/star_writer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./ff_reader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./ff_reader.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/chain_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/chain_impl_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/./kclust.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./kclust.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./vec.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./vec.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./clip_min_max.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./clip_min_max.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/./scoring.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./scoring.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./model_check.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./model_check.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_base_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_base_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_item.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_item.hh
[  0%] Built target ost_config
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool_options.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_options.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/immutable_preset_info_handler.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/immutable_preset_info_handler.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./distance_test_common.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./distance_test_common.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./log_sink.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./log_sink.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/share && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/share/icons/refresh.png /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/gui/icons/refresh.png
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./distance_map.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./distance_map.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/connector_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/connector_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./buildingblock.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./buildingblock.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./conjugate.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./conjugate.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./vec2.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./vec2.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/mmcif_reader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/mmcif_reader.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./sequence_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./sequence_op.hh
[  0%] Built target ost_db_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_def.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_def.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/map_iso_gen_s.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/map_iso_gen_s.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/init_inspector.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/init_inspector.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/./ialign.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./ialign.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./distance_rmsd_test.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./distance_rmsd_test.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool_bar.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_bar.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./profile.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./profile.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./heuristic.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./heuristic.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/./chain_mapping.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./chain_mapping.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/connector_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/connector_impl_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./entropy.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./entropy.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./convolute.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./convolute.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./block_modifiers.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./block_modifiers.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/map_iso_spec.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/map_iso_spec.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_factory.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_factory.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./vec3.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./vec3.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./aligned_region.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./aligned_region.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/inspector_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/inspector_widget.py
[  0%] Built target scene_icons
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/selection_tool.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/selection_tool.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./global_align.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./global_align.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/dihedral.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/dihedral.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/./mmseqs2.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./mmseqs2.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/mmcif_info.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/mmcif_info.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./vec4.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./vec4.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./aligned_column.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./aligned_column.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./superpose_frames.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./superpose_frames.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/./stereochemistry.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./stereochemistry.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./dyn_cast.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./dyn_cast.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/measure_tool.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/measure_tool.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/map_level_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/map_level_widget.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/map_octree.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/map_octree.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./gromacs_block_modifiers.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./gromacs_block_modifiers.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_path.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_path.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./compound.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./compound.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./vecmat_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./vecmat_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./ins_del.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./ins_del.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/entity_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/entity_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_frequency_domain.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_frequency_domain.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./correlate.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./correlate.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./filter_clashes.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./filter_clashes.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/octree_isocont.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/octree_isocont.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool_option.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_option.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/mmcif_writer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/mmcif_writer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./aligned_column_iterator.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./aligned_column_iterator.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/./dockq.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./dockq.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/preset.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/preset.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./stdint.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./stdint.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/./dockq.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./dockq.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./vecmat2_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./vecmat2_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./local_align.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./local_align.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/io_profile.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/io_profile.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_half_frequency_domain.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_half_frequency_domain.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./construct_cbeta.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./construct_cbeta.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/entity_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/entity_impl_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./heuristic_block_modifiers.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./heuristic_block_modifiers.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_set.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_set.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/cartoon_renderer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/cartoon_renderer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./cross_correlate.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./cross_correlate.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./compound_lib.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./compound_lib.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool_manager.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_manager.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./invalid_sequence.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./invalid_sequence.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/remote.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/remote.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/fragment_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/fragment_impl.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./merge_pairwise_alignments.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./merge_pairwise_alignments.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./interaction.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./interaction.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./stdint_msc.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./stdint_msc.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_visitor.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_visitor.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./vecmat3_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./vecmat3_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/./contact_score.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./contact_score.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./clash_score.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./clash_score.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/dcd_io.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/dcd_io.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/custom_renderer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/custom_renderer.hh
[  0%] Built target ost_bindings_pymod
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./views_from_sequences.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./views_from_sequences.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool_options_widget.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_options_widget.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/fragment_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/fragment_impl_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./density_slice.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./density_slice.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_spatial_domain.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_spatial_domain.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./settings.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./settings.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./range.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./range.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/preset_editor_list_model.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/preset_editor_list_model.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/./ligand_scoring.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./ligand_scoring.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./rule_based.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./rule_based.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_crd_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_crd_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_verbose_visitor.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_verbose_visitor.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./trajectory_analysis.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./trajectory_analysis.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./vecmat4_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./vecmat4_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/query_ast.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/query_ast.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./dft.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./dft.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./profile_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./profile_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_visitor.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_visitor.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/cpk_renderer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/cpk_renderer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./pair_subst_weight_matrix.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./pair_subst_weight_matrix.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./simulation.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./simulation.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/manipulator.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/manipulator.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./structure_analysis.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./structure_analysis.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./minimal_compound_lib.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./minimal_compound_lib.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/./ligand_scoring_base.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./ligand_scoring_base.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./fft.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./fft.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/preset_editor_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/preset_editor_widget.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./circular_iterator.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./circular_iterator.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/query_ast_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/query_ast_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./modeller.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./modeller.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./item_type.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./item_type.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_algorithm.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_algorithm.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./consistency_checks.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./consistency_checks.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./fftw_helper.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./fftw_helper.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_pqr_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_pqr_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/debug_renderer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/debug_renderer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./compound_lib_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./compound_lib_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./units.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./units.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./semiglobal_align.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./semiglobal_align.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/./ligand_scoring_scrmsd.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./ligand_scoring_scrmsd.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./constants.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./constants.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./fill.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./fill.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./observer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./observer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_visitor_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_visitor_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool_options_win.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_options_win.hh
[  0%] Built target ost_seq_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/simple_renderer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/simple_renderer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/preset_info_handler.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/preset_info_handler.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./geom_info_conversion.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./geom_info_conversion.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./filter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./filter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./sequence_identity.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./sequence_identity.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/query_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/query_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./ring_finder.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./ring_finder.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./message.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./message.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_mae_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_mae_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./composite.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./pdbize.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./pdbize.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/./ligand_scoring_lddtpli.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./ligand_scoring_lddtpli.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./state_extractor.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./state_extractor.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./sequence_similarity.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./sequence_similarity.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/preset_list_model.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/preset_list_model.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./fourier_filters.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./fourier_filters.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/query_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/query_impl_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/mouse_event.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/mouse_event.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./composite2.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite2.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./platform.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./platform.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/index.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/index.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/sline_renderer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/sline_renderer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./system_creator.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./system_creator.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_mmcif_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_mmcif_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./subst_weight_matrix.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./subst_weight_matrix.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/./bb_lddt.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./bb_lddt.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./string_ref.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./string_ref.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./item_type_cast.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./item_type_cast.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./composite3.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite3.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/preset_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/preset_widget.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./gaussian_gradient_magnitude.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./gaussian_gradient_magnitude.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/map_tool.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/map_tool.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./adjacency_bitmap.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./adjacency_bitmap.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/residue_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/residue_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./topology_creator.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./topology_creator.hh
[  0%] Built target ost_conop_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/type_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/type_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./variance_map.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./variance_map.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/stereo_data.json /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/stereo_data.json
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./pod_vector.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./pod_vector.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/trace_renderer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/trace_renderer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_handler.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/align_properties_painter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/align_properties_painter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./composite_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/render_mode_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/render_mode_widget.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/value_holder.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/value_holder.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./index.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./index.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./data/default_contact_weight_matrix.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./default_contact_weight_matrix.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./gaussian.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./gaussian.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./consistency_checks.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./consistency_checks.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/pdb_reader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/pdb_reader.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/line_trace_renderer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/line_trace_renderer.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./fixed_string.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./fixed_string.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/residue_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/residue_impl_fw.hh
[  0%] Built target ost_info_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/base_row.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/base_row.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./algorithm.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./algorithm.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./data/default_pair_subst_weight_matrix.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./default_pair_subst_weight_matrix.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./topology.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./topology.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/render_op.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/render_op.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./gaussian_laplacian.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./gaussian_laplacian.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./composite2_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite2_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_pdb_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_pdb_handler.hh
[  0%] Built target ost_mol_alg_pymod
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./tri_matrix.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./tri_matrix.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/backbone_trace.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/backbone_trace.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./contact_overlap.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./contact_overlap.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/background_painter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/background_painter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./circle_mask.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./circle_mask.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./highest_peak_search_3d.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./highest_peak_search_3d.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/surface_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/surface_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./hmm_pseudo_counts.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./hmm_pseudo_counts.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./steep.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./steep.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./composite3_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite3_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/render_options_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/render_options_widget.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/pdb_writer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/pdb_writer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/conservation_painter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/conservation_painter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./composite_mask.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./composite_mask.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./boost_filesystem_helper.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./boost_filesystem_helper.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./domain_find.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./domain_find.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/entity_detail.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_detail.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./histogram.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./histogram.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./hmm_score.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./hmm_score.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/surface_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/surface_impl_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./aligned_cuboid.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./aligned_cuboid.hh
[  0%] Built target ost_mol_mm_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./data_algorithm.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./data_algorithm.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/painter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/painter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./similarity_matrix.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./similarity_matrix.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/scene_observer_impl.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/scene_observer_impl.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/torsion_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/torsion_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./line_iterator.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./line_iterator.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./vec_mat_predicates.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./vec_mat_predicates.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./wrap_parasail.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./wrap_parasail.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./paged_array.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./paged_array.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_sdf_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_sdf_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/entity_renderer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/sdf_reader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/sdf_reader.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/scene_selection_helper.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/scene_selection_helper.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/torsion_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/torsion_impl_fw.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/secstr_row.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/secstr_row.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./quat.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./quat.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/trace_renderer_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/trace_renderer_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./local_sigma_threshold.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./local_sigma_threshold.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./accessibility.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./accessibility.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./data_observer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./data_observer.hh
[  0%] Built target ost_seq_alg_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/seq_secstr_painter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/seq_secstr_painter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/simple_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/simple_widget.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./mask_image.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./mask_image.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./sec_struct.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./sec_struct.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./atom_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./atom_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/sdf_writer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/sdf_writer.hh
[  0%] Built target ost_base_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/connect_renderer_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/connect_renderer_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./transform.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./transform.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./data_types.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./data_types.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/sline_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/sline_widget.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/save_entity.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/save_entity.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/seq_selection_painter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/seq_selection_painter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./atom_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./atom_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./point_cloud.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./point_cloud.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./data.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./data.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./nonstandard.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./nonstandard.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./negate.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./negate.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/toolbar_options_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/toolbar_options_widget.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/load_entity.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/load_entity.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/mapped_property.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/mapped_property.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./molck.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./molck.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./atom_view.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./atom_view.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/entity_renderer_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/seq_text_painter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/seq_text_painter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/surface_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/surface_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./normalizer_factory.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./normalizer_factory.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./debug.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./debug.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/trace_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/trace_widget.py
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./bond_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./bond_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_delegate.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_delegate.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./norm.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./norm.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/tabulated_trig.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/tabulated_trig.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./find_membrane.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./find_membrane.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/load_surface.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/load_surface.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/tube_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/tube_widget.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./dllexport.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./dllexport.hh
[  0%] Built target ost_geom_headers
make  -f modules/geom/src/CMakeFiles/ost_geom.dir/build.make modules/geom/src/CMakeFiles/ost_geom.dir/depend
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./normalizer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./normalizer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_model.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_model.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./bond_table.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./bond_table.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./entity_to_density.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./entity_to_density.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/fast_spheres.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/fast_spheres.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/surface_io_msms_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/surface_io_msms_handler.hh
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/geom/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src/CMakeFiles/ost_geom.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/uniform_color_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/uniform_color_widget.py
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/geom/src/CMakeFiles/ost_geom.dir/build.make modules/geom/src/CMakeFiles/ost_geom.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/visibility_op.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/visibility_op.py
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_row.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_row.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./norm_linear.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./norm_linear.hh
[  0%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/vecmat3_op.cc.o
[  0%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/composite3_op.cc.o
[  0%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/vec3.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./chain_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./chain_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/pdb_str.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/pdb_str.hh
[  0%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/quat.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./extent_iterator.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./extent_iterator.hh
[  0%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/composite2_op.cc.o
[  0%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/mat4.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/quat.cc.o -MF CMakeFiles/ost_geom.dir/quat.cc.o.d -o CMakeFiles/ost_geom.dir/quat.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/src/quat.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./biounit.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./biounit.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/composite3_op.cc.o -MF CMakeFiles/ost_geom.dir/composite3_op.cc.o.d -o CMakeFiles/ost_geom.dir/composite3_op.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/src/composite3_op.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/render_options.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/render_options.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/line_trace_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/line_trace_widget.py
[  0%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/vecmat4_op.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/mat4.cc.o -MF CMakeFiles/ost_geom.dir/mat4.cc.o.d -o CMakeFiles/ost_geom.dir/mat4.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/src/mat4.cc
[  0%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/mat2.cc.o
[  1%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/composite2.cc.o
[  1%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/mat3.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/vec3.cc.o -MF CMakeFiles/ost_geom.dir/vec3.cc.o.d -o CMakeFiles/ost_geom.dir/vec3.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/src/vec3.cc
[  1%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/composite3.cc.o
[  1%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/vecmat2_op.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/vecmat3_op.cc.o -MF CMakeFiles/ost_geom.dir/vecmat3_op.cc.o.d -o CMakeFiles/ost_geom.dir/vecmat3_op.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/src/vecmat3_op.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/mat2.cc.o -MF CMakeFiles/ost_geom.dir/mat2.cc.o.d -o CMakeFiles/ost_geom.dir/mat2.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/src/mat2.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/mat3.cc.o -MF CMakeFiles/ost_geom.dir/mat3.cc.o.d -o CMakeFiles/ost_geom.dir/mat3.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/src/mat3.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/vecmat2_op.cc.o -MF CMakeFiles/ost_geom.dir/vecmat2_op.cc.o.d -o CMakeFiles/ost_geom.dir/vecmat2_op.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/src/vecmat2_op.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/vecmat4_op.cc.o -MF CMakeFiles/ost_geom.dir/vecmat4_op.cc.o.d -o CMakeFiles/ost_geom.dir/vecmat4_op.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/src/vecmat4_op.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/composite2.cc.o -MF CMakeFiles/ost_geom.dir/composite2.cc.o.d -o CMakeFiles/ost_geom.dir/composite2.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/src/composite2.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/composite3.cc.o -MF CMakeFiles/ost_geom.dir/composite3.cc.o.d -o CMakeFiles/ost_geom.dir/composite3.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/src/composite3.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./extent_mask.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./extent_mask.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/composite2_op.cc.o -MF CMakeFiles/ost_geom.dir/composite2_op.cc.o.d -o CMakeFiles/ost_geom.dir/composite2_op.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/src/composite2_op.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_search_bar.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_search_bar.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./chain_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./chain_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./norm_log.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./norm_log.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/line_render_options.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/line_render_options.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/sdf_str.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/sdf_str.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./gdt.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./gdt.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/wireframe_widget.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/wireframe_widget.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./chain_view.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./chain_view.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./extent.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./extent.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_table_view.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_table_view.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/custom_render_options.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/custom_render_options.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/mmcif_str.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/mmcif_str.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./chain_type.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./chain_type.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./norm_od.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./norm_od.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/query_editor.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/query_editor.py
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/cpk_render_options.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/cpk_render_options.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./chem_class.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./chem_class.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./image_factory.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./image_factory.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_viewer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_viewer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/stereochemical_params_reader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/stereochemical_params_reader.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./chem_type.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./chem_type.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[  1%] Built target ost_mol_alg_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/tick_painter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/tick_painter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./image_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./image_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./coord_group.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./coord_group.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./power_spectrum.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./power_spectrum.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/simple_render_options.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/simple_render_options.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/omf.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/omf.hh
[  1%] Built target ost_gui_scene_pymod
[  1%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/transform.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/title_row.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/title_row.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/transform.cc.o -MF CMakeFiles/ost_geom.dir/transform.cc.o.d -o CMakeFiles/ost_geom.dir/transform.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/src/transform.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/sline_render_options.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/sline_render_options.hh
[  1%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/aligned_cuboid.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/aligned_cuboid.cc.o -MF CMakeFiles/ost_geom.dir/aligned_cuboid.cc.o.d -o CMakeFiles/ost_geom.dir/aligned_cuboid.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/src/aligned_cuboid.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/load_map.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/load_map.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_df3_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_df3_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/image_format.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/image_format.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/alignment_view_object.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/alignment_view_object.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./randomize.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./randomize.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./image_handle_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./image_handle_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./coord_source.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./coord_source.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/line_trace_render_options.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/line_trace_render_options.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/base_view_object.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/base_view_object.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./image_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./image_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./in_mem_coord_source.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./in_mem_coord_source.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_dx_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_dx_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/cartoon_render_options.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/cartoon_render_options.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./smooth_mask_image.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./smooth_mask_image.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./coord_frame.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./coord_frame.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_view_object.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_view_object.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./image_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./image_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_spi_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_spi_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/trace_render_options.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/trace_render_options.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./editor_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./editor_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./image_list.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./image_list.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/main_thread_runner.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/main_thread_runner.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_situs_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_situs_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./stat.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./stat.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./image_state_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./image_state_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/color_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/color_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/output_redirector.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/output_redirector.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./stat_accumulator.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./stat_accumulator.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./editor_type_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./editor_type_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./image_state.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./image_state.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/by_element_color_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/by_element_color_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./stat_min_max.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./stat_min_max.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/by_chain_color_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/by_chain_color_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/completer_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/completer_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./mol.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./mol.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_mrc_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_mrc_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./image.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./image.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./threshold.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./threshold.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/dir_model.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/dir_model.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./entity_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./inverted_mask.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./inverted_mask.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/uniform_color_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/uniform_color_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_dat_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_dat_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/gutter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/gutter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./transcendentals.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./transcendentals.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./entity_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./map.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./map.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/gradient_color_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/gradient_color_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/path_completer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/path_completer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_ipl_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_ipl_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./transform.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./transform.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./entity_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./mask_base_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./mask_base_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/entity_view_color_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/entity_view_color_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_jpk_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_jpk_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_context_parser.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_context_parser.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./transform_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./transform_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./entity_observer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_observer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/basic_gradient_color_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/basic_gradient_color_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./mask_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./mask_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_completer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_completer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_nanoscope_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_nanoscope_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./entity_observer_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_observer_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./alg_transform.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./alg_transform.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/gradient_level_color_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/gradient_level_color_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./mask_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./mask_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_shell.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_shell.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_png_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_png_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./entity_property_mapper.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_property_mapper.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/map_handle_color_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/map_handle_color_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_dm3_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_dm3_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./alg_mirror.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./alg_mirror.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./mask_visitor.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./mask_visitor.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_shell_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_shell_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./entity_view.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_view.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./render_pass.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./render_pass.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_tiff_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_tiff_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./mask.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./mask.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./alg_shift.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./alg_shift.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_shell_widget.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_shell_widget.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./bitmap_io.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./bitmap_io.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./discrete_shrink.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./discrete_shrink.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./entity_visitor.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_visitor.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/tiff_util.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/tiff_util.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./collada_exporter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./collada_exporter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_tokenizer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_tokenizer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/jpk_util.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/jpk_util.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./normalizer_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./normalizer_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./entity_visitor_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_visitor_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./transformation_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./transformation_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./color.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./color.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./transformations.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./transformations.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./entity.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./entity.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_syntax_highlighter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_syntax_highlighter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./handle_type_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./handle_type_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/sequence_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/seq/sequence_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./normalizer_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./normalizer_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./fractional_shift.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./fractional_shift.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/text_logger.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/text_logger.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./entity_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./entity_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/fasta_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/seq/fasta_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./ics_editor.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./ics_editor.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./null_data.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./null_data.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gl_helper.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gl_helper.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./polar.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./polar.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/pir_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/seq/pir_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_interpreter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_interpreter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./not_connected_error.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./not_connected_error.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./observable.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./observable.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gfx.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./line_average.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./line_average.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/promod_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/seq/promod_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./property_id.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./property_id.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_interpreter_worker.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_interpreter_worker.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./paste_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./paste_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./query.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./query.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/profile_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/seq/profile_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gfx_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./rscrosscorr.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./rscrosscorr.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./peak.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./peak.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_shell_text_document_layout.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_shell_text_document_layout.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./query_error.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./query_error.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/hhm_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/seq/hhm_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./phase.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./phase.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gfx_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_node.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/shell_history.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/shell_history.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./query_state.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./query_state.hh
[  1%] Built target ost_img_alg_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/pssm_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/seq/pssm_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/state_machine.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/state_machine.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gfx_node_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_node_fw.hh
[  1%] Building CXX object modules/geom/src/CMakeFiles/ost_geom.dir/point_cloud.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./physical_units.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./physical_units.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GEOM -Dost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/src/CMakeFiles/ost_geom.dir/point_cloud.cc.o -MF CMakeFiles/ost_geom.dir/point_cloud.cc.o.d -o CMakeFiles/ost_geom.dir/point_cloud.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/src/point_cloud.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./residue_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./residue_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gfx_node_visitor.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_node_visitor.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/clustal_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/seq/clustal_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gfx_object_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_object_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/state.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/state.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./pixel_sampling.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./pixel_sampling.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gfx_object.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_object.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./residue_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./residue_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/load.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/seq/load.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./point_list.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./point_list.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/transition.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/transition.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gfx_object_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_object_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/save.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/seq/save.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./residue_prop.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./residue_prop.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./point.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./point.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gfx_prim.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_prim.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/transition_guard.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/transition_guard.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./binary_data_sink.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./binary_data_sink.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./polygon_mask.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./polygon_mask.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./symmetry_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./symmetry_node.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./residue_view.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./residue_view.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gfx_test_object.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_test_object.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/button_bar.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/button_bar.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./io_manager.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./io_manager.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./glwin_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./glwin_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./progress.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./progress.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./input.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./input.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./sec_structure.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./sec_structure.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/drop_box.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/drop_box.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./prim_list.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./prim_list.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./binary_data_source.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./binary_data_source.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./size.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./size.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/panel_bar.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/panel_bar.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./spatial_organizer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./spatial_organizer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./scene.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./scene.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./surface.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./surface.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/panel_manager.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/panel_manager.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./surface_builder.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./surface_builder.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./selection.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./selection.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./spherical_mask.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./spherical_mask.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./builder.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./builder.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/bottom_bar.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/bottom_bar.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./surface_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./surface_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./surface.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./surface.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./container_serialization.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./container_serialization.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./util.cc /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./util.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./texture.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./texture.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/button_box.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/button_box.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./swap_util.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./swap_util.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./surface_prop.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./surface_prop.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./util.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./util.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./vertex_array.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./vertex_array.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/event_button.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/event_button.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./io_utils.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./io_utils.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./io_exception.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./io_exception.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./torsion_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./torsion_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./value_util.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./value_util.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./convert.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./convert.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./vertex_array_helper.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./vertex_array_helper.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/panel_widget_container.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/panel_widget_container.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./converting_streams.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./converting_streams.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./transfer_connectivity.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./transfer_connectivity.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./vecmat.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./vecmat.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./formatted_line.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./formatted_line.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/panel_bar_widget_holder.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/panel_bar_widget_holder.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./scene_observer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./scene_observer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/chemdict_parser.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./chemdict_parser.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/side_bar.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/side_bar.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/star_parser.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./star_parser.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./query_view_wrapper.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./query_view_wrapper.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/splitter_panel_bar.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/splitter_panel_bar.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./mask_info_convert.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./mask_info_convert.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/star_writer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./star_writer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gl_include.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gl_include.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/mmcif_reader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./mmcif_reader.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./view_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./view_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/mmcif_info.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./mmcif_info.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./glext_include.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./glext_include.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/tabbed_panel_bar.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/tabbed_panel_bar.hh
[  1%] Built target ost_img_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/mmcif_writer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./mmcif_writer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./view_type_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./view_type_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./render_mode.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./render_mode.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/context_menu.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/context_menu.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/io_profile.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./io_profile.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./view_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./view_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/dcd_io.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./dcd_io.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./material.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./material.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/current_selection_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/current_selection_node.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gradient.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gradient.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./xcs_editor.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./xcs_editor.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/entity_io_crd_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_crd_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/custom_part_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/custom_part_node.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gradient_manager.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gradient_manager.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/entity_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/entity_node.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/entity_io_pqr_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_pqr_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./bounding_box.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./bounding_box.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/entity_part_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/entity_part_node.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./transform.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./transform.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/entity_io_mae_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_mae_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./primitives.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./primitives.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/gfx_scene_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/gfx_scene_node.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/label_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/label_node.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/entity_io_mmcif_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_mmcif_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/root_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/root_node.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./povray_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./povray_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/entity_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/render_mode_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/render_mode_node.hh
[  1%] Built target ost_mol_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./povray.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./povray.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/pdb_reader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./pdb_reader.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/render_modes_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/render_modes_node.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./exporter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./exporter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/entity_io_pdb_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_pdb_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./exporter_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./exporter_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/scene_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/scene_node.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/pdb_writer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./pdb_writer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gost_exporter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gost_exporter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/scene_win.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/scene_win.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/scene_win_model.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/scene_win_model.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./color_ops/map_handle_color_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./map_handle_color_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/entity_io_sdf_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_sdf_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/messages/message_widget.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/messages/message_widget.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./map_iso.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./map_iso.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/messages/message_box_widget.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/messages/message_box_widget.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/sdf_reader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./sdf_reader.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./map_slab.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./map_slab.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/messages/log_reader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/messages/log_reader.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/sdf_writer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./sdf_writer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/argand.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/argand.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./map_iso_prop.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./map_iso_prop.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/save_entity.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./save_entity.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/data_viewer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/data_viewer.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/load_entity.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./load_entity.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/data_viewer_panel.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/data_viewer_panel.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/surface_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./surface_io_handler.hh
[  1%] Built target ost_gfx_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/data_viewer_panel_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/data_viewer_panel_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/load_surface.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./load_surface.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/surface_io_msms_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./surface_io_msms_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/draw_overlay.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/draw_overlay.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/pdb_str.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./pdb_str.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/drawing_functions.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/drawing_functions.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/sdf_str.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./sdf_str.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/mmcif_str.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./mmcif_str.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/fft_panel.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/fft_panel.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/stereochemical_params_reader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./stereochemical_params_reader.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/info_panel.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/info_panel.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/omf.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./omf.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/img2qt.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/img2qt.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./seq/sequence_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./sequence_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/mask_overlay.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/mask_overlay.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/null_overlay.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/null_overlay.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./seq/fasta_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./fasta_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/overlay.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./seq/pir_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./pir_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/overlay_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./seq/promod_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./promod_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/overlay_base_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_base_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./seq/profile_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./profile_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/overlay_manager.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_manager.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./seq/hhm_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./hhm_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/overlay_manager_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_manager_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./seq/pssm_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./pssm_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/overlay_manager_gui.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_manager_gui.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./seq/clustal_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./clustal_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/overlay_manager_observer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_manager_observer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./seq/load.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./load.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/pointlist_overlay.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/pointlist_overlay.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./seq/save.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./save.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/load_map.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./load_map.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/pointlist_overlay_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/pointlist_overlay_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_df3_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_df3_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/strategies.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/strategies.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/strategies_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/strategies_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/image_format.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./image_format.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/viewer_normalizer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/viewer_normalizer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_dx_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_dx_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./file_browser.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./file_browser.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_spi_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_spi_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./file_type_dialog.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./file_type_dialog.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_situs_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_situs_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./file_viewer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./file_viewer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_mrc_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_mrc_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./gl_canvas.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./gl_canvas.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_dat_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_dat_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./gl_win.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./gl_win.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_ipl_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_ipl_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./scene_menu.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./scene_menu.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_jpk_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_jpk_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./gosty_app.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./gosty_app.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./admin.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./admin.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_nanoscope_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_nanoscope_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./main.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./main.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./main_area.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./main_area.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_png_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_png_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_dm3_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_dm3_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./perspective.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./perspective.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_tiff_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_tiff_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/tiff_util.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./tiff_util.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/jpk_util.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./jpk_util.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[  1%] Built target ost_io_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./scene_selection.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./scene_selection.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./main_window.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./main_window.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./dock_widget.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./dock_widget.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./dock_widget.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./dock_widget.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./thin_splitter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./thin_splitter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./widget.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./widget.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./widget_geom_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./widget_geom_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./widget_pool.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./widget_pool.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./widget_registry.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./widget_registry.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./widget_state_saver.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./widget_state_saver.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./file_loader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./file_loader.hh
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[  1%] Built target ost_gui_headers
[  1%] Linking CXX shared library ../../../stage/lib/libost_geom.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_geom.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/ost_geom.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_geom.so.2.9 -o ../../../stage/lib/libost_geom.so.2.9.0 CMakeFiles/ost_geom.dir/mat2.cc.o CMakeFiles/ost_geom.dir/mat3.cc.o CMakeFiles/ost_geom.dir/mat4.cc.o CMakeFiles/ost_geom.dir/vec3.cc.o CMakeFiles/ost_geom.dir/vecmat2_op.cc.o CMakeFiles/ost_geom.dir/vecmat3_op.cc.o CMakeFiles/ost_geom.dir/vecmat4_op.cc.o CMakeFiles/ost_geom.dir/composite2.cc.o CMakeFiles/ost_geom.dir/composite3.cc.o CMakeFiles/ost_geom.dir/composite2_op.cc.o CMakeFiles/ost_geom.dir/composite3_op.cc.o CMakeFiles/ost_geom.dir/quat.cc.o CMakeFiles/ost_geom.dir/transform.cc.o CMakeFiles/ost_geom.dir/aligned_cuboid.cc.o CMakeFiles/ost_geom.dir/point_cloud.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E cmake_symlink_library ../../../stage/lib/libost_geom.so.2.9.0 ../../../stage/lib/libost_geom.so.2.9 ../../../stage/lib/libost_geom.so
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_vec3.cc.o -MF CMakeFiles/_ost_geom.dir/export_vec3.cc.o.d -o CMakeFiles/_ost_geom.dir/export_vec3.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/pymod/export_vec3.cc
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_vec4.cc.o -MF CMakeFiles/_ost_geom.dir/export_vec4.cc.o.d -o CMakeFiles/_ost_geom.dir/export_vec4.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/pymod/export_vec4.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_BASE -Dost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/src/CMakeFiles/ost_base.dir/profile.cc.o -MF CMakeFiles/ost_base.dir/profile.cc.o.d -o CMakeFiles/ost_base.dir/profile.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/base/src/profile.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_vecmat2_op.cc.o -MF CMakeFiles/_ost_geom.dir/export_vecmat2_op.cc.o.d -o CMakeFiles/_ost_geom.dir/export_vecmat2_op.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/pymod/export_vecmat2_op.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_BASE -Dost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/src/CMakeFiles/ost_base.dir/platform.cc.o -MF CMakeFiles/ost_base.dir/platform.cc.o.d -o CMakeFiles/ost_base.dir/platform.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/base/src/platform.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_vec2.cc.o -MF CMakeFiles/_ost_geom.dir/export_vec2.cc.o.d -o CMakeFiles/_ost_geom.dir/export_vec2.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/pymod/export_vec2.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_BASE -Dost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/src/CMakeFiles/ost_base.dir/log.cc.o -MF CMakeFiles/ost_base.dir/log.cc.o.d -o CMakeFiles/ost_base.dir/log.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/base/src/log.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_BASE -Dost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/src/CMakeFiles/ost_base.dir/log_sink.cc.o -MF CMakeFiles/ost_base.dir/log_sink.cc.o.d -o CMakeFiles/ost_base.dir/log_sink.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/base/src/log_sink.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/wrap_geom.cc.o -MF CMakeFiles/_ost_geom.dir/wrap_geom.cc.o.d -o CMakeFiles/_ost_geom.dir/wrap_geom.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/pymod/wrap_geom.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_BASE -Dost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/src/CMakeFiles/ost_base.dir/message.cc.o -MF CMakeFiles/ost_base.dir/message.cc.o.d -o CMakeFiles/ost_base.dir/message.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/base/src/message.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_vecmat3_op.cc.o -MF CMakeFiles/_ost_geom.dir/export_vecmat3_op.cc.o.d -o CMakeFiles/_ost_geom.dir/export_vecmat3_op.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/pymod/export_vecmat3_op.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_BASE -Dost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/src/CMakeFiles/ost_base.dir/test_utils/compare_files.cc.o -MF CMakeFiles/ost_base.dir/test_utils/compare_files.cc.o.d -o CMakeFiles/ost_base.dir/test_utils/compare_files.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/base/src/test_utils/compare_files.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_mat2.cc.o -MF CMakeFiles/_ost_geom.dir/export_mat2.cc.o.d -o CMakeFiles/_ost_geom.dir/export_mat2.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/pymod/export_mat2.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_BASE -Dost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/src/CMakeFiles/ost_base.dir/boost_filesystem_helper.cc.o -MF CMakeFiles/ost_base.dir/boost_filesystem_helper.cc.o.d -o CMakeFiles/ost_base.dir/boost_filesystem_helper.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/base/src/boost_filesystem_helper.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_BASE -Dost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/src/CMakeFiles/ost_base.dir/string_ref.cc.o -MF CMakeFiles/ost_base.dir/string_ref.cc.o.d -o CMakeFiles/ost_base.dir/string_ref.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/base/src/string_ref.cc
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_mat3.cc.o -MF CMakeFiles/_ost_geom.dir/export_mat3.cc.o.d -o CMakeFiles/_ost_geom.dir/export_mat3.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/pymod/export_mat3.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_geom_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/geom/pymod/CMakeFiles/_ost_geom.dir/export_mat4.cc.o -MF CMakeFiles/_ost_geom.dir/export_mat4.cc.o.d -o CMakeFiles/_ost_geom.dir/export_mat4.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/pymod/export_mat4.cc
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_INFO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_info_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/info/src/CMakeFiles/ost_info.dir/info_group.cc.o -MF CMakeFiles/ost_info.dir/info_group.cc.o.d -o CMakeFiles/ost_info.dir/info_group.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/info/src/info_group.cc
[  5%] Building CXX object modules/info/src/CMakeFiles/ost_info.dir/info_item.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_INFO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_info_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/info/src/CMakeFiles/ost_info.dir/info_item.cc.o -MF CMakeFiles/ost_info.dir/info_item.cc.o.d -o CMakeFiles/ost_info.dir/info_item.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/info/src/info_item.cc
[  5%] Building CXX object modules/info/src/CMakeFiles/ost_info.dir/info_path.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_INFO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_info_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/info/src/CMakeFiles/ost_info.dir/info_path.cc.o -MF CMakeFiles/ost_info.dir/info_path.cc.o.d -o CMakeFiles/ost_info.dir/info_path.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/info/src/info_path.cc
[  6%] Building CXX object modules/info/src/CMakeFiles/ost_info.dir/info_set.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_INFO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_info_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/info/src/CMakeFiles/ost_info.dir/info_set.cc.o -MF CMakeFiles/ost_info.dir/info_set.cc.o.d -o CMakeFiles/ost_info.dir/info_set.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/info/src/info_set.cc
[  6%] Building CXX object modules/info/src/CMakeFiles/ost_info.dir/info_visitor.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_INFO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_info_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/info/src/CMakeFiles/ost_info.dir/info_visitor.cc.o -MF CMakeFiles/ost_info.dir/info_visitor.cc.o.d -o CMakeFiles/ost_info.dir/info_visitor.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/info/src/info_visitor.cc
[  6%] Building CXX object modules/info/src/CMakeFiles/ost_info.dir/geom_info_conversion.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_INFO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_info_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/info/src/CMakeFiles/ost_info.dir/geom_info_conversion.cc.o -MF CMakeFiles/ost_info.dir/geom_info_conversion.cc.o.d -o CMakeFiles/ost_info.dir/geom_info_conversion.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/info/src/geom_info_conversion.cc
[  6%] Building CXX object modules/info/src/CMakeFiles/ost_info.dir/info_verbose_visitor.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_INFO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_info_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/info/src/CMakeFiles/ost_info.dir/info_verbose_visitor.cc.o -MF CMakeFiles/ost_info.dir/info_verbose_visitor.cc.o.d -o CMakeFiles/ost_info.dir/info_verbose_visitor.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/info/src/info_verbose_visitor.cc
[  6%] Linking CXX shared module ../../../stage/lib/python3.12/dist-packages/ost/geom/_ost_geom.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_geom.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/_ost_geom.dir/link.d -Wl,-z,relro -shared  -o ../../../stage/lib/python3.12/dist-packages/ost/geom/_ost_geom.so CMakeFiles/_ost_geom.dir/export_vec2.cc.o CMakeFiles/_ost_geom.dir/export_vecmat2_op.cc.o CMakeFiles/_ost_geom.dir/export_vec3.cc.o CMakeFiles/_ost_geom.dir/export_vecmat3_op.cc.o CMakeFiles/_ost_geom.dir/export_vec4.cc.o CMakeFiles/_ost_geom.dir/export_vecmat4_op.cc.o CMakeFiles/_ost_geom.dir/wrap_geom.cc.o CMakeFiles/_ost_geom.dir/export_mat2.cc.o CMakeFiles/_ost_geom.dir/export_mat3.cc.o CMakeFiles/_ost_geom.dir/export_mat4.cc.o CMakeFiles/_ost_geom.dir/export_composite2.cc.o CMakeFiles/_ost_geom.dir/export_composite3.cc.o CMakeFiles/_ost_geom.dir/export_composite2_op.cc.o CMakeFiles/_ost_geom.dir/export_composite3_op.cc.o CMakeFiles/_ost_geom.dir/export_quat.cc.o CMakeFiles/_ost_geom.dir/export_transform.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libpython3.12.so /usr/lib/x86_64-linux-gnu/libboost_python312.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/geom/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/geom/./__init__.pyc\",\"__init__.py\",doraise=True)"
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[  6%] Built target _ost_geom
make  -f modules/base/pymod/CMakeFiles/_ost_base.dir/build.make modules/base/pymod/CMakeFiles/_ost_base.dir/depend
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/base/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod/CMakeFiles/_ost_base.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[  6%] Building CXX object modules/base/pymod/CMakeFiles/_ost_base.dir/export_range.cc.o
[  6%] Building CXX object modules/base/pymod/CMakeFiles/_ost_base.dir/wrap_base.cc.o
[  6%] Building CXX object modules/base/pymod/CMakeFiles/_ost_base.dir/export_logger.cc.o
[  6%] Building CXX object modules/base/pymod/CMakeFiles/_ost_base.dir/export_units.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/pymod/CMakeFiles/_ost_base.dir/export_range.cc.o -MF CMakeFiles/_ost_base.dir/export_range.cc.o.d -o CMakeFiles/_ost_base.dir/export_range.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/base/pymod/export_range.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/pymod/CMakeFiles/_ost_base.dir/wrap_base.cc.o -MF CMakeFiles/_ost_base.dir/wrap_base.cc.o.d -o CMakeFiles/_ost_base.dir/wrap_base.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/base/pymod/wrap_base.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/pymod/CMakeFiles/_ost_base.dir/export_logger.cc.o -MF CMakeFiles/_ost_base.dir/export_logger.cc.o.d -o CMakeFiles/_ost_base.dir/export_logger.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/base/pymod/export_logger.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -D_ost_base_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/pymod/CMakeFiles/_ost_base.dir/export_units.cc.o -MF CMakeFiles/_ost_base.dir/export_units.cc.o.d -o CMakeFiles/_ost_base.dir/export_units.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/base/pymod/export_units.cc
[  6%] Linking CXX shared library ../../../stage/lib/libost_info.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_info.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/ost_info.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_info.so.2.9 -o ../../../stage/lib/libost_info.so.2.9.0 CMakeFiles/ost_info.dir/info_impl.cc.o CMakeFiles/ost_info.dir/info_handle.cc.o CMakeFiles/ost_info.dir/info_group.cc.o CMakeFiles/ost_info.dir/info_item.cc.o CMakeFiles/ost_info.dir/info_path.cc.o CMakeFiles/ost_info.dir/info_set.cc.o CMakeFiles/ost_info.dir/info_visitor.cc.o CMakeFiles/ost_info.dir/geom_info_conversion.cc.o CMakeFiles/ost_info.dir/info_verbose_visitor.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 ../../../stage/lib/libost_base.so.2.9.0 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E cmake_symlink_library ../../../stage/lib/libost_info.so.2.9.0 ../../../stage/lib/libost_info.so.2.9 ../../../stage/lib/libost_info.so
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[  6%] Built target ost_info
make  -f modules/mol/base/src/CMakeFiles/ost_mol.dir/build.make modules/mol/base/src/CMakeFiles/ost_mol.dir/depend
make  -f modules/img/base/src/CMakeFiles/ost_img.dir/build.make modules/img/base/src/CMakeFiles/ost_img.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src/CMakeFiles/ost_mol.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/img/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src/CMakeFiles/ost_img.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
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make  -f modules/mol/base/src/CMakeFiles/ost_mol.dir/build.make modules/mol/base/src/CMakeFiles/ost_mol.dir/build
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make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[  7%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/chain_handle.cc.o
[  7%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/atom_base.cc.o
[  7%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/bond_handle.cc.o
[  7%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/circle_mask.cc.o
[  7%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/data_observer.cc.o
[  7%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/chain_type.cc.o
[  8%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/chain_view.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/atom_base.cc.o -MF CMakeFiles/ost_mol.dir/atom_base.cc.o.d -o CMakeFiles/ost_mol.dir/atom_base.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/atom_base.cc
[  8%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/data_algorithm.cc.o
[  8%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/data.cc.o
[  8%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/chain_base.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/data_observer.cc.o -MF CMakeFiles/ost_img.dir/data_observer.cc.o.d -o CMakeFiles/ost_img.dir/data_observer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/data_observer.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/bond_handle.cc.o -MF CMakeFiles/ost_mol.dir/bond_handle.cc.o.d -o CMakeFiles/ost_mol.dir/bond_handle.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/bond_handle.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/circle_mask.cc.o -MF CMakeFiles/ost_img.dir/circle_mask.cc.o.d -o CMakeFiles/ost_img.dir/circle_mask.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/circle_mask.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/chain_handle.cc.o -MF CMakeFiles/ost_mol.dir/chain_handle.cc.o.d -o CMakeFiles/ost_mol.dir/chain_handle.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/chain_handle.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/data_algorithm.cc.o -MF CMakeFiles/ost_img.dir/data_algorithm.cc.o.d -o CMakeFiles/ost_img.dir/data_algorithm.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/data_algorithm.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/chain_view.cc.o -MF CMakeFiles/ost_mol.dir/chain_view.cc.o.d -o CMakeFiles/ost_mol.dir/chain_view.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/chain_view.cc
[  8%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/composite_mask.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/chain_base.cc.o -MF CMakeFiles/ost_mol.dir/chain_base.cc.o.d -o CMakeFiles/ost_mol.dir/chain_base.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/chain_base.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/data.cc.o -MF CMakeFiles/ost_img.dir/data.cc.o.d -o CMakeFiles/ost_img.dir/data.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/data.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/chain_type.cc.o -MF CMakeFiles/ost_mol.dir/chain_type.cc.o.d -o CMakeFiles/ost_mol.dir/chain_type.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/chain_type.cc
[  8%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/atom_view.cc.o
[  8%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/atom_handle.cc.o
[  8%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/extent_iterator.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/atom_handle.cc.o -MF CMakeFiles/ost_mol.dir/atom_handle.cc.o.d -o CMakeFiles/ost_mol.dir/atom_handle.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/atom_handle.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/composite_mask.cc.o -MF CMakeFiles/ost_img.dir/composite_mask.cc.o.d -o CMakeFiles/ost_img.dir/composite_mask.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/composite_mask.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/atom_view.cc.o -MF CMakeFiles/ost_mol.dir/atom_view.cc.o.d -o CMakeFiles/ost_mol.dir/atom_view.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/atom_view.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/extent_iterator.cc.o -MF CMakeFiles/ost_img.dir/extent_iterator.cc.o.d -o CMakeFiles/ost_img.dir/extent_iterator.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/extent_iterator.cc
[  8%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/coord_group.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/coord_group.cc.o -MF CMakeFiles/ost_mol.dir/coord_group.cc.o.d -o CMakeFiles/ost_mol.dir/coord_group.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/coord_group.cc
[  8%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/coord_frame.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/coord_frame.cc.o -MF CMakeFiles/ost_mol.dir/coord_frame.cc.o.d -o CMakeFiles/ost_mol.dir/coord_frame.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/coord_frame.cc
[  8%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/extent_mask.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/extent_mask.cc.o -MF CMakeFiles/ost_img.dir/extent_mask.cc.o.d -o CMakeFiles/ost_img.dir/extent_mask.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/extent_mask.cc
[  8%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/extent.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/extent.cc.o -MF CMakeFiles/ost_img.dir/extent.cc.o.d -o CMakeFiles/ost_img.dir/extent.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/extent.cc
[  8%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/editor_base.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/editor_base.cc.o -MF CMakeFiles/ost_mol.dir/editor_base.cc.o.d -o CMakeFiles/ost_mol.dir/editor_base.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/editor_base.cc
[ 10%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_base.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_base.cc.o -MF CMakeFiles/ost_mol.dir/entity_base.cc.o.d -o CMakeFiles/ost_mol.dir/entity_base.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/entity_base.cc
[ 10%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/image_factory.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/image_factory.cc.o -MF CMakeFiles/ost_img.dir/image_factory.cc.o.d -o CMakeFiles/ost_img.dir/image_factory.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_factory.cc
[ 10%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/image_handle.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/image_handle.cc.o -MF CMakeFiles/ost_img.dir/image_handle.cc.o.d -o CMakeFiles/ost_img.dir/image_handle.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_handle.cc
[ 10%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/image_impl.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/image_impl.cc.o -MF CMakeFiles/ost_img.dir/image_impl.cc.o.d -o CMakeFiles/ost_img.dir/image_impl.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_impl.cc
[ 10%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_handle.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_handle.cc.o -MF CMakeFiles/ost_mol.dir/entity_handle.cc.o.d -o CMakeFiles/ost_mol.dir/entity_handle.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/entity_handle.cc
[ 10%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/image_list.cc.o
[ 10%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/inverted_mask.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/image_list.cc.o -MF CMakeFiles/ost_img.dir/image_list.cc.o.d -o CMakeFiles/ost_img.dir/image_list.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_list.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/inverted_mask.cc.o -MF CMakeFiles/ost_img.dir/inverted_mask.cc.o.d -o CMakeFiles/ost_img.dir/inverted_mask.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/inverted_mask.cc
[ 10%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_observer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_observer.cc.o -MF CMakeFiles/ost_mol.dir/entity_observer.cc.o.d -o CMakeFiles/ost_mol.dir/entity_observer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/entity_observer.cc
[ 10%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_property_mapper.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_property_mapper.cc.o -MF CMakeFiles/ost_mol.dir/entity_property_mapper.cc.o.d -o CMakeFiles/ost_mol.dir/entity_property_mapper.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/entity_property_mapper.cc
[ 11%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/map.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/map.cc.o -MF CMakeFiles/ost_img.dir/map.cc.o.d -o CMakeFiles/ost_img.dir/map.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/map.cc
[ 11%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_view.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_view.cc.o -MF CMakeFiles/ost_mol.dir/entity_view.cc.o.d -o CMakeFiles/ost_mol.dir/entity_view.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/entity_view.cc
[ 11%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/mask_base.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/mask_base.cc.o -MF CMakeFiles/ost_img.dir/mask_base.cc.o.d -o CMakeFiles/ost_img.dir/mask_base.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/mask_base.cc
[ 11%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_visitor.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/entity_visitor.cc.o -MF CMakeFiles/ost_mol.dir/entity_visitor.cc.o.d -o CMakeFiles/ost_mol.dir/entity_visitor.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/entity_visitor.cc
[ 11%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/ics_editor.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/ics_editor.cc.o -MF CMakeFiles/ost_mol.dir/ics_editor.cc.o.d -o CMakeFiles/ost_mol.dir/ics_editor.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/ics_editor.cc
[ 11%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/mask_op.cc.o
[ 11%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/not_connected_error.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/not_connected_error.cc.o -MF CMakeFiles/ost_mol.dir/not_connected_error.cc.o.d -o CMakeFiles/ost_mol.dir/not_connected_error.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/not_connected_error.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/mask_op.cc.o -MF CMakeFiles/ost_img.dir/mask_op.cc.o.d -o CMakeFiles/ost_img.dir/mask_op.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/mask_op.cc
[ 11%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/property_id.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/property_id.cc.o -MF CMakeFiles/ost_mol.dir/property_id.cc.o.d -o CMakeFiles/ost_mol.dir/property_id.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/property_id.cc
[ 11%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/query.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/query.cc.o -MF CMakeFiles/ost_mol.dir/query.cc.o.d -o CMakeFiles/ost_mol.dir/query.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/query.cc
[ 11%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/query_error.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/query_error.cc.o -MF CMakeFiles/ost_mol.dir/query_error.cc.o.d -o CMakeFiles/ost_mol.dir/query_error.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/query_error.cc
[ 11%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/mask.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/mask.cc.o -MF CMakeFiles/ost_img.dir/mask.cc.o.d -o CMakeFiles/ost_img.dir/mask.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/mask.cc
[ 12%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/query_state.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/query_state.cc.o -MF CMakeFiles/ost_mol.dir/query_state.cc.o.d -o CMakeFiles/ost_mol.dir/query_state.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/query_state.cc
[ 12%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/observable.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/observable.cc.o -MF CMakeFiles/ost_img.dir/observable.cc.o.d -o CMakeFiles/ost_img.dir/observable.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/observable.cc
[ 12%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/paste_impl.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/paste_impl.cc.o -MF CMakeFiles/ost_img.dir/paste_impl.cc.o.d -o CMakeFiles/ost_img.dir/paste_impl.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/paste_impl.cc
[ 12%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/peak.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/peak.cc.o -MF CMakeFiles/ost_img.dir/peak.cc.o.d -o CMakeFiles/ost_img.dir/peak.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/peak.cc
[ 12%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/residue_base.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/residue_base.cc.o -MF CMakeFiles/ost_mol.dir/residue_base.cc.o.d -o CMakeFiles/ost_mol.dir/residue_base.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/residue_base.cc
[ 12%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/residue_handle.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/residue_handle.cc.o -MF CMakeFiles/ost_mol.dir/residue_handle.cc.o.d -o CMakeFiles/ost_mol.dir/residue_handle.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/residue_handle.cc
[ 12%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/phase.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/phase.cc.o -MF CMakeFiles/ost_img.dir/phase.cc.o.d -o CMakeFiles/ost_img.dir/phase.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/phase.cc
[ 12%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/physical_units.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/physical_units.cc.o -MF CMakeFiles/ost_img.dir/physical_units.cc.o.d -o CMakeFiles/ost_img.dir/physical_units.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/physical_units.cc
[ 12%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/residue_view.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/residue_view.cc.o -MF CMakeFiles/ost_mol.dir/residue_view.cc.o.d -o CMakeFiles/ost_mol.dir/residue_view.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/residue_view.cc
[ 12%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/surface_builder.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/surface_builder.cc.o -MF CMakeFiles/ost_mol.dir/surface_builder.cc.o.d -o CMakeFiles/ost_mol.dir/surface_builder.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/surface_builder.cc
[ 12%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/pixel_sampling.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/pixel_sampling.cc.o -MF CMakeFiles/ost_img.dir/pixel_sampling.cc.o.d -o CMakeFiles/ost_img.dir/pixel_sampling.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/pixel_sampling.cc
[ 12%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/surface_handle.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/surface_handle.cc.o -MF CMakeFiles/ost_mol.dir/surface_handle.cc.o.d -o CMakeFiles/ost_mol.dir/surface_handle.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/surface_handle.cc
[ 12%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/point_list.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/point_list.cc.o -MF CMakeFiles/ost_img.dir/point_list.cc.o.d -o CMakeFiles/ost_img.dir/point_list.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/point_list.cc
[ 12%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/transfer_connectivity.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/transfer_connectivity.cc.o -MF CMakeFiles/ost_mol.dir/transfer_connectivity.cc.o.d -o CMakeFiles/ost_mol.dir/transfer_connectivity.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/transfer_connectivity.cc
[ 13%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/point.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/point.cc.o -MF CMakeFiles/ost_img.dir/point.cc.o.d -o CMakeFiles/ost_img.dir/point.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/point.cc
[ 13%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/polygon_mask.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/polygon_mask.cc.o -MF CMakeFiles/ost_img.dir/polygon_mask.cc.o.d -o CMakeFiles/ost_img.dir/polygon_mask.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/polygon_mask.cc
[ 13%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/torsion_handle.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/torsion_handle.cc.o -MF CMakeFiles/ost_mol.dir/torsion_handle.cc.o.d -o CMakeFiles/ost_mol.dir/torsion_handle.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/torsion_handle.cc
[ 13%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/progress.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/progress.cc.o -MF CMakeFiles/ost_img.dir/progress.cc.o.d -o CMakeFiles/ost_img.dir/progress.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/progress.cc
[ 13%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/size.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/size.cc.o -MF CMakeFiles/ost_img.dir/size.cc.o.d -o CMakeFiles/ost_img.dir/size.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/size.cc
[ 13%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/spherical_mask.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/spherical_mask.cc.o -MF CMakeFiles/ost_img.dir/spherical_mask.cc.o.d -o CMakeFiles/ost_img.dir/spherical_mask.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/spherical_mask.cc
[ 13%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/mask_info_convert.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/mask_info_convert.cc.o -MF CMakeFiles/ost_img.dir/mask_info_convert.cc.o.d -o CMakeFiles/ost_img.dir/mask_info_convert.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/mask_info_convert.cc
[ 13%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/image_state/image_state_factory.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/image_state/image_state_factory.cc.o -MF CMakeFiles/ost_img.dir/image_state/image_state_factory.cc.o.d -o CMakeFiles/ost_img.dir/image_state/image_state_factory.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_factory.cc
[ 13%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/image_state/index.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/image_state/index.cc.o -MF CMakeFiles/ost_img.dir/image_state/index.cc.o.d -o CMakeFiles/ost_img.dir/image_state/index.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/index.cc
[ 13%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/query_view_wrapper.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/query_view_wrapper.cc.o -MF CMakeFiles/ost_mol.dir/query_view_wrapper.cc.o.d -o CMakeFiles/ost_mol.dir/query_view_wrapper.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/query_view_wrapper.cc
[ 13%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/image_state/image_state_base.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/image_state/image_state_base.cc.o -MF CMakeFiles/ost_img.dir/image_state/image_state_base.cc.o.d -o CMakeFiles/ost_img.dir/image_state/image_state_base.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_base.cc
[ 13%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/view_op.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/view_op.cc.o -MF CMakeFiles/ost_mol.dir/view_op.cc.o.d -o CMakeFiles/ost_mol.dir/view_op.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/view_op.cc
[ 13%] Building CXX object modules/img/base/src/CMakeFiles/ost_img.dir/raster_image/raster_image.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/src/CMakeFiles/ost_img.dir/raster_image/raster_image.cc.o -MF CMakeFiles/ost_img.dir/raster_image/raster_image.cc.o.d -o CMakeFiles/ost_img.dir/raster_image/raster_image.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/raster_image/raster_image.cc
[ 13%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/coord_source.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/coord_source.cc.o -MF CMakeFiles/ost_mol.dir/coord_source.cc.o.d -o CMakeFiles/ost_mol.dir/coord_source.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/coord_source.cc
[ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/in_mem_coord_source.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/in_mem_coord_source.cc.o -MF CMakeFiles/ost_mol.dir/in_mem_coord_source.cc.o.d -o CMakeFiles/ost_mol.dir/in_mem_coord_source.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/in_mem_coord_source.cc
[ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/bounding_box.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/bounding_box.cc.o -MF CMakeFiles/ost_mol.dir/bounding_box.cc.o.d -o CMakeFiles/ost_mol.dir/bounding_box.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/bounding_box.cc
[ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/xcs_editor.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/xcs_editor.cc.o -MF CMakeFiles/ost_mol.dir/xcs_editor.cc.o.d -o CMakeFiles/ost_mol.dir/xcs_editor.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/xcs_editor.cc
[ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/atom_impl.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/atom_impl.cc.o -MF CMakeFiles/ost_mol.dir/impl/atom_impl.cc.o.d -o CMakeFiles/ost_mol.dir/impl/atom_impl.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/atom_impl.cc
[ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/chain_impl.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/chain_impl.cc.o -MF CMakeFiles/ost_mol.dir/impl/chain_impl.cc.o.d -o CMakeFiles/ost_mol.dir/impl/chain_impl.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/chain_impl.cc
[ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/connector_impl.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/connector_impl.cc.o -MF CMakeFiles/ost_mol.dir/impl/connector_impl.cc.o.d -o CMakeFiles/ost_mol.dir/impl/connector_impl.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/connector_impl.cc
[ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/dihedral.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/dihedral.cc.o -MF CMakeFiles/ost_mol.dir/impl/dihedral.cc.o.d -o CMakeFiles/ost_mol.dir/impl/dihedral.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/dihedral.cc
[ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/entity_impl.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/entity_impl.cc.o -MF CMakeFiles/ost_mol.dir/impl/entity_impl.cc.o.d -o CMakeFiles/ost_mol.dir/impl/entity_impl.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/entity_impl.cc
[ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/fragment_impl.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/fragment_impl.cc.o -MF CMakeFiles/ost_mol.dir/impl/fragment_impl.cc.o.d -o CMakeFiles/ost_mol.dir/impl/fragment_impl.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/fragment_impl.cc
[ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/query_ast.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/query_ast.cc.o -MF CMakeFiles/ost_mol.dir/impl/query_ast.cc.o.d -o CMakeFiles/ost_mol.dir/impl/query_ast.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/query_ast.cc
[ 15%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/query_impl.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/query_impl.cc.o -MF CMakeFiles/ost_mol.dir/impl/query_impl.cc.o.d -o CMakeFiles/ost_mol.dir/impl/query_impl.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/query_impl.cc
[ 16%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/residue_impl.cc.o
[ 16%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/surface_impl.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/residue_impl.cc.o -MF CMakeFiles/ost_mol.dir/impl/residue_impl.cc.o.d -o CMakeFiles/ost_mol.dir/impl/residue_impl.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/residue_impl.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/surface_impl.cc.o -MF CMakeFiles/ost_mol.dir/impl/surface_impl.cc.o.d -o CMakeFiles/ost_mol.dir/impl/surface_impl.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/surface_impl.cc
[ 16%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/torsion_impl.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/torsion_impl.cc.o -MF CMakeFiles/ost_mol.dir/impl/torsion_impl.cc.o.d -o CMakeFiles/ost_mol.dir/impl/torsion_impl.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/torsion_impl.cc
[ 16%] Building CXX object modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/atom_prop.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_MOL -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/src/CMakeFiles/ost_mol.dir/impl/atom_prop.cc.o -MF CMakeFiles/ost_mol.dir/impl/atom_prop.cc.o.d -o CMakeFiles/ost_mol.dir/impl/atom_prop.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/atom_prop.cc
[ 16%] Linking CXX shared library ../../../../stage/lib/libost_img.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_img.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/ost_img.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_img.so.2.9 -o ../../../../stage/lib/libost_img.so.2.9.0 CMakeFiles/ost_img.dir/circle_mask.cc.o CMakeFiles/ost_img.dir/composite_mask.cc.o CMakeFiles/ost_img.dir/data_algorithm.cc.o CMakeFiles/ost_img.dir/data_observer.cc.o CMakeFiles/ost_img.dir/data.cc.o CMakeFiles/ost_img.dir/extent_iterator.cc.o CMakeFiles/ost_img.dir/extent_mask.cc.o CMakeFiles/ost_img.dir/extent.cc.o CMakeFiles/ost_img.dir/image_factory.cc.o CMakeFiles/ost_img.dir/image_handle.cc.o CMakeFiles/ost_img.dir/image_impl.cc.o CMakeFiles/ost_img.dir/image_list.cc.o CMakeFiles/ost_img.dir/inverted_mask.cc.o CMakeFiles/ost_img.dir/map.cc.o CMakeFiles/ost_img.dir/mask_base.cc.o CMakeFiles/ost_img.dir/mask_op.cc.o CMakeFiles/ost_img.dir/mask.cc.o CMakeFiles/ost_img.dir/observable.cc.o CMakeFiles/ost_img.dir/paste_impl.cc.o CMakeFiles/ost_img.dir/peak.cc.o CMakeFiles/ost_img.dir/phase.cc.o CMakeFiles/ost_img.dir/physical_units.cc.o CMakeFiles/ost_img.dir/pixel_sampling.cc.o CMakeFiles/ost_img.dir/point_list.cc.o CMakeFiles/ost_img.dir/point.cc.o CMakeFiles/ost_img.dir/polygon_mask.cc.o CMakeFiles/ost_img.dir/progress.cc.o CMakeFiles/ost_img.dir/size.cc.o CMakeFiles/ost_img.dir/spherical_mask.cc.o CMakeFiles/ost_img.dir/mask_info_convert.cc.o CMakeFiles/ost_img.dir/image_state/image_state_factory.cc.o CMakeFiles/ost_img.dir/image_state/index.cc.o CMakeFiles/ost_img.dir/image_state/image_state_base.cc.o CMakeFiles/ost_img.dir/raster_image/raster_image.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_info.so.2.9.0 ../../../../stage/lib/libost_base.so.2.9.0 ../../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E cmake_symlink_library ../../../../stage/lib/libost_img.so.2.9.0 ../../../../stage/lib/libost_img.so.2.9 ../../../../stage/lib/libost_img.so
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 16%] Built target ost_img
make  -f modules/img/alg/src/CMakeFiles/ost_img_alg.dir/build.make modules/img/alg/src/CMakeFiles/ost_img_alg.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src/CMakeFiles/ost_img_alg.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/img/alg/src/CMakeFiles/ost_img_alg.dir/build.make modules/img/alg/src/CMakeFiles/ost_img_alg.dir/build
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 16%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/convolute.cc.o
[ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/anisotropic.cc.o
[ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/correlate.cc.o
[ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/auto_correlate.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/convolute.cc.o -MF CMakeFiles/ost_img_alg.dir/convolute.cc.o.d -o CMakeFiles/ost_img_alg.dir/convolute.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/convolute.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/anisotropic.cc.o -MF CMakeFiles/ost_img_alg.dir/anisotropic.cc.o.d -o CMakeFiles/ost_img_alg.dir/anisotropic.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/anisotropic.cc
[ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/density_slice.cc.o
[ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/dft.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/correlate.cc.o -MF CMakeFiles/ost_img_alg.dir/correlate.cc.o.d -o CMakeFiles/ost_img_alg.dir/correlate.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/correlate.cc
[ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/cross_correlate.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/auto_correlate.cc.o -MF CMakeFiles/ost_img_alg.dir/auto_correlate.cc.o.d -o CMakeFiles/ost_img_alg.dir/auto_correlate.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/auto_correlate.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/cross_correlate.cc.o -MF CMakeFiles/ost_img_alg.dir/cross_correlate.cc.o.d -o CMakeFiles/ost_img_alg.dir/cross_correlate.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/cross_correlate.cc
[ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/fft.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/dft.cc.o -MF CMakeFiles/ost_img_alg.dir/dft.cc.o.d -o CMakeFiles/ost_img_alg.dir/dft.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/dft.cc
[ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/gaussian.cc.o
[ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/fourier_filters.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/density_slice.cc.o -MF CMakeFiles/ost_img_alg.dir/density_slice.cc.o.d -o CMakeFiles/ost_img_alg.dir/density_slice.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/density_slice.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/fft.cc.o -MF CMakeFiles/ost_img_alg.dir/fft.cc.o.d -o CMakeFiles/ost_img_alg.dir/fft.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/fft.cc
[ 17%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/gaussian_gradient_magnitude.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/fourier_filters.cc.o -MF CMakeFiles/ost_img_alg.dir/fourier_filters.cc.o.d -o CMakeFiles/ost_img_alg.dir/fourier_filters.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/fourier_filters.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/gaussian.cc.o -MF CMakeFiles/ost_img_alg.dir/gaussian.cc.o.d -o CMakeFiles/ost_img_alg.dir/gaussian.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/gaussian.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/gaussian_gradient_magnitude.cc.o -MF CMakeFiles/ost_img_alg.dir/gaussian_gradient_magnitude.cc.o.d -o CMakeFiles/ost_img_alg.dir/gaussian_gradient_magnitude.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/gaussian_gradient_magnitude.cc
[ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/highest_peak_search_3d.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/highest_peak_search_3d.cc.o -MF CMakeFiles/ost_img_alg.dir/highest_peak_search_3d.cc.o.d -o CMakeFiles/ost_img_alg.dir/highest_peak_search_3d.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/highest_peak_search_3d.cc
[ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/gaussian_laplacian.cc.o
[ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/histogram.cc.o
[ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/line_iterator.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/gaussian_laplacian.cc.o -MF CMakeFiles/ost_img_alg.dir/gaussian_laplacian.cc.o.d -o CMakeFiles/ost_img_alg.dir/gaussian_laplacian.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/gaussian_laplacian.cc
[ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/local_sigma_threshold.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/histogram.cc.o -MF CMakeFiles/ost_img_alg.dir/histogram.cc.o.d -o CMakeFiles/ost_img_alg.dir/histogram.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/histogram.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/line_iterator.cc.o -MF CMakeFiles/ost_img_alg.dir/line_iterator.cc.o.d -o CMakeFiles/ost_img_alg.dir/line_iterator.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/line_iterator.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/local_sigma_threshold.cc.o -MF CMakeFiles/ost_img_alg.dir/local_sigma_threshold.cc.o.d -o CMakeFiles/ost_img_alg.dir/local_sigma_threshold.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/local_sigma_threshold.cc
[ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/mask_image.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/mask_image.cc.o -MF CMakeFiles/ost_img_alg.dir/mask_image.cc.o.d -o CMakeFiles/ost_img_alg.dir/mask_image.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/mask_image.cc
[ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/normalizer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/normalizer.cc.o -MF CMakeFiles/ost_img_alg.dir/normalizer.cc.o.d -o CMakeFiles/ost_img_alg.dir/normalizer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/normalizer.cc
[ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/normalizer_factory.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/normalizer_factory.cc.o -MF CMakeFiles/ost_img_alg.dir/normalizer_factory.cc.o.d -o CMakeFiles/ost_img_alg.dir/normalizer_factory.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/normalizer_factory.cc
[ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/norm_linear.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/norm_linear.cc.o -MF CMakeFiles/ost_img_alg.dir/norm_linear.cc.o.d -o CMakeFiles/ost_img_alg.dir/norm_linear.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/norm_linear.cc
[ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/norm_log.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/norm_log.cc.o -MF CMakeFiles/ost_img_alg.dir/norm_log.cc.o.d -o CMakeFiles/ost_img_alg.dir/norm_log.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/norm_log.cc
[ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/power_spectrum.cc.o
[ 18%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/norm_od.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/norm_od.cc.o -MF CMakeFiles/ost_img_alg.dir/norm_od.cc.o.d -o CMakeFiles/ost_img_alg.dir/norm_od.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/norm_od.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/power_spectrum.cc.o -MF CMakeFiles/ost_img_alg.dir/power_spectrum.cc.o.d -o CMakeFiles/ost_img_alg.dir/power_spectrum.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/power_spectrum.cc
[ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/randomize.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/randomize.cc.o -MF CMakeFiles/ost_img_alg.dir/randomize.cc.o.d -o CMakeFiles/ost_img_alg.dir/randomize.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/randomize.cc
[ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/smooth_mask_image.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/smooth_mask_image.cc.o -MF CMakeFiles/ost_img_alg.dir/smooth_mask_image.cc.o.d -o CMakeFiles/ost_img_alg.dir/smooth_mask_image.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/smooth_mask_image.cc
[ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/stat.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/stat.cc.o -MF CMakeFiles/ost_img_alg.dir/stat.cc.o.d -o CMakeFiles/ost_img_alg.dir/stat.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/stat.cc
[ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/stat_min_max.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/stat_min_max.cc.o -MF CMakeFiles/ost_img_alg.dir/stat_min_max.cc.o.d -o CMakeFiles/ost_img_alg.dir/stat_min_max.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/stat_min_max.cc
[ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/alg_transform.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/alg_transform.cc.o -MF CMakeFiles/ost_img_alg.dir/alg_transform.cc.o.d -o CMakeFiles/ost_img_alg.dir/alg_transform.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/alg_transform.cc
[ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/alg_mirror.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/alg_mirror.cc.o -MF CMakeFiles/ost_img_alg.dir/alg_mirror.cc.o.d -o CMakeFiles/ost_img_alg.dir/alg_mirror.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/alg_mirror.cc
[ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/alg_shift.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/alg_shift.cc.o -MF CMakeFiles/ost_img_alg.dir/alg_shift.cc.o.d -o CMakeFiles/ost_img_alg.dir/alg_shift.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/alg_shift.cc
[ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/threshold.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/threshold.cc.o -MF CMakeFiles/ost_img_alg.dir/threshold.cc.o.d -o CMakeFiles/ost_img_alg.dir/threshold.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/threshold.cc
[ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/discrete_shrink.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/discrete_shrink.cc.o -MF CMakeFiles/ost_img_alg.dir/discrete_shrink.cc.o.d -o CMakeFiles/ost_img_alg.dir/discrete_shrink.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/discrete_shrink.cc
[ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/transformation_base.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/transformation_base.cc.o -MF CMakeFiles/ost_img_alg.dir/transformation_base.cc.o.d -o CMakeFiles/ost_img_alg.dir/transformation_base.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/transformation_base.cc
[ 20%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/transformations.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/transformations.cc.o -MF CMakeFiles/ost_img_alg.dir/transformations.cc.o.d -o CMakeFiles/ost_img_alg.dir/transformations.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/transformations.cc
[ 21%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/fractional_shift.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/fractional_shift.cc.o -MF CMakeFiles/ost_img_alg.dir/fractional_shift.cc.o.d -o CMakeFiles/ost_img_alg.dir/fractional_shift.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/fractional_shift.cc
[ 21%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/polar.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/polar.cc.o -MF CMakeFiles/ost_img_alg.dir/polar.cc.o.d -o CMakeFiles/ost_img_alg.dir/polar.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/polar.cc
[ 21%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/rscrosscorr.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/rscrosscorr.cc.o -MF CMakeFiles/ost_img_alg.dir/rscrosscorr.cc.o.d -o CMakeFiles/ost_img_alg.dir/rscrosscorr.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/rscrosscorr.cc
[ 21%] Building CXX object modules/img/alg/src/CMakeFiles/ost_img_alg.dir/line_average.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_IMG_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/src/CMakeFiles/ost_img_alg.dir/line_average.cc.o -MF CMakeFiles/ost_img_alg.dir/line_average.cc.o.d -o CMakeFiles/ost_img_alg.dir/line_average.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/line_average.cc
[ 21%] Linking CXX shared module ../../../stage/lib/python3.12/dist-packages/ost/_ost_base.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_base.dir/link.txt --verbose=1
[ 21%] Linking CXX shared library ../../../../stage/lib/libost_mol.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_mol.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/_ost_base.dir/link.d -Wl,-z,relro -shared  -o ../../../stage/lib/python3.12/dist-packages/ost/_ost_base.so CMakeFiles/_ost_base.dir/wrap_base.cc.o CMakeFiles/_ost_base.dir/export_logger.cc.o CMakeFiles/_ost_base.dir/export_range.cc.o CMakeFiles/_ost_base.dir/export_units.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_base.so.2.9.0 /usr/lib/x86_64-linux-gnu/libpython3.12.so /usr/lib/x86_64-linux-gnu/libboost_python312.so.1.83.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/base/pymod/settings.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/./settings.pyc\",\"settings.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/base/pymod/stutil.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/./stutil.pyc\",\"stutil.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/base/pymod/table.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/./table.pyc\",\"table.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/base/pymod/table_selector.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/./table_selector.pyc\",\"table_selector.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/base/pymod/xmlrunner.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/./xmlrunner.pyc\",\"xmlrunner.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/base/pymod/testutils.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/./testutils.pyc\",\"testutils.py\",doraise=True)"
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 21%] Built target _ost_base
make  -f modules/info/pymod/CMakeFiles/_ost_info.dir/build.make modules/info/pymod/CMakeFiles/_ost_info.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/info/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/pymod/CMakeFiles/_ost_info.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/info/pymod/CMakeFiles/_ost_info.dir/build.make modules/info/pymod/CMakeFiles/_ost_info.dir/build
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 21%] Building CXX object modules/info/pymod/CMakeFiles/_ost_info.dir/wrap_info.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_info_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/info/pymod/CMakeFiles/_ost_info.dir/wrap_info.cc.o -MF CMakeFiles/_ost_info.dir/wrap_info.cc.o.d -o CMakeFiles/_ost_info.dir/wrap_info.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/info/pymod/wrap_info.cc
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/ost_mol.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_mol.so.2.9 -o ../../../../stage/lib/libost_mol.so.2.9.0 CMakeFiles/ost_mol.dir/atom_base.cc.o CMakeFiles/ost_mol.dir/atom_handle.cc.o CMakeFiles/ost_mol.dir/atom_view.cc.o CMakeFiles/ost_mol.dir/bond_handle.cc.o CMakeFiles/ost_mol.dir/chain_base.cc.o CMakeFiles/ost_mol.dir/chain_handle.cc.o CMakeFiles/ost_mol.dir/chain_view.cc.o CMakeFiles/ost_mol.dir/chain_type.cc.o CMakeFiles/ost_mol.dir/coord_frame.cc.o CMakeFiles/ost_mol.dir/coord_group.cc.o CMakeFiles/ost_mol.dir/editor_base.cc.o CMakeFiles/ost_mol.dir/entity_base.cc.o CMakeFiles/ost_mol.dir/entity_handle.cc.o CMakeFiles/ost_mol.dir/entity_observer.cc.o CMakeFiles/ost_mol.dir/entity_property_mapper.cc.o CMakeFiles/ost_mol.dir/entity_view.cc.o CMakeFiles/ost_mol.dir/entity_visitor.cc.o CMakeFiles/ost_mol.dir/ics_editor.cc.o CMakeFiles/ost_mol.dir/not_connected_error.cc.o CMakeFiles/ost_mol.dir/property_id.cc.o CMakeFiles/ost_mol.dir/query.cc.o CMakeFiles/ost_mol.dir/query_error.cc.o CMakeFiles/ost_mol.dir/query_state.cc.o CMakeFiles/ost_mol.dir/residue_base.cc.o CMakeFiles/ost_mol.dir/residue_handle.cc.o CMakeFiles/ost_mol.dir/residue_view.cc.o CMakeFiles/ost_mol.dir/surface_builder.cc.o CMakeFiles/ost_mol.dir/surface_handle.cc.o CMakeFiles/ost_mol.dir/transfer_connectivity.cc.o CMakeFiles/ost_mol.dir/torsion_handle.cc.o CMakeFiles/ost_mol.dir/query_view_wrapper.cc.o CMakeFiles/ost_mol.dir/view_op.cc.o CMakeFiles/ost_mol.dir/coord_source.cc.o CMakeFiles/ost_mol.dir/in_mem_coord_source.cc.o CMakeFiles/ost_mol.dir/bounding_box.cc.o CMakeFiles/ost_mol.dir/xcs_editor.cc.o CMakeFiles/ost_mol.dir/impl/atom_impl.cc.o CMakeFiles/ost_mol.dir/impl/chain_impl.cc.o CMakeFiles/ost_mol.dir/impl/connector_impl.cc.o CMakeFiles/ost_mol.dir/impl/dihedral.cc.o CMakeFiles/ost_mol.dir/impl/entity_impl.cc.o CMakeFiles/ost_mol.dir/impl/fragment_impl.cc.o CMakeFiles/ost_mol.dir/impl/query_ast.cc.o CMakeFiles/ost_mol.dir/impl/query_impl.cc.o CMakeFiles/ost_mol.dir/impl/residue_impl.cc.o CMakeFiles/ost_mol.dir/impl/surface_impl.cc.o CMakeFiles/ost_mol.dir/impl/torsion_impl.cc.o CMakeFiles/ost_mol.dir/impl/atom_prop.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_info.so.2.9.0 ../../../../stage/lib/libost_base.so.2.9.0 ../../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E cmake_symlink_library ../../../../stage/lib/libost_mol.so.2.9.0 ../../../../stage/lib/libost_mol.so.2.9 ../../../../stage/lib/libost_mol.so
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 21%] Built target ost_mol
make  -f modules/seq/base/src/CMakeFiles/ost_seq.dir/build.make modules/seq/base/src/CMakeFiles/ost_seq.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src/CMakeFiles/ost_seq.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/seq/base/src/CMakeFiles/ost_seq.dir/build.make modules/seq/base/src/CMakeFiles/ost_seq.dir/build
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 21%] Building CXX object modules/seq/base/src/CMakeFiles/ost_seq.dir/impl/sequence_impl.cc.o
[ 21%] Building CXX object modules/seq/base/src/CMakeFiles/ost_seq.dir/sequence_handle.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/src/CMakeFiles/ost_seq.dir/impl/sequence_impl.cc.o -MF CMakeFiles/ost_seq.dir/impl/sequence_impl.cc.o.d -o CMakeFiles/ost_seq.dir/impl/sequence_impl.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/impl/sequence_impl.cc
[ 21%] Building CXX object modules/seq/base/src/CMakeFiles/ost_seq.dir/impl/sequence_list_impl.cc.o
[ 21%] Building CXX object modules/seq/base/src/CMakeFiles/ost_seq.dir/aligned_region.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/src/CMakeFiles/ost_seq.dir/impl/sequence_list_impl.cc.o -MF CMakeFiles/ost_seq.dir/impl/sequence_list_impl.cc.o.d -o CMakeFiles/ost_seq.dir/impl/sequence_list_impl.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/impl/sequence_list_impl.cc
[ 21%] Building CXX object modules/seq/base/src/CMakeFiles/ost_seq.dir/aligned_column.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/src/CMakeFiles/ost_seq.dir/sequence_handle.cc.o -MF CMakeFiles/ost_seq.dir/sequence_handle.cc.o.d -o CMakeFiles/ost_seq.dir/sequence_handle.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/sequence_handle.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/src/CMakeFiles/ost_seq.dir/aligned_region.cc.o -MF CMakeFiles/ost_seq.dir/aligned_region.cc.o.d -o CMakeFiles/ost_seq.dir/aligned_region.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/aligned_region.cc
[ 21%] Building CXX object modules/seq/base/src/CMakeFiles/ost_seq.dir/sequence_list.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/src/CMakeFiles/ost_seq.dir/aligned_column.cc.o -MF CMakeFiles/ost_seq.dir/aligned_column.cc.o.d -o CMakeFiles/ost_seq.dir/aligned_column.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/aligned_column.cc
[ 21%] Building CXX object modules/seq/base/src/CMakeFiles/ost_seq.dir/alignment_handle.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/src/CMakeFiles/ost_seq.dir/sequence_list.cc.o -MF CMakeFiles/ost_seq.dir/sequence_list.cc.o.d -o CMakeFiles/ost_seq.dir/sequence_list.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/sequence_list.cc
[ 21%] Building CXX object modules/seq/base/src/CMakeFiles/ost_seq.dir/sequence_op.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/src/CMakeFiles/ost_seq.dir/alignment_handle.cc.o -MF CMakeFiles/ost_seq.dir/alignment_handle.cc.o.d -o CMakeFiles/ost_seq.dir/alignment_handle.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/alignment_handle.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/src/CMakeFiles/ost_seq.dir/sequence_op.cc.o -MF CMakeFiles/ost_seq.dir/sequence_op.cc.o.d -o CMakeFiles/ost_seq.dir/sequence_op.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/sequence_op.cc
[ 22%] Building CXX object modules/seq/base/src/CMakeFiles/ost_seq.dir/views_from_sequences.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/src/CMakeFiles/ost_seq.dir/views_from_sequences.cc.o -MF CMakeFiles/ost_seq.dir/views_from_sequences.cc.o.d -o CMakeFiles/ost_seq.dir/views_from_sequences.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/views_from_sequences.cc
[ 22%] Building CXX object modules/seq/base/src/CMakeFiles/ost_seq.dir/profile_handle.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/src/CMakeFiles/ost_seq.dir/profile_handle.cc.o -MF CMakeFiles/ost_seq.dir/profile_handle.cc.o.d -o CMakeFiles/ost_seq.dir/profile_handle.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/profile_handle.cc
[ 22%] Linking CXX shared library ../../../../stage/lib/libost_img_alg.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_img_alg.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/ost_img_alg.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_img_alg.so.2.9 -o ../../../../stage/lib/libost_img_alg.so.2.9.0 CMakeFiles/ost_img_alg.dir/anisotropic.cc.o CMakeFiles/ost_img_alg.dir/auto_correlate.cc.o CMakeFiles/ost_img_alg.dir/convolute.cc.o CMakeFiles/ost_img_alg.dir/correlate.cc.o CMakeFiles/ost_img_alg.dir/cross_correlate.cc.o CMakeFiles/ost_img_alg.dir/density_slice.cc.o CMakeFiles/ost_img_alg.dir/dft.cc.o CMakeFiles/ost_img_alg.dir/fft.cc.o CMakeFiles/ost_img_alg.dir/fourier_filters.cc.o CMakeFiles/ost_img_alg.dir/gaussian.cc.o CMakeFiles/ost_img_alg.dir/gaussian_gradient_magnitude.cc.o CMakeFiles/ost_img_alg.dir/gaussian_laplacian.cc.o CMakeFiles/ost_img_alg.dir/highest_peak_search_3d.cc.o CMakeFiles/ost_img_alg.dir/histogram.cc.o CMakeFiles/ost_img_alg.dir/line_iterator.cc.o CMakeFiles/ost_img_alg.dir/local_sigma_threshold.cc.o CMakeFiles/ost_img_alg.dir/mask_image.cc.o CMakeFiles/ost_img_alg.dir/normalizer.cc.o CMakeFiles/ost_img_alg.dir/normalizer_factory.cc.o CMakeFiles/ost_img_alg.dir/norm_linear.cc.o CMakeFiles/ost_img_alg.dir/norm_log.cc.o CMakeFiles/ost_img_alg.dir/norm_od.cc.o CMakeFiles/ost_img_alg.dir/power_spectrum.cc.o CMakeFiles/ost_img_alg.dir/randomize.cc.o CMakeFiles/ost_img_alg.dir/smooth_mask_image.cc.o CMakeFiles/ost_img_alg.dir/stat.cc.o CMakeFiles/ost_img_alg.dir/stat_min_max.cc.o CMakeFiles/ost_img_alg.dir/alg_transform.cc.o CMakeFiles/ost_img_alg.dir/alg_mirror.cc.o CMakeFiles/ost_img_alg.dir/alg_shift.cc.o CMakeFiles/ost_img_alg.dir/threshold.cc.o CMakeFiles/ost_img_alg.dir/discrete_shrink.cc.o CMakeFiles/ost_img_alg.dir/transformation_base.cc.o CMakeFiles/ost_img_alg.dir/transformations.cc.o CMakeFiles/ost_img_alg.dir/fractional_shift.cc.o CMakeFiles/ost_img_alg.dir/polar.cc.o CMakeFiles/ost_img_alg.dir/rscrosscorr.cc.o CMakeFiles/ost_img_alg.dir/line_average.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so ../../../../stage/lib/libost_img.so.2.9.0 ../../../../stage/lib/libost_info.so.2.9.0 ../../../../stage/lib/libost_base.so.2.9.0 ../../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E cmake_symlink_library ../../../../stage/lib/libost_img_alg.so.2.9.0 ../../../../stage/lib/libost_img_alg.so.2.9 ../../../../stage/lib/libost_img_alg.so
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 22%] Built target ost_img_alg
[ 22%] Linking CXX shared library ../../../../stage/lib/libost_seq.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_seq.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/ost_seq.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_seq.so.2.9 -o ../../../../stage/lib/libost_seq.so.2.9.0 CMakeFiles/ost_seq.dir/impl/sequence_impl.cc.o CMakeFiles/ost_seq.dir/impl/sequence_list_impl.cc.o CMakeFiles/ost_seq.dir/sequence_handle.cc.o CMakeFiles/ost_seq.dir/aligned_region.cc.o CMakeFiles/ost_seq.dir/aligned_column.cc.o CMakeFiles/ost_seq.dir/sequence_list.cc.o CMakeFiles/ost_seq.dir/alignment_handle.cc.o CMakeFiles/ost_seq.dir/sequence_op.cc.o CMakeFiles/ost_seq.dir/views_from_sequences.cc.o CMakeFiles/ost_seq.dir/profile_handle.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../../stage/lib/libost_mol.so.2.9.0 ../../../../stage/lib/libost_info.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 ../../../../stage/lib/libost_base.so.2.9.0 ../../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E cmake_symlink_library ../../../../stage/lib/libost_seq.so.2.9.0 ../../../../stage/lib/libost_seq.so.2.9 ../../../../stage/lib/libost_seq.so
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/bindings/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/src/CMakeFiles/ost_bindings.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/db/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src/CMakeFiles/ost_db.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/DependInfo.cmake "--color="
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[ 22%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/contact_prediction_score.cc.o
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[ 22%] Building CXX object modules/db/src/CMakeFiles/ost_db.dir/binary_container.cc.o
[ 22%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/conservation.cc.o
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[ 22%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/entropy.cc.o
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[ 23%] Building CXX object modules/db/src/CMakeFiles/ost_db.dir/linear_indexer.cc.o
[ 23%] Building CXX object modules/db/src/CMakeFiles/ost_db.dir/sqlite_wrap.cc.o
[ 23%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/global_align.cc.o
[ 23%] Building CXX object modules/db/src/CMakeFiles/ost_db.dir/extract_data_helper.cc.o
[ 23%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/merge_pairwise_alignments.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_DB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -DSQLITE_OMIT_LOAD_EXTENSION -Dost_db_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/db/src/CMakeFiles/ost_db.dir/binary_container.cc.o -MF CMakeFiles/ost_db.dir/binary_container.cc.o.d -o CMakeFiles/ost_db.dir/binary_container.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/db/src/binary_container.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_BINDINGS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_bindings_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/bindings/src/CMakeFiles/ost_bindings.dir/wrap_tmalign.cc.o -MF CMakeFiles/ost_bindings.dir/wrap_tmalign.cc.o.d -o CMakeFiles/ost_bindings.dir/wrap_tmalign.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/bindings/src/wrap_tmalign.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_DB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -DSQLITE_OMIT_LOAD_EXTENSION -Dost_db_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/db/src/CMakeFiles/ost_db.dir/sqlite_wrap.cc.o -MF CMakeFiles/ost_db.dir/sqlite_wrap.cc.o.d -o CMakeFiles/ost_db.dir/sqlite_wrap.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/db/src/sqlite_wrap.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/conservation.cc.o -MF CMakeFiles/ost_seq_alg.dir/conservation.cc.o.d -o CMakeFiles/ost_seq_alg.dir/conservation.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/conservation.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/clip_alignment.cc.o -MF CMakeFiles/ost_seq_alg.dir/clip_alignment.cc.o.d -o CMakeFiles/ost_seq_alg.dir/clip_alignment.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/clip_alignment.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_DB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -DSQLITE_OMIT_LOAD_EXTENSION -Dost_db_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/db/src/CMakeFiles/ost_db.dir/extract_data_helper.cc.o -MF CMakeFiles/ost_db.dir/extract_data_helper.cc.o.d -o CMakeFiles/ost_db.dir/extract_data_helper.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/db/src/extract_data_helper.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/entropy.cc.o -MF CMakeFiles/ost_seq_alg.dir/entropy.cc.o.d -o CMakeFiles/ost_seq_alg.dir/entropy.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/entropy.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/global_align.cc.o -MF CMakeFiles/ost_seq_alg.dir/global_align.cc.o.d -o CMakeFiles/ost_seq_alg.dir/global_align.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/global_align.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_DB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -DSQLITE_OMIT_LOAD_EXTENSION -Dost_db_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/db/src/CMakeFiles/ost_db.dir/linear_indexer.cc.o -MF CMakeFiles/ost_db.dir/linear_indexer.cc.o.d -o CMakeFiles/ost_db.dir/linear_indexer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/db/src/linear_indexer.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/contact_prediction_score.cc.o -MF CMakeFiles/ost_seq_alg.dir/contact_prediction_score.cc.o.d -o CMakeFiles/ost_seq_alg.dir/contact_prediction_score.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/contact_prediction_score.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/ins_del.cc.o -MF CMakeFiles/ost_seq_alg.dir/ins_del.cc.o.d -o CMakeFiles/ost_seq_alg.dir/ins_del.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/ins_del.cc
[ 23%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/contact_weight_matrix.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/merge_pairwise_alignments.cc.o -MF CMakeFiles/ost_seq_alg.dir/merge_pairwise_alignments.cc.o.d -o CMakeFiles/ost_seq_alg.dir/merge_pairwise_alignments.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/merge_pairwise_alignments.cc
[ 23%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/distance_map.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/contact_weight_matrix.cc.o -MF CMakeFiles/ost_seq_alg.dir/contact_weight_matrix.cc.o.d -o CMakeFiles/ost_seq_alg.dir/contact_weight_matrix.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/contact_weight_matrix.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/distance_map.cc.o -MF CMakeFiles/ost_seq_alg.dir/distance_map.cc.o.d -o CMakeFiles/ost_seq_alg.dir/distance_map.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/distance_map.cc
[ 23%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/pair_subst_weight_matrix.cc.o
[ 25%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/local_align.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/pair_subst_weight_matrix.cc.o -MF CMakeFiles/ost_seq_alg.dir/pair_subst_weight_matrix.cc.o.d -o CMakeFiles/ost_seq_alg.dir/pair_subst_weight_matrix.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/pair_subst_weight_matrix.cc
[ 23%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/sequence_identity.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/local_align.cc.o -MF CMakeFiles/ost_seq_alg.dir/local_align.cc.o.d -o CMakeFiles/ost_seq_alg.dir/local_align.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/local_align.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/sequence_identity.cc.o -MF CMakeFiles/ost_seq_alg.dir/sequence_identity.cc.o.d -o CMakeFiles/ost_seq_alg.dir/sequence_identity.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/sequence_identity.cc
[ 25%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/sequence_similarity.cc.o
[ 25%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/semiglobal_align.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/semiglobal_align.cc.o -MF CMakeFiles/ost_seq_alg.dir/semiglobal_align.cc.o.d -o CMakeFiles/ost_seq_alg.dir/semiglobal_align.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/semiglobal_align.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/sequence_similarity.cc.o -MF CMakeFiles/ost_seq_alg.dir/sequence_similarity.cc.o.d -o CMakeFiles/ost_seq_alg.dir/sequence_similarity.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/sequence_similarity.cc
[ 25%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/subst_weight_matrix.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/subst_weight_matrix.cc.o -MF CMakeFiles/ost_seq_alg.dir/subst_weight_matrix.cc.o.d -o CMakeFiles/ost_seq_alg.dir/subst_weight_matrix.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/subst_weight_matrix.cc
[ 25%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/variance_map.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/variance_map.cc.o -MF CMakeFiles/ost_seq_alg.dir/variance_map.cc.o.d -o CMakeFiles/ost_seq_alg.dir/variance_map.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/variance_map.cc
In file included from /build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/param_set.h:7,
                 from /build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h:6,
                 from /build/reproducible-path/openstructure-2.9.0/modules/bindings/src/wrap_tmalign.cc:20:
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/basic_fun.h: In function 'void file2chainlist(std::vector<std::__cxx11::basic_string<char> >&, const std::string&, const std::string&, const std::string&)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/basic_fun.h:833:11: warning: unused variable 'b' [-Wunused-variable]
  833 |     int a,b;
      |           ^
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/basic_fun.h: In function 'void file2chainpairlist(std::vector<std::__cxx11::basic_string<char> >&, std::vector<std::__cxx11::basic_string<char> >&, const std::string&, const std::string&, const std::string&)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/basic_fun.h:897:13: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
  897 |             for (i=0;i<2;i++) line_vec[i].clear(); line_vec.clear();
      |             ^~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/basic_fun.h:897:52: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
  897 |             for (i=0;i<2;i++) line_vec[i].clear(); line_vec.clear();
      |                                                    ^~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/basic_fun.h:901:13: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
  901 |             for (i=0;i<line_vec.size();i++) line_vec[i].clear(); line_vec.clear();
      |             ^~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/basic_fun.h:901:66: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
  901 |             for (i=0;i<line_vec.size();i++) line_vec[i].clear(); line_vec.clear();
      |                                                                  ^~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/basic_fun.h:907:17: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
  907 |                 for (i=0;i<2;i++) line_vec[i].clear(); line_vec.clear();
      |                 ^~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/basic_fun.h:907:56: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
  907 |                 for (i=0;i<2;i++) line_vec[i].clear(); line_vec.clear();
      |                                                        ^~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/basic_fun.h:912:17: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
  912 |                 for (i=0;i<line_vec.size();i++) line_vec[i].clear(); line_vec.clear();
      |                 ^~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/basic_fun.h:912:70: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
  912 |                 for (i=0;i<line_vec.size();i++) line_vec[i].clear(); line_vec.clear();
      |                                                                      ^~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/basic_fun.h:883:11: warning: unused variable 'b' [-Wunused-variable]
  883 |     int a,b;
      |           ^
In file included from /build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h:7:
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/NW.h: In function 'void NWDP_SE(bool**, double**, double**, double**, int, int, double, double, int*, int)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/NW.h:275:9: warning: unused variable 'int_min' [-Wunused-variable]
  275 |     int int_min=L*(gap_open-1);
      |         ^~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/NW.h:287:9: warning: unused variable 'k' [-Wunused-variable]
  287 |     int k=0;
      |         ^
In file included from /build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h:9:
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/NWalign.h: In function 'int NWalign_main(const char*, const char*, int, int, std::string&, std::string&, int, int*, int, int)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/NWalign.h:415:41: warning: array subscript has type 'char' [-Wchar-subscripts]
  415 |             else S[i][j]=BLOSUM[seqx[i-1]][seqy[j-1]];
      |                                 ~~~~~~~~^
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/NWalign.h:415:52: warning: array subscript has type 'char' [-Wchar-subscripts]
  415 |             else S[i][j]=BLOSUM[seqx[i-1]][seqy[j-1]];
      |                                            ~~~~~~~~^
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/NWalign.h: In function 'void get_seqID(const std::string&, const std::string&, std::string&, double&, int&)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/NWalign.h:458:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  458 |     for (int i=0;i<seqxA.size();i++)
      |                  ~^~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/NWalign.h: In function 'int extract_aln_from_resi(std::vector<std::__cxx11::basic_string<char> >&, char*, char*, std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, std::vector<int>, std::vector<int>, int, int, int)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/NWalign.h:715:14: warning: statement has no effect [-Wunused-value]
  715 |         for (i;i<xlen;i++)
      |              ^
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/NWalign.h:723:14: warning: statement has no effect [-Wunused-value]
  723 |         for (j;j<ylen;j++)
      |              ^
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h: In function 'void make_sec(char*, double**, int, char*, std::string)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h:878:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  878 |     for (i=0;i<A0_var.size();i++)
      |              ~^~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h: In function 'void output_pymol(std::string, std::string, std::string, double*, double (*)[3], int, int, int, int, const char*, const char*, const char*, const std::vector<std::__cxx11::basic_string<char> >&, const std::vector<std::__cxx11::basic_string<char> >&, std::string, std::string)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h:1604:38: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'std::map<std::__cxx11::basic_string<char>, int>::mapped_type' {aka 'int'} [-Wsign-compare]
 1604 |                     if (atom_site_pos==_atom_site["Cartn_x"])
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h:1607:43: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'std::map<std::__cxx11::basic_string<char>, int>::mapped_type' {aka 'int'} [-Wsign-compare]
 1607 |                     else if (atom_site_pos==_atom_site["Cartn_y"])
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h:1610:43: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'std::map<std::__cxx11::basic_string<char>, int>::mapped_type' {aka 'int'} [-Wsign-compare]
 1610 |                     else if (atom_site_pos==_atom_site["Cartn_z"])
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h:1653:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1653 |             for (i=1;i<chainID1.size();i++) if (chainID1[i]==',') break;
      |                      ~^~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h:1655:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1655 |             for (i=1;i<chainID2.size();i++) if (chainID2[i]==',') break;
      |                      ~^~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h:1677:19: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
 1677 |         for (i=0;i<strlen(seqM);i++)
      |                  ~^~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h:1716:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1716 |     for (int p=0;p<pml_list.size();p++)
      |                  ~^~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h: In function 'void output_rasmol(std::string, std::string, std::string, double*, double (*)[3], int, int, int, int, const char*, const char*, const char*, const std::vector<std::__cxx11::basic_string<char> >&, const std::vector<std::__cxx11::basic_string<char> >&, std::string, std::string, int, int, double, int, double, double, double)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h:1855:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1855 |             for (i=1;i<chainID1.size();i++) if (chainID1[i]==',') break;
      |                      ~^~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h:1857:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1857 |             for (i=1;i<chainID2.size();i++) if (chainID2[i]==',') break;
      |                      ~^~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h:1890:19: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
 1890 |         for (i=0;i<strlen(seqM);i++)
      |                  ~^~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h:2162:28: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 2162 |     if (!mm_opt) for (i=1;i<idx_vec.size();i++) buf<<"CONECT"
      |                           ~^~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h:2372:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 2372 |     for (i=1;i<idx_vec.size();i++) buf<<"CONECT"
      |              ~^~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h: In function 'int TMalign_main(double**, double**, const char*, const char*, const char*, const char*, double*, double (*)[3], double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, std::string&, std::string&, std::string&, double&, int&, double&, double&, double&, int&, int&, int, int, std::vector<std::__cxx11::basic_string<char> >, double, double, int, int, bool, bool, bool, int, double)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h:3289:12: warning: variable 'Lnorm_d0' set but not used [-Wunused-but-set-variable]
 3289 |     double Lnorm_d0;
      |            ^~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h: In function 'int CPalign_main(double**, double**, const char*, const char*, const char*, const char*, double*, double (*)[3], double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, std::string&, std::string&, std::string&, double&, int&, double&, double&, double&, int&, int&, int, int, std::vector<std::__cxx11::basic_string<char> >, double, double, int, int, bool, bool, bool, int, double)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h:3467:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 3467 |     for (i=0;i<seqxA_cp.size();i++)
      |              ~^~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h:3572:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 3572 |         for (i=0;i<seqxA_cp.size();i++)
      |                  ~^~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h: In function 'bool output_cp(const std::string&, const std::string&, const std::string&, const std::string&, int, int&, int&, int&, int&)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/TMalign.h:3606:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 3606 |     for (r=0;r<seqxA.size();r++)
      |              ~^~~~~~~~~~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h:2,
                 from /build/reproducible-path/openstructure-2.9.0/modules/bindings/src/wrap_tmalign.cc:21:
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/se.h: In function 'int se_main(double**, double**, const char*, const char*, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, std::string&, std::string&, std::string&, double&, int&, double&, double&, double&, int&, int&, int, int, const std::vector<std::__cxx11::basic_string<char> >&, double, double, bool, bool, int, bool, int, int, int*, int)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/se.h:52:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   52 |         for (int r=0;r<seqM.size();r++)
      |                      ~^~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/se.h:222:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  222 |         for (int r=0;r<seqM.size();r++)
      |                      ~^~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/se.h:44:9: warning: unused variable 'i' [-Wunused-variable]
   44 |     int i,j;
      |         ^
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h: In function 'double homo_refined_greedy_search(double**, int*, int*, int, int, double**, double**, double, int, double**)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h:440:12: warning: unused variable 'TMnow' [-Wunused-variable]
  440 |     double TMnow  =0;
      |            ^~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h:441:12: warning: unused variable 'TMmax' [-Wunused-variable]
  441 |     double TMmax  =0;
      |            ^~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h: In function 'void clear_full_PDB_lines(std::vector<std::vector<std::__cxx11::basic_string<char> > >, std::string)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h:670:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::vector<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  670 |     for (chain_i=0;chain_i<PDB_lines.size();chain_i++)
      |                    ~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h:673:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  673 |         for (a=0;a<PDB_lines[chain_i].size();a++)
      |                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h:687:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  687 |             for (a=0;a<PDB_lines[chain_i].size();a++)
      |                      ~^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h: In function 'void output_dock(const std::vector<std::__cxx11::basic_string<char> >&, int, int, int, std::string, int, double**, const std::string&)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h:1010:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1010 |             for (a=0;a<PDB_lines[chain_i].size();a++)
      |                      ~^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h: In function 'int copy_chain_pair_data(const std::vector<std::vector<std::vector<double> > >&, const std::vector<std::vector<std::vector<double> > >&, const std::vector<std::vector<char> >&, const std::vector<std::vector<char> >&, const std::vector<std::vector<char> >&, const std::vector<std::vector<char> >&, const std::vector<int>&, const std::vector<int>&, const std::vector<int>&, const std::vector<int>&, double**, double**, char*, char*, char*, char*, int, int, std::vector<std::vector<std::__cxx11::basic_string<char> > >&, std::vector<std::vector<std::__cxx11::basic_string<char> > >&, int*, int*, std::vector<std::__cxx11::basic_string<char> >&)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h:1166:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1166 |     for (i=0;i<sequence.size();i++) sequence[i].clear();
      |              ~^~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h: In function 'void copy_chain_assign_data(int, int, std::vector<std::__cxx11::basic_string<char> >&, std::vector<std::vector<std::__cxx11::basic_string<char> > >&, std::vector<std::vector<std::__cxx11::basic_string<char> > >&, int*, int*, double**, std::vector<std::vector<std::__cxx11::basic_string<char> > >&, std::vector<std::vector<std::__cxx11::basic_string<char> > >&, int*, int*, double**)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h:1593:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1593 |     for (i=0;i<sequence.size();i++) sequence[i].clear();
      |              ~^~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h: In function 'int TMalign_dimer_main(double**, double**, const char*, const char*, const char*, const char*, double*, double (*)[3], double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, std::string&, std::string&, std::string&, double&, int&, double&, double&, double&, int&, int&, int, int, bool**, std::vector<std::__cxx11::basic_string<char> >, double, double, int, int, bool, bool, bool, int, double)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h:2542:12: warning: variable 'Lnorm_d0' set but not used [-Wunused-but-set-variable]
 2542 |     double Lnorm_d0;
      |            ^~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h: In function 'void MMalign_dimer(double&, const std::vector<std::vector<std::vector<double> > >&, const std::vector<std::vector<std::vector<double> > >&, const std::vector<std::vector<char> >&, const std::vector<std::vector<char> >&, const std::vector<std::vector<char> >&, const std::vector<std::vector<char> >&, const std::vector<int>&, const std::vector<int>&, const std::vector<int>&, const std::vector<int>&, double**, double**, char*, char*, char*, char*, int, int, int, int, double**, std::vector<std::vector<std::__cxx11::basic_string<char> > >&, std::vector<std::vector<std::__cxx11::basic_string<char> > >&, int*, int*, std::vector<std::__cxx11::basic_string<char> >&, double, bool)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h:2694:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 2694 |     for (c=0;c<xlen_dimer.size();c++)
      |              ~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h: In function 'void writeTrimComplex(std::vector<std::vector<std::vector<double> > >&, std::vector<std::vector<char> >&, std::vector<int>&, std::vector<std::__cxx11::basic_string<char> >&, std::vector<int>&, const std::string&, std::string)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h:2993:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 2993 |     for (c=0;c<chainID_list.size();c++)
      |              ~^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h: In function 'void output_dock_rotation_matrix(const char*, const std::vector<std::__cxx11::basic_string<char> >&, const std::vector<std::__cxx11::basic_string<char> >&, double**, int*)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h:3030:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 3030 |         for (i=0;i<xname_vec.size();i++)
      |                  ~^~~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/sequence_similarity.cc: In function 'Real ost::seq::alg::SequenceSimilarity(const ost::seq::AlignmentHandle&, SubstWeightMatrixPtr, bool, int, int)':
/build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/sequence_similarity.cc:31:17: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   31 |   const String& sa=aln.GetSequence(seq_a).GetString();
      |                 ^~
/build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/sequence_similarity.cc:31:52: note: the temporary was destroyed at the end of the full expression 'ost::seq::AlignmentHandle::GetSequence(int) const(seq_a).ost::seq::ConstSequenceHandle::GetString()'
   31 |   const String& sa=aln.GetSequence(seq_a).GetString();
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/sequence_similarity.cc:32:17: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   32 |   const String& sb=aln.GetSequence(seq_b).GetString();
      |                 ^~
/build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/sequence_similarity.cc:32:52: note: the temporary was destroyed at the end of the full expression 'ost::seq::AlignmentHandle::GetSequence(int) const(seq_b).ost::seq::ConstSequenceHandle::GetString()'
   32 |   const String& sb=aln.GetSequence(seq_b).GetString();
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
[ 25%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/hmm_pseudo_counts.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/hmm_pseudo_counts.cc.o -MF CMakeFiles/ost_seq_alg.dir/hmm_pseudo_counts.cc.o.d -o CMakeFiles/ost_seq_alg.dir/hmm_pseudo_counts.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/hmm_pseudo_counts.cc
[ 25%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/hmm_score.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/hmm_score.cc.o -MF CMakeFiles/ost_seq_alg.dir/hmm_score.cc.o.d -o CMakeFiles/ost_seq_alg.dir/hmm_score.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/hmm_score.cc
[ 25%] Building CXX object modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/wrap_parasail.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_SEQ_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/wrap_parasail.cc.o -MF CMakeFiles/ost_seq_alg.dir/wrap_parasail.cc.o.d -o CMakeFiles/ost_seq_alg.dir/wrap_parasail.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/wrap_parasail.cc
In file included from /usr/include/c++/14/string:54,
                 from /usr/include/boost/assert/source_location.hpp:15,
                 from /usr/include/boost/exception/exception.hpp:9,
                 from /usr/include/boost/throw_exception.hpp:21,
                 from /usr/include/boost/smart_ptr/detail/shared_count.hpp:31,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:18,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/impl/sequence_list_impl_fw.hh:27,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alignment_handle.hh:27,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/aligned_column.hh:26,
                 from /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/conservation.cc:20:
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:904:15,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'std::vector<float> ost::seq::alg::Conservation(const ost::seq::AlignmentHandle&, bool, const String&, bool)' at /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/conservation.cc:128:27:
/usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized]
 1084 |       { return _M_string_length; }
      |                ^~~~~~~~~~~~~~~~
In file included from /usr/include/boost/variant.hpp:17,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:34,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/sequence_handle.hh:27,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alignment_handle.hh:28:
/usr/include/boost/variant/variant.hpp: In function 'std::vector<float> ost::seq::alg::Conservation(const ost::seq::AlignmentHandle&, bool, const String&, bool)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In file included from /usr/include/c++/14/string:42:
In static member function 'static constexpr void std::char_traits<char>::assign(char_type&, const char_type&)',
    inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:433:23,
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:882:18,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'std::vector<float> ost::seq::alg::Conservation(const ost::seq::AlignmentHandle&, bool, const String&, bool)' at /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/conservation.cc:128:27:
/usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits<char>::char_type*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized]
  350 |         __c1 = __c2;
      |                ^~~~
/usr/include/boost/variant/variant.hpp: In function 'std::vector<float> ost::seq::alg::Conservation(const ost::seq::AlignmentHandle&, bool, const String&, bool)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'std::vector<float> ost::seq::alg::Conservation(const ost::seq::AlignmentHandle&, bool, const String&, bool)' at /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/conservation.cc:128:27:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'std::vector<float> ost::seq::alg::Conservation(const ost::seq::AlignmentHandle&, bool, const String&, bool)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'std::vector<float> ost::seq::alg::Conservation(const ost::seq::AlignmentHandle&, bool, const String&, bool)' at /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/conservation.cc:128:27:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'std::vector<float> ost::seq::alg::Conservation(const ost::seq::AlignmentHandle&, bool, const String&, bool)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/wrap_tmalign.cc: In function 'void ost::bindings::parse_chain_list_hacked(const std::vector<geom::Vec3List>&, const ost::seq::SequenceList&, const std::vector<bool>&, const std::vector<std::__cxx11::basic_string<char> >&, std::vector<std::vector<std::vector<double> > >&, std::vector<std::vector<char> >&, std::vector<std::vector<char> >&, std::vector<int>&, std::vector<int>&, std::vector<std::__cxx11::basic_string<char> >&, int, int, std::string, int, std::string, int, int, int&, int&, int, std::vector<std::__cxx11::basic_string<char> >&)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/wrap_tmalign.cc:263:24: warning: possibly dangling reference to a temporary [-Wdangling-reference]
  263 |     const std::string& s = seq[i].GetString();
      |                        ^
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/wrap_tmalign.cc:263:44: note: the temporary was destroyed at the end of the full expression 'ost::seq::SequenceList::operator[](int) const(i).ost::seq::SequenceHandle::GetString()'
  263 |     const std::string& s = seq[i].GetString();
      |                            ~~~~~~~~~~~~~~~~^~
/build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/sequence_identity.cc: In function 'Real ost::seq::alg::SequenceIdentity(const ost::seq::AlignmentHandle&, RefMode::Type, int, int)':
/build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/sequence_identity.cc:33:17: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   33 |   const String& sa=aln.GetSequence(seq_a).GetString();
      |                 ^~
/build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/sequence_identity.cc:33:52: note: the temporary was destroyed at the end of the full expression 'ost::seq::AlignmentHandle::GetSequence(int) const(seq_a).ost::seq::ConstSequenceHandle::GetString()'
   33 |   const String& sa=aln.GetSequence(seq_a).GetString();
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/sequence_identity.cc:34:17: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   34 |   const String& sb=aln.GetSequence(seq_b).GetString();
      |                 ^~
/build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/sequence_identity.cc:34:52: note: the temporary was destroyed at the end of the full expression 'ost::seq::AlignmentHandle::GetSequence(int) const(seq_b).ost::seq::ConstSequenceHandle::GetString()'
   34 |   const String& sb=aln.GetSequence(seq_b).GetString();
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
[ 25%] Linking CXX shared library ../../../stage/lib/libost_db.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_db.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/ost_db.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_db.so.2.9 -o ../../../stage/lib/libost_db.so.2.9.0 CMakeFiles/ost_db.dir/sqlite_wrap.cc.o CMakeFiles/ost_db.dir/linear_indexer.cc.o CMakeFiles/ost_db.dir/binary_container.cc.o CMakeFiles/ost_db.dir/extract_data_helper.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_seq.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../stage/lib/libost_mol.so.2.9.0 ../../../stage/lib/libost_info.so.2.9.0 ../../../stage/lib/libost_base.so.2.9.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E cmake_symlink_library ../../../stage/lib/libost_db.so.2.9.0 ../../../stage/lib/libost_db.so.2.9 ../../../stage/lib/libost_db.so
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
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make  -f modules/conop/src/CMakeFiles/ost_conop.dir/build.make modules/conop/src/CMakeFiles/ost_conop.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/conop/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src/CMakeFiles/ost_conop.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 25%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/amino_acids.cc.o
[ 25%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/compound_lib_base.cc.o
[ 25%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/minimal_compound_lib.cc.o
[ 26%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/processor.cc.o
[ 26%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/heuristic.cc.o
[ 26%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/rule_based.cc.o
[ 26%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/diag.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/processor.cc.o -MF CMakeFiles/ost_conop.dir/processor.cc.o.d -o CMakeFiles/ost_conop.dir/processor.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/src/processor.cc
[ 26%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/model_check.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/amino_acids.cc.o -MF CMakeFiles/ost_conop.dir/amino_acids.cc.o.d -o CMakeFiles/ost_conop.dir/amino_acids.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/src/amino_acids.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/minimal_compound_lib.cc.o -MF CMakeFiles/ost_conop.dir/minimal_compound_lib.cc.o.d -o CMakeFiles/ost_conop.dir/minimal_compound_lib.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/src/minimal_compound_lib.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/compound_lib_base.cc.o -MF CMakeFiles/ost_conop.dir/compound_lib_base.cc.o.d -o CMakeFiles/ost_conop.dir/compound_lib_base.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/src/compound_lib_base.cc
[ 26%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/conop.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/heuristic.cc.o -MF CMakeFiles/ost_conop.dir/heuristic.cc.o.d -o CMakeFiles/ost_conop.dir/heuristic.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/src/heuristic.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/conop.cc.o -MF CMakeFiles/ost_conop.dir/conop.cc.o.d -o CMakeFiles/ost_conop.dir/conop.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/src/conop.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/diag.cc.o -MF CMakeFiles/ost_conop.dir/diag.cc.o.d -o CMakeFiles/ost_conop.dir/diag.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/src/diag.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/rule_based.cc.o -MF CMakeFiles/ost_conop.dir/rule_based.cc.o.d -o CMakeFiles/ost_conop.dir/rule_based.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/src/rule_based.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/model_check.cc.o -MF CMakeFiles/ost_conop.dir/model_check.cc.o.d -o CMakeFiles/ost_conop.dir/model_check.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/src/model_check.cc
[ 26%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/compound_lib.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/compound_lib.cc.o -MF CMakeFiles/ost_conop.dir/compound_lib.cc.o.d -o CMakeFiles/ost_conop.dir/compound_lib.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/src/compound_lib.cc
[ 26%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/compound.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/compound.cc.o -MF CMakeFiles/ost_conop.dir/compound.cc.o.d -o CMakeFiles/ost_conop.dir/compound.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/src/compound.cc
[ 27%] Building CXX object modules/conop/src/CMakeFiles/ost_conop.dir/ring_finder.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_CONOP -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/src/CMakeFiles/ost_conop.dir/ring_finder.cc.o -MF CMakeFiles/ost_conop.dir/ring_finder.cc.o.d -o CMakeFiles/ost_conop.dir/ring_finder.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/src/ring_finder.cc
/build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/hmm_pseudo_counts.cc: In static member function 'static ost::seq::alg::ContextProfileDBPtr ost::seq::alg::ContextProfileDB::FromCRF(const String&)':
/build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/hmm_pseudo_counts.cc:146:56: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations]
  146 |   if(boost::iequals(".gz", boost::filesystem::extension(filename))) {
      |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/hmm_pseudo_counts.cc:4:
/usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here
   29 | inline std::string extension(const path& p)
      |                    ^~~~~~~~~
In file included from /usr/include/c++/14/string:54,
                 from /usr/include/c++/14/bits/locale_classes.h:40,
                 from /usr/include/c++/14/bits/ios_base.h:41,
                 from /usr/include/c++/14/ios:44,
                 from /usr/include/c++/14/istream:40,
                 from /usr/include/c++/14/sstream:40,
                 from /usr/include/c++/14/complex:45,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/base.hh:24,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/module_config.hh:22,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_handle.hh:22,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mol.hh:22,
                 from /build/reproducible-path/openstructure-2.9.0/modules/conop/src/ring_finder.cc:19:
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:904:15,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetBoolProp(const String&, bool) [with H = ost::mol::BondHandle]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:372:38:
/usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized]
 1084 |       { return _M_string_length; }
      |                ^~~~~~~~~~~~~~~~
In file included from /usr/include/boost/variant.hpp:17,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/query.hh:30,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_handle.hh:26:
/usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer<H>::SetBoolProp(const String&, bool) [with H = ost::mol::BondHandle]':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In file included from /usr/include/c++/14/ios:42:
In static member function 'static constexpr void std::char_traits<char>::assign(char_type&, const char_type&)',
    inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:433:23,
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:882:18,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetBoolProp(const String&, bool) [with H = ost::mol::BondHandle]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:372:38:
/usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits<char>::char_type*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized]
  350 |         __c1 = __c2;
      |                ^~~~
/usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer<H>::SetBoolProp(const String&, bool) [with H = ost::mol::BondHandle]':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetBoolProp(const String&, bool) [with H = ost::mol::BondHandle]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:372:38:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer<H>::SetBoolProp(const String&, bool) [with H = ost::mol::BondHandle]':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetBoolProp(const String&, bool) [with H = ost::mol::BondHandle]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:372:38:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer<H>::SetBoolProp(const String&, bool) [with H = ost::mol::BondHandle]':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/NWalign.h: In function 'int extract_aln_from_resi(std::vector<std::__cxx11::basic_string<char> >&, char*, char*, std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, std::vector<int>, std::vector<int>, int, int, int)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/NWalign.h:686:21: warning: 'invmap' may be used uninitialized [-Wmaybe-uninitialized]
  686 |         NWalign_main(seqx, seqy, xlen, ylen, sequence[0],sequence[1],
      |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  687 |             mol_type, invmap, 0, glocal);
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/NWalign.h:676:14: note: 'invmap' was declared here
  676 |         int *invmap;
      |              ^~~~~~
[ 28%] Linking CXX shared library ../../../../stage/lib/libost_seq_alg.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_seq_alg.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/ost_seq_alg.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_seq_alg.so.2.9 -o ../../../../stage/lib/libost_seq_alg.so.2.9.0 CMakeFiles/ost_seq_alg.dir/clip_alignment.cc.o CMakeFiles/ost_seq_alg.dir/conservation.cc.o CMakeFiles/ost_seq_alg.dir/contact_prediction_score.cc.o CMakeFiles/ost_seq_alg.dir/contact_weight_matrix.cc.o CMakeFiles/ost_seq_alg.dir/distance_map.cc.o CMakeFiles/ost_seq_alg.dir/entropy.cc.o CMakeFiles/ost_seq_alg.dir/global_align.cc.o CMakeFiles/ost_seq_alg.dir/ins_del.cc.o CMakeFiles/ost_seq_alg.dir/local_align.cc.o CMakeFiles/ost_seq_alg.dir/merge_pairwise_alignments.cc.o CMakeFiles/ost_seq_alg.dir/pair_subst_weight_matrix.cc.o CMakeFiles/ost_seq_alg.dir/semiglobal_align.cc.o CMakeFiles/ost_seq_alg.dir/sequence_identity.cc.o CMakeFiles/ost_seq_alg.dir/sequence_similarity.cc.o CMakeFiles/ost_seq_alg.dir/subst_weight_matrix.cc.o CMakeFiles/ost_seq_alg.dir/variance_map.cc.o CMakeFiles/ost_seq_alg.dir/hmm_pseudo_counts.cc.o CMakeFiles/ost_seq_alg.dir/hmm_score.cc.o CMakeFiles/ost_seq_alg.dir/wrap_parasail.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: /usr/lib/x86_64-linux-gnu/libparasail.so ../../../../stage/lib/libost_seq.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../../stage/lib/libost_mol.so.2.9.0 ../../../../stage/lib/libost_info.so.2.9.0 ../../../../stage/lib/libost_base.so.2.9.0 ../../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E cmake_symlink_library ../../../../stage/lib/libost_seq_alg.so.2.9.0 ../../../../stage/lib/libost_seq_alg.so.2.9 ../../../../stage/lib/libost_seq_alg.so
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 28%] Built target ost_seq_alg
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/NWalign.h: In function 'int extract_aln_from_resi(std::vector<std::__cxx11::basic_string<char> >&, char*, char*, std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >, int)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/NWalign.h:545:21: warning: 'invmap' may be used uninitialized [-Wmaybe-uninitialized]
  545 |         NWalign_main(seqx, seqy, xlen, ylen, sequence[0],sequence[1],
      |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  546 |             mol_type, invmap, 0, glocal);
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/NWalign.h:535:14: note: 'invmap' was declared here
  535 |         int *invmap;
      |              ^~~~~~
[ 28%] Linking CXX shared module ../../../stage/lib/python3.12/dist-packages/ost/info/_ost_info.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_info.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/_ost_info.dir/link.d -Wl,-z,relro -shared  -o ../../../stage/lib/python3.12/dist-packages/ost/info/_ost_info.so CMakeFiles/_ost_info.dir/wrap_info.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_info.so.2.9.0 /usr/lib/x86_64-linux-gnu/libpython3.12.so /usr/lib/x86_64-linux-gnu/libboost_python312.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 ../../../stage/lib/libost_base.so.2.9.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/info/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/info/./__init__.pyc\",\"__init__.py\",doraise=True)"
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/img/base/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/pymod/CMakeFiles/_ost_img.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_atom_view.cc.o -MF CMakeFiles/_ost_mol.dir/export_atom_view.cc.o.d -o CMakeFiles/_ost_mol.dir/export_atom_view.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/export_atom_view.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_bond.cc.o -MF CMakeFiles/_ost_mol.dir/export_bond.cc.o.d -o CMakeFiles/_ost_mol.dir/export_bond.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/export_bond.cc
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[ 28%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_coord_frame.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_data.cc.o -MF CMakeFiles/_ost_img.dir/export_data.cc.o.d -o CMakeFiles/_ost_img.dir/export_data.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/pymod/export_data.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_atom.cc.o -MF CMakeFiles/_ost_mol.dir/export_atom.cc.o.d -o CMakeFiles/_ost_mol.dir/export_atom.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/export_atom.cc
[ 28%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_phase.cc.o
[ 28%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_peak.cc.o
[ 28%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_editors.cc.o
[ 28%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_coord_group.cc.o
[ 28%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_image_handle.cc.o
[ 28%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_extent.cc.o
[ 28%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_point.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_phase.cc.o -MF CMakeFiles/_ost_img.dir/export_phase.cc.o.d -o CMakeFiles/_ost_img.dir/export_phase.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/pymod/export_phase.cc
[ 28%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_entity.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_peak.cc.o -MF CMakeFiles/_ost_img.dir/export_peak.cc.o.d -o CMakeFiles/_ost_img.dir/export_peak.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/pymod/export_peak.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_chain.cc.o -MF CMakeFiles/_ost_mol.dir/export_chain.cc.o.d -o CMakeFiles/_ost_mol.dir/export_chain.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/export_chain.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_image_handle.cc.o -MF CMakeFiles/_ost_img.dir/export_image_handle.cc.o.d -o CMakeFiles/_ost_img.dir/export_image_handle.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/pymod/export_image_handle.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_extent.cc.o -MF CMakeFiles/_ost_img.dir/export_extent.cc.o.d -o CMakeFiles/_ost_img.dir/export_extent.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/pymod/export_extent.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_chain_view.cc.o -MF CMakeFiles/_ost_mol.dir/export_chain_view.cc.o.d -o CMakeFiles/_ost_mol.dir/export_chain_view.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/export_chain_view.cc
[ 28%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_data_algorithm.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_point.cc.o -MF CMakeFiles/_ost_img.dir/export_point.cc.o.d -o CMakeFiles/_ost_img.dir/export_point.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/pymod/export_point.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_coord_group.cc.o -MF CMakeFiles/_ost_mol.dir/export_coord_group.cc.o.d -o CMakeFiles/_ost_mol.dir/export_coord_group.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/export_coord_group.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_data_algorithm.cc.o -MF CMakeFiles/_ost_img.dir/export_data_algorithm.cc.o.d -o CMakeFiles/_ost_img.dir/export_data_algorithm.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/pymod/export_data_algorithm.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_coord_frame.cc.o -MF CMakeFiles/_ost_mol.dir/export_coord_frame.cc.o.d -o CMakeFiles/_ost_mol.dir/export_coord_frame.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/export_coord_frame.cc
[ 28%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_raster_image.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_editors.cc.o -MF CMakeFiles/_ost_mol.dir/export_editors.cc.o.d -o CMakeFiles/_ost_mol.dir/export_editors.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/export_editors.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_raster_image.cc.o -MF CMakeFiles/_ost_img.dir/export_raster_image.cc.o.d -o CMakeFiles/_ost_img.dir/export_raster_image.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/pymod/export_raster_image.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_entity.cc.o -MF CMakeFiles/_ost_mol.dir/export_entity.cc.o.d -o CMakeFiles/_ost_mol.dir/export_entity.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/export_entity.cc
[ 30%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_progress.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_progress.cc.o -MF CMakeFiles/_ost_img.dir/export_progress.cc.o.d -o CMakeFiles/_ost_img.dir/export_progress.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/pymod/export_progress.cc
[ 30%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_size.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_size.cc.o -MF CMakeFiles/_ost_img.dir/export_size.cc.o.d -o CMakeFiles/_ost_img.dir/export_size.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/pymod/export_size.cc
[ 30%] Linking CXX shared library ../../../stage/lib/libost_conop.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_conop.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/ost_conop.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_conop.so.2.9 -o ../../../stage/lib/libost_conop.so.2.9.0 CMakeFiles/ost_conop.dir/processor.cc.o CMakeFiles/ost_conop.dir/amino_acids.cc.o CMakeFiles/ost_conop.dir/conop.cc.o CMakeFiles/ost_conop.dir/minimal_compound_lib.cc.o CMakeFiles/ost_conop.dir/compound_lib_base.cc.o CMakeFiles/ost_conop.dir/heuristic.cc.o CMakeFiles/ost_conop.dir/diag.cc.o CMakeFiles/ost_conop.dir/rule_based.cc.o CMakeFiles/ost_conop.dir/model_check.cc.o CMakeFiles/ost_conop.dir/compound.cc.o CMakeFiles/ost_conop.dir/compound_lib.cc.o CMakeFiles/ost_conop.dir/ring_finder.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_db.so.2.9.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_seq.so.2.9.0 ../../../stage/lib/libost_mol.so.2.9.0 ../../../stage/lib/libost_info.so.2.9.0 ../../../stage/lib/libost_base.so.2.9.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E cmake_symlink_library ../../../stage/lib/libost_conop.so.2.9.0 ../../../stage/lib/libost_conop.so.2.9 ../../../stage/lib/libost_conop.so
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 30%] Built target ost_conop
make  -f modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/build.make modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/build.make modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/build
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 30%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/svd_superpose.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/svd_superpose.cc.o -MF CMakeFiles/ost_mol_alg.dir/svd_superpose.cc.o.d -o CMakeFiles/ost_mol_alg.dir/svd_superpose.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/svd_superpose.cc
[ 30%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_mask.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_mask.cc.o -MF CMakeFiles/_ost_img.dir/export_mask.cc.o.d -o CMakeFiles/_ost_img.dir/export_mask.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/pymod/export_mask.cc
[ 30%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_image_list.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_image_list.cc.o -MF CMakeFiles/_ost_img.dir/export_image_list.cc.o.d -o CMakeFiles/_ost_img.dir/export_image_list.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/pymod/export_image_list.cc
[ 30%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_entity_view.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_entity_view.cc.o -MF CMakeFiles/_ost_mol.dir/export_entity_view.cc.o.d -o CMakeFiles/_ost_mol.dir/export_entity_view.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/export_entity_view.cc
In file included from /usr/include/x86_64-linux-gnu/c++/14/bits/c++allocator.h:33,
                 from /usr/include/c++/14/bits/allocator.h:46,
                 from /usr/include/c++/14/string:43,
                 from /usr/include/c++/14/bits/locale_classes.h:40,
                 from /usr/include/c++/14/bits/ios_base.h:41,
                 from /usr/include/c++/14/ios:44,
                 from /usr/include/c++/14/istream:40,
                 from /usr/include/c++/14/sstream:40,
                 from /build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/basic_fun.h:12:
In member function 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = std::pair<double, int>; _Args = {std::pair<double, int>}; _Tp = std::pair<double, int>]',
    inlined from 'static void std::allocator_traits<std::allocator<_CharT> >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = std::pair<double, int>; _Args = {std::pair<double, int>}; _Tp = std::pair<double, int>]' at /usr/include/c++/14/bits/alloc_traits.h:569:17,
    inlined from 'void std::vector<_Tp, _Alloc>::_M_realloc_append(_Args&& ...) [with _Args = {std::pair<double, int>}; _Tp = std::pair<double, int>; _Alloc = std::allocator<std::pair<double, int> >]' at /usr/include/c++/14/bits/vector.tcc:634:26,
    inlined from 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<double, int>}; _Tp = std::pair<double, int>; _Alloc = std::allocator<std::pair<double, int> >]' at /usr/include/c++/14/bits/vector.tcc:123:21,
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::pair<double, int>; _Alloc = std::allocator<std::pair<double, int> >]' at /usr/include/c++/14/bits/stl_vector.h:1301:21,
    inlined from 'int trimComplex(std::vector<std::vector<std::vector<double> > >&, std::vector<std::vector<char> >&, std::vector<std::vector<char> >&, std::vector<int>&, const std::vector<std::vector<std::vector<double> > >&, const std::vector<std::vector<char> >&, const std::vector<std::vector<char> >&, const std::vector<int>&, const std::vector<int>&, int, int)' at /build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h:2955:33:
/usr/include/c++/14/bits/new_allocator.h:191:11: warning: 'dinter' may be used uninitialized [-Wmaybe-uninitialized]
  191 |         { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); }
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h: In function 'int trimComplex(std::vector<std::vector<std::vector<double> > >&, std::vector<std::vector<char> >&, std::vector<std::vector<char> >&, std::vector<int>&, const std::vector<std::vector<std::vector<double> > >&, const std::vector<std::vector<char> >&, const std::vector<std::vector<char> >&, const std::vector<int>&, const std::vector<int>&, int, int)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/USalign/MMalign.h:2908:12: note: 'dinter' was declared here
 2908 |     double dinter;
      |            ^~~~~~
[ 30%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_map.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/export_map.cc.o -MF CMakeFiles/_ost_img.dir/export_map.cc.o.d -o CMakeFiles/_ost_img.dir/export_map.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/pymod/export_map.cc
[ 31%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_property_id.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_property_id.cc.o -MF CMakeFiles/_ost_mol.dir/export_property_id.cc.o.d -o CMakeFiles/_ost_mol.dir/export_property_id.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/export_property_id.cc
[ 31%] Building CXX object modules/img/base/pymod/CMakeFiles/_ost_img.dir/wrap_img.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/base/pymod/CMakeFiles/_ost_img.dir/wrap_img.cc.o -MF CMakeFiles/_ost_img.dir/wrap_img.cc.o.d -o CMakeFiles/_ost_img.dir/wrap_img.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/pymod/wrap_img.cc
make  -f modules/gfx/src/CMakeFiles/ost_gfx.dir/build.make modules/gfx/src/CMakeFiles/ost_gfx.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/gfx/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src/CMakeFiles/ost_gfx.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/gfx/src/CMakeFiles/ost_gfx.dir/build.make modules/gfx/src/CMakeFiles/ost_gfx.dir/build
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 31%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/bitmap_io.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/bitmap_io.cc.o -MF CMakeFiles/ost_gfx.dir/bitmap_io.cc.o.d -o CMakeFiles/ost_gfx.dir/bitmap_io.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/bitmap_io.cc
[ 31%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/clash_score.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/clash_score.cc.o -MF CMakeFiles/ost_mol_alg.dir/clash_score.cc.o.d -o CMakeFiles/ost_mol_alg.dir/clash_score.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/clash_score.cc
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/wrap_tmalign.cc: In function 'ost::bindings::MMAlignResult ost::bindings::WrappedMMAlign(const std::vector<geom::Vec3List>&, const std::vector<geom::Vec3List>&, const ost::seq::SequenceList&, const ost::seq::SequenceList&, const std::vector<bool>&, const std::vector<bool>&, bool, const std::map<int, int>&)':
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/wrap_tmalign.cc:904:36: warning: 'seqx' may be used uninitialized [-Wmaybe-uninitialized]
  904 |     if (byresi_opt==0) MMalign_iter(max_total_score, max_iter, xa_vec, ya_vec,
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  905 |         seqx_vec, seqy_vec, secx_vec, secy_vec, mol_vec1, mol_vec2, xlen_vec,
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  906 |         ylen_vec, xa, ya, seqx, seqy, secx, secy, len_aa, len_na, chain1_num,
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  907 |         chain2_num, TMave_mat, seqxA_mat, seqyA_mat, assign1_list, assign2_list,
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  908 |         sequence, d0_scale, fast_opt, chainmap);
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/wrap_tmalign.cc:551:11: note: 'seqx' was declared here
  551 |   char   *seqx, *seqy;           // for the protein sequence
      |           ^~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/wrap_tmalign.cc:904:36: warning: 'seqy' may be used uninitialized [-Wmaybe-uninitialized]
  904 |     if (byresi_opt==0) MMalign_iter(max_total_score, max_iter, xa_vec, ya_vec,
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  905 |         seqx_vec, seqy_vec, secx_vec, secy_vec, mol_vec1, mol_vec2, xlen_vec,
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  906 |         ylen_vec, xa, ya, seqx, seqy, secx, secy, len_aa, len_na, chain1_num,
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  907 |         chain2_num, TMave_mat, seqxA_mat, seqyA_mat, assign1_list, assign2_list,
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  908 |         sequence, d0_scale, fast_opt, chainmap);
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/wrap_tmalign.cc:551:18: note: 'seqy' was declared here
  551 |   char   *seqx, *seqy;           // for the protein sequence
      |                  ^~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/wrap_tmalign.cc:904:36: warning: 'secx' may be used uninitialized [-Wmaybe-uninitialized]
  904 |     if (byresi_opt==0) MMalign_iter(max_total_score, max_iter, xa_vec, ya_vec,
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  905 |         seqx_vec, seqy_vec, secx_vec, secy_vec, mol_vec1, mol_vec2, xlen_vec,
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  906 |         ylen_vec, xa, ya, seqx, seqy, secx, secy, len_aa, len_na, chain1_num,
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  907 |         chain2_num, TMave_mat, seqxA_mat, seqyA_mat, assign1_list, assign2_list,
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  908 |         sequence, d0_scale, fast_opt, chainmap);
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/wrap_tmalign.cc:552:11: note: 'secx' was declared here
  552 |   char   *secx, *secy;           // for the secondary structure
      |           ^~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/wrap_tmalign.cc:904:36: warning: 'secy' may be used uninitialized [-Wmaybe-uninitialized]
  904 |     if (byresi_opt==0) MMalign_iter(max_total_score, max_iter, xa_vec, ya_vec,
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  905 |         seqx_vec, seqy_vec, secx_vec, secy_vec, mol_vec1, mol_vec2, xlen_vec,
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  906 |         ylen_vec, xa, ya, seqx, seqy, secx, secy, len_aa, len_na, chain1_num,
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  907 |         chain2_num, TMave_mat, seqxA_mat, seqyA_mat, assign1_list, assign2_list,
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  908 |         sequence, d0_scale, fast_opt, chainmap);
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/bindings/src/wrap_tmalign.cc:552:18: note: 'secy' was declared here
  552 |   char   *secx, *secy;           // for the secondary structure
      |                  ^~~~
[ 31%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/sec_structure_segments.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/sec_structure_segments.cc.o -MF CMakeFiles/ost_mol_alg.dir/sec_structure_segments.cc.o.d -o CMakeFiles/ost_mol_alg.dir/sec_structure_segments.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/sec_structure_segments.cc
[ 31%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/exporter.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/exporter.cc.o -MF CMakeFiles/ost_gfx.dir/exporter.cc.o.d -o CMakeFiles/ost_gfx.dir/exporter.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/exporter.cc
[ 31%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_query.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_query.cc.o -MF CMakeFiles/_ost_mol.dir/export_query.cc.o.d -o CMakeFiles/_ost_mol.dir/export_query.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/export_query.cc
[ 31%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/local_dist_diff_test.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/local_dist_diff_test.cc.o -MF CMakeFiles/ost_mol_alg.dir/local_dist_diff_test.cc.o.d -o CMakeFiles/ost_mol_alg.dir/local_dist_diff_test.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/local_dist_diff_test.cc
[ 31%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/distance_test_common.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/distance_test_common.cc.o -MF CMakeFiles/ost_mol_alg.dir/distance_test_common.cc.o.d -o CMakeFiles/ost_mol_alg.dir/distance_test_common.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/distance_test_common.cc
[ 31%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/distance_rmsd_test.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/distance_rmsd_test.cc.o -MF CMakeFiles/ost_mol_alg.dir/distance_rmsd_test.cc.o.d -o CMakeFiles/ost_mol_alg.dir/distance_rmsd_test.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/distance_rmsd_test.cc
[ 32%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/superpose_frames.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/superpose_frames.cc.o -MF CMakeFiles/ost_mol_alg.dir/superpose_frames.cc.o.d -o CMakeFiles/ost_mol_alg.dir/superpose_frames.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/superpose_frames.cc
[ 32%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_residue.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_residue.cc.o -MF CMakeFiles/_ost_mol.dir/export_residue.cc.o.d -o CMakeFiles/_ost_mol.dir/export_residue.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/export_residue.cc
[ 32%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/filter_clashes.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/filter_clashes.cc.o -MF CMakeFiles/ost_mol_alg.dir/filter_clashes.cc.o.d -o CMakeFiles/ost_mol_alg.dir/filter_clashes.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/filter_clashes.cc
[ 32%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_residue_view.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_residue_view.cc.o -MF CMakeFiles/_ost_mol.dir/export_residue_view.cc.o.d -o CMakeFiles/_ost_mol.dir/export_residue_view.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/export_residue_view.cc
[ 32%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/collada_exporter.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/collada_exporter.cc.o -MF CMakeFiles/ost_gfx.dir/collada_exporter.cc.o.d -o CMakeFiles/ost_gfx.dir/collada_exporter.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/collada_exporter.cc
[ 32%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/construct_cbeta.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/construct_cbeta.cc.o -MF CMakeFiles/ost_mol_alg.dir/construct_cbeta.cc.o.d -o CMakeFiles/ost_mol_alg.dir/construct_cbeta.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/construct_cbeta.cc
[ 32%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_surface.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_surface.cc.o -MF CMakeFiles/_ost_mol.dir/export_surface.cc.o.d -o CMakeFiles/_ost_mol.dir/export_surface.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/export_surface.cc
[ 32%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_bounding_box.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_bounding_box.cc.o -MF CMakeFiles/_ost_mol.dir/export_bounding_box.cc.o.d -o CMakeFiles/_ost_mol.dir/export_bounding_box.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/export_bounding_box.cc
[ 32%] Linking CXX shared library ../../../stage/lib/libost_bindings.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_bindings.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/ost_bindings.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_bindings.so.2.9 -o ../../../stage/lib/libost_bindings.so.2.9.0 CMakeFiles/ost_bindings.dir/wrap_tmalign.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_seq.so.2.9.0 ../../../stage/lib/libost_mol.so.2.9.0 ../../../stage/lib/libost_info.so.2.9.0 ../../../stage/lib/libost_base.so.2.9.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/src && /usr/bin/cmake -E cmake_symlink_library ../../../stage/lib/libost_bindings.so.2.9.0 ../../../stage/lib/libost_bindings.so.2.9 ../../../stage/lib/libost_bindings.so
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 32%] Built target ost_bindings
[ 32%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_query_view_wrapper.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_query_view_wrapper.cc.o -MF CMakeFiles/_ost_mol.dir/export_query_view_wrapper.cc.o.d -o CMakeFiles/_ost_mol.dir/export_query_view_wrapper.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/export_query_view_wrapper.cc
[ 32%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/trajectory_analysis.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/trajectory_analysis.cc.o -MF CMakeFiles/ost_mol_alg.dir/trajectory_analysis.cc.o.d -o CMakeFiles/ost_mol_alg.dir/trajectory_analysis.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/trajectory_analysis.cc
In file included from /usr/include/c++/14/string:54,
                 from /usr/include/c++/14/bits/locale_classes.h:40,
                 from /usr/include/c++/14/bits/ios_base.h:41,
                 from /usr/include/c++/14/ios:44,
                 from /usr/include/c++/14/ostream:40,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/log.hh:22,
                 from /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/distance_rmsd_test.cc:1:
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:904:15,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38:
/usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized]
 1084 |       { return _M_string_length; }
      |                ^~~~~~~~~~~~~~~~
In file included from /usr/include/boost/variant.hpp:17,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/query.hh:30,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_handle.hh:26,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mol.hh:22,
                 from /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/distance_rmsd_test.cc:2:
/usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In file included from /usr/include/c++/14/ios:42:
In static member function 'static constexpr void std::char_traits<char>::assign(char_type&, const char_type&)',
    inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:433:23,
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:882:18,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38:
/usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits<char>::char_type*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized]
  350 |         __c1 = __c2;
      |                ^~~~
/usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
[ 32%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/structure_analysis.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/structure_analysis.cc.o -MF CMakeFiles/ost_mol_alg.dir/structure_analysis.cc.o.d -o CMakeFiles/ost_mol_alg.dir/structure_analysis.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/structure_analysis.cc
[ 32%] Linking CXX shared module ../../../../stage/lib/python3.12/dist-packages/ost/img/_ost_img.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_img.dir/link.txt --verbose=1
[ 32%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_torsion.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_torsion.cc.o -MF CMakeFiles/_ost_mol.dir/export_torsion.cc.o.d -o CMakeFiles/_ost_mol.dir/export_torsion.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/export_torsion.cc
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/_ost_img.dir/link.d -Wl,-z,relro -shared  -o ../../../../stage/lib/python3.12/dist-packages/ost/img/_ost_img.so CMakeFiles/_ost_img.dir/export_data.cc.o CMakeFiles/_ost_img.dir/export_data_algorithm.cc.o CMakeFiles/_ost_img.dir/export_extent.cc.o CMakeFiles/_ost_img.dir/export_image_handle.cc.o CMakeFiles/_ost_img.dir/export_peak.cc.o CMakeFiles/_ost_img.dir/export_phase.cc.o CMakeFiles/_ost_img.dir/export_point.cc.o CMakeFiles/_ost_img.dir/export_progress.cc.o CMakeFiles/_ost_img.dir/export_raster_image.cc.o CMakeFiles/_ost_img.dir/export_size.cc.o CMakeFiles/_ost_img.dir/export_mask.cc.o CMakeFiles/_ost_img.dir/export_image_list.cc.o CMakeFiles/_ost_img.dir/export_map.cc.o CMakeFiles/_ost_img.dir/wrap_img.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_img.so.2.9.0 /usr/lib/x86_64-linux-gnu/libpython3.12.so /usr/lib/x86_64-linux-gnu/libboost_python312.so.1.83.0 ../../../../stage/lib/libost_info.so.2.9.0 ../../../../stage/lib/libost_base.so.2.9.0 ../../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/img/base/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/img/./__init__.pyc\",\"__init__.py\",doraise=True)"
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/img/alg/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 32%] Building CXX object modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/wrap_alg.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/wrap_alg.cc.o -MF CMakeFiles/_ost_img_alg.dir/wrap_alg.cc.o.d -o CMakeFiles/_ost_img_alg.dir/wrap_alg.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/pymod/wrap_alg.cc
[ 32%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/color.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/color.cc.o -MF CMakeFiles/ost_gfx.dir/color.cc.o.d -o CMakeFiles/ost_gfx.dir/color.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color.cc
[ 32%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/consistency_checks.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/consistency_checks.cc.o -MF CMakeFiles/ost_mol_alg.dir/consistency_checks.cc.o.d -o CMakeFiles/ost_mol_alg.dir/consistency_checks.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/consistency_checks.cc
[ 32%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_visitor.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_visitor.cc.o -MF CMakeFiles/_ost_mol.dir/export_visitor.cc.o.d -o CMakeFiles/_ost_mol.dir/export_visitor.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/export_visitor.cc
[ 32%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/pdbize.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/pdbize.cc.o -MF CMakeFiles/ost_mol_alg.dir/pdbize.cc.o.d -o CMakeFiles/ost_mol_alg.dir/pdbize.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/pdbize.cc
[ 32%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/primitives.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/primitives.cc.o -MF CMakeFiles/ost_gfx.dir/primitives.cc.o.d -o CMakeFiles/ost_gfx.dir/primitives.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/primitives.cc
In file included from /usr/include/c++/14/string:54,
                 from /usr/include/c++/14/bits/locale_classes.h:40,
                 from /usr/include/c++/14/bits/ios_base.h:41,
                 from /usr/include/c++/14/ios:44,
                 from /usr/include/c++/14/ostream:40,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/log.hh:22,
                 from /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/filter_clashes.cc:19:
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:904:15,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetBoolProp(const String&, bool) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:372:38:
/usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized]
 1084 |       { return _M_string_length; }
      |                ^~~~~~~~~~~~~~~~
In file included from /usr/include/boost/variant.hpp:17,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/query.hh:30,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_handle.hh:26,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mol.hh:22,
                 from /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/filter_clashes.cc:20:
/usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer<H>::SetBoolProp(const String&, bool) [with H = ost::mol::ResidueBase]':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In file included from /usr/include/c++/14/ios:42:
In static member function 'static constexpr void std::char_traits<char>::assign(char_type&, const char_type&)',
    inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:433:23,
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:882:18,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetBoolProp(const String&, bool) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:372:38:
/usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits<char>::char_type*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized]
  350 |         __c1 = __c2;
      |                ^~~~
/usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer<H>::SetBoolProp(const String&, bool) [with H = ost::mol::ResidueBase]':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetBoolProp(const String&, bool) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:372:38:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer<H>::SetBoolProp(const String&, bool) [with H = ost::mol::ResidueBase]':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = bool; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetBoolProp(const String&, bool) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:372:38:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer<H>::SetBoolProp(const String&, bool) [with H = ost::mol::ResidueBase]':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
[ 32%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/wrap_mol.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/wrap_mol.cc.o -MF CMakeFiles/_ost_mol.dir/wrap_mol.cc.o.d -o CMakeFiles/_ost_mol.dir/wrap_mol.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/wrap_mol.cc
[ 32%] Building CXX object modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_entity_property_mapper.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/export_entity_property_mapper.cc.o -MF CMakeFiles/_ost_mol.dir/export_entity_property_mapper.cc.o.d -o CMakeFiles/_ost_mol.dir/export_entity_property_mapper.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/export_entity_property_mapper.cc
[ 32%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/entity.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/entity.cc.o -MF CMakeFiles/ost_gfx.dir/entity.cc.o.d -o CMakeFiles/ost_gfx.dir/entity.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/entity.cc
[ 32%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/adjacency_bitmap.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/adjacency_bitmap.cc.o -MF CMakeFiles/ost_mol_alg.dir/adjacency_bitmap.cc.o.d -o CMakeFiles/ost_mol_alg.dir/adjacency_bitmap.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/adjacency_bitmap.cc
[ 32%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/contact_overlap.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/contact_overlap.cc.o -MF CMakeFiles/ost_mol_alg.dir/contact_overlap.cc.o.d -o CMakeFiles/ost_mol_alg.dir/contact_overlap.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/contact_overlap.cc
[ 32%] Building CXX object modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/export_filter.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/export_filter.cc.o -MF CMakeFiles/_ost_img_alg.dir/export_filter.cc.o.d -o CMakeFiles/_ost_img_alg.dir/export_filter.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/pymod/export_filter.cc
[ 32%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/symmetry_node.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/symmetry_node.cc.o -MF CMakeFiles/ost_gfx.dir/symmetry_node.cc.o.d -o CMakeFiles/ost_gfx.dir/symmetry_node.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/symmetry_node.cc
[ 32%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/domain_find.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/domain_find.cc.o -MF CMakeFiles/ost_mol_alg.dir/domain_find.cc.o.d -o CMakeFiles/ost_mol_alg.dir/domain_find.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/domain_find.cc
[ 32%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/similarity_matrix.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/similarity_matrix.cc.o -MF CMakeFiles/ost_mol_alg.dir/similarity_matrix.cc.o.d -o CMakeFiles/ost_mol_alg.dir/similarity_matrix.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/similarity_matrix.cc
[ 32%] Building CXX object modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/export_normalizer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/export_normalizer.cc.o -MF CMakeFiles/_ost_img_alg.dir/export_normalizer.cc.o.d -o CMakeFiles/_ost_img_alg.dir/export_normalizer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/pymod/export_normalizer.cc
[ 33%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/accessibility.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/accessibility.cc.o -MF CMakeFiles/ost_mol_alg.dir/accessibility.cc.o.d -o CMakeFiles/ost_mol_alg.dir/accessibility.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/trace_renderer_base.hh:27,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/cartoon_renderer.hh:31,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/entity.cc:39:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=]
   62 |   virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st);
      |                ^~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/entity.cc:52:
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/entity.hh:294:8: note:   by 'ost::gfx::Entity::Apply'
  294 |   void Apply(const gfx::MapHandleColorOp& op, bool store=true);
      |        ^~~~~
[ 35%] Building CXX object modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/export_transcendentals.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/export_transcendentals.cc.o -MF CMakeFiles/_ost_img_alg.dir/export_transcendentals.cc.o.d -o CMakeFiles/_ost_img_alg.dir/export_transcendentals.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/pymod/export_transcendentals.cc
[ 35%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/sec_struct.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/sec_struct.cc.o -MF CMakeFiles/ost_mol_alg.dir/sec_struct.cc.o.d -o CMakeFiles/ost_mol_alg.dir/sec_struct.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/sec_struct.cc
[ 36%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/gfx_node.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/gfx_node.cc.o -MF CMakeFiles/ost_gfx.dir/gfx_node.cc.o.d -o CMakeFiles/ost_gfx.dir/gfx_node.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/gfx_node.cc
In file included from /usr/include/c++/14/string:54,
                 from /usr/include/c++/14/bits/locale_classes.h:40,
                 from /usr/include/c++/14/bits/ios_base.h:41,
                 from /usr/include/c++/14/ios:44,
                 from /usr/include/c++/14/ostream:40,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/log.hh:22,
                 from /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/contact_overlap.cc:1:
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:904:15,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void ost::mol::alg::CalcContactNodeDegree(const ContactList&)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/contact_overlap.cc:66:20:
/usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized]
 1084 |       { return _M_string_length; }
      |                ^~~~~~~~~~~~~~~~
In file included from /usr/include/boost/variant.hpp:17,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/query.hh:30,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_handle.hh:26,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mol.hh:22,
                 from /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/contact_overlap.cc:2:
/usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::CalcContactNodeDegree(const ContactList&)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In file included from /usr/include/c++/14/ios:42:
In static member function 'static constexpr void std::char_traits<char>::assign(char_type&, const char_type&)',
    inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:433:23,
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:882:18,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void ost::mol::alg::CalcContactNodeDegree(const ContactList&)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/contact_overlap.cc:66:20:
/usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits<char>::char_type*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized]
  350 |         __c1 = __c2;
      |                ^~~~
/usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::CalcContactNodeDegree(const ContactList&)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void ost::mol::alg::CalcContactNodeDegree(const ContactList&)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/contact_overlap.cc:66:20:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::CalcContactNodeDegree(const ContactList&)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void ost::mol::alg::CalcContactNodeDegree(const ContactList&)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/contact_overlap.cc:66:20:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::CalcContactNodeDegree(const ContactList&)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
[ 36%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/nonstandard.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/nonstandard.cc.o -MF CMakeFiles/ost_mol_alg.dir/nonstandard.cc.o.d -o CMakeFiles/ost_mol_alg.dir/nonstandard.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/nonstandard.cc
[ 36%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/molck.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/molck.cc.o -MF CMakeFiles/ost_mol_alg.dir/molck.cc.o.d -o CMakeFiles/ost_mol_alg.dir/molck.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/molck.cc
[ 36%] Building CXX object modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/export_polar.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_img_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/export_polar.cc.o -MF CMakeFiles/_ost_img_alg.dir/export_polar.cc.o.d -o CMakeFiles/_ost_img_alg.dir/export_polar.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/pymod/export_polar.cc
[ 36%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/find_membrane.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/find_membrane.cc.o -MF CMakeFiles/ost_mol_alg.dir/find_membrane.cc.o.d -o CMakeFiles/ost_mol_alg.dir/find_membrane.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/find_membrane.cc
[ 36%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/entity_to_density.cc.o
[ 36%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/gfx_object.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/entity_to_density.cc.o -MF CMakeFiles/ost_mol_alg.dir/entity_to_density.cc.o.d -o CMakeFiles/ost_mol_alg.dir/entity_to_density.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/entity_to_density.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/gfx_object.cc.o -MF CMakeFiles/ost_gfx.dir/gfx_object.cc.o.d -o CMakeFiles/ost_gfx.dir/gfx_object.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/gfx_object.cc
[ 36%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/biounit.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/biounit.cc.o -MF CMakeFiles/ost_mol_alg.dir/biounit.cc.o.d -o CMakeFiles/ost_mol_alg.dir/biounit.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/biounit.cc
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:904:15,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/contact_overlap.cc:445:21:
/usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized]
 1084 |       { return _M_string_length; }
      |                ^~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In static member function 'static constexpr void std::char_traits<char>::assign(char_type&, const char_type&)',
    inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:433:23,
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:882:18,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/contact_overlap.cc:445:21:
/usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits<char>::char_type*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized]
  350 |         __c1 = __c2;
      |                ^~~~
/usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/contact_overlap.cc:445:21:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/contact_overlap.cc:445:21:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:904:15,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/contact_overlap.cc:448:21:
/usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized]
 1084 |       { return _M_string_length; }
      |                ^~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In static member function 'static constexpr void std::char_traits<char>::assign(char_type&, const char_type&)',
    inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:433:23,
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:882:18,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/contact_overlap.cc:448:21:
/usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits<char>::char_type*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized]
  350 |         __c1 = __c2;
      |                ^~~~
/usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/contact_overlap.cc:448:21:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/contact_overlap.cc:448:21:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:904:15,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/contact_overlap.cc:453:23:
/usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized]
 1084 |       { return _M_string_length; }
      |                ^~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In static member function 'static constexpr void std::char_traits<char>::assign(char_type&, const char_type&)',
    inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:433:23,
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:882:18,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/contact_overlap.cc:453:23:
/usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits<char>::char_type*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized]
  350 |         __c1 = __c2;
      |                ^~~~
/usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/contact_overlap.cc:453:23:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/contact_overlap.cc:453:23:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'void ost::mol::alg::DomainsFromCOM(const SimilarityMatrix&, ost::seq::AlignmentHandle, Real, int, int)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
[ 36%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/gfx_prim.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/gfx_prim.cc.o -MF CMakeFiles/ost_gfx.dir/gfx_prim.cc.o.d -o CMakeFiles/ost_gfx.dir/gfx_prim.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/gfx_prim.cc
[ 36%] Building CXX object modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/gdt.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_ALG -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/gdt.cc.o -MF CMakeFiles/ost_mol_alg.dir/gdt.cc.o.d -o CMakeFiles/ost_mol_alg.dir/gdt.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/gdt.cc
[ 36%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/gfx_test_object.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/gfx_test_object.cc.o -MF CMakeFiles/ost_gfx.dir/gfx_test_object.cc.o.d -o CMakeFiles/ost_gfx.dir/gfx_test_object.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/gfx_test_object.cc
[ 36%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/input.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/input.cc.o -MF CMakeFiles/ost_gfx.dir/input.cc.o.d -o CMakeFiles/ost_gfx.dir/input.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/input.cc
[ 36%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/prim_list.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/prim_list.cc.o -MF CMakeFiles/ost_gfx.dir/prim_list.cc.o.d -o CMakeFiles/ost_gfx.dir/prim_list.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/prim_list.cc
[ 36%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/scene.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/scene.cc.o -MF CMakeFiles/ost_gfx.dir/scene.cc.o.d -o CMakeFiles/ost_gfx.dir/scene.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/scene.cc
[ 36%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/selection.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/selection.cc.o -MF CMakeFiles/ost_gfx.dir/selection.cc.o.d -o CMakeFiles/ost_gfx.dir/selection.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/selection.cc
[ 36%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/surface.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/surface.cc.o -MF CMakeFiles/ost_gfx.dir/surface.cc.o.d -o CMakeFiles/ost_gfx.dir/surface.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/surface.cc
[ 36%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/gradient.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/gradient.cc.o -MF CMakeFiles/ost_gfx.dir/gradient.cc.o.d -o CMakeFiles/ost_gfx.dir/gradient.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/gradient.cc
In file included from /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/domain_find.cc:11:
In member function 'void ost::mol::alg::AdjacencyBitmap::set(size_t, size_t, bool, bool)',
    inlined from 'ost::mol::alg::AdjacencyBitmap::AdjacencyBitmap(const ost::mol::alg::DistanceMatrix&, const ost::mol::alg::DistanceMatrix&, Real, Real, int, int)' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/adjacency_bitmap.hh:49:16,
    inlined from 'static ost::mol::alg::DomainsPtr ost::mol::alg::Domains::FromDistMats(const ost::mol::alg::DistanceMatrix&, const ost::mol::alg::DistanceMatrix&, Real, Real, Real, int, bool, bool)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/domain_find.cc:363:37:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/adjacency_bitmap.hh:109:23: warning: '*(uint64_t*)<unknown>' may be used uninitialized [-Wmaybe-uninitialized]
  109 |       data_[byte_index] &= ~(one << bit_index);
      |       ~~~~~~~~~~~~~~~~^
[ 36%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/gradient_manager.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/gradient_manager.cc.o -MF CMakeFiles/ost_gfx.dir/gradient_manager.cc.o.d -o CMakeFiles/ost_gfx.dir/gradient_manager.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/gradient_manager.cc
In file included from /usr/include/c++/14/string:54,
                 from /usr/include/c++/14/bits/locale_classes.h:40,
                 from /usr/include/c++/14/bits/ios_base.h:41,
                 from /usr/include/c++/14/ios:44,
                 from /usr/include/c++/14/istream:40,
                 from /usr/include/c++/14/sstream:40,
                 from /usr/include/c++/14/complex:45,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/base.hh:24,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/module_config.hh:22,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_view.hh:24,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/accessibility.hh:23,
                 from /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc:1:
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:904:15,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38:
/usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized]
 1084 |       { return _M_string_length; }
      |                ^~~~~~~~~~~~~~~~
In file included from /usr/include/boost/variant.hpp:17,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:34,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_base.hh:25,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_view.hh:27:
/usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In file included from /usr/include/c++/14/ios:42:
In static member function 'static constexpr void std::char_traits<char>::assign(char_type&, const char_type&)',
    inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:433:23,
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:882:18,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38:
/usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits<char>::char_type*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized]
  350 |         __c1 = __c2;
      |                ^~~~
/usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In member function 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
[ 37%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/vertex_array.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/vertex_array.cc.o -MF CMakeFiles/ost_gfx.dir/vertex_array.cc.o.d -o CMakeFiles/ost_gfx.dir/vertex_array.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/vertex_array.cc
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:904:15,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc:778:21:
/usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized]
 1084 |       { return _M_string_length; }
      |                ^~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In static member function 'static constexpr void std::char_traits<char>::assign(char_type&, const char_type&)',
    inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:433:23,
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:882:18,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc:778:21:
/usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits<char>::char_type*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized]
  350 |         __c1 = __c2;
      |                ^~~~
/usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc:778:21:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc:778:21:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:904:15,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc:785:32:
/usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized]
 1084 |       { return _M_string_length; }
      |                ^~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In static member function 'static constexpr void std::char_traits<char>::assign(char_type&, const char_type&)',
    inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:433:23,
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:882:18,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc:785:32:
/usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits<char>::char_type*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized]
  350 |         __c1 = __c2;
      |                ^~~~
/usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc:785:32:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc:785:32:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:904:15,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc:788:21:
/usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized]
 1084 |       { return _M_string_length; }
      |                ^~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In static member function 'static constexpr void std::char_traits<char>::assign(char_type&, const char_type&)',
    inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:433:23,
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:882:18,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc:788:21:
/usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits<char>::char_type*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized]
  350 |         __c1 = __c2;
      |                ^~~~
/usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc:788:21:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc:788:21:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:904:15,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc:803:35:
/usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized]
 1084 |       { return _M_string_length; }
      |                ^~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In static member function 'static constexpr void std::char_traits<char>::assign(char_type&, const char_type&)',
    inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:433:23,
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:882:18,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc:803:35:
/usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits<char>::char_type*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized]
  350 |         __c1 = __c2;
      |                ^~~~
/usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc:803:35:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc:803:35:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:904:15,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc:808:35:
/usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized]
 1084 |       { return _M_string_length; }
      |                ^~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In static member function 'static constexpr void std::char_traits<char>::assign(char_type&, const char_type&)',
    inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:433:23,
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:882:18,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc:808:35:
/usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits<char>::char_type*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized]
  350 |         __c1 = __c2;
      |                ^~~~
/usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc:808:35:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/accessibility.cc:808:35:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'Real {anonymous}::SetAccessibilityProps(ost::mol::EntityView&, ost::mol::AtomViewList&, const std::vector<float>&, const String&, const String&, const String&, ost::mol::alg::AccessibilityAlgorithm)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In file included from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/gfx_object_base.hh:34,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/gfx_object.hh:40,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/surface.hh:32,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/surface.cc:28:
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=]
   55 |   virtual void DeepSwap(GfxNode& n);
      |                ^~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/gfx_object.hh:58:16: note:   by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)'
   58 |   virtual void DeepSwap(GfxObj& go);
      |                ^~~~~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/gfx_test_object.hh:28,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/gfx_test_object.cc:31:
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/gfx_object.hh:124:31: warning: 'virtual geom::AlignedCuboid ost::gfx::GfxObj::GetBoundingBox(bool) const' was hidden [-Woverloaded-virtual=]
  124 |   virtual geom::AlignedCuboid GetBoundingBox(bool use_tf=false) const;
      |                               ^~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/gfx_test_object.hh:40:31: note:   by 'virtual geom::AlignedCuboid ost::gfx::GfxTestObj::GetBoundingBox() const'
   40 |   virtual geom::AlignedCuboid GetBoundingBox() const;
      |                               ^~~~~~~~~~~~~~
[ 37%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/vertex_array_helper.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/vertex_array_helper.cc.o -MF CMakeFiles/ost_gfx.dir/vertex_array_helper.cc.o.d -o CMakeFiles/ost_gfx.dir/vertex_array_helper.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/vertex_array_helper.cc
[ 37%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/material.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/material.cc.o -MF CMakeFiles/ost_gfx.dir/material.cc.o.d -o CMakeFiles/ost_gfx.dir/material.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/material.cc
[ 37%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/povray.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/povray.cc.o -MF CMakeFiles/ost_gfx.dir/povray.cc.o.d -o CMakeFiles/ost_gfx.dir/povray.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/povray.cc
[ 37%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/gost_exporter.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/gost_exporter.cc.o -MF CMakeFiles/ost_gfx.dir/gost_exporter.cc.o.d -o CMakeFiles/ost_gfx.dir/gost_exporter.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/gost_exporter.cc
[ 37%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/texture.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/texture.cc.o -MF CMakeFiles/ost_gfx.dir/texture.cc.o.d -o CMakeFiles/ost_gfx.dir/texture.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/texture.cc
[ 37%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/color_op.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/color_op.cc.o -MF CMakeFiles/ost_gfx.dir/color_ops/color_op.cc.o.d -o CMakeFiles/ost_gfx.dir/color_ops/color_op.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/color_op.cc
[ 37%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/by_element_color_op.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/by_element_color_op.cc.o -MF CMakeFiles/ost_gfx.dir/color_ops/by_element_color_op.cc.o.d -o CMakeFiles/ost_gfx.dir/color_ops/by_element_color_op.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/by_element_color_op.cc
In file included from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/scene.cc:49:
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/gfx_object.hh:124:31: warning: 'virtual geom::AlignedCuboid ost::gfx::GfxObj::GetBoundingBox(bool) const' was hidden [-Woverloaded-virtual=]
  124 |   virtual geom::AlignedCuboid GetBoundingBox(bool use_tf=false) const;
      |                               ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/scene.cc:50:
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/gfx_test_object.hh:40:31: note:   by 'virtual geom::AlignedCuboid ost::gfx::GfxTestObj::GetBoundingBox() const'
   40 |   virtual geom::AlignedCuboid GetBoundingBox() const;
      |                               ^~~~~~~~~~~~~~
[ 37%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/by_chain_color_op.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/by_chain_color_op.cc.o -MF CMakeFiles/ost_gfx.dir/color_ops/by_chain_color_op.cc.o.d -o CMakeFiles/ost_gfx.dir/color_ops/by_chain_color_op.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/by_chain_color_op.cc
[ 37%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/uniform_color_op.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/uniform_color_op.cc.o -MF CMakeFiles/ost_gfx.dir/color_ops/uniform_color_op.cc.o.d -o CMakeFiles/ost_gfx.dir/color_ops/uniform_color_op.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/uniform_color_op.cc
[ 37%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/gradient_color_op.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/gradient_color_op.cc.o -MF CMakeFiles/ost_gfx.dir/color_ops/gradient_color_op.cc.o.d -o CMakeFiles/ost_gfx.dir/color_ops/gradient_color_op.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/gradient_color_op.cc
[ 37%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/entity_view_color_op.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/entity_view_color_op.cc.o -MF CMakeFiles/ost_gfx.dir/color_ops/entity_view_color_op.cc.o.d -o CMakeFiles/ost_gfx.dir/color_ops/entity_view_color_op.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/entity_view_color_op.cc
[ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/basic_gradient_color_op.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/basic_gradient_color_op.cc.o -MF CMakeFiles/ost_gfx.dir/color_ops/basic_gradient_color_op.cc.o.d -o CMakeFiles/ost_gfx.dir/color_ops/basic_gradient_color_op.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/basic_gradient_color_op.cc
[ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/gradient_level_color_op.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/gradient_level_color_op.cc.o -MF CMakeFiles/ost_gfx.dir/color_ops/gradient_level_color_op.cc.o.d -o CMakeFiles/ost_gfx.dir/color_ops/gradient_level_color_op.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/gradient_level_color_op.cc
[ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/entity_renderer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/entity_renderer.cc.o -MF CMakeFiles/ost_gfx.dir/impl/entity_renderer.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/entity_renderer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/entity_renderer.cc
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/vertex_array.cc:1311:8: warning: 'geom::Vec3 ost::gfx::{anonymous}::make_aaline_edge(const geom::Vec2&, const geom::Vec2&, float)' defined but not used [-Wunused-function]
 1311 |   Vec3 make_aaline_edge(const Vec2& c1, const Vec2& c0, float s)
      |        ^~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/vertex_array.cc:1239:8: warning: 'void ost::gfx::{anonymous}::render_aalines(AALineList&, float, float)' defined but not used [-Wunused-function]
 1239 |   void render_aalines(AALineList& line_list, float w, float r)
      |        ^~~~~~~~~~~~~~
[ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/entity_detail.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/entity_detail.cc.o -MF CMakeFiles/ost_gfx.dir/impl/entity_detail.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/entity_detail.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/entity_detail.cc
[ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/cartoon_renderer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/cartoon_renderer.cc.o -MF CMakeFiles/ost_gfx.dir/impl/cartoon_renderer.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/cartoon_renderer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/cartoon_renderer.cc
[ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/custom_renderer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/custom_renderer.cc.o -MF CMakeFiles/ost_gfx.dir/impl/custom_renderer.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/custom_renderer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/custom_renderer.cc
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/by_chain_color_op.cc:23:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=]
   62 |   virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st);
      |                ^~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:294:8: note:   by 'ost::gfx::Entity::Apply'
  294 |   void Apply(const gfx::MapHandleColorOp& op, bool store=true);
      |        ^~~~~
[ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/cpk_renderer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/cpk_renderer.cc.o -MF CMakeFiles/ost_gfx.dir/impl/cpk_renderer.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/cpk_renderer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/cpk_renderer.cc
[ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/debug_renderer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/debug_renderer.cc.o -MF CMakeFiles/ost_gfx.dir/impl/debug_renderer.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/debug_renderer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/debug_renderer.cc
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/by_element_color_op.cc:22:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=]
   62 |   virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st);
      |                ^~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:294:8: note:   by 'ost::gfx::Entity::Apply'
  294 |   void Apply(const gfx::MapHandleColorOp& op, bool store=true);
      |        ^~~~~
[ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/simple_renderer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/simple_renderer.cc.o -MF CMakeFiles/ost_gfx.dir/impl/simple_renderer.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/simple_renderer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/simple_renderer.cc
[ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/sline_renderer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/sline_renderer.cc.o -MF CMakeFiles/ost_gfx.dir/impl/sline_renderer.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/sline_renderer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/sline_renderer.cc
[ 38%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/line_trace_renderer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/line_trace_renderer.cc.o -MF CMakeFiles/ost_gfx.dir/impl/line_trace_renderer.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/line_trace_renderer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/line_trace_renderer.cc
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/surface.hh:32,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/basic_gradient_color_op.cc:22:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=]
   62 |   virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st);
      |                ^~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/surface.hh:102:8: note:   by 'ost::gfx::Surface::Apply'
  102 |   void Apply(const gfx::MapHandleColorOp& op, bool store=true);
      |        ^~~~~
[ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/backbone_trace.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/backbone_trace.cc.o -MF CMakeFiles/ost_gfx.dir/impl/backbone_trace.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/backbone_trace.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/backbone_trace.cc
[ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/connect_renderer_base.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/connect_renderer_base.cc.o -MF CMakeFiles/ost_gfx.dir/impl/connect_renderer_base.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/connect_renderer_base.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/connect_renderer_base.cc
[ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/trace_renderer_base.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/trace_renderer_base.cc.o -MF CMakeFiles/ost_gfx.dir/impl/trace_renderer_base.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/trace_renderer_base.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/trace_renderer_base.cc
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/custom_renderer.cc: In member function 'void ost::gfx::impl::CustomRenderer::PrepareRendering(ost::gfx::impl::GfxView&, ost::gfx::IndexedVertexArray&, bool)':
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/custom_renderer.cc:67:25: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   67 |       const geom::Vec3& p0=it->bond.GetFirst().GetPos();
      |                         ^~
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/custom_renderer.cc:67:54: note: the temporary was destroyed at the end of the full expression 'ost::mol::BondHandle::GetFirst() const().ost::mol::AtomHandle::ost::mol::AtomBase.ost::mol::AtomBase::GetPos()'
   67 |       const geom::Vec3& p0=it->bond.GetFirst().GetPos();
      |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/custom_renderer.cc:68:25: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   68 |       const geom::Vec3& p2=it->bond.GetSecond().GetPos();
      |                         ^~
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/custom_renderer.cc:68:55: note: the temporary was destroyed at the end of the full expression 'ost::mol::BondHandle::GetSecond() const().ost::mol::AtomHandle::ost::mol::AtomBase.ost::mol::AtomBase::GetPos()'
   68 |       const geom::Vec3& p2=it->bond.GetSecond().GetPos();
      |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/custom_renderer.cc: In member function 'virtual void ost::gfx::impl::CustomRenderer::RenderPov(ost::gfx::PovState&, const std::string&)':
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/custom_renderer.cc:93:23: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   93 |     const geom::Vec3& p0=it->bond.GetFirst().GetPos();
      |                       ^~
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/custom_renderer.cc:93:52: note: the temporary was destroyed at the end of the full expression 'ost::mol::BondHandle::GetFirst() const().ost::mol::AtomHandle::ost::mol::AtomBase.ost::mol::AtomBase::GetPos()'
   93 |     const geom::Vec3& p0=it->bond.GetFirst().GetPos();
      |                          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/custom_renderer.cc:94:23: warning: possibly dangling reference to a temporary [-Wdangling-reference]
   94 |     const geom::Vec3& p2=it->bond.GetSecond().GetPos();
      |                       ^~
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/custom_renderer.cc:94:53: note: the temporary was destroyed at the end of the full expression 'ost::mol::BondHandle::GetSecond() const().ost::mol::AtomHandle::ost::mol::AtomBase.ost::mol::AtomBase::GetPos()'
   94 |     const geom::Vec3& p2=it->bond.GetSecond().GetPos();
      |                          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
[ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/mapped_property.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/mapped_property.cc.o -MF CMakeFiles/ost_gfx.dir/impl/mapped_property.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/mapped_property.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/mapped_property.cc
[ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/tabulated_trig.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/tabulated_trig.cc.o -MF CMakeFiles/ost_gfx.dir/impl/tabulated_trig.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/tabulated_trig.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/tabulated_trig.cc
[ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/trace_renderer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/trace_renderer.cc.o -MF CMakeFiles/ost_gfx.dir/impl/trace_renderer.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/trace_renderer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/trace_renderer.cc
[ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/fast_spheres.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/fast_spheres.cc.o -MF CMakeFiles/ost_gfx.dir/impl/fast_spheres.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/fast_spheres.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/fast_spheres.cc
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/cpk_renderer.hh:24,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/cpk_renderer.cc:19:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=]
   62 |   virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st);
      |                ^~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/cpk_renderer.cc:23:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:294:8: note:   by 'ost::gfx::Entity::Apply'
  294 |   void Apply(const gfx::MapHandleColorOp& op, bool store=true);
      |        ^~~~~
[ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/render_options.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/render_options.cc.o -MF CMakeFiles/ost_gfx.dir/render_options/render_options.cc.o.d -o CMakeFiles/ost_gfx.dir/render_options/render_options.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/render_options.cc
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/trace_renderer_base.hh:27,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/debug_renderer.hh:22,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/debug_renderer.cc:19:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=]
   55 |   virtual void DeepSwap(GfxNode& n);
      |                ^~~~~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note:   by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)'
   58 |   virtual void DeepSwap(GfxObj& go);
      |                ^~~~~~~~
[ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/line_render_options.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/line_render_options.cc.o -MF CMakeFiles/ost_gfx.dir/render_options/line_render_options.cc.o.d -o CMakeFiles/ost_gfx.dir/render_options/line_render_options.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/line_render_options.cc
[ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/custom_render_options.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/custom_render_options.cc.o -MF CMakeFiles/ost_gfx.dir/render_options/custom_render_options.cc.o.d -o CMakeFiles/ost_gfx.dir/render_options/custom_render_options.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/custom_render_options.cc
[ 40%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/cpk_render_options.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/cpk_render_options.cc.o -MF CMakeFiles/ost_gfx.dir/render_options/cpk_render_options.cc.o.d -o CMakeFiles/ost_gfx.dir/render_options/cpk_render_options.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/cpk_render_options.cc
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx.hh:26,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_detail.hh:35,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/backbone_trace.hh:29,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/backbone_trace.cc:22:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=]
   55 |   virtual void DeepSwap(GfxNode& n);
      |                ^~~~~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note:   by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)'
   58 |   virtual void DeepSwap(GfxObj& go);
      |                ^~~~~~~~
[ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/simple_render_options.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/simple_render_options.cc.o -MF CMakeFiles/ost_gfx.dir/render_options/simple_render_options.cc.o.d -o CMakeFiles/ost_gfx.dir/render_options/simple_render_options.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/simple_render_options.cc
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/simple_renderer.cc:26:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=]
   62 |   virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st);
      |                ^~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:294:8: note:   by 'ost::gfx::Entity::Apply'
  294 |   void Apply(const gfx::MapHandleColorOp& op, bool store=true);
      |        ^~~~~
[ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/sline_render_options.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/sline_render_options.cc.o -MF CMakeFiles/ost_gfx.dir/render_options/sline_render_options.cc.o.d -o CMakeFiles/ost_gfx.dir/render_options/sline_render_options.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/sline_render_options.cc
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/simple_renderer.cc: In member function 'void ost::gfx::impl::SimpleRenderer::PrepareRendering(ost::gfx::impl::GfxView&, ost::gfx::IndexedVertexArray&)':
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/simple_renderer.cc:125:25: warning: possibly dangling reference to a temporary [-Wdangling-reference]
  125 |       const geom::Vec3& p0=it->bond.GetFirst().GetPos();
      |                         ^~
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/simple_renderer.cc:125:54: note: the temporary was destroyed at the end of the full expression 'ost::mol::BondHandle::GetFirst() const().ost::mol::AtomHandle::ost::mol::AtomBase.ost::mol::AtomBase::GetPos()'
  125 |       const geom::Vec3& p0=it->bond.GetFirst().GetPos();
      |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/simple_renderer.cc:126:25: warning: possibly dangling reference to a temporary [-Wdangling-reference]
  126 |       const geom::Vec3& p2=it->bond.GetSecond().GetPos();
      |                         ^~
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/simple_renderer.cc:126:55: note: the temporary was destroyed at the end of the full expression 'ost::mol::BondHandle::GetSecond() const().ost::mol::AtomHandle::ost::mol::AtomBase.ost::mol::AtomBase::GetPos()'
  126 |       const geom::Vec3& p2=it->bond.GetSecond().GetPos();
      |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
[ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/line_trace_render_options.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/line_trace_render_options.cc.o -MF CMakeFiles/ost_gfx.dir/render_options/line_trace_render_options.cc.o.d -o CMakeFiles/ost_gfx.dir/render_options/line_trace_render_options.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/line_trace_render_options.cc
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/simple_renderer.cc: In member function 'virtual void ost::gfx::impl::SimpleRenderer::RenderPov(ost::gfx::PovState&, const std::string&)':
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/simple_renderer.cc:203:23: warning: possibly dangling reference to a temporary [-Wdangling-reference]
  203 |     const geom::Vec3& p0=it->bond.GetFirst().GetPos();
      |                       ^~
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/simple_renderer.cc:203:52: note: the temporary was destroyed at the end of the full expression 'ost::mol::BondHandle::GetFirst() const().ost::mol::AtomHandle::ost::mol::AtomBase.ost::mol::AtomBase::GetPos()'
  203 |     const geom::Vec3& p0=it->bond.GetFirst().GetPos();
      |                          ~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/simple_renderer.cc:204:23: warning: possibly dangling reference to a temporary [-Wdangling-reference]
  204 |     const geom::Vec3& p2=it->bond.GetSecond().GetPos();
      |                       ^~
/build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/simple_renderer.cc:204:53: note: the temporary was destroyed at the end of the full expression 'ost::mol::BondHandle::GetSecond() const().ost::mol::AtomHandle::ost::mol::AtomBase.ost::mol::AtomBase::GetPos()'
  204 |     const geom::Vec3& p2=it->bond.GetSecond().GetPos();
      |                          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
[ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/cartoon_render_options.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/cartoon_render_options.cc.o -MF CMakeFiles/ost_gfx.dir/render_options/cartoon_render_options.cc.o.d -o CMakeFiles/ost_gfx.dir/render_options/cartoon_render_options.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/cartoon_render_options.cc
[ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/trace_render_options.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/render_options/trace_render_options.cc.o -MF CMakeFiles/ost_gfx.dir/render_options/trace_render_options.cc.o.d -o CMakeFiles/ost_gfx.dir/render_options/trace_render_options.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/trace_render_options.cc
In file included from /usr/include/c++/14/string:54,
                 from /usr/include/c++/14/bits/locale_classes.h:40,
                 from /usr/include/c++/14/bits/ios_base.h:41,
                 from /usr/include/c++/14/ios:44,
                 from /usr/include/c++/14/istream:40,
                 from /usr/include/c++/14/sstream:40,
                 from /usr/include/c++/14/complex:45,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/base.hh:24,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/module_config.hh:22,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_handle.hh:22,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mol.hh:22,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/find_membrane.hh:22,
                 from /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/find_membrane.cc:1:
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:904:15,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'ost::mol::alg::FindMemParam ost::mol::alg::FindMembrane(ost::mol::EntityView&, bool, bool)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/find_membrane.cc:1053:20:
/usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized]
 1084 |       { return _M_string_length; }
      |                ^~~~~~~~~~~~~~~~
In file included from /usr/include/boost/variant.hpp:17,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/query.hh:30,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_handle.hh:26:
/usr/include/boost/variant/variant.hpp: In function 'ost::mol::alg::FindMemParam ost::mol::alg::FindMembrane(ost::mol::EntityView&, bool, bool)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In file included from /usr/include/c++/14/ios:42:
In static member function 'static constexpr void std::char_traits<char>::assign(char_type&, const char_type&)',
    inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:433:23,
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:882:18,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'ost::mol::alg::FindMemParam ost::mol::alg::FindMembrane(ost::mol::EntityView&, bool, bool)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/find_membrane.cc:1053:20:
/usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits<char>::char_type*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized]
  350 |         __c1 = __c2;
      |                ^~~~
/usr/include/boost/variant/variant.hpp: In function 'ost::mol::alg::FindMemParam ost::mol::alg::FindMembrane(ost::mol::EntityView&, bool, bool)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'ost::mol::alg::FindMemParam ost::mol::alg::FindMembrane(ost::mol::EntityView&, bool, bool)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/find_membrane.cc:1053:20:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'ost::mol::alg::FindMemParam ost::mol::alg::FindMembrane(ost::mol::EntityView&, bool, bool)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'ost::mol::alg::FindMemParam ost::mol::alg::FindMembrane(ost::mol::EntityView&, bool, bool)' at /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/find_membrane.cc:1053:20:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In function 'ost::mol::alg::FindMemParam ost::mol::alg::FindMembrane(ost::mol::EntityView&, bool, bool)':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
[ 41%] Linking CXX shared module ../../../../stage/lib/python3.12/dist-packages/ost/img/alg/_ost_img_alg.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_img_alg.dir/link.txt --verbose=1
[ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/map_handle_color_op.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/color_ops/map_handle_color_op.cc.o -MF CMakeFiles/ost_gfx.dir/color_ops/map_handle_color_op.cc.o.d -o CMakeFiles/ost_gfx.dir/color_ops/map_handle_color_op.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/map_handle_color_op.cc
[ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/map_iso.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/map_iso.cc.o -MF CMakeFiles/ost_gfx.dir/map_iso.cc.o.d -o CMakeFiles/ost_gfx.dir/map_iso.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/map_iso.cc
[ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/map_slab.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/map_slab.cc.o -MF CMakeFiles/ost_gfx.dir/map_slab.cc.o.d -o CMakeFiles/ost_gfx.dir/map_slab.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/map_slab.cc
[ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/map_iso_gen.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/map_iso_gen.cc.o -MF CMakeFiles/ost_gfx.dir/impl/map_iso_gen.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/map_iso_gen.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/map_iso_gen.cc
[ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/map_iso_gen_s.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/map_iso_gen_s.cc.o -MF CMakeFiles/ost_gfx.dir/impl/map_iso_gen_s.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/map_iso_gen_s.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/map_iso_gen_s.cc
[ 41%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/map_iso_gen_o.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/map_iso_gen_o.cc.o -MF CMakeFiles/ost_gfx.dir/impl/map_iso_gen_o.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/map_iso_gen_o.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/map_iso_gen_o.cc
[ 42%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/map_octree.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/map_octree.cc.o -MF CMakeFiles/ost_gfx.dir/impl/map_octree.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/map_octree.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/map_octree.cc
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/_ost_img_alg.dir/link.d -Wl,-z,relro -shared  -o ../../../../stage/lib/python3.12/dist-packages/ost/img/alg/_ost_img_alg.so CMakeFiles/_ost_img_alg.dir/wrap_alg.cc.o CMakeFiles/_ost_img_alg.dir/export_filter.cc.o CMakeFiles/_ost_img_alg.dir/export_normalizer.cc.o CMakeFiles/_ost_img_alg.dir/export_transcendentals.cc.o CMakeFiles/_ost_img_alg.dir/export_polar.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_img_alg.so.2.9.0 /usr/lib/x86_64-linux-gnu/libpython3.12.so /usr/lib/x86_64-linux-gnu/libboost_python312.so.1.83.0 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so ../../../../stage/lib/libost_img.so.2.9.0 ../../../../stage/lib/libost_info.so.2.9.0 ../../../../stage/lib/libost_base.so.2.9.0 ../../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/img/alg/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/img/alg/./__init__.pyc\",\"__init__.py\",doraise=True)"
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 42%] Building CXX object modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/octree_isocont.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DOST_MODULE_OST_GFX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/src/CMakeFiles/ost_gfx.dir/impl/octree_isocont.cc.o -MF CMakeFiles/ost_gfx.dir/impl/octree_isocont.cc.o.d -o CMakeFiles/ost_gfx.dir/impl/octree_isocont.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/octree_isocont.cc
[ 42%] Built target _ost_img_alg
[ 42%] Linking CXX shared library ../../../../stage/lib/libost_mol_alg.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/atom_scattering_properties.txt /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/atom_scattering_properties.txt
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/stereo_chemical_props.txt /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/stereo_chemical_props.txt
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_mol_alg.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/ost_mol_alg.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_mol_alg.so.2.9 -o ../../../../stage/lib/libost_mol_alg.so.2.9.0 CMakeFiles/ost_mol_alg.dir/svd_superpose.cc.o CMakeFiles/ost_mol_alg.dir/clash_score.cc.o CMakeFiles/ost_mol_alg.dir/sec_structure_segments.cc.o CMakeFiles/ost_mol_alg.dir/local_dist_diff_test.cc.o CMakeFiles/ost_mol_alg.dir/distance_test_common.cc.o CMakeFiles/ost_mol_alg.dir/distance_rmsd_test.cc.o CMakeFiles/ost_mol_alg.dir/superpose_frames.cc.o CMakeFiles/ost_mol_alg.dir/filter_clashes.cc.o CMakeFiles/ost_mol_alg.dir/construct_cbeta.cc.o CMakeFiles/ost_mol_alg.dir/trajectory_analysis.cc.o CMakeFiles/ost_mol_alg.dir/structure_analysis.cc.o CMakeFiles/ost_mol_alg.dir/consistency_checks.cc.o CMakeFiles/ost_mol_alg.dir/pdbize.cc.o CMakeFiles/ost_mol_alg.dir/adjacency_bitmap.cc.o CMakeFiles/ost_mol_alg.dir/contact_overlap.cc.o CMakeFiles/ost_mol_alg.dir/domain_find.cc.o CMakeFiles/ost_mol_alg.dir/similarity_matrix.cc.o CMakeFiles/ost_mol_alg.dir/accessibility.cc.o CMakeFiles/ost_mol_alg.dir/sec_struct.cc.o CMakeFiles/ost_mol_alg.dir/nonstandard.cc.o CMakeFiles/ost_mol_alg.dir/molck.cc.o CMakeFiles/ost_mol_alg.dir/find_membrane.cc.o CMakeFiles/ost_mol_alg.dir/entity_to_density.cc.o CMakeFiles/ost_mol_alg.dir/biounit.cc.o CMakeFiles/ost_mol_alg.dir/gdt.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../../stage/lib/libost_img_alg.so.2.9.0 ../../../../stage/lib/libost_seq_alg.so.2.9.0 ../../../../stage/lib/libost_conop.so.2.9.0 ../../../../stage/lib/libost_img.so.2.9.0 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libparasail.so ../../../../stage/lib/libost_db.so.2.9.0 ../../../../stage/lib/libost_seq.so.2.9.0 ../../../../stage/lib/libost_mol.so.2.9.0 ../../../../stage/lib/libost_info.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../../stage/lib/libost_base.so.2.9.0 ../../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E cmake_symlink_library ../../../../stage/lib/libost_mol_alg.so.2.9.0 ../../../../stage/lib/libost_mol_alg.so.2.9 ../../../../stage/lib/libost_mol_alg.so
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 42%] Built target ost_mol_alg
make  -f modules/io/src/CMakeFiles/ost_io.dir/build.make modules/io/src/CMakeFiles/ost_io.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/io/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src/CMakeFiles/ost_io.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/io/src/CMakeFiles/ost_io.dir/build.make modules/io/src/CMakeFiles/ost_io.dir/build
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 42%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/io_manager.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/io_manager.cc.o -MF CMakeFiles/ost_io.dir/io_manager.cc.o.d -o CMakeFiles/ost_io.dir/io_manager.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/io_manager.cc
[ 42%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/convert.cc.o
[ 42%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_crd_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/convert.cc.o -MF CMakeFiles/ost_io.dir/convert.cc.o.d -o CMakeFiles/ost_io.dir/convert.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/convert.cc
[ 42%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/io_utils.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/io_utils.cc.o -MF CMakeFiles/ost_io.dir/io_utils.cc.o.d -o CMakeFiles/ost_io.dir/io_utils.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/io_utils.cc
[ 42%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_pqr_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_crd_handler.cc.o -MF CMakeFiles/ost_io.dir/mol/entity_io_crd_handler.cc.o.d -o CMakeFiles/ost_io.dir/mol/entity_io_crd_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_crd_handler.cc
[ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/pdb_reader.cc.o
[ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_mae_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_pqr_handler.cc.o -MF CMakeFiles/ost_io.dir/mol/entity_io_pqr_handler.cc.o.d -o CMakeFiles/ost_io.dir/mol/entity_io_pqr_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_pqr_handler.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_mae_handler.cc.o -MF CMakeFiles/ost_io.dir/mol/entity_io_mae_handler.cc.o.d -o CMakeFiles/ost_io.dir/mol/entity_io_mae_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_mae_handler.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/pdb_reader.cc.o -MF CMakeFiles/ost_io.dir/mol/pdb_reader.cc.o.d -o CMakeFiles/ost_io.dir/mol/pdb_reader.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/pdb_reader.cc
[ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/pdb_writer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/pdb_writer.cc.o -MF CMakeFiles/ost_io.dir/mol/pdb_writer.cc.o.d -o CMakeFiles/ost_io.dir/mol/pdb_writer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/pdb_writer.cc
[ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_sdf_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_sdf_handler.cc.o -MF CMakeFiles/ost_io.dir/mol/entity_io_sdf_handler.cc.o.d -o CMakeFiles/ost_io.dir/mol/entity_io_sdf_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_sdf_handler.cc
[ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_pdb_handler.cc.o
[ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_mmcif_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_pdb_handler.cc.o -MF CMakeFiles/ost_io.dir/mol/entity_io_pdb_handler.cc.o.d -o CMakeFiles/ost_io.dir/mol/entity_io_pdb_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_pdb_handler.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/entity_io_mmcif_handler.cc.o -MF CMakeFiles/ost_io.dir/mol/entity_io_mmcif_handler.cc.o.d -o CMakeFiles/ost_io.dir/mol/entity_io_mmcif_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_mmcif_handler.cc
[ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/sdf_reader.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/sdf_reader.cc.o -MF CMakeFiles/ost_io.dir/mol/sdf_reader.cc.o.d -o CMakeFiles/ost_io.dir/mol/sdf_reader.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/sdf_reader.cc
[ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/sdf_writer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/sdf_writer.cc.o -MF CMakeFiles/ost_io.dir/mol/sdf_writer.cc.o.d -o CMakeFiles/ost_io.dir/mol/sdf_writer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/sdf_writer.cc
[ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/save_entity.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/save_entity.cc.o -MF CMakeFiles/ost_io.dir/mol/save_entity.cc.o.d -o CMakeFiles/ost_io.dir/mol/save_entity.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/save_entity.cc
[ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/load_entity.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/load_entity.cc.o -MF CMakeFiles/ost_io.dir/mol/load_entity.cc.o.d -o CMakeFiles/ost_io.dir/mol/load_entity.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/load_entity.cc
[ 43%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/surface_io_msms_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/surface_io_msms_handler.cc.o -MF CMakeFiles/ost_io.dir/mol/surface_io_msms_handler.cc.o.d -o CMakeFiles/ost_io.dir/mol/surface_io_msms_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/surface_io_msms_handler.cc
[ 45%] Linking CXX shared module ../../../../stage/lib/python3.12/dist-packages/ost/mol/_ost_mol.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_mol.dir/link.txt --verbose=1
[ 45%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/load_surface.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/load_surface.cc.o -MF CMakeFiles/ost_io.dir/mol/load_surface.cc.o.d -o CMakeFiles/ost_io.dir/mol/load_surface.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/load_surface.cc
[ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/chemdict_parser.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/chemdict_parser.cc.o -MF CMakeFiles/ost_io.dir/mol/chemdict_parser.cc.o.d -o CMakeFiles/ost_io.dir/mol/chemdict_parser.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/chemdict_parser.cc
[ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/io_profile.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/io_profile.cc.o -MF CMakeFiles/ost_io.dir/mol/io_profile.cc.o.d -o CMakeFiles/ost_io.dir/mol/io_profile.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/io_profile.cc
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_crd_handler.cc: In constructor 'ost::io::CRDReader::CRDReader(const boost::filesystem::path&)':
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_crd_handler.cc:63:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations]
   63 |   if (boost::iequals(".gz", boost::filesystem::extension(loc))) {
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_crd_handler.cc:27:
/usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here
   29 | inline std::string extension(const path& p)
      |                    ^~~~~~~~~
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/_ost_mol.dir/link.d -Wl,-z,relro -shared  -o ../../../../stage/lib/python3.12/dist-packages/ost/mol/_ost_mol.so CMakeFiles/_ost_mol.dir/export_atom.cc.o CMakeFiles/_ost_mol.dir/export_atom_view.cc.o CMakeFiles/_ost_mol.dir/export_bond.cc.o CMakeFiles/_ost_mol.dir/export_chain.cc.o CMakeFiles/_ost_mol.dir/export_chain_view.cc.o CMakeFiles/_ost_mol.dir/export_coord_group.cc.o CMakeFiles/_ost_mol.dir/export_coord_frame.cc.o CMakeFiles/_ost_mol.dir/export_editors.cc.o CMakeFiles/_ost_mol.dir/export_entity.cc.o CMakeFiles/_ost_mol.dir/export_entity_view.cc.o CMakeFiles/_ost_mol.dir/export_property_id.cc.o CMakeFiles/_ost_mol.dir/export_query.cc.o CMakeFiles/_ost_mol.dir/export_residue.cc.o CMakeFiles/_ost_mol.dir/export_residue_view.cc.o CMakeFiles/_ost_mol.dir/export_surface.cc.o CMakeFiles/_ost_mol.dir/export_bounding_box.cc.o CMakeFiles/_ost_mol.dir/export_query_view_wrapper.cc.o CMakeFiles/_ost_mol.dir/export_torsion.cc.o CMakeFiles/_ost_mol.dir/export_visitor.cc.o CMakeFiles/_ost_mol.dir/wrap_mol.cc.o CMakeFiles/_ost_mol.dir/export_entity_property_mapper.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_mol.so.2.9.0 /usr/lib/x86_64-linux-gnu/libpython3.12.so /usr/lib/x86_64-linux-gnu/libboost_python312.so.1.83.0 ../../../../stage/lib/libost_info.so.2.9.0 ../../../../stage/lib/libost_base.so.2.9.0 ../../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/./__init__.pyc\",\"__init__.py\",doraise=True)"
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 46%] Built target _ost_mol
make  -f modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/build.make modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/base/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/DependInfo.cmake "--color="
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/surface_io_msms_handler.cc: In function 'std::pair<boost::filesystem::path, boost::filesystem::path> ost::io::{anonymous}::detect_files(const boost::filesystem::path&)':
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/surface_io_msms_handler.cc:36:45: warning: 'boost::filesystem::path boost::filesystem::change_extension(const path&, const path&)' is deprecated: Use path::replace_extension() instead [-Wdeprecated-declarations]
   36 |   return std::make_pair(bf::change_extension(loc, ".vert"),
      |                         ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/surface_io_msms_handler.cc:25:
/usr/include/boost/filesystem/convenience.hpp:41:13: note: declared here
   41 | inline path change_extension(const path& p, const path& new_extension)
      |             ^~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/surface_io_msms_handler.cc:37:45: warning: 'boost::filesystem::path boost::filesystem::change_extension(const path&, const path&)' is deprecated: Use path::replace_extension() instead [-Wdeprecated-declarations]
   37 |                         bf::change_extension(loc, ".face"));
      |                         ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/usr/include/boost/filesystem/convenience.hpp:41:13: note: declared here
   41 | inline path change_extension(const path& p, const path& new_extension)
      |             ^~~~~~~~~~~~~~~~
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/build.make modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/build
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 46%] Building CXX object modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/export_sequence.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/export_sequence.cc.o -MF CMakeFiles/_ost_seq.dir/export_sequence.cc.o.d -o CMakeFiles/_ost_seq.dir/export_sequence.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/base/pymod/export_sequence.cc
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_mae_handler.cc: In constructor 'ost::io::MAEReader::MAEReader(const boost::filesystem::path&)':
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_mae_handler.cc:60:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations]
   60 |   if (boost::iequals(".gz", boost::filesystem::extension(loc))) {
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_mae_handler.cc:31:
/usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here
   29 | inline std::string extension(const path& p)
      |                    ^~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/pdb_writer.cc: In constructor 'ost::io::PDBWriter::PDBWriter(const boost::filesystem::path&, const ost::io::IOProfile&)':
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/pdb_writer.cc:395:58: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations]
  395 |   if (boost::iequals(".pqr", boost::filesystem::extension(filename))) {
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/pdb_writer.cc:28:
/usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here
   29 | inline std::string extension(const path& p)
      |                    ^~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/pdb_writer.cc:398:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations]
  398 |   if (boost::iequals(".gz", boost::filesystem::extension(filename))) {
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here
   29 | inline std::string extension(const path& p)
      |                    ^~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/pdb_writer.cc: In constructor 'ost::io::PDBWriter::PDBWriter(const String&, const ost::io::IOProfile&)':
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/pdb_writer.cc:414:58: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations]
  414 |   if (boost::iequals(".pqr", boost::filesystem::extension(filename))) {
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here
   29 | inline std::string extension(const path& p)
      |                    ^~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/pdb_writer.cc:417:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations]
  417 |   if (boost::iequals(".gz", boost::filesystem::extension(filename))) {
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here
   29 | inline std::string extension(const path& p)
      |                    ^~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_pdb_handler.cc: In member function 'virtual void ost::io::EntityIOPDBHandler::Export(const ost::mol::EntityView&, const boost::filesystem::path&) const':
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_pdb_handler.cc:52:50: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations]
   52 |   if (boost::iequals(boost::filesystem::extension(loc), ".pqr")) {
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_pdb_handler.cc:27:
/usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here
   29 | inline std::string extension(const path& p)
      |                    ^~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_pqr_handler.cc: In constructor 'ost::io::PQRReader::PQRReader(const boost::filesystem::path&)':
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_pqr_handler.cc:61:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations]
   61 |   if (boost::iequals(".gz", boost::filesystem::extension(loc))) {
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_pqr_handler.cc:28:
/usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here
   29 | inline std::string extension(const path& p)
      |                    ^~~~~~~~~
In file included from /usr/include/eigen3/Eigen/Core:341,
                 from /usr/include/eigen3/Eigen/QR:11,
                 from /usr/include/eigen3/Eigen/SVD:11,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/cartoon_renderer.cc:26:
/usr/include/eigen3/Eigen/src/Core/products/TriangularMatrixVector.h: In function 'static void Eigen::internal::trmv_selector<Mode, 1>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Transpose<const Eigen::Block<const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, -1, false> >; Rhs = Eigen::Transpose<const Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, const Eigen::Matrix<float, 1, -1> >, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Block<Eigen::Matrix<float, -1, -1>, -1, -1, false>, -1, 1, true>, -1, 1, false> > > >; Dest = Eigen::Transpose<Eigen::Block<Eigen::Block<Eigen::Matrix<float, -1, -1, 1, -1, -1>, 1, -1, true>, 1, -1, false> >; int Mode = 6]':
/usr/include/eigen3/Eigen/src/Core/products/TriangularMatrixVector.h:332:12: warning: 'result' may be used uninitialized [-Wmaybe-uninitialized]
  327 |     internal::triangular_matrix_vector_product
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  328 |       <Index,Mode,
      |       ~~~~~~~~~~~~
  329 |        LhsScalar, LhsBlasTraits::NeedToConjugate,
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  330 |        RhsScalar, RhsBlasTraits::NeedToConjugate,
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  331 |        RowMajor>
      |        ~~~~~~~~~
  332 |       ::run(actualLhs.rows(),actualLhs.cols(),
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  333 |             actualLhs.data(),actualLhs.outerStride(),
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  334 |             actualRhsPtr,1,
      |             ~~~~~~~~~~~~~~~
  335 |             dest.data(),dest.innerStride(),
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  336 |             actualAlpha);
      |             ~~~~~~~~~~~~
/usr/include/eigen3/Eigen/src/Core/products/TriangularMatrixVector.h:105:24: note: by argument 5 of type 'const float*' to 'static void Eigen::internal::triangular_matrix_vector_product<Index, Mode, LhsScalar, ConjLhs, RhsScalar, ConjRhs, 1, Version>::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, const ResScalar&) [with Index = long int; int Mode = 6; LhsScalar = float; bool ConjLhs = false; RhsScalar = float; bool ConjRhs = false; int Version = 0]' declared here
  105 | EIGEN_DONT_INLINE void triangular_matrix_vector_product<Index,Mode,LhsScalar,ConjLhs,RhsScalar,ConjRhs,RowMajor,Version>
      |                        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/sdf_reader.cc: In member function 'void ost::io::SDFReader::ClearState(const boost::filesystem::path&)':
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/sdf_reader.cc:125:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations]
  125 |   if (boost::iequals(".gz", boost::filesystem::extension(loc))) {
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/sdf_reader.cc:24:
/usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here
   29 | inline std::string extension(const path& p)
      |                    ^~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/pdb_reader.cc: In member function 'void ost::io::PDBReader::Init(const boost::filesystem::path&)':
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/pdb_reader.cc:91:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations]
   91 |   if (boost::iequals(".gz", boost::filesystem::extension(loc))) {
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/pdb_reader.cc:20:
/usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here
   29 | inline std::string extension(const path& p)
      |                    ^~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/pdb_reader.cc:99:49: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations]
   99 |   if(boost::iequals(boost::filesystem::extension(loc), ".pqr")) {
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here
   29 | inline std::string extension(const path& p)
      |                    ^~~~~~~~~
[ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/dcd_io.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/dcd_io.cc.o -MF CMakeFiles/ost_io.dir/mol/dcd_io.cc.o.d -o CMakeFiles/ost_io.dir/mol/dcd_io.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/dcd_io.cc
[ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/star_parser.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/star_parser.cc.o -MF CMakeFiles/ost_io.dir/mol/star_parser.cc.o.d -o CMakeFiles/ost_io.dir/mol/star_parser.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/star_parser.cc
[ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/star_writer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/star_writer.cc.o -MF CMakeFiles/ost_io.dir/mol/star_writer.cc.o.d -o CMakeFiles/ost_io.dir/mol/star_writer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/star_writer.cc
[ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/mmcif_reader.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/mmcif_reader.cc.o -MF CMakeFiles/ost_io.dir/mol/mmcif_reader.cc.o.d -o CMakeFiles/ost_io.dir/mol/mmcif_reader.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/mmcif_reader.cc
[ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/mmcif_info.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/mmcif_info.cc.o -MF CMakeFiles/ost_io.dir/mol/mmcif_info.cc.o.d -o CMakeFiles/ost_io.dir/mol/mmcif_info.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/mmcif_info.cc
[ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/mmcif_writer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/mmcif_writer.cc.o -MF CMakeFiles/ost_io.dir/mol/mmcif_writer.cc.o.d -o CMakeFiles/ost_io.dir/mol/mmcif_writer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/mmcif_writer.cc
[ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/pdb_str.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/pdb_str.cc.o -MF CMakeFiles/ost_io.dir/mol/pdb_str.cc.o.d -o CMakeFiles/ost_io.dir/mol/pdb_str.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/pdb_str.cc
[ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/sdf_str.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/sdf_str.cc.o -MF CMakeFiles/ost_io.dir/mol/sdf_str.cc.o.d -o CMakeFiles/ost_io.dir/mol/sdf_str.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/sdf_str.cc
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/star_writer.cc: In member function 'void ost::io::StarWriter::Write(const String&, const String&)':
/build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/star_writer.cc:52:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations]
   52 |   if (boost::iequals(".gz", boost::filesystem::extension(filename))) {
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /usr/include/boost/filesystem.hpp:21,
                 from /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/star_writer.cc:22:
/usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here
   29 | inline std::string extension(const path& p)
      |                    ^~~~~~~~~
[ 46%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/mmcif_str.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/mmcif_str.cc.o -MF CMakeFiles/ost_io.dir/mol/mmcif_str.cc.o.d -o CMakeFiles/ost_io.dir/mol/mmcif_str.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/mmcif_str.cc
[ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/stereochemical_params_reader.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/stereochemical_params_reader.cc.o -MF CMakeFiles/ost_io.dir/mol/stereochemical_params_reader.cc.o.d -o CMakeFiles/ost_io.dir/mol/stereochemical_params_reader.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/stereochemical_params_reader.cc
[ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/mol/omf.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/mol/omf.cc.o -MF CMakeFiles/ost_io.dir/mol/omf.cc.o.d -o CMakeFiles/ost_io.dir/mol/omf.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/omf.cc
[ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/seq/clustal_io_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/seq/clustal_io_handler.cc.o -MF CMakeFiles/ost_io.dir/seq/clustal_io_handler.cc.o.d -o CMakeFiles/ost_io.dir/seq/clustal_io_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/clustal_io_handler.cc
[ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/seq/load.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/seq/load.cc.o -MF CMakeFiles/ost_io.dir/seq/load.cc.o.d -o CMakeFiles/ost_io.dir/seq/load.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/load.cc
[ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/seq/save.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/seq/save.cc.o -MF CMakeFiles/ost_io.dir/seq/save.cc.o.d -o CMakeFiles/ost_io.dir/seq/save.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/save.cc
[ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/seq/fasta_io_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/seq/fasta_io_handler.cc.o -MF CMakeFiles/ost_io.dir/seq/fasta_io_handler.cc.o.d -o CMakeFiles/ost_io.dir/seq/fasta_io_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/fasta_io_handler.cc
[ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/seq/pir_io_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/seq/pir_io_handler.cc.o -MF CMakeFiles/ost_io.dir/seq/pir_io_handler.cc.o.d -o CMakeFiles/ost_io.dir/seq/pir_io_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/pir_io_handler.cc
[ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/seq/promod_io_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/seq/promod_io_handler.cc.o -MF CMakeFiles/ost_io.dir/seq/promod_io_handler.cc.o.d -o CMakeFiles/ost_io.dir/seq/promod_io_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/promod_io_handler.cc
[ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/seq/hhm_io_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/seq/hhm_io_handler.cc.o -MF CMakeFiles/ost_io.dir/seq/hhm_io_handler.cc.o.d -o CMakeFiles/ost_io.dir/seq/hhm_io_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/hhm_io_handler.cc
[ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/seq/pssm_io_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/seq/pssm_io_handler.cc.o -MF CMakeFiles/ost_io.dir/seq/pssm_io_handler.cc.o.d -o CMakeFiles/ost_io.dir/seq/pssm_io_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/pssm_io_handler.cc
[ 47%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/load_map.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/load_map.cc.o -MF CMakeFiles/ost_io.dir/img/load_map.cc.o.d -o CMakeFiles/ost_io.dir/img/load_map.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/load_map.cc
[ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_dx_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_dx_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_dx_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_dx_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_dx_handler.cc
/build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/pssm_io_handler.cc: In member function 'virtual void ost::io::PssmIOHandler::Import(ost::seq::ProfileHandle&, const boost::filesystem::path&)':
/build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/pssm_io_handler.cc:47:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations]
   47 |   if (boost::iequals(".gz", boost::filesystem::extension(loc))) {
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/pssm_io_handler.cc:27:
/usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here
   29 | inline std::string extension(const path& p)
      |                    ^~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/hhm_io_handler.cc: In member function 'virtual void ost::io::HhmIOHandler::Import(ost::seq::ProfileHandle&, const boost::filesystem::path&)':
/build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/hhm_io_handler.cc:133:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations]
  133 |   if (boost::iequals(".gz", boost::filesystem::extension(loc))) {
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/hhm_io_handler.cc:27:
/usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here
   29 | inline std::string extension(const path& p)
      |                    ^~~~~~~~~
[ 48%] Linking CXX shared library ../../../stage/lib/libost_gfx.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/test_texture.png /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/textures/test_texture.png
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/glyph_texture.png /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/textures/glyph_texture.png
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_gfx.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/ost_gfx.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_gfx.so.2.9 -o ../../../stage/lib/libost_gfx.so.2.9.0 CMakeFiles/ost_gfx.dir/bitmap_io.cc.o CMakeFiles/ost_gfx.dir/exporter.cc.o CMakeFiles/ost_gfx.dir/collada_exporter.cc.o CMakeFiles/ost_gfx.dir/color.cc.o CMakeFiles/ost_gfx.dir/primitives.cc.o CMakeFiles/ost_gfx.dir/entity.cc.o CMakeFiles/ost_gfx.dir/symmetry_node.cc.o CMakeFiles/ost_gfx.dir/gfx_node.cc.o CMakeFiles/ost_gfx.dir/gfx_object.cc.o CMakeFiles/ost_gfx.dir/gfx_prim.cc.o CMakeFiles/ost_gfx.dir/gfx_test_object.cc.o CMakeFiles/ost_gfx.dir/input.cc.o CMakeFiles/ost_gfx.dir/prim_list.cc.o CMakeFiles/ost_gfx.dir/scene.cc.o CMakeFiles/ost_gfx.dir/selection.cc.o CMakeFiles/ost_gfx.dir/surface.cc.o CMakeFiles/ost_gfx.dir/gradient.cc.o CMakeFiles/ost_gfx.dir/gradient_manager.cc.o CMakeFiles/ost_gfx.dir/vertex_array.cc.o CMakeFiles/ost_gfx.dir/vertex_array_helper.cc.o CMakeFiles/ost_gfx.dir/material.cc.o CMakeFiles/ost_gfx.dir/povray.cc.o CMakeFiles/ost_gfx.dir/gost_exporter.cc.o CMakeFiles/ost_gfx.dir/texture.cc.o CMakeFiles/ost_gfx.dir/color_ops/color_op.cc.o CMakeFiles/ost_gfx.dir/color_ops/by_element_color_op.cc.o CMakeFiles/ost_gfx.dir/color_ops/by_chain_color_op.cc.o CMakeFiles/ost_gfx.dir/color_ops/uniform_color_op.cc.o CMakeFiles/ost_gfx.dir/color_ops/gradient_color_op.cc.o CMakeFiles/ost_gfx.dir/color_ops/entity_view_color_op.cc.o CMakeFiles/ost_gfx.dir/color_ops/basic_gradient_color_op.cc.o CMakeFiles/ost_gfx.dir/color_ops/gradient_level_color_op.cc.o CMakeFiles/ost_gfx.dir/impl/entity_renderer.cc.o CMakeFiles/ost_gfx.dir/impl/entity_detail.cc.o CMakeFiles/ost_gfx.dir/impl/cartoon_renderer.cc.o CMakeFiles/ost_gfx.dir/impl/custom_renderer.cc.o CMakeFiles/ost_gfx.dir/impl/cpk_renderer.cc.o CMakeFiles/ost_gfx.dir/impl/debug_renderer.cc.o CMakeFiles/ost_gfx.dir/impl/simple_renderer.cc.o CMakeFiles/ost_gfx.dir/impl/sline_renderer.cc.o CMakeFiles/ost_gfx.dir/impl/line_trace_renderer.cc.o CMakeFiles/ost_gfx.dir/impl/backbone_trace.cc.o CMakeFiles/ost_gfx.dir/impl/connect_renderer_base.cc.o CMakeFiles/ost_gfx.dir/impl/trace_renderer_base.cc.o CMakeFiles/ost_gfx.dir/impl/mapped_property.cc.o CMakeFiles/ost_gfx.dir/impl/tabulated_trig.cc.o CMakeFiles/ost_gfx.dir/impl/trace_renderer.cc.o CMakeFiles/ost_gfx.dir/impl/fast_spheres.cc.o CMakeFiles/ost_gfx.dir/render_options/render_options.cc.o CMakeFiles/ost_gfx.dir/render_options/line_render_options.cc.o CMakeFiles/ost_gfx.dir/render_options/custom_render_options.cc.o CMakeFiles/ost_gfx.dir/render_options/cpk_render_options.cc.o CMakeFiles/ost_gfx.dir/render_options/simple_render_options.cc.o CMakeFiles/ost_gfx.dir/render_options/sline_render_options.cc.o CMakeFiles/ost_gfx.dir/render_options/line_trace_render_options.cc.o CMakeFiles/ost_gfx.dir/render_options/cartoon_render_options.cc.o CMakeFiles/ost_gfx.dir/render_options/trace_render_options.cc.o CMakeFiles/ost_gfx.dir/color_ops/map_handle_color_op.cc.o CMakeFiles/ost_gfx.dir/map_iso.cc.o CMakeFiles/ost_gfx.dir/map_slab.cc.o CMakeFiles/ost_gfx.dir/impl/map_iso_gen.cc.o CMakeFiles/ost_gfx.dir/impl/map_iso_gen_s.cc.o CMakeFiles/ost_gfx.dir/impl/map_iso_gen_o.cc.o CMakeFiles/ost_gfx.dir/impl/map_octree.cc.o CMakeFiles/ost_gfx.dir/impl/octree_isocont.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_conop.so.2.9.0 ../../../stage/lib/libost_img_alg.so.2.9.0 /usr/lib/x86_64-linux-gnu/libOpenGL.so /usr/lib/x86_64-linux-gnu/libGLX.so /usr/lib/x86_64-linux-gnu/libGLU.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so ../../../stage/lib/libost_db.so.2.9.0 ../../../stage/lib/libost_seq.so.2.9.0 ../../../stage/lib/libost_mol.so.2.9.0 /usr/lib/x86_64-[ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_spi_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_spi_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_spi_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_spi_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_spi_handler.cc
[ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_situs_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_situs_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_situs_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_situs_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_situs_handler.cc
[ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_mrc_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_mrc_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_mrc_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_mrc_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_mrc_handler.cc
[ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_dm3_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_dm3_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_dm3_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_dm3_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_dm3_handler.cc
[ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_tiff_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_tiff_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_tiff_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_tiff_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_tiff_handler.cc
[ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_dat_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_dat_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_dat_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_dat_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_dat_handler.cc
linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_img.so.2.9.0 ../../../stage/lib/libost_info.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 ../../../stage/lib/libost_base.so.2.9.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E cmake_symlink_library ../../../stage/lib/libost_gfx.so.2.9.0 ../../../stage/lib/libost_gfx.so.2.9 ../../../stage/lib/libost_gfx.so
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 48%] Built target ost_gfx
[ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_ipl_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_ipl_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_ipl_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_ipl_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_ipl_handler.cc
/build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_dx_handler.cc: In member function 'virtual void ost::io::MapIODxHandler::Import(ost::img::MapHandle&, const boost::filesystem::path&, const ost::io::ImageFormatBase&)':
/build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_dx_handler.cc:97:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations]
   97 |   if (boost::iequals(".gz", boost::filesystem::extension(loc))) {
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_dx_handler.cc:31:
/usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here
   29 | inline std::string extension(const path& p)
      |                    ^~~~~~~~~
[ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_jpk_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_jpk_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_jpk_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_jpk_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_jpk_handler.cc
[ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_nanoscope_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_nanoscope_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_nanoscope_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_nanoscope_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_nanoscope_handler.cc
[ 48%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_png_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_png_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_png_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_png_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_png_handler.cc
[ 50%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/map_io_df3_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/map_io_df3_handler.cc.o -MF CMakeFiles/ost_io.dir/img/map_io_df3_handler.cc.o.d -o CMakeFiles/ost_io.dir/img/map_io_df3_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_df3_handler.cc
[ 50%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/image_format.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/image_format.cc.o -MF CMakeFiles/ost_io.dir/img/image_format.cc.o.d -o CMakeFiles/ost_io.dir/img/image_format.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/image_format.cc
[ 50%] Building CXX object modules/io/src/CMakeFiles/ost_io.dir/img/tiff_util.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_IO -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/src/CMakeFiles/ost_io.dir/img/tiff_util.cc.o -MF CMakeFiles/ost_io.dir/img/tiff_util.cc.o.d -o CMakeFiles/ost_io.dir/img/tiff_util.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/tiff_util.cc
[ 50%] Building CXX object modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/export_profile_handle.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/export_profile_handle.cc.o -MF CMakeFiles/_ost_seq.dir/export_profile_handle.cc.o.d -o CMakeFiles/_ost_seq.dir/export_profile_handle.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/base/pymod/export_profile_handle.cc
[ 50%] Building CXX object modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/wrap_seq.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_seq_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/wrap_seq.cc.o -MF CMakeFiles/_ost_seq.dir/wrap_seq.cc.o.d -o CMakeFiles/_ost_seq.dir/wrap_seq.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/base/pymod/wrap_seq.cc
[ 50%] Linking CXX shared module ../../../../stage/lib/python3.12/dist-packages/ost/seq/_ost_seq.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_seq.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/_ost_seq.dir/link.d -Wl,-z,relro -shared  -o ../../../../stage/lib/python3.12/dist-packages/ost/seq/_ost_seq.so CMakeFiles/_ost_seq.dir/export_sequence.cc.o CMakeFiles/_ost_seq.dir/export_profile_handle.cc.o CMakeFiles/_ost_seq.dir/wrap_seq.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_seq.so.2.9.0 /usr/lib/x86_64-linux-gnu/libpython3.12.so /usr/lib/x86_64-linux-gnu/libboost_python312.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../../stage/lib/libost_mol.so.2.9.0 ../../../../stage/lib/libost_info.so.2.9.0 ../../../../stage/lib/libost_base.so.2.9.0 ../../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/seq/base/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/seq/./__init__.pyc\",\"__init__.py\",doraise=True)"
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 50%] Built target _ost_seq
make  -f modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/build.make modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/depend
make  -f modules/db/pymod/CMakeFiles/_ost_db.dir/build.make modules/db/pymod/CMakeFiles/_ost_db.dir/depend
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make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/db/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/pymod/CMakeFiles/_ost_db.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 50%] Building CXX object modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/export_tmalign.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_bindings_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/export_tmalign.cc.o -MF CMakeFiles/_ost_bindings.dir/export_tmalign.cc.o.d -o CMakeFiles/_ost_bindings.dir/export_tmalign.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/export_tmalign.cc
[ 50%] Building CXX object modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/wrap_bindings.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_bindings_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/wrap_bindings.cc.o -MF CMakeFiles/_ost_bindings.dir/wrap_bindings.cc.o.d -o CMakeFiles/_ost_bindings.dir/wrap_bindings.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/wrap_bindings.cc
[ 50%] Building CXX object modules/db/pymod/CMakeFiles/_ost_db.dir/wrap_db.cc.o
[ 50%] Building CXX object modules/db/pymod/CMakeFiles/_ost_db.dir/export_linear_db.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_db_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/db/pymod/CMakeFiles/_ost_db.dir/export_linear_db.cc.o -MF CMakeFiles/_ost_db.dir/export_linear_db.cc.o.d -o CMakeFiles/_ost_db.dir/export_linear_db.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/db/pymod/export_linear_db.cc
[ 50%] Building CXX object modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/wrap_seq_alg.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_db_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/db/pymod/CMakeFiles/_ost_db.dir/wrap_db.cc.o -MF CMakeFiles/_ost_db.dir/wrap_db.cc.o.d -o CMakeFiles/_ost_db.dir/wrap_db.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/db/pymod/wrap_db.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_seq_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/wrap_seq_alg.cc.o -MF CMakeFiles/_ost_seq_alg.dir/wrap_seq_alg.cc.o.d -o CMakeFiles/_ost_seq_alg.dir/wrap_seq_alg.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/pymod/wrap_seq_alg.cc
[ 50%] Linking CXX shared module ../../../stage/lib/python3.12/dist-packages/ost/bindings/_ost_bindings.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_bindings.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/_ost_bindings.dir/link.d -Wl,-z,relro -shared  -o ../../../stage/lib/python3.12/dist-packages/ost/bindings/_ost_bindings.so CMakeFiles/_ost_bindings.dir/export_tmalign.cc.o CMakeFiles/_ost_bindings.dir/wrap_bindings.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_bindings.so.2.9.0 /usr/lib/x86_64-linux-gnu/libpython3.12.so /usr/lib/x86_64-linux-gnu/libboost_python312.so.1.83.0 ../../../stage/lib/libost_seq.so.2.9.0 ../../../stage/lib/libost_mol.so.2.9.0 ../../../stage/lib/libost_info.so.2.9.0 ../../../stage/lib/libost_base.so.2.9.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./__init__.pyc\",\"__init__.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/lga.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./lga.pyc\",\"lga.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/hbplus.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./hbplus.pyc\",\"hbplus.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/msms.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./msms.pyc\",\"msms.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/tmtools.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./tmtools.pyc\",\"tmtools.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/dssp.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./dssp.pyc\",\"dssp.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/clustalw.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./clustalw.pyc\",\"clustalw.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/utils.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./utils.pyc\",\"utils.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/naccess.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./naccess.pyc\",\"naccess.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/hhblits.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./hhblits.pyc\",\"hhblits.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/hhblits2.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./hhblits2.pyc\",\"hhblits2.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/hhblits3.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./hhblits3.pyc\",\"hhblits3.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/blast.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./blast.pyc\",\"blast.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/cadscore.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./cadscore.pyc\",\"cadscore.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/kclust.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./kclust.pyc\",\"kclust.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/ialign.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./ialign.pyc\",\"ialign.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/mmseqs2.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./mmseqs2.pyc\",\"mmseqs2.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod/dockq.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/bindings/./dockq.pyc\",\"dockq.py\",doraise=True)"
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 50%] Built target _ost_bindings
[ 50%] Linking CXX shared module ../../../stage/lib/python3.12/dist-packages/ost/db/_ost_db.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_db.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/_ost_db.dir/link.d -Wl,-z,relro -shared  -o ../../../stage/lib/python3.12/dist-packages/ost/db/_ost_db.so CMakeFiles/_ost_db.dir/export_linear_db.cc.o CMakeFiles/_ost_db.dir/wrap_db.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_db.so.2.9.0 /usr/lib/x86_64-linux-gnu/libpython3.12.so /usr/lib/x86_64-linux-gnu/libboost_python312.so.1.83.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_seq.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../stage/lib/libost_mol.so.2.9.0 ../../../stage/lib/libost_info.so.2.9.0 ../../../stage/lib/libost_base.so.2.9.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/db/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/db/./__init__.pyc\",\"__init__.py\",doraise=True)"
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 50%] Built target _ost_db
make  -f modules/conop/pymod/CMakeFiles/_ost_conop.dir/build.make modules/conop/pymod/CMakeFiles/_ost_conop.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/conop/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/pymod/CMakeFiles/_ost_conop.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/conop/pymod/CMakeFiles/_ost_conop.dir/build.make modules/conop/pymod/CMakeFiles/_ost_conop.dir/build
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 50%] Building CXX object modules/conop/pymod/CMakeFiles/_ost_conop.dir/wrap_conop.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/pymod/CMakeFiles/_ost_conop.dir/wrap_conop.cc.o -MF CMakeFiles/_ost_conop.dir/wrap_conop.cc.o.d -o CMakeFiles/_ost_conop.dir/wrap_conop.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/pymod/wrap_conop.cc
[ 50%] Building CXX object modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_compound.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_compound.cc.o -MF CMakeFiles/_ost_conop.dir/export_compound.cc.o.d -o CMakeFiles/_ost_conop.dir/export_compound.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/pymod/export_compound.cc
[ 50%] Building CXX object modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_processor.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_processor.cc.o -MF CMakeFiles/_ost_conop.dir/export_processor.cc.o.d -o CMakeFiles/_ost_conop.dir/export_processor.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/pymod/export_processor.cc
[ 51%] Building CXX object modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_heuristic.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_heuristic.cc.o -MF CMakeFiles/_ost_conop.dir/export_heuristic.cc.o.d -o CMakeFiles/_ost_conop.dir/export_heuristic.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/pymod/export_heuristic.cc
[ 51%] Building CXX object modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_amino_acids.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_amino_acids.cc.o -MF CMakeFiles/_ost_conop.dir/export_amino_acids.cc.o.d -o CMakeFiles/_ost_conop.dir/export_amino_acids.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/pymod/export_amino_acids.cc
[ 51%] Building CXX object modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_conop.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_conop.cc.o -MF CMakeFiles/_ost_conop.dir/export_conop.cc.o.d -o CMakeFiles/_ost_conop.dir/export_conop.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/pymod/export_conop.cc
[ 51%] Building CXX object modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_rule_based.cc.o
[ 51%] Building CXX object modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_diag.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_rule_based.cc.o -MF CMakeFiles/_ost_conop.dir/export_rule_based.cc.o.d -o CMakeFiles/_ost_conop.dir/export_rule_based.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/pymod/export_rule_based.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_diag.cc.o -MF CMakeFiles/_ost_conop.dir/export_diag.cc.o.d -o CMakeFiles/_ost_conop.dir/export_diag.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/pymod/export_diag.cc
[ 51%] Building CXX object modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_ring_finder.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_conop_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/conop/pymod/CMakeFiles/_ost_conop.dir/export_ring_finder.cc.o -MF CMakeFiles/_ost_conop.dir/export_ring_finder.cc.o.d -o CMakeFiles/_ost_conop.dir/export_ring_finder.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/pymod/export_ring_finder.cc
[ 51%] Linking CXX shared library ../../../stage/lib/libost_io.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_io.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/ost_io.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_io.so.2.9 -o ../../../stage/lib/libost_io.so.2.9.0 CMakeFiles/ost_io.dir/io_manager.cc.o CMakeFiles/ost_io.dir/convert.cc.o CMakeFiles/ost_io.dir/io_utils.cc.o CMakeFiles/ost_io.dir/mol/entity_io_crd_handler.cc.o CMakeFiles/ost_io.dir/mol/entity_io_pqr_handler.cc.o CMakeFiles/ost_io.dir/mol/entity_io_mae_handler.cc.o CMakeFiles/ost_io.dir/mol/pdb_reader.cc.o CMakeFiles/ost_io.dir/mol/entity_io_pdb_handler.cc.o CMakeFiles/ost_io.dir/mol/pdb_writer.cc.o CMakeFiles/ost_io.dir/mol/entity_io_sdf_handler.cc.o CMakeFiles/ost_io.dir/mol/entity_io_mmcif_handler.cc.o CMakeFiles/ost_io.dir/mol/sdf_reader.cc.o CMakeFiles/ost_io.dir/mol/sdf_writer.cc.o CMakeFiles/ost_io.dir/mol/save_entity.cc.o CMakeFiles/ost_io.dir/mol/load_entity.cc.o CMakeFiles/ost_io.dir/mol/surface_io_msms_handler.cc.o CMakeFiles/ost_io.dir/mol/load_surface.cc.o CMakeFiles/ost_io.dir/mol/chemdict_parser.cc.o CMakeFiles/ost_io.dir/mol/io_profile.cc.o CMakeFiles/ost_io.dir/mol/dcd_io.cc.o CMakeFiles/ost_io.dir/mol/star_parser.cc.o CMakeFiles/ost_io.dir/mol/star_writer.cc.o CMakeFiles/ost_io.dir/mol/mmcif_reader.cc.o CMakeFiles/ost_io.dir/mol/mmcif_info.cc.o CMakeFiles/ost_io.dir/mol/mmcif_writer.cc.o CMakeFiles/ost_io.dir/mol/pdb_str.cc.o CMakeFiles/ost_io.dir/mol/sdf_str.cc.o CMakeFiles/ost_io.dir/mol/mmcif_str.cc.o CMakeFiles/ost_io.dir/mol/stereochemical_params_reader.cc.o CMakeFiles/ost_io.dir/mol/omf.cc.o CMakeFiles/ost_io.dir/seq/clustal_io_handler.cc.o CMakeFiles/ost_io.dir/seq/load.cc.o CMakeFiles/ost_io.dir/seq/save.cc.o CMakeFiles/ost_io.dir/seq/fasta_io_handler.cc.o CMakeFiles/ost_io.dir/seq/pir_io_handler.cc.o CMakeFiles/ost_io.dir/seq/promod_io_handler.cc.o CMakeFiles/ost_io.dir/seq/hhm_io_handler.cc.o CMakeFiles/ost_io.dir/seq/pssm_io_handler.cc.o CMakeFiles/ost_io.dir/img/load_map.cc.o CMakeFiles/ost_io.dir/img/map_io_dx_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_spi_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_situs_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_mrc_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_dm3_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_tiff_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_dat_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_ipl_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_jpk_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_nanoscope_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_png_handler.cc.o CMakeFiles/ost_io.dir/img/map_io_df3_handler.cc.o CMakeFiles/ost_io.dir/img/image_format.cc.o CMakeFiles/ost_io.dir/img/tiff_util.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_mol_alg.so.2.9.0 ../../../stage/lib/libost_img_alg.so.2.9.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so ../../../stage/lib/libost_conop.so.2.9.0 ../../../stage/lib/libost_db.so.2.9.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_img.so.2.9.0 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../stage/lib/libost_seq_alg.so.2.9.0 ../../../stage/lib/libost_seq.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../stage/lib/libost_mol.so.2.9.0 ../../../stage/lib/libost_info.so.2.9.0 ../../../stage/lib/libost_base.so.2.9.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libparasail.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E cmake_symlink_library ../../../stage/lib/libost_io.so.2.9.0 ../../../stage/lib/libost_io.so.2.9 ../../../stage/lib/libost_io.so
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[ 51%] Generating tools/moc_tool_options_win.cpp
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make  -f modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/build.make modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_options_win.cpp_parameters
[ 51%] Generating data_viewer/moc_data_viewer_panel_base.cpp
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_argand.cpp_parameters
make  -f modules/io/tests/CMakeFiles/test_mae_standalone.dir/build.make modules/io/tests/CMakeFiles/test_mae_standalone.dir/build
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_data_viewer.cpp_parameters
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/alg/src/CMakeFiles/lddt.dir/build.make modules/mol/alg/src/CMakeFiles/lddt.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_data_viewer_panel_base.cpp_parameters
[ 52%] Generating data_viewer/moc_fft_panel.cpp
make  -f tools/molck/CMakeFiles/molck.dir/build.make tools/molck/CMakeFiles/molck.dir/build
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_fft_panel.cpp_parameters
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 52%] Building CXX object modules/conop/src/CMakeFiles/chemdict_tool.dir/chemdict_tool.cc.o
[ 52%] Generating data_viewer/moc_info_panel.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/conop/src/CMakeFiles/chemdict_tool.dir/chemdict_tool.cc.o -MF CMakeFiles/chemdict_tool.dir/chemdict_tool.cc.o.d -o CMakeFiles/chemdict_tool.dir/chemdict_tool.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/src/chemdict_tool.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_info_panel.cpp_parameters
[ 52%] Building CXX object modules/mol/alg/src/CMakeFiles/lddt.dir/lddt.cc.o
[ 52%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/forcefield.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/alg/src/CMakeFiles/lddt.dir/lddt.cc.o -MF CMakeFiles/lddt.dir/lddt.cc.o.d -o CMakeFiles/lddt.dir/lddt.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/lddt.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/forcefield.cc.o -MF CMakeFiles/ost_mol_mm.dir/forcefield.cc.o.d -o CMakeFiles/ost_mol_mm.dir/forcefield.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/forcefield.cc
[ 53%] Building CXX object tools/molck/CMakeFiles/molck.dir/main.cc.o
[ 53%] Building CXX object modules/io/tests/CMakeFiles/test_mae_standalone.dir/test_mae_standalone.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/tools/molck && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT tools/molck/CMakeFiles/molck.dir/main.cc.o -MF CMakeFiles/molck.dir/main.cc.o.d -o CMakeFiles/molck.dir/main.cc.o -c /build/reproducible-path/openstructure-2.9.0/tools/molck/main.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/test_mae_standalone.dir/test_mae_standalone.cc.o -MF CMakeFiles/test_mae_standalone.dir/test_mae_standalone.cc.o.d -o CMakeFiles/test_mae_standalone.dir/test_mae_standalone.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/tests/test_mae_standalone.cc
[ 53%] Generating data_viewer/moc_null_overlay.cpp
[ 53%] Generating data_viewer/moc_overlay_base.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_null_overlay.cpp_parameters
[ 53%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/ff_reader.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_overlay_base.cpp_parameters
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/ff_reader.cc.o -MF CMakeFiles/ost_mol_mm.dir/ff_reader.cc.o.d -o CMakeFiles/ost_mol_mm.dir/ff_reader.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/ff_reader.cc
[ 53%] Generating data_viewer/moc_overlay_manager_gui.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_overlay_manager_gui.cpp_parameters
[ 53%] Generating data_viewer/moc_pointlist_overlay_base.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_pointlist_overlay_base.cpp_parameters
[ 53%] Generating messages/moc_log_reader.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/messages && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/messages/moc_log_reader.cpp_parameters
[ 53%] Generating messages/moc_message_box_widget.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/messages && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/messages/moc_message_box_widget.cpp_parameters
[ 53%] Generating moc_dock_widget.cpp
[ 53%] Generating messages/moc_message_widget.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_dock_widget.cpp_parameters
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/messages && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/messages/moc_message_widget.cpp_parameters
[ 55%] Generating moc_file_type_dialog.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_file_type_dialog.cpp_parameters
[ 55%] Generating moc_file_browser.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_file_browser.cpp_parameters
[ 55%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/buildingblock.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/buildingblock.cc.o -MF CMakeFiles/ost_mol_mm.dir/buildingblock.cc.o.d -o CMakeFiles/ost_mol_mm.dir/buildingblock.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/buildingblock.cc
[ 55%] Generating moc_gl_canvas.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_gl_canvas.cpp_parameters
[ 55%] Generating moc_file_viewer.cpp
[ 55%] Generating moc_gl_win.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_file_viewer.cpp_parameters
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_gl_win.cpp_parameters
[ 55%] Generating moc_gosty_app.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_gosty_app.cpp_parameters
[ 55%] Generating moc_main.cpp
[ 55%] Generating moc_main_window.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_main.cpp_parameters
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_main_window.cpp_parameters
[ 55%] Generating moc_main_area.cpp
[ 55%] Generating moc_perspective.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_main_area.cpp_parameters
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_perspective.cpp_parameters
[ 55%] Generating moc_scene_menu.cpp
[ 55%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/gromacs_block_modifiers.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/gromacs_block_modifiers.cc.o -MF CMakeFiles/ost_mol_mm.dir/gromacs_block_modifiers.cc.o.d -o CMakeFiles/ost_mol_mm.dir/gromacs_block_modifiers.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/gromacs_block_modifiers.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_scene_menu.cpp_parameters
[ 55%] Generating moc_widget.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_widget.cpp_parameters
[ 56%] Generating moc_scene_selection.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_scene_selection.cpp_parameters
[ 56%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/heuristic_block_modifiers.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/heuristic_block_modifiers.cc.o -MF CMakeFiles/ost_mol_mm.dir/heuristic_block_modifiers.cc.o.d -o CMakeFiles/ost_mol_mm.dir/heuristic_block_modifiers.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/heuristic_block_modifiers.cc
[ 56%] Generating moc_widget_geom_handler.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_widget_geom_handler.cpp_parameters
[ 56%] Generating moc_widget_pool.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_widget_pool.cpp_parameters
[ 56%] Generating panels/moc_bottom_bar.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_bottom_bar.cpp_parameters
[ 56%] Generating panels/moc_button_bar.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_button_bar.cpp_parameters
[ 56%] Generating panels/moc_button_box.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_button_box.cpp_parameters
[ 57%] Generating panels/moc_drop_box.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_drop_box.cpp_parameters
[ 57%] Generating panels/moc_event_button.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_event_button.cpp_parameters
[ 57%] Generating panels/moc_panel_bar.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_panel_bar.cpp_parameters
[ 57%] Generating panels/moc_panel_bar_widget_holder.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_panel_bar_widget_holder.cpp_parameters
[ 57%] Generating panels/moc_panel_manager.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_panel_manager.cpp_parameters
[ 57%] Generating panels/moc_panel_widget_container.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_panel_widget_container.cpp_parameters
[ 57%] Generating panels/moc_side_bar.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_side_bar.cpp_parameters
[ 57%] Generating panels/moc_splitter_panel_bar.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_splitter_panel_bar.cpp_parameters
[ 57%] Generating panels/moc_tabbed_panel_bar.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_tabbed_panel_bar.cpp_parameters
[ 57%] Generating python_shell/moc_completer_base.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_completer_base.cpp_parameters
[ 57%] Generating python_shell/moc_gutter.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_gutter.cpp_parameters
[ 57%] Generating python_shell/moc_main_thread_runner.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_main_thread_runner.cpp_parameters
[ 57%] Generating python_shell/moc_output_redirector.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_output_redirector.cpp_parameters
[ 57%] Generating python_shell/moc_path_completer.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_path_completer.cpp_parameters
[ 58%] Generating python_shell/moc_python_interpreter.cpp
[ 58%] Generating python_shell/moc_python_completer.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_interpreter.cpp_parameters
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_completer.cpp_parameters
[ 58%] Generating python_shell/moc_python_interpreter_worker.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_interpreter_worker.cpp_parameters
[ 58%] Generating python_shell/moc_python_namespace_tree_model.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_namespace_tree_model.cpp_parameters
[ 58%] Generating python_shell/moc_python_shell.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_shell.cpp_parameters
[ 58%] Generating python_shell/moc_python_shell_widget.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_shell_widget.cpp_parameters
[ 58%] Generating python_shell/moc_state.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_state.cpp_parameters
[ 58%] Generating python_shell/moc_state_machine.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_state_machine.cpp_parameters
[ 58%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/interaction.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/interaction.cc.o -MF CMakeFiles/ost_mol_mm.dir/interaction.cc.o.d -o CMakeFiles/ost_mol_mm.dir/interaction.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/interaction.cc
[ 58%] Generating python_shell/moc_text_logger.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_text_logger.cpp_parameters
[ 58%] Generating python_shell/moc_transition.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_transition.cpp_parameters
[ 60%] Generating scene_win/moc_context_menu.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_context_menu.cpp_parameters
[ 60%] Generating python_shell/moc_transition_guard.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_transition_guard.cpp_parameters
[ 60%] Generating scene_win/moc_current_selection_node.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_current_selection_node.cpp_parameters
[ 60%] Generating scene_win/moc_custom_part_node.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_custom_part_node.cpp_parameters
[ 60%] Generating scene_win/moc_entity_node.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_entity_node.cpp_parameters
[ 60%] Generating scene_win/moc_entity_part_node.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_entity_part_node.cpp_parameters
[ 61%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/simulation.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/simulation.cc.o -MF CMakeFiles/ost_mol_mm.dir/simulation.cc.o.d -o CMakeFiles/ost_mol_mm.dir/simulation.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/simulation.cc
[ 61%] Generating scene_win/moc_gfx_scene_node.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_gfx_scene_node.cpp_parameters
[ 61%] Generating scene_win/moc_label_node.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_label_node.cpp_parameters
[ 61%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/modeller.cc.o
[ 61%] Generating scene_win/moc_render_mode_node.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/modeller.cc.o -MF CMakeFiles/ost_mol_mm.dir/modeller.cc.o.d -o CMakeFiles/ost_mol_mm.dir/modeller.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/modeller.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_render_mode_node.cpp_parameters
[ 61%] Generating scene_win/moc_render_modes_node.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_render_modes_node.cpp_parameters
[ 61%] Generating scene_win/moc_root_node.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_root_node.cpp_parameters
[ 61%] Generating scene_win/moc_scene_node.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_scene_node.cpp_parameters
[ 62%] Generating scene_win/moc_scene_win.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_scene_win.cpp_parameters
[ 62%] Generating scene_win/moc_scene_win_model.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_scene_win_model.cpp_parameters
[ 62%] Generating sequence_viewer/moc_align_properties_painter.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_align_properties_painter.cpp_parameters
[ 62%] Generating sequence_viewer/moc_alignment_view_object.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_alignment_view_object.cpp_parameters
[ 62%] Generating sequence_viewer/moc_background_painter.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_background_painter.cpp_parameters
[ 62%] Generating sequence_viewer/moc_base_row.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_base_row.cpp_parameters
/build/reproducible-path/openstructure-2.9.0/modules/conop/src/chemdict_tool.cc: In function 'int main(int, const char**)':
/build/reproducible-path/openstructure-2.9.0/modules/conop/src/chemdict_tool.cc:96:57: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations]
   96 |   if (boost::iequals(".gz", boost::filesystem::extension(argv[2]))) {
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/modules/conop/src/chemdict_tool.cc:27:
/usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here
   29 | inline std::string extension(const path& p)
      |                    ^~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/lddt.cc: In function 'ost::conop::CompoundLibPtr load_compound_lib(const String&)':
/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/lddt.cc:138:48: warning: 'boost::filesystem::path boost::filesystem::path::branch_path() const' is deprecated: Use path::parent_path() instead [-Wdeprecated-declarations]
  138 |     fs::path path_only=path_and_exe.branch_path();
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~^~
In file included from /usr/include/boost/filesystem/fstream.hpp:17,
                 from /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/lddt.cc:26:
/usr/include/boost/filesystem/path.hpp:1129:10: note: declared here
 1129 |     path branch_path() const { return parent_path(); }
      |          ^~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/lddt.cc:139:48: warning: 'boost::filesystem::path boost::filesystem::path::branch_path() const' is deprecated: Use path::parent_path() instead [-Wdeprecated-declarations]
  139 |     fs::path share_path = path_only.branch_path();
      |                           ~~~~~~~~~~~~~~~~~~~~~^~
/usr/include/boost/filesystem/path.hpp:1129:10: note: declared here
 1129 |     path branch_path() const { return parent_path(); }
      |          ^~~~~~~~~~~
[ 62%] Generating sequence_viewer/moc_base_view_object.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_base_view_object.cpp_parameters
[ 62%] Generating sequence_viewer/moc_conservation_painter.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_conservation_painter.cpp_parameters
[ 63%] Generating sequence_viewer/moc_painter.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_painter.cpp_parameters
[ 63%] Generating sequence_viewer/moc_secstr_row.cpp
[ 63%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/state_extractor.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_secstr_row.cpp_parameters
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/state_extractor.cc.o -MF CMakeFiles/ost_mol_mm.dir/state_extractor.cc.o.d -o CMakeFiles/ost_mol_mm.dir/state_extractor.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/state_extractor.cc
[ 63%] Generating sequence_viewer/moc_seq_secstr_painter.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_seq_secstr_painter.cpp_parameters
/build/reproducible-path/openstructure-2.9.0/tools/molck/main.cc: In function 'ost::conop::CompoundLibPtr load_compound_lib(const String&)':
/build/reproducible-path/openstructure-2.9.0/tools/molck/main.cc:119:48: warning: 'boost::filesystem::path boost::filesystem::path::branch_path() const' is deprecated: Use path::parent_path() instead [-Wdeprecated-declarations]
  119 |     fs::path path_only=path_and_exe.branch_path();
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~^~
In file included from /build/reproducible-path/openstructure-2.9.0/tools/molck/main.cc:3:
/usr/include/boost/filesystem/path.hpp:1129:10: note: declared here
 1129 |     path branch_path() const { return parent_path(); }
      |          ^~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/tools/molck/main.cc:120:48: warning: 'boost::filesystem::path boost::filesystem::path::branch_path() const' is deprecated: Use path::parent_path() instead [-Wdeprecated-declarations]
  120 |     fs::path share_path = path_only.branch_path();
      |                           ~~~~~~~~~~~~~~~~~~~~~^~
/usr/include/boost/filesystem/path.hpp:1129:10: note: declared here
 1129 |     path branch_path() const { return parent_path(); }
      |          ^~~~~~~~~~~
[ 63%] Generating sequence_viewer/moc_seq_selection_painter.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_seq_selection_painter.cpp_parameters
[ 63%] Linking CXX executable ../../../stage/bin/test_mae_standalone
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_mae_standalone.dir/link.txt --verbose=1
[ 63%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/observer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/observer.cc.o -MF CMakeFiles/ost_mol_mm.dir/observer.cc.o.d -o CMakeFiles/ost_mol_mm.dir/observer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/observer.cc
[ 63%] Generating sequence_viewer/moc_seq_text_painter.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_seq_text_painter.cpp_parameters
[ 63%] Generating sequence_viewer/moc_sequence_delegate.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_delegate.cpp_parameters
[ 63%] Generating sequence_viewer/moc_sequence_model.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_model.cpp_parameters
[ 63%] Generating sequence_viewer/moc_sequence_row.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_row.cpp_parameters
[ 63%] Generating sequence_viewer/moc_sequence_search_bar.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_search_bar.cpp_parameters
[ 63%] Generating sequence_viewer/moc_sequence_table_view.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_table_view.cpp_parameters
[ 63%] Generating sequence_viewer/moc_sequence_view_object.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_view_object.cpp_parameters
[ 63%] Generating sequence_viewer/moc_sequence_viewer.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_viewer.cpp_parameters
[ 65%] Generating sequence_viewer/moc_tick_painter.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_tick_painter.cpp_parameters
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file,CMakeFiles/test_mae_standalone.dir/link.d CMakeFiles/test_mae_standalone.dir/test_mae_standalone.cc.o -o ../../../stage/bin/test_mae_standalone   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib ../../../stage/lib/libost_io.so.2.9.0 ../../../stage/lib/libost_mol_alg.so.2.9.0 ../../../stage/lib/libost_conop.so.2.9.0 ../../../stage/lib/libost_db.so.2.9.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../stage/lib/libost_seq_alg.so.2.9.0 ../../../stage/lib/libost_seq.so.2.9.0 ../../../stage/lib/libost_mol.so.2.9.0 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../stage/lib/libost_img_alg.so.2.9.0 ../../../stage/lib/libost_img.so.2.9.0 ../../../stage/lib/libost_info.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 ../../../stage/lib/libost_base.so.2.9.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 65%] Built target test_mae_standalone
[ 65%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/system_creator.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/system_creator.cc.o -MF CMakeFiles/ost_mol_mm.dir/system_creator.cc.o.d -o CMakeFiles/ost_mol_mm.dir/system_creator.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/system_creator.cc
[ 65%] Generating sequence_viewer/moc_title_row.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_title_row.cpp_parameters
[ 65%] Generating tools/moc_measure_tool.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_measure_tool.cpp_parameters
[ 65%] Generating tools/moc_tool.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool.cpp_parameters
[ 65%] Generating tools/moc_tool_bar.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_bar.cpp_parameters
[ 65%] Generating tools/moc_tool_manager.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_manager.cpp_parameters
[ 65%] Generating tools/moc_tool_option.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_option.cpp_parameters
[ 65%] Generating tools/moc_tool_option_group.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_option_group.cpp_parameters
[ 65%] Generating tools/moc_tool_options.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_options.cpp_parameters
[ 65%] Generating tools/moc_tool_options_widget.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_options_widget.cpp_parameters
[ 65%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/topology_creator.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/topology_creator.cc.o -MF CMakeFiles/ost_mol_mm.dir/topology_creator.cc.o.d -o CMakeFiles/ost_mol_mm.dir/topology_creator.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/topology_creator.cc
[ 65%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/topology.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/topology.cc.o -MF CMakeFiles/ost_mol_mm.dir/topology.cc.o.d -o CMakeFiles/ost_mol_mm.dir/topology.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/topology.cc
[ 65%] Building CXX object modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/steep.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_MOL_MM -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/steep.cc.o -MF CMakeFiles/ost_mol_mm.dir/steep.cc.o.d -o CMakeFiles/ost_mol_mm.dir/steep.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/steep.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/gui/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/CMakeFiles/ost_gui.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/gui/src/CMakeFiles/ost_gui.dir/build.make modules/gui/src/CMakeFiles/ost_gui.dir/build
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 65%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_file_type_dialog.cpp.o
[ 65%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_file_browser.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_file_type_dialog.cpp.o -MF CMakeFiles/ost_gui.dir/moc_file_type_dialog.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_file_type_dialog.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_file_type_dialog.cpp
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_file_browser.cpp.o -MF CMakeFiles/ost_gui.dir/moc_file_browser.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_file_browser.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_file_browser.cpp
[ 65%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_file_viewer.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_file_viewer.cpp.o -MF CMakeFiles/ost_gui.dir/moc_file_viewer.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_file_viewer.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_file_viewer.cpp
[ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_gl_canvas.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_gl_canvas.cpp.o -MF CMakeFiles/ost_gui.dir/moc_gl_canvas.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_gl_canvas.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_gl_canvas.cpp
[ 66%] Linking CXX executable ../../../stage/bin/chemdict_tool
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdict_tool.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file,CMakeFiles/chemdict_tool.dir/link.d CMakeFiles/chemdict_tool.dir/chemdict_tool.cc.o -o ../../../stage/bin/chemdict_tool   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_io.so.2.9.0 ../../../stage/lib/libost_mol_alg.so.2.9.0 ../../../stage/lib/libost_conop.so.2.9.0 ../../../stage/lib/libost_db.so.2.9.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../stage/lib/libost_seq_alg.so.2.9.0 ../../../stage/lib/libost_seq.so.2.9.0 ../../../stage/lib/libost_mol.so.2.9.0 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../stage/lib/libost_img_alg.so.2.9.0 ../../../stage/lib/libost_img.so.2.9.0 ../../../stage/lib/libost_info.so.2.9.0 ../../../stage/lib/libost_base.so.2.9.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 66%] Built target chemdict_tool
[ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_gl_win.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_gl_win.cpp.o -MF CMakeFiles/ost_gui.dir/moc_gl_win.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_gl_win.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_gl_win.cpp
[ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_scene_menu.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_scene_menu.cpp.o -MF CMakeFiles/ost_gui.dir/moc_scene_menu.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_scene_menu.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_scene_menu.cpp
[ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_gosty_app.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_gosty_app.cpp.o -MF CMakeFiles/ost_gui.dir/moc_gosty_app.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_gosty_app.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_gosty_app.cpp
[ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_main.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_main.cpp.o -MF CMakeFiles/ost_gui.dir/moc_main.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_main.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_main.cpp
[ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_main_area.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_main_area.cpp.o -MF CMakeFiles/ost_gui.dir/moc_main_area.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_main_area.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_main_area.cpp
[ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_perspective.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_perspective.cpp.o -MF CMakeFiles/ost_gui.dir/moc_perspective.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_perspective.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_perspective.cpp
[ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_dock_widget.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_dock_widget.cpp.o -MF CMakeFiles/ost_gui.dir/moc_dock_widget.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_dock_widget.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_dock_widget.cpp
[ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_main_window.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_main_window.cpp.o -MF CMakeFiles/ost_gui.dir/moc_main_window.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_main_window.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_main_window.cpp
[ 66%] Linking CXX executable ../../../../stage/bin/lddt
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/lddt.dir/link.txt --verbose=1
[ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_scene_selection.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_scene_selection.cpp.o -MF CMakeFiles/ost_gui.dir/moc_scene_selection.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_scene_selection.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_scene_selection.cpp
[ 66%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_widget.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_widget.cpp.o -MF CMakeFiles/ost_gui.dir/moc_widget.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_widget.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_widget.cpp
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file,CMakeFiles/lddt.dir/link.d CMakeFiles/lddt.dir/lddt.cc.o -o ../../../../stage/bin/lddt   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_io.so.2.9.0 ../../../../stage/lib/libost_mol_alg.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../../stage/lib/libost_seq_alg.so.2.9.0 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../../stage/lib/libost_img_alg.so.2.9.0 ../../../../stage/lib/libost_img.so.2.9.0 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so ../../../../stage/lib/libost_conop.so.2.9.0 ../../../../stage/lib/libost_db.so.2.9.0 ../../../../stage/lib/libost_seq.so.2.9.0 ../../../../stage/lib/libost_mol.so.2.9.0 ../../../../stage/lib/libost_info.so.2.9.0 ../../../../stage/lib/libost_base.so.2.9.0 ../../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libsqlite3.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 66%] Built target lddt
[ 67%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_widget_geom_handler.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_widget_geom_handler.cpp.o -MF CMakeFiles/ost_gui.dir/moc_widget_geom_handler.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_widget_geom_handler.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_widget_geom_handler.cpp
[ 67%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/moc_widget_pool.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/moc_widget_pool.cpp.o -MF CMakeFiles/ost_gui.dir/moc_widget_pool.cpp.o.d -o CMakeFiles/ost_gui.dir/moc_widget_pool.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_widget_pool.cpp
[ 67%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/messages/moc_message_widget.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/messages/moc_message_widget.cpp.o -MF CMakeFiles/ost_gui.dir/messages/moc_message_widget.cpp.o.d -o CMakeFiles/ost_gui.dir/messages/moc_message_widget.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/messages/moc_message_widget.cpp
[ 67%] Linking CXX executable ../../stage/bin/molck
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/tools/molck && /usr/bin/cmake -E cmake_link_script CMakeFiles/molck.dir/link.txt --verbose=1
[ 67%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/messages/moc_message_box_widget.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/messages/moc_message_box_widget.cpp.o -MF CMakeFiles/ost_gui.dir/messages/moc_message_box_widget.cpp.o.d -o CMakeFiles/ost_gui.dir/messages/moc_message_box_widget.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/messages/moc_message_box_widget.cpp
[ 67%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/messages/moc_log_reader.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/messages/moc_log_reader.cpp.o -MF CMakeFiles/ost_gui.dir/messages/moc_log_reader.cpp.o.d -o CMakeFiles/ost_gui.dir/messages/moc_log_reader.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/messages/moc_log_reader.cpp
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file,CMakeFiles/molck.dir/link.d CMakeFiles/molck.dir/main.cc.o -o ../../stage/bin/molck   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../stage/lib/libost_io.so.2.9.0 ../../stage/lib/libost_mol_alg.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../stage/lib/libost_seq_alg.so.2.9.0 /usr/lib/x86_64-linux-gnu/libparasail.so ../../stage/lib/libost_conop.so.2.9.0 ../../stage/lib/libost_db.so.2.9.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../stage/lib/libost_seq.so.2.9.0 ../../stage/lib/libost_mol.so.2.9.0 ../../stage/lib/libost_img_alg.so.2.9.0 ../../stage/lib/libost_img.so.2.9.0 ../../stage/lib/libost_info.so.2.9.0 ../../stage/lib/libost_base.so.2.9.0 ../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 67%] Built target molck
[ 67%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_align_properties_painter.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_align_properties_painter.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_align_properties_painter.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_align_properties_painter.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_align_properties_painter.cpp
[ 67%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_background_painter.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_background_painter.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_background_painter.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_background_painter.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_background_painter.cpp
[ 67%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_base_row.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_base_row.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_base_row.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_base_row.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_base_row.cpp
[ 67%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_conservation_painter.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_conservation_painter.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_conservation_painter.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_conservation_painter.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_conservation_painter.cpp
[ 68%] Linking CXX shared module ../../../../stage/lib/python3.12/dist-packages/ost/seq/alg/_ost_seq_alg.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_seq_alg.dir/link.txt --verbose=1
[ 68%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_painter.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_painter.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_painter.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_painter.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_painter.cpp
[ 68%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_secstr_row.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_secstr_row.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_secstr_row.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_secstr_row.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_secstr_row.cpp
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/_ost_seq_alg.dir/link.d -Wl,-z,relro -shared  -o ../../../../stage/lib/python3.12/dist-packages/ost/seq/alg/_ost_seq_alg.so CMakeFiles/_ost_seq_alg.dir/wrap_seq_alg.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_seq_alg.so.2.9.0 /usr/lib/x86_64-linux-gnu/libpython3.12.so /usr/lib/x86_64-linux-gnu/libboost_python312.so.1.83.0 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../../stage/lib/libost_seq.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../../stage/lib/libost_mol.so.2.9.0 ../../../../stage/lib/libost_info.so.2.9.0 ../../../../stage/lib/libost_base.so.2.9.0 ../../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/seq/alg/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/seq/alg/./__init__.pyc\",\"__init__.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/seq/alg/pymod/mat.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/seq/alg/./mat.pyc\",\"mat.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/seq/alg/pymod/renumber.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/seq/alg/./renumber.pyc\",\"renumber.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/seq/alg/pymod/aaindex.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/seq/alg/./aaindex.pyc\",\"aaindex.py\",doraise=True)"
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 68%] Built target _ost_seq_alg
[ 70%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_secstr_painter.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_secstr_painter.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_secstr_painter.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_secstr_painter.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_seq_secstr_painter.cpp
[ 70%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_selection_painter.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_selection_painter.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_selection_painter.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_selection_painter.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_seq_selection_painter.cpp
[ 70%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_text_painter.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_text_painter.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_text_painter.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_seq_text_painter.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_seq_text_painter.cpp
[ 70%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_delegate.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_delegate.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_delegate.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_delegate.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_delegate.cpp
[ 70%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_model.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_model.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_model.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_model.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_model.cpp
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/../../../../modules/gui/src/main.hh:28,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_main.cpp:10:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/../../../../modules/gui/src/widget_state_saver.hh: In instantiation of 'ost::gui::WidgetStateSaver<BASE>::~WidgetStateSaver() [with BASE = QMainWindow]':
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/../../../../modules/gui/src/main.hh:40:25:   required from here
   40 | class DLLEXPORT_OST_GUI GostyMainWindow : public WidgetStateSaver<QMainWindow>
      |                         ^~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/../../../../modules/gui/src/widget_state_saver.hh:323:8: warning: the address of 'ost::gui::WidgetStateSaver<QMainWindow>::QMainWindow' will never be NULL [-Waddress]
  323 |     if(dynamic_cast<QMainWindow* >(this)){
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/../../../../modules/gui/src/widget_state_saver.hh:263:7: note: 'ost::gui::WidgetStateSaver<QMainWindow>::QMainWindow' declared here
  263 | class WidgetStateSaver<BASE>: public BASE
      |       ^~~~~~~~~~~~~~~~~~~~~~
[ 70%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_row.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_row.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_row.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_row.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_row.cpp
[ 70%] Linking CXX shared module ../../../stage/lib/python3.12/dist-packages/ost/conop/_ost_conop.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_conop.dir/link.txt --verbose=1
[ 70%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_search_bar.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_search_bar.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_search_bar.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_search_bar.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_search_bar.cpp
[ 70%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_table_view.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_table_view.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_table_view.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_table_view.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_table_view.cpp
[ 70%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_viewer.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_viewer.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_viewer.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_viewer.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_viewer.cpp
[ 70%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_tick_painter.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_tick_painter.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_tick_painter.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_tick_painter.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_tick_painter.cpp
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/_ost_conop.dir/link.d -Wl,-z,relro -shared  -o ../../../stage/lib/python3.12/dist-packages/ost/conop/_ost_conop.so CMakeFiles/_ost_conop.dir/wrap_conop.cc.o CMakeFiles/_ost_conop.dir/export_compound.cc.o CMakeFiles/_ost_conop.dir/export_processor.cc.o CMakeFiles/_ost_conop.dir/export_heuristic.cc.o CMakeFiles/_ost_conop.dir/export_amino_acids.cc.o CMakeFiles/_ost_conop.dir/export_conop.cc.o CMakeFiles/_ost_conop.dir/export_diag.cc.o CMakeFiles/_ost_conop.dir/export_rule_based.cc.o CMakeFiles/_ost_conop.dir/export_ring_finder.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_conop.so.2.9.0 /usr/lib/x86_64-linux-gnu/libpython3.12.so /usr/lib/x86_64-linux-gnu/libboost_python312.so.1.83.0 ../../../stage/lib/libost_db.so.2.9.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_seq.so.2.9.0 ../../../stage/lib/libost_mol.so.2.9.0 ../../../stage/lib/libost_info.so.2.9.0 ../../../stage/lib/libost_base.so.2.9.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/conop/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/conop/./__init__.pyc\",\"__init__.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/conop/pymod/cleanup.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/conop/./cleanup.pyc\",\"cleanup.py\",doraise=True)"
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 70%] Built target _ost_conop
make  -f modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/build.make modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 70%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_title_row.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_title_row.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_title_row.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_title_row.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_title_row.cpp
[ 70%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/wrap_gfx.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/wrap_gfx.cc.o -MF CMakeFiles/_ost_gfx.dir/wrap_gfx.cc.o.d -o CMakeFiles/_ost_gfx.dir/wrap_gfx.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/wrap_gfx.cc
make  -f modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/build.make modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
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[ 70%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/wrap_mol_alg.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/wrap_mol_alg.cc.o -MF CMakeFiles/_ost_mol_alg.dir/wrap_mol_alg.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/wrap_mol_alg.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/wrap_mol_alg.cc
[ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_alignment_view_object.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_alignment_view_object.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_alignment_view_object.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_alignment_view_object.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_alignment_view_object.cpp
[ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_base_view_object.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_base_view_object.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_base_view_object.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_base_view_object.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_base_view_object.cpp
[ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_view_object.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_view_object.cpp.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_view_object.cpp.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/moc_sequence_view_object.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_view_object.cpp
[ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_main_thread_runner.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_main_thread_runner.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_main_thread_runner.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_main_thread_runner.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_main_thread_runner.cpp
[ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_completer_base.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_completer_base.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_completer_base.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_completer_base.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_completer_base.cpp
[ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_gutter.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_gutter.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_gutter.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_gutter.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_gutter.cpp
[ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_output_redirector.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_output_redirector.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_output_redirector.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_output_redirector.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_output_redirector.cpp
[ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_path_completer.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_path_completer.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_path_completer.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_path_completer.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_path_completer.cpp
[ 71%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_svd_superpose.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_svd_superpose.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_svd_superpose.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_svd_superpose.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/export_svd_superpose.cc
[ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_completer.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_completer.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_python_completer.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_python_completer.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_completer.cpp
[ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_interpreter.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_interpreter.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_python_interpreter.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_python_interpreter.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_interpreter.cpp
[ 71%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_interpreter_worker.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_interpreter_worker.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_python_interpreter_worker.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_python_interpreter_worker.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_interpreter_worker.cpp
[ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_namespace_tree_model.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_namespace_tree_model.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_python_namespace_tree_model.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_python_namespace_tree_model.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_namespace_tree_model.cpp
[ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_shell.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_shell.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_python_shell.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_python_shell.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_shell.cpp
[ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_shell_widget.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_python_shell_widget.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_python_shell_widget.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_python_shell_widget.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_python_shell_widget.cpp
[ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_text_logger.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_text_logger.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_text_logger.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_text_logger.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_text_logger.cpp
[ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_state_machine.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_state_machine.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_state_machine.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_state_machine.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_state_machine.cpp
[ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_state.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_state.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_state.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_state.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_state.cpp
[ 72%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_clash.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_clash.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_clash.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_clash.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/export_clash.cc
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/../../../../../modules/gui/src/sequence_viewer/sequence_view_object.hh:30,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/sequence_viewer/moc_sequence_view_object.cpp:10:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=]
   55 |   virtual void DeepSwap(GfxNode& n);
      |                ^~~~~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note:   by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)'
   58 |   virtual void DeepSwap(GfxObj& go);
      |                ^~~~~~~~
[ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_transition.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_transition.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_transition.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_transition.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_transition.cpp
[ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_transition_guard.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/moc_transition_guard.cpp.o -MF CMakeFiles/ost_gui.dir/python_shell/moc_transition_guard.cpp.o.d -o CMakeFiles/ost_gui.dir/python_shell/moc_transition_guard.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/python_shell/moc_transition_guard.cpp
[ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_button_bar.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_button_bar.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_button_bar.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_button_bar.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_button_bar.cpp
[ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_drop_box.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_drop_box.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_drop_box.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_drop_box.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_drop_box.cpp
[ 72%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_panel_bar.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_panel_bar.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_panel_bar.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_panel_bar.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_panel_bar.cpp
[ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_panel_manager.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_panel_manager.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_panel_manager.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_panel_manager.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_panel_manager.cpp
[ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_bottom_bar.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_bottom_bar.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_bottom_bar.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_bottom_bar.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_bottom_bar.cpp
[ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_button_box.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_button_box.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_button_box.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_button_box.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_button_box.cpp
[ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_event_button.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_event_button.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_event_button.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_event_button.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_event_button.cpp
[ 73%] Linking CXX shared library ../../../../stage/lib/libost_mol_mm.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/AMBER03.dat /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/forcefields/AMBER03.dat
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/CHARMM27.dat /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/forcefields/CHARMM27.dat
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_mol_mm.dir/link.txt --verbose=1
[ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_panel_widget_container.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_panel_widget_container.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_panel_widget_container.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_panel_widget_container.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_panel_widget_container.cpp
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/ost_mol_mm.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libost_mol_mm.so.2.9 -o ../../../../stage/lib/libost_mol_mm.so.2.9.0 CMakeFiles/ost_mol_mm.dir/forcefield.cc.o CMakeFiles/ost_mol_mm.dir/ff_reader.cc.o CMakeFiles/ost_mol_mm.dir/buildingblock.cc.o CMakeFiles/ost_mol_mm.dir/gromacs_block_modifiers.cc.o CMakeFiles/ost_mol_mm.dir/heuristic_block_modifiers.cc.o CMakeFiles/ost_mol_mm.dir/interaction.cc.o CMakeFiles/ost_mol_mm.dir/simulation.cc.o CMakeFiles/ost_mol_mm.dir/modeller.cc.o CMakeFiles/ost_mol_mm.dir/state_extractor.cc.o CMakeFiles/ost_mol_mm.dir/observer.cc.o CMakeFiles/ost_mol_mm.dir/system_creator.cc.o CMakeFiles/ost_mol_mm.dir/topology_creator.cc.o CMakeFiles/ost_mol_mm.dir/topology.cc.o CMakeFiles/ost_mol_mm.dir/steep.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_io.so.2.9.0 /usr/lib/x86_64-linux-gnu/libOpenMM.so ../../../../stage/lib/libost_mol_alg.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 ../../../../stage/lib/libost_conop.so.2.9.0 ../../../../stage/lib/libost_db.so.2.9.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../../stage/lib/libost_seq_alg.so.2.9.0 ../../../../stage/lib/libost_seq.so.2.9.0 ../../../../stage/lib/libost_mol.so.2.9.0 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../../stage/lib/libost_img_alg.so.2.9.0 ../../../../stage/lib/libost_img.so.2.9.0 ../../../../stage/lib/libost_info.so.2.9.0 ../../../../stage/lib/libost_base.so.2.9.0 ../../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E cmake_symlink_library ../../../../stage/lib/libost_mol_mm.so.2.9.0 ../../../../stage/lib/libost_mol_mm.so.2.9 ../../../../stage/lib/libost_mol_mm.so
[ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_panel_bar_widget_holder.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_panel_bar_widget_holder.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_panel_bar_widget_holder.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_panel_bar_widget_holder.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_panel_bar_widget_holder.cpp
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 73%] Built target ost_mol_mm
[ 73%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_trajectory_analysis.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_trajectory_analysis.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_trajectory_analysis.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_trajectory_analysis.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/export_trajectory_analysis.cc
[ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_side_bar.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_side_bar.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_side_bar.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_side_bar.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_side_bar.cpp
[ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_splitter_panel_bar.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_splitter_panel_bar.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_splitter_panel_bar.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_splitter_panel_bar.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_splitter_panel_bar.cpp
[ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_tabbed_panel_bar.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/moc_tabbed_panel_bar.cpp.o -MF CMakeFiles/ost_gui.dir/panels/moc_tabbed_panel_bar.cpp.o.d -o CMakeFiles/ost_gui.dir/panels/moc_tabbed_panel_bar.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/panels/moc_tabbed_panel_bar.cpp
[ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_context_menu.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_context_menu.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_context_menu.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_context_menu.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_context_menu.cpp
[ 73%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_current_selection_node.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_current_selection_node.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_current_selection_node.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_current_selection_node.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_current_selection_node.cpp
[ 73%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_scene.cc.o
[ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_custom_part_node.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_scene.cc.o -MF CMakeFiles/_ost_gfx.dir/export_scene.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_scene.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/export_scene.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_custom_part_node.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_custom_part_node.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_custom_part_node.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_custom_part_node.cpp
[ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_gfx_scene_node.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_gfx_scene_node.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_gfx_scene_node.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_gfx_scene_node.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_gfx_scene_node.cpp
[ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_label_node.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_label_node.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_label_node.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_label_node.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_label_node.cpp
[ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_entity_node.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_entity_node.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_entity_node.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_entity_node.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_entity_node.cpp
[ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_entity_part_node.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_entity_part_node.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_entity_part_node.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_entity_part_node.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_entity_part_node.cpp
[ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_render_mode_node.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_render_mode_node.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_render_mode_node.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_render_mode_node.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_render_mode_node.cpp
[ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_render_modes_node.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_render_modes_node.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_render_modes_node.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_render_modes_node.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_render_modes_node.cpp
[ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_root_node.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_root_node.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_root_node.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_root_node.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_root_node.cpp
[ 75%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_structure_analysis.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_structure_analysis.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_structure_analysis.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_structure_analysis.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/export_structure_analysis.cc
[ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_scene_node.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_scene_node.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_scene_node.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_scene_node.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_scene_node.cpp
[ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_scene_win.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_scene_win.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_scene_win.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_scene_win.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_scene_win.cpp
[ 75%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_scene_win_model.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/moc_scene_win_model.cpp.o -MF CMakeFiles/ost_gui.dir/scene_win/moc_scene_win_model.cpp.o.d -o CMakeFiles/ost_gui.dir/scene_win/moc_scene_win_model.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_scene_win_model.cpp
[ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool.cpp.o -MF CMakeFiles/ost_gui.dir/tools/moc_tool.cpp.o.d -o CMakeFiles/ost_gui.dir/tools/moc_tool.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool.cpp
[ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_option_group.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_option_group.cpp.o -MF CMakeFiles/ost_gui.dir/tools/moc_tool_option_group.cpp.o.d -o CMakeFiles/ost_gui.dir/tools/moc_tool_option_group.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_option_group.cpp
[ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_options.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_options.cpp.o -MF CMakeFiles/ost_gui.dir/tools/moc_tool_options.cpp.o.d -o CMakeFiles/ost_gui.dir/tools/moc_tool_options.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_options.cpp
[ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_bar.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_bar.cpp.o -MF CMakeFiles/ost_gui.dir/tools/moc_tool_bar.cpp.o.d -o CMakeFiles/ost_gui.dir/tools/moc_tool_bar.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_bar.cpp
[ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_option.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_option.cpp.o -MF CMakeFiles/ost_gui.dir/tools/moc_tool_option.cpp.o.d -o CMakeFiles/ost_gui.dir/tools/moc_tool_option.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_option.cpp
[ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_manager.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_manager.cpp.o -MF CMakeFiles/ost_gui.dir/tools/moc_tool_manager.cpp.o.d -o CMakeFiles/ost_gui.dir/tools/moc_tool_manager.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_manager.cpp
[ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_options_widget.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_options_widget.cpp.o -MF CMakeFiles/ost_gui.dir/tools/moc_tool_options_widget.cpp.o.d -o CMakeFiles/ost_gui.dir/tools/moc_tool_options_widget.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_options_widget.cpp
[ 76%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_contact_overlap.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_contact_overlap.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_contact_overlap.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_contact_overlap.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/export_contact_overlap.cc
[ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_measure_tool.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_measure_tool.cpp.o -MF CMakeFiles/ost_gui.dir/tools/moc_measure_tool.cpp.o.d -o CMakeFiles/ost_gui.dir/tools/moc_measure_tool.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_measure_tool.cpp
[ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_options_win.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/moc_tool_options_win.cpp.o -MF CMakeFiles/ost_gui.dir/tools/moc_tool_options_win.cpp.o.d -o CMakeFiles/ost_gui.dir/tools/moc_tool_options_win.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/tools/moc_tool_options_win.cpp
[ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_argand.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_argand.cpp.o -MF CMakeFiles/ost_gui.dir/data_viewer/moc_argand.cpp.o.d -o CMakeFiles/ost_gui.dir/data_viewer/moc_argand.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_argand.cpp
[ 76%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_fft_panel.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_fft_panel.cpp.o -MF CMakeFiles/ost_gui.dir/data_viewer/moc_fft_panel.cpp.o.d -o CMakeFiles/ost_gui.dir/data_viewer/moc_fft_panel.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_fft_panel.cpp
[ 77%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_info_panel.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_info_panel.cpp.o -MF CMakeFiles/ost_gui.dir/data_viewer/moc_info_panel.cpp.o.d -o CMakeFiles/ost_gui.dir/data_viewer/moc_info_panel.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_info_panel.cpp
[ 77%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_data_viewer.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_data_viewer.cpp.o -MF CMakeFiles/ost_gui.dir/data_viewer/moc_data_viewer.cpp.o.d -o CMakeFiles/ost_gui.dir/data_viewer/moc_data_viewer.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_data_viewer.cpp
[ 77%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_overlay_manager_gui.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_overlay_manager_gui.cpp.o -MF CMakeFiles/ost_gui.dir/data_viewer/moc_overlay_manager_gui.cpp.o.d -o CMakeFiles/ost_gui.dir/data_viewer/moc_overlay_manager_gui.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_overlay_manager_gui.cpp
[ 77%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_data_viewer_panel_base.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_data_viewer_panel_base.cpp.o -MF CMakeFiles/ost_gui.dir/data_viewer/moc_data_viewer_panel_base.cpp.o.d -o CMakeFiles/ost_gui.dir/data_viewer/moc_data_viewer_panel_base.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_data_viewer_panel_base.cpp
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/../../../../../modules/gui/src/scene_win/entity_node.hh:28,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/scene_win/moc_entity_node.cpp:10:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=]
   62 |   virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st);
      |                ^~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:294:8: note:   by 'ost::gfx::Entity::Apply'
  294 |   void Apply(const gfx::MapHandleColorOp& op, bool store=true);
      |        ^~~~~
[ 77%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_null_overlay.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_null_overlay.cpp.o -MF CMakeFiles/ost_gui.dir/data_viewer/moc_null_overlay.cpp.o.d -o CMakeFiles/ost_gui.dir/data_viewer/moc_null_overlay.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_null_overlay.cpp
[ 77%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_overlay_base.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_overlay_base.cpp.o -MF CMakeFiles/ost_gui.dir/data_viewer/moc_overlay_base.cpp.o.d -o CMakeFiles/ost_gui.dir/data_viewer/moc_overlay_base.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_overlay_base.cpp
[ 77%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_pointlist_overlay_base.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/moc_pointlist_overlay_base.cpp.o -MF CMakeFiles/ost_gui.dir/data_viewer/moc_pointlist_overlay_base.cpp.o.d -o CMakeFiles/ost_gui.dir/data_viewer/moc_pointlist_overlay_base.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/data_viewer/moc_pointlist_overlay_base.cpp
[ 77%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/thin_splitter.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/thin_splitter.cc.o -MF CMakeFiles/ost_gui.dir/thin_splitter.cc.o.d -o CMakeFiles/ost_gui.dir/thin_splitter.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/thin_splitter.cc
[ 77%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/perspective.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/perspective.cc.o -MF CMakeFiles/ost_gui.dir/perspective.cc.o.d -o CMakeFiles/ost_gui.dir/perspective.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/perspective.cc
[ 77%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/widget_registry.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/widget_registry.cc.o -MF CMakeFiles/ost_gui.dir/widget_registry.cc.o.d -o CMakeFiles/ost_gui.dir/widget_registry.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/widget_registry.cc
[ 77%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/file_browser.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/file_browser.cc.o -MF CMakeFiles/ost_gui.dir/file_browser.cc.o.d -o CMakeFiles/ost_gui.dir/file_browser.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/file_browser.cc
[ 78%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/file_type_dialog.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/file_type_dialog.cc.o -MF CMakeFiles/ost_gui.dir/file_type_dialog.cc.o.d -o CMakeFiles/ost_gui.dir/file_type_dialog.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/file_type_dialog.cc
[ 78%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/file_viewer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/file_viewer.cc.o -MF CMakeFiles/ost_gui.dir/file_viewer.cc.o.d -o CMakeFiles/ost_gui.dir/file_viewer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/file_viewer.cc
[ 78%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/main.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/main.cc.o -MF CMakeFiles/ost_gui.dir/main.cc.o.d -o CMakeFiles/ost_gui.dir/main.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/main.cc
[ 78%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/gl_canvas.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/gl_canvas.cc.o -MF CMakeFiles/ost_gui.dir/gl_canvas.cc.o.d -o CMakeFiles/ost_gui.dir/gl_canvas.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/gl_canvas.cc
[ 78%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/dock_widget.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/dock_widget.cc.o -MF CMakeFiles/ost_gui.dir/dock_widget.cc.o.d -o CMakeFiles/ost_gui.dir/dock_widget.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/dock_widget.cc
[ 78%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/main_window.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/main_window.cc.o -MF CMakeFiles/ost_gui.dir/main_window.cc.o.d -o CMakeFiles/ost_gui.dir/main_window.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/main_window.cc
[ 78%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_accessibility.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_accessibility.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_accessibility.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_accessibility.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/export_accessibility.cc
[ 78%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/gl_win.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/gl_win.cc.o -MF CMakeFiles/ost_gui.dir/gl_win.cc.o.d -o CMakeFiles/ost_gui.dir/gl_win.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/gl_win.cc
[ 78%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_menu.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_menu.cc.o -MF CMakeFiles/ost_gui.dir/scene_menu.cc.o.d -o CMakeFiles/ost_gui.dir/scene_menu.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_menu.cc
[ 78%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/widget.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/widget.cc.o -MF CMakeFiles/ost_gui.dir/widget.cc.o.d -o CMakeFiles/ost_gui.dir/widget.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/widget.cc
[ 78%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/admin.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/admin.cc.o -MF CMakeFiles/ost_gui.dir/admin.cc.o.d -o CMakeFiles/ost_gui.dir/admin.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/admin.cc
[ 78%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/widget_pool.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/widget_pool.cc.o -MF CMakeFiles/ost_gui.dir/widget_pool.cc.o.d -o CMakeFiles/ost_gui.dir/widget_pool.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/widget_pool.cc
[ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/messages/message_widget.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/messages/message_widget.cc.o -MF CMakeFiles/ost_gui.dir/messages/message_widget.cc.o.d -o CMakeFiles/ost_gui.dir/messages/message_widget.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/messages/message_widget.cc
[ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/messages/message_box_widget.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/messages/message_box_widget.cc.o -MF CMakeFiles/ost_gui.dir/messages/message_box_widget.cc.o.d -o CMakeFiles/ost_gui.dir/messages/message_box_widget.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/messages/message_box_widget.cc
[ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/messages/log_reader.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/messages/log_reader.cc.o -MF CMakeFiles/ost_gui.dir/messages/log_reader.cc.o.d -o CMakeFiles/ost_gui.dir/messages/log_reader.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/messages/log_reader.cc
[ 80%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_sec_structure.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_sec_structure.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_sec_structure.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_sec_structure.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/export_sec_structure.cc
[ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/align_properties_painter.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/align_properties_painter.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/align_properties_painter.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/align_properties_painter.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/align_properties_painter.cc
[ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/base_row.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/base_row.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/base_row.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/base_row.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/base_row.cc
[ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/background_painter.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/background_painter.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/background_painter.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/background_painter.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/background_painter.cc
[ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/conservation_painter.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/conservation_painter.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/conservation_painter.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/conservation_painter.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/conservation_painter.cc
[ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/secstr_row.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/secstr_row.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/secstr_row.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/secstr_row.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/secstr_row.cc
[ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/seq_secstr_painter.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/seq_secstr_painter.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/seq_secstr_painter.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/seq_secstr_painter.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/seq_secstr_painter.cc
[ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/seq_selection_painter.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/seq_selection_painter.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/seq_selection_painter.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/seq_selection_painter.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/seq_selection_painter.cc
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/main.hh:28,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/gosty_app.hh:28,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/main.cc:19:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/widget_state_saver.hh: In instantiation of 'ost::gui::WidgetStateSaver<BASE>::~WidgetStateSaver() [with BASE = QMainWindow]':
/build/reproducible-path/openstructure-2.9.0/modules/gui/src/main.cc:70:69:   required from here
   70 |                                 GostyMainWindow::GetDefaultSize(), 0)
      |                                                                     ^
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/widget_state_saver.hh:323:8: warning: the address of 'ost::gui::WidgetStateSaver<QMainWindow>::QMainWindow' will never be NULL [-Waddress]
  323 |     if(dynamic_cast<QMainWindow* >(this)){
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/widget_state_saver.hh:263:7: note: 'ost::gui::WidgetStateSaver<QMainWindow>::QMainWindow' declared here
  263 | class WidgetStateSaver<BASE>: public BASE
      |       ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/widget_state_saver.hh: In instantiation of 'void ost::gui::WidgetStateSaver<BASE>::set_state_() [with BASE = QMainWindow]':
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/widget_state_saver.hh:286:5:   required from 'ost::gui::WidgetStateSaver<BASE>::WidgetStateSaver(const QString&, QPoint, QSize, QWidget*) [with BASE = QMainWindow]'
  286 |     set_state_();
      |     ^~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/gui/src/main.cc:70:69:   required from here
   70 |                                 GostyMainWindow::GetDefaultSize(), 0)
      |                                                                     ^
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/widget_state_saver.hh:305:10: warning: the address of 'ost::gui::WidgetStateSaver<QMainWindow>::QMainWindow' will never be NULL [-Waddress]
  305 |       if(dynamic_cast<QMainWindow* >(this)){
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/widget_state_saver.hh:263:7: note: 'ost::gui::WidgetStateSaver<QMainWindow>::QMainWindow' declared here
  263 | class WidgetStateSaver<BASE>: public BASE
      |       ^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/gui/src/file_browser.cc: In constructor 'ost::gui::FileBrowser::FileBrowser(QWidget*)':
/build/reproducible-path/openstructure-2.9.0/modules/gui/src/file_browser.cc:62:13: warning: 'QDirModel::QDirModel(QObject*)' is deprecated: Use QFileSystemModel [-Wdeprecated-declarations]
   62 |  model_(new QDirModel),
      |             ^~~~~~~~~
In file included from /usr/include/x86_64-linux-gnu/qt5/QtWidgets/QDirModel:1,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/file_browser.cc:53:
/usr/include/x86_64-linux-gnu/qt5/QtWidgets/qdirmodel.h:73:67: note: declared here
   73 |     QT_DEPRECATED_VERSION_X_5_15("Use QFileSystemModel") explicit QDirModel(QObject *parent = nullptr);
      |                                                                   ^~~~~~~~~
/build/reproducible-path/openstructure-2.9.0/modules/gui/src/file_browser.cc: In constructor 'ost::gui::FileBrowser::FileBrowser(const QString&, QWidget*)':
/build/reproducible-path/openstructure-2.9.0/modules/gui/src/file_browser.cc:102:13: warning: 'QDirModel::QDirModel(QObject*)' is deprecated: Use QFileSystemModel [-Wdeprecated-declarations]
  102 |  model_(new QDirModel),
      |             ^~~~~~~~~
/usr/include/x86_64-linux-gnu/qt5/QtWidgets/qdirmodel.h:73:67: note: declared here
   73 |     QT_DEPRECATED_VERSION_X_5_15("Use QFileSystemModel") explicit QDirModel(QObject *parent = nullptr);
      |                                                                   ^~~~~~~~~
[ 80%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_gfx_node.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_gfx_node.cc.o -MF CMakeFiles/_ost_gfx.dir/export_gfx_node.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_gfx_node.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/export_gfx_node.cc
[ 80%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/seq_text_painter.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/seq_text_painter.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/seq_text_painter.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/seq_text_painter.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/seq_text_painter.cc
[ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_delegate.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_delegate.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/sequence_delegate.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/sequence_delegate.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_delegate.cc
[ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_model.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_model.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/sequence_model.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/sequence_model.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_model.cc
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/secstr_row.cc:29:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=]
   55 |   virtual void DeepSwap(GfxNode& n);
      |                ^~~~~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note:   by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)'
   58 |   virtual void DeepSwap(GfxObj& go);
      |                ^~~~~~~~
[ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_row.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_row.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/sequence_row.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/sequence_row.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_row.cc
[ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_search_bar.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_search_bar.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/sequence_search_bar.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/sequence_search_bar.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_search_bar.cc
[ 81%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_non_standard.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_non_standard.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_non_standard.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_non_standard.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/export_non_standard.cc
[ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_table_view.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_table_view.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/sequence_table_view.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/sequence_table_view.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_table_view.cc
[ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_viewer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_viewer.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/sequence_viewer.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/sequence_viewer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_viewer.cc
[ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/tick_painter.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/tick_painter.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/tick_painter.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/tick_painter.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/tick_painter.cc
[ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/title_row.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/title_row.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/title_row.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/title_row.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/title_row.cc
[ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/alignment_view_object.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/alignment_view_object.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/alignment_view_object.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/alignment_view_object.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/alignment_view_object.cc
[ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/base_view_object.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/base_view_object.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/base_view_object.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/base_view_object.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/base_view_object.cc
[ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_view_object.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/sequence_viewer/sequence_view_object.cc.o -MF CMakeFiles/ost_gui.dir/sequence_viewer/sequence_view_object.cc.o.d -o CMakeFiles/ost_gui.dir/sequence_viewer/sequence_view_object.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_view_object.cc
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_row.cc:29:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=]
   55 |   virtual void DeepSwap(GfxNode& n);
      |                ^~~~~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note:   by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)'
   58 |   virtual void DeepSwap(GfxObj& go);
      |                ^~~~~~~~
[ 81%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/gosty_app.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/gosty_app.cc.o -MF CMakeFiles/ost_gui.dir/gosty_app.cc.o.d -o CMakeFiles/ost_gui.dir/gosty_app.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/gosty_app.cc
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_model.hh:33,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_model.cc:30:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=]
   55 |   virtual void DeepSwap(GfxNode& n);
      |                ^~~~~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note:   by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)'
   58 |   virtual void DeepSwap(GfxObj& go);
      |                ^~~~~~~~
[ 81%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_molck.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_molck.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_molck.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_molck.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/export_molck.cc
[ 82%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/main_area.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/main_area.cc.o -MF CMakeFiles/ost_gui.dir/main_area.cc.o.d -o CMakeFiles/ost_gui.dir/main_area.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/main_area.cc
[ 82%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/widget_state_saver.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/widget_state_saver.cc.o -MF CMakeFiles/ost_gui.dir/widget_state_saver.cc.o.d -o CMakeFiles/ost_gui.dir/widget_state_saver.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/widget_state_saver.cc
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_view_object.hh:30,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/alignment_view_object.hh:32,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/alignment_view_object.cc:41:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=]
   55 |   virtual void DeepSwap(GfxNode& n);
      |                ^~~~~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note:   by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)'
   58 |   virtual void DeepSwap(GfxObj& go);
      |                ^~~~~~~~
[ 82%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_selection.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_selection.cc.o -MF CMakeFiles/ost_gui.dir/scene_selection.cc.o.d -o CMakeFiles/ost_gui.dir/scene_selection.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_selection.cc
[ 82%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/widget_geom_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/widget_geom_handler.cc.o -MF CMakeFiles/ost_gui.dir/widget_geom_handler.cc.o.d -o CMakeFiles/ost_gui.dir/widget_geom_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/widget_geom_handler.cc
[ 82%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/file_loader.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/file_loader.cc.o -MF CMakeFiles/ost_gui.dir/file_loader.cc.o.d -o CMakeFiles/ost_gui.dir/file_loader.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/file_loader.cc
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_view_object.hh:30,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_view_object.cc:32:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=]
   55 |   virtual void DeepSwap(GfxNode& n);
      |                ^~~~~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note:   by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)'
   58 |   virtual void DeepSwap(GfxObj& go);
      |                ^~~~~~~~
[ 82%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/button_bar.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/button_bar.cc.o -MF CMakeFiles/ost_gui.dir/panels/button_bar.cc.o.d -o CMakeFiles/ost_gui.dir/panels/button_bar.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/button_bar.cc
[ 82%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/drop_box.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/drop_box.cc.o -MF CMakeFiles/ost_gui.dir/panels/drop_box.cc.o.d -o CMakeFiles/ost_gui.dir/panels/drop_box.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/drop_box.cc
[ 82%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/panel_bar.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/panel_bar.cc.o -MF CMakeFiles/ost_gui.dir/panels/panel_bar.cc.o.d -o CMakeFiles/ost_gui.dir/panels/panel_bar.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/panel_bar.cc
[ 82%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_membrane.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_membrane.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_membrane.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_membrane.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/export_membrane.cc
[ 83%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_entity_to_density.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_entity_to_density.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_entity_to_density.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_entity_to_density.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/export_entity_to_density.cc
[ 83%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_symmetry_node.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_symmetry_node.cc.o -MF CMakeFiles/_ost_gfx.dir/export_symmetry_node.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_symmetry_node.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/export_symmetry_node.cc
[ 83%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/bottom_bar.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/bottom_bar.cc.o -MF CMakeFiles/ost_gui.dir/panels/bottom_bar.cc.o.d -o CMakeFiles/ost_gui.dir/panels/bottom_bar.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/bottom_bar.cc
[ 83%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/button_box.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/button_box.cc.o -MF CMakeFiles/ost_gui.dir/panels/button_box.cc.o.d -o CMakeFiles/ost_gui.dir/panels/button_box.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/button_box.cc
[ 83%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/event_button.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/event_button.cc.o -MF CMakeFiles/ost_gui.dir/panels/event_button.cc.o.d -o CMakeFiles/ost_gui.dir/panels/event_button.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/event_button.cc
[ 85%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/panel_manager.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/panel_manager.cc.o -MF CMakeFiles/ost_gui.dir/panels/panel_manager.cc.o.d -o CMakeFiles/ost_gui.dir/panels/panel_manager.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/panel_manager.cc
[ 85%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/panel_widget_container.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/panel_widget_container.cc.o -MF CMakeFiles/ost_gui.dir/panels/panel_widget_container.cc.o.d -o CMakeFiles/ost_gui.dir/panels/panel_widget_container.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/panel_widget_container.cc
[ 85%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/panel_bar_widget_holder.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/panel_bar_widget_holder.cc.o -MF CMakeFiles/ost_gui.dir/panels/panel_bar_widget_holder.cc.o.d -o CMakeFiles/ost_gui.dir/panels/panel_bar_widget_holder.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/panel_bar_widget_holder.cc
[ 85%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/side_bar.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/side_bar.cc.o -MF CMakeFiles/ost_gui.dir/panels/side_bar.cc.o.d -o CMakeFiles/ost_gui.dir/panels/side_bar.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/side_bar.cc
[ 85%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/splitter_panel_bar.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/splitter_panel_bar.cc.o -MF CMakeFiles/ost_gui.dir/panels/splitter_panel_bar.cc.o.d -o CMakeFiles/ost_gui.dir/panels/splitter_panel_bar.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/splitter_panel_bar.cc
[ 85%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/panels/tabbed_panel_bar.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/panels/tabbed_panel_bar.cc.o -MF CMakeFiles/ost_gui.dir/panels/tabbed_panel_bar.cc.o.d -o CMakeFiles/ost_gui.dir/panels/tabbed_panel_bar.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/tabbed_panel_bar.cc
[ 85%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_option_group.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_option_group.cc.o -MF CMakeFiles/ost_gui.dir/tools/tool_option_group.cc.o.d -o CMakeFiles/ost_gui.dir/tools/tool_option_group.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool_option_group.cc
[ 85%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_options.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_options.cc.o -MF CMakeFiles/ost_gui.dir/tools/tool_options.cc.o.d -o CMakeFiles/ost_gui.dir/tools/tool_options.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool_options.cc
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_viewer.hh:31,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/gosty_app.cc:29:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=]
   62 |   virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st);
      |                ^~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_viewer.hh:32:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:294:8: note:   by 'ost::gfx::Entity::Apply'
  294 |   void Apply(const gfx::MapHandleColorOp& op, bool store=true);
      |        ^~~~~
[ 85%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_option.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_option.cc.o -MF CMakeFiles/ost_gui.dir/tools/tool_option.cc.o.d -o CMakeFiles/ost_gui.dir/tools/tool_option.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool_option.cc
[ 85%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_manager.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_manager.cc.o -MF CMakeFiles/ost_gui.dir/tools/tool_manager.cc.o.d -o CMakeFiles/ost_gui.dir/tools/tool_manager.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool_manager.cc
[ 85%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_options_win.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_options_win.cc.o -MF CMakeFiles/ost_gui.dir/tools/tool_options_win.cc.o.d -o CMakeFiles/ost_gui.dir/tools/tool_options_win.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool_options_win.cc
[ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool.cc.o -MF CMakeFiles/ost_gui.dir/tools/tool.cc.o.d -o CMakeFiles/ost_gui.dir/tools/tool.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool.cc
[ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/mouse_event.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/mouse_event.cc.o -MF CMakeFiles/ost_gui.dir/tools/mouse_event.cc.o.d -o CMakeFiles/ost_gui.dir/tools/mouse_event.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/mouse_event.cc
In file included from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_selection.cc:28:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=]
   62 |   virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st);
      |                ^~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_selection.cc:29:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:294:8: note:   by 'ost::gfx::Entity::Apply'
  294 |   void Apply(const gfx::MapHandleColorOp& op, bool store=true);
      |        ^~~~~
[ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/manipulator.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/manipulator.cc.o -MF CMakeFiles/ost_gui.dir/tools/manipulator.cc.o.d -o CMakeFiles/ost_gui.dir/tools/manipulator.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/manipulator.cc
[ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_options_widget.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_options_widget.cc.o -MF CMakeFiles/ost_gui.dir/tools/tool_options_widget.cc.o.d -o CMakeFiles/ost_gui.dir/tools/tool_options_widget.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool_options_widget.cc
[ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_bar.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/tool_bar.cc.o -MF CMakeFiles/ost_gui.dir/tools/tool_bar.cc.o.d -o CMakeFiles/ost_gui.dir/tools/tool_bar.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool_bar.cc
[ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/selection_tool.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/selection_tool.cc.o -MF CMakeFiles/ost_gui.dir/tools/selection_tool.cc.o.d -o CMakeFiles/ost_gui.dir/tools/selection_tool.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/selection_tool.cc
[ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/measure_tool.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/measure_tool.cc.o -MF CMakeFiles/ost_gui.dir/tools/measure_tool.cc.o.d -o CMakeFiles/ost_gui.dir/tools/measure_tool.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/measure_tool.cc
[ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/gutter.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/gutter.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/gutter.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/gutter.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/gutter.cc
[ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/main_thread_runner.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/main_thread_runner.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/main_thread_runner.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/main_thread_runner.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/main_thread_runner.cc
[ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/output_redirector.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/output_redirector.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/output_redirector.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/output_redirector.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/output_redirector.cc
[ 86%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_biounit.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_biounit.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_biounit.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_biounit.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/export_biounit.cc
[ 86%] Building CXX object modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_gdt.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_alg_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/export_gdt.cc.o -MF CMakeFiles/_ost_mol_alg.dir/export_gdt.cc.o.d -o CMakeFiles/_ost_mol_alg.dir/export_gdt.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/export_gdt.cc
[ 86%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/completer_base.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/completer_base.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/completer_base.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/completer_base.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/completer_base.cc
[ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/dir_model.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/dir_model.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/dir_model.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/dir_model.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/dir_model.cc
[ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/path_completer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/path_completer.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/path_completer.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/path_completer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/path_completer.cc
[ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_context_parser.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_context_parser.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_context_parser.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_context_parser.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_context_parser.cc
[ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_completer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_completer.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_completer.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_completer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_completer.cc
[ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_interpreter.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_interpreter.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_interpreter.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_interpreter.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_interpreter.cc
[ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_interpreter_worker.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_interpreter_worker.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_interpreter_worker.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_interpreter_worker.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_interpreter_worker.cc
/build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/dir_model.cc: In constructor 'ost::gui::OstDirModel::OstDirModel(QObject*)':
/build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/dir_model.cc:31:18: warning: 'QDirModel::QDirModel(QObject*)' is deprecated: Use QFileSystemModel [-Wdeprecated-declarations]
   31 |  QDirModel(parent)
      |                  ^
In file included from /usr/include/x86_64-linux-gnu/qt5/QtWidgets/QDirModel:1,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/dir_model.hh:26,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/dir_model.cc:23:
/usr/include/x86_64-linux-gnu/qt5/QtWidgets/qdirmodel.h:73:67: note: declared here
   73 |     QT_DEPRECATED_VERSION_X_5_15("Use QFileSystemModel") explicit QDirModel(QObject *parent = nullptr);
      |                                                                   ^~~~~~~~~
[ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_namespace_tree_model.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_namespace_tree_model.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_namespace_tree_model.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_namespace_tree_model.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_namespace_tree_model.cc
[ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_namespace_tree_item.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_namespace_tree_item.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_namespace_tree_item.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_namespace_tree_item.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_namespace_tree_item.cc
[ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_shell.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_shell.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_shell.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_shell.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_shell.cc
[ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_shell_widget.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_shell_widget.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_shell_widget.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_shell_widget.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_shell_widget.cc
[ 87%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_shell_text_document_layout.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_shell_text_document_layout.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_shell_text_document_layout.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_shell_text_document_layout.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_shell_text_document_layout.cc
[ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_tokenizer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_tokenizer.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_tokenizer.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_tokenizer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_tokenizer.cc
[ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_syntax_highlighter.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/python_syntax_highlighter.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/python_syntax_highlighter.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/python_syntax_highlighter.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_syntax_highlighter.cc
[ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/shell_history.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/shell_history.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/shell_history.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/shell_history.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/shell_history.cc
[ 88%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_gfx_obj.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_gfx_obj.cc.o -MF CMakeFiles/_ost_gfx.dir/export_gfx_obj.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_gfx_obj.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/export_gfx_obj.cc
[ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/string_literal_positions.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/string_literal_positions.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/string_literal_positions.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/string_literal_positions.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/string_literal_positions.cc
[ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/text_logger.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/text_logger.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/text_logger.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/text_logger.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/text_logger.cc
[ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/state_machine.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/state_machine.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/state_machine.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/state_machine.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/state_machine.cc
[ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/state.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/state.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/state.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/state.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/state.cc
[ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/transition.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/transition.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/transition.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/transition.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/transition.cc
[ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/transition_guard.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/python_shell/transition_guard.cc.o -MF CMakeFiles/ost_gui.dir/python_shell/transition_guard.cc.o.d -o CMakeFiles/ost_gui.dir/python_shell/transition_guard.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/transition_guard.cc
[ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/context_menu.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/context_menu.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/context_menu.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/context_menu.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/context_menu.cc
[ 88%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/current_selection_node.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/current_selection_node.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/current_selection_node.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/current_selection_node.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/current_selection_node.cc
[ 88%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_entity.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_entity.cc.o -MF CMakeFiles/_ost_gfx.dir/export_entity.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_entity.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/export_entity.cc
[ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/custom_part_node.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/custom_part_node.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/custom_part_node.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/custom_part_node.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/custom_part_node.cc
[ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/scene_node.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/scene_node.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/scene_node.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/scene_node.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/scene_node.cc
[ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/label_node.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/label_node.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/label_node.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/label_node.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/label_node.cc
[ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/entity_node.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/entity_node.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/entity_node.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/entity_node.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/entity_node.cc
[ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/entity_part_node.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/entity_part_node.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/entity_part_node.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/entity_part_node.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/entity_part_node.cc
[ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/gfx_scene_node.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/gfx_scene_node.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/gfx_scene_node.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/gfx_scene_node.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/gfx_scene_node.cc
[ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/render_mode_node.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/render_mode_node.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/render_mode_node.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/render_mode_node.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/render_mode_node.cc
[ 90%] Linking CXX shared module ../../../../stage/lib/python3.12/dist-packages/ost/mol/alg/_ost_mol_alg.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_mol_alg.dir/link.txt --verbose=1
[ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/render_modes_node.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/render_modes_node.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/render_modes_node.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/render_modes_node.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/render_modes_node.cc
[ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/root_node.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/root_node.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/root_node.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/root_node.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/root_node.cc
[ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/scene_win.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/scene_win.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/scene_win.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/scene_win.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/scene_win.cc
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/_ost_mol_alg.dir/link.d -Wl,-z,relro -shared  -o ../../../../stage/lib/python3.12/dist-packages/ost/mol/alg/_ost_mol_alg.so CMakeFiles/_ost_mol_alg.dir/wrap_mol_alg.cc.o CMakeFiles/_ost_mol_alg.dir/export_svd_superpose.cc.o CMakeFiles/_ost_mol_alg.dir/export_clash.cc.o CMakeFiles/_ost_mol_alg.dir/export_trajectory_analysis.cc.o CMakeFiles/_ost_mol_alg.dir/export_structure_analysis.cc.o CMakeFiles/_ost_mol_alg.dir/export_contact_overlap.cc.o CMakeFiles/_ost_mol_alg.dir/export_accessibility.cc.o CMakeFiles/_ost_mol_alg.dir/export_sec_structure.cc.o CMakeFiles/_ost_mol_alg.dir/export_non_standard.cc.o CMakeFiles/_ost_mol_alg.dir/export_molck.cc.o CMakeFiles/_ost_mol_alg.dir/export_membrane.cc.o CMakeFiles/_ost_mol_alg.dir/export_entity_to_density.cc.o CMakeFiles/_ost_mol_alg.dir/export_biounit.cc.o CMakeFiles/_ost_mol_alg.dir/export_gdt.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_mol_alg.so.2.9.0 /usr/lib/x86_64-linux-gnu/libpython3.12.so /usr/lib/x86_64-linux-gnu/libboost_python312.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../../stage/lib/libost_img_alg.so.2.9.0 ../../../../stage/lib/libost_img.so.2.9.0 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so ../../../../stage/lib/libost_seq_alg.so.2.9.0 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../../stage/lib/libost_conop.so.2.9.0 ../../../../stage/lib/libost_db.so.2.9.0 ../../../../stage/lib/libost_seq.so.2.9.0 ../../../../stage/lib/libost_mol.so.2.9.0 ../../../../stage/lib/libost_info.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../../stage/lib/libost_base.so.2.9.0 ../../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./__init__.pyc\",\"__init__.py\",doraise=True)"
[ 90%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/scene_win_model.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/scene_win/scene_win_model.cc.o -MF CMakeFiles/ost_gui.dir/scene_win/scene_win_model.cc.o.d -o CMakeFiles/ost_gui.dir/scene_win/scene_win_model.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/scene_win_model.cc
[ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/tools/map_tool.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/tools/map_tool.cc.o -MF CMakeFiles/ost_gui.dir/tools/map_tool.cc.o.d -o CMakeFiles/ost_gui.dir/tools/map_tool.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/map_tool.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/views.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./views.pyc\",\"views.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/superpose.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./superpose.pyc\",\"superpose.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/qsscoring.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./qsscoring.pyc\",\"qsscoring.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/trajectory_analysis.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./trajectory_analysis.pyc\",\"trajectory_analysis.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/structure_analysis.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./structure_analysis.pyc\",\"structure_analysis.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/helix_kinks.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./helix_kinks.pyc\",\"helix_kinks.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/hbond.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./hbond.pyc\",\"hbond.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/lddt.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./lddt.pyc\",\"lddt.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/qsscore.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./qsscore.pyc\",\"qsscore.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/scoring.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./scoring.pyc\",\"scoring.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/chain_mapping.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./chain_mapping.pyc\",\"chain_mapping.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/stereochemistry.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./stereochemistry.pyc\",\"stereochemistry.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/dockq.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./dockq.pyc\",\"dockq.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/contact_score.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./contact_score.pyc\",\"contact_score.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/ligand_scoring.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./ligand_scoring.pyc\",\"ligand_scoring.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/ligand_scoring_base.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./ligand_scoring_base.pyc\",\"ligand_scoring_base.py\",doraise=True)"
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/custom_part_node.cc:24:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=]
   55 |   virtual void DeepSwap(GfxNode& n);
      |                ^~~~~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note:   by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)'
   58 |   virtual void DeepSwap(GfxObj& go);
      |                ^~~~~~~~
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/ligand_scoring_scrmsd.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./ligand_scoring_scrmsd.pyc\",\"ligand_scoring_scrmsd.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/ligand_scoring_lddtpli.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./ligand_scoring_lddtpli.pyc\",\"ligand_scoring_lddtpli.py\",doraise=True)"
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/map_iso.hh:33,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/context_menu.cc:31:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=]
   62 |   virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st);
      |                ^~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/entity_node.hh:28,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/context_menu.cc:34:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:294:8: note:   by 'ost::gfx::Entity::Apply'
  294 |   void Apply(const gfx::MapHandleColorOp& op, bool store=true);
      |        ^~~~~
[ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/argand.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/argand.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/argand.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/argand.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/argand.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod/bb_lddt.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/alg/./bb_lddt.pyc\",\"bb_lddt.py\",doraise=True)"
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 91%] Built target _ost_mol_alg
[ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/data_viewer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/data_viewer.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/data_viewer.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/data_viewer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/data_viewer.cc
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/render_mode_node.cc:21:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=]
   55 |   virtual void DeepSwap(GfxNode& n);
      |                ^~~~~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note:   by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)'
   58 |   virtual void DeepSwap(GfxObj& go);
      |                ^~~~~~~~
[ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/data_viewer_panel.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/data_viewer_panel.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/data_viewer_panel.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/data_viewer_panel.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/data_viewer_panel.cc
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/entity_part_node.cc:22:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=]
   55 |   virtual void DeepSwap(GfxNode& n);
      |                ^~~~~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note:   by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)'
   58 |   virtual void DeepSwap(GfxObj& go);
      |                ^~~~~~~~
[ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/data_viewer_panel_base.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/data_viewer_panel_base.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/data_viewer_panel_base.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/data_viewer_panel_base.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/data_viewer_panel_base.cc
[ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/draw_overlay.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/draw_overlay.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/draw_overlay.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/draw_overlay.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/draw_overlay.cc
[ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/drawing_functions.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/drawing_functions.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/drawing_functions.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/drawing_functions.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/drawing_functions.cc
[ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/fft_panel.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/fft_panel.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/fft_panel.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/fft_panel.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/fft_panel.cc
[ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/info_panel.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/info_panel.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/info_panel.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/info_panel.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/info_panel.cc
[ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/img2qt.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/img2qt.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/img2qt.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/img2qt.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/img2qt.cc
[ 91%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/mask_overlay.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/mask_overlay.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/mask_overlay.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/mask_overlay.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/mask_overlay.cc
[ 92%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/null_overlay.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/null_overlay.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/null_overlay.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/null_overlay.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/null_overlay.cc
[ 92%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/overlay_base.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/overlay_base.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/overlay_base.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/overlay_base.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/overlay_base.cc
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object_base.hh:34,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:40,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/scene_win_model.cc:28:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=]
   55 |   virtual void DeepSwap(GfxNode& n);
      |                ^~~~~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note:   by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)'
   58 |   virtual void DeepSwap(GfxObj& go);
      |                ^~~~~~~~
[ 92%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/overlay_manager.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/overlay_manager.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/overlay_manager.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/overlay_manager.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/overlay_manager.cc
[ 92%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/overlay_manager_gui.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/overlay_manager_gui.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/overlay_manager_gui.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/overlay_manager_gui.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/overlay_manager_gui.cc
[ 92%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/pointlist_overlay.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/pointlist_overlay.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/pointlist_overlay.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/pointlist_overlay.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/pointlist_overlay.cc
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/render_modes_node.cc:25:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:62:16: warning: 'virtual void ost::gfx::GfxObj::Apply(ost::gfx::GfxNodeVisitor&, ost::gfx::GfxNodeVisitor::Stack)' was hidden [-Woverloaded-virtual=]
   62 |   virtual void Apply(GfxNodeVisitor& v, GfxNodeVisitor::Stack st);
      |                ^~~~~
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:294:8: note:   by 'ost::gfx::Entity::Apply'
  294 |   void Apply(const gfx::MapHandleColorOp& op, bool store=true);
      |        ^~~~~
[ 92%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/pointlist_overlay_base.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/pointlist_overlay_base.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/pointlist_overlay_base.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/pointlist_overlay_base.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/pointlist_overlay_base.cc
[ 92%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/strategies.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/strategies.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/strategies.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/strategies.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/strategies.cc
[ 92%] Building CXX object modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/viewer_normalizer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DOST_MODULE_OST_GUI -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -Dost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/src/CMakeFiles/ost_gui.dir/data_viewer/viewer_normalizer.cc.o -MF CMakeFiles/ost_gui.dir/data_viewer/viewer_normalizer.cc.o.d -o CMakeFiles/ost_gui.dir/data_viewer/viewer_normalizer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/viewer_normalizer.cc
[ 93%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_surface.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_surface.cc.o -MF CMakeFiles/_ost_gfx.dir/export_surface.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_surface.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/export_surface.cc
make  -f modules/io/pymod/CMakeFiles/_ost_io.dir/build.make modules/io/pymod/CMakeFiles/_ost_io.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/io/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/pymod/CMakeFiles/_ost_io.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/io/pymod/CMakeFiles/_ost_io.dir/build.make modules/io/pymod/CMakeFiles/_ost_io.dir/build
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 93%] Building CXX object modules/io/pymod/CMakeFiles/_ost_io.dir/wrap_io.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/pymod/CMakeFiles/_ost_io.dir/wrap_io.cc.o -MF CMakeFiles/_ost_io.dir/wrap_io.cc.o.d -o CMakeFiles/_ost_io.dir/wrap_io.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/pymod/wrap_io.cc
[ 93%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_primitives.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_primitives.cc.o -MF CMakeFiles/_ost_gfx.dir/export_primitives.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_primitives.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/export_primitives.cc
[ 93%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_primlist.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_primlist.cc.o -MF CMakeFiles/_ost_gfx.dir/export_primlist.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_primlist.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/export_primlist.cc
/build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/scene_win.cc: In member function 'void ost::gui::SceneWin::RowsInserted(const QModelIndex&, int, int)':
/build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/scene_win.cc:117:31: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations]
  117 |     model->select(parent.child(start,0),QItemSelectionModel::ClearAndSelect|QItemSelectionModel::Rows);
      |                   ~~~~~~~~~~~~^~~~~~~~~
In file included from /usr/include/x86_64-linux-gnu/qt5/QtCore/QModelIndex:1,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/scene_node.hh:26,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/scene_win_model.hh:34,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/scene_win.cc:26:
/usr/include/x86_64-linux-gnu/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here
  455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const
      |                    ^~~~~~~~~~~
[ 93%] Building CXX object modules/io/pymod/CMakeFiles/_ost_io.dir/export_pdb_io.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/pymod/CMakeFiles/_ost_io.dir/export_pdb_io.cc.o -MF CMakeFiles/_ost_io.dir/export_pdb_io.cc.o.d -o CMakeFiles/_ost_io.dir/export_pdb_io.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/pymod/export_pdb_io.cc
[ 93%] Building CXX object modules/io/pymod/CMakeFiles/_ost_io.dir/export_mmcif_io.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/pymod/CMakeFiles/_ost_io.dir/export_mmcif_io.cc.o -MF CMakeFiles/_ost_io.dir/export_mmcif_io.cc.o.d -o CMakeFiles/_ost_io.dir/export_mmcif_io.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/pymod/export_mmcif_io.cc
[ 93%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_scene_observer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_scene_observer.cc.o -MF CMakeFiles/_ost_gfx.dir/export_scene_observer.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_scene_observer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/export_scene_observer.cc
[ 93%] Building CXX object modules/io/pymod/CMakeFiles/_ost_io.dir/export_omf_io.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/pymod/CMakeFiles/_ost_io.dir/export_omf_io.cc.o -MF CMakeFiles/_ost_io.dir/export_omf_io.cc.o.d -o CMakeFiles/_ost_io.dir/export_omf_io.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/pymod/export_omf_io.cc
[ 93%] Building CXX object modules/io/pymod/CMakeFiles/_ost_io.dir/export_map_io.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/pymod/CMakeFiles/_ost_io.dir/export_map_io.cc.o -MF CMakeFiles/_ost_io.dir/export_map_io.cc.o.d -o CMakeFiles/_ost_io.dir/export_map_io.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/pymod/export_map_io.cc
[ 93%] Building CXX object modules/io/pymod/CMakeFiles/_ost_io.dir/export_sdf_io.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_io_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/io/pymod/CMakeFiles/_ost_io.dir/export_sdf_io.cc.o -MF CMakeFiles/_ost_io.dir/export_sdf_io.cc.o.d -o CMakeFiles/_ost_io.dir/export_sdf_io.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/pymod/export_sdf_io.cc
[ 93%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_render_options.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_render_options.cc.o -MF CMakeFiles/_ost_gfx.dir/export_render_options.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_render_options.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/export_render_options.cc
[ 93%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_color.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_color.cc.o -MF CMakeFiles/_ost_gfx.dir/export_color.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_color.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/export_color.cc
[ 93%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_gradient.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_gradient.cc.o -MF CMakeFiles/_ost_gfx.dir/export_gradient.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_gradient.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/export_gradient.cc
[ 93%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_color_ops.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_color_ops.cc.o -MF CMakeFiles/_ost_gfx.dir/export_color_ops.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_color_ops.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/export_color_ops.cc
[ 93%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_glwin_base.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_glwin_base.cc.o -MF CMakeFiles/_ost_gfx.dir/export_glwin_base.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_glwin_base.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/export_glwin_base.cc
[ 93%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_exporter.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_exporter.cc.o -MF CMakeFiles/_ost_gfx.dir/export_exporter.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_exporter.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/export_exporter.cc
[ 93%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_bitmap.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_bitmap.cc.o -MF CMakeFiles/_ost_gfx.dir/export_bitmap.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_bitmap.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/export_bitmap.cc
[ 95%] Building CXX object modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_map.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gfx_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/export_map.cc.o -MF CMakeFiles/_ost_gfx.dir/export_map.cc.o.d -o CMakeFiles/_ost_gfx.dir/export_map.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/export_map.cc
[ 95%] Linking CXX shared library ../../../stage/lib/libost_gui.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_gui.dir/link.txt --verbose=1
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CMakeFiles/ost_gui.dir/data_viewer/drawing_functions.cc.o CMakeFiles/ost_gui.dir/data_viewer/fft_panel.cc.o CMakeFiles/ost_gui.dir/data_viewer/info_panel.cc.o CMakeFiles/ost_gui.dir/data_viewer/img2qt.cc.o CMakeFiles/ost_gui.dir/data_viewer/mask_overlay.cc.o CMakeFiles/ost_gui.dir/data_viewer/null_overlay.cc.o CMakeFiles/ost_gui.dir/data_viewer/overlay_base.cc.o CMakeFiles/ost_gui.dir/data_viewer/overlay_manager.cc.o CMakeFiles/ost_gui.dir/data_viewer/overlay_manager_gui.cc.o CMakeFiles/ost_gui.dir/data_viewer/pointlist_overlay.cc.o CMakeFiles/ost_gui.dir/data_viewer/pointlist_overlay_base.cc.o CMakeFiles/ost_gui.dir/data_viewer/strategies.cc.o CMakeFiles/ost_gui.dir/data_viewer/viewer_normalizer.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: /usr/lib/x86_64-linux-gnu/libpython3.12.so /usr/lib/x86_64-linux-gnu/libboost_python312.so.1.83.0 ../../../stage/lib/libost_gfx.so.2.9.0 ../../../stage/lib/libost_io.so.2.9.0 ../../../stage/lib/libost_mol_alg.so.2.9.0 ../../../stage/lib/libost_seq_alg.so.2.9.0 /usr/lib/x86_64-linux-gnu/libOpenGL.so /usr/lib/x86_64-linux-gnu/libGLX.so /usr/lib/x86_64-linux-gnu/libGLU.so /usr/lib/x86_64-linux-gnu/libparasail.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../stage/lib/libost_conop.so.2.9.0 ../../../stage/lib/libost_db.so.2.9.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_seq.so.2.9.0 ../../../stage/lib/libost_mol.so.2.9.0 ../../../stage/lib/libost_img_alg.so.2.9.0 ../../../stage/lib/libost_img.so.2.9.0 ../../../stage/lib/libost_info.so.2.9.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so ../../../stage/lib/libost_base.so.2.9.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E cmake_symlink_library ../../../stage/lib/libost_gui.so.2.9.0 ../../../stage/lib/libost_gui.so.2.9 ../../../stage/lib/libost_gui.so
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/rcc --name dngr --output /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/qrc_dngr.cpp /build/reproducible-path/openstructure-2.9.0/modules/gui/src/dngr.qrc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/lib/qt5/bin/moc @/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/moc_gosty.cpp_parameters
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/gui/src/CMakeFiles/gosty.dir/gosty.cc.o -MF CMakeFiles/gosty.dir/gosty.cc.o.d -o CMakeFiles/gosty.dir/gosty.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/src/gosty.cc
[ 95%] Building CXX object modules/gui/src/CMakeFiles/gosty.dir/qrc_dngr.cpp.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/gui/src/CMakeFiles/gosty.dir/qrc_dngr.cpp.o -MF CMakeFiles/gosty.dir/qrc_dngr.cpp.o.d -o CMakeFiles/gosty.dir/qrc_dngr.cpp.o -c /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/qrc_dngr.cpp
[ 95%] Linking CXX executable ../../../stage/lib/openstructure/libexec/gosty
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/gosty.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file,CMakeFiles/gosty.dir/link.d CMakeFiles/gosty.dir/gosty.cc.o CMakeFiles/gosty.dir/moc_gosty.cpp.o CMakeFiles/gosty.dir/qrc_dngr.cpp.o -o ../../../stage/lib/openstructure/libexec/gosty   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_gui.so.2.9.0 /usr/lib/x86_64-linux-gnu/libpython3.12.so /usr/lib/x86_64-linux-gnu/libboost_python312.so.1.83.0 ../../../stage/lib/libost_gfx.so.2.9.0 /usr/lib/x86_64-linux-gnu/libOpenGL.so /usr/lib/x86_64-linux-gnu/libGLX.so /usr/lib/x86_64-linux-gnu/libGLU.so ../../../stage/lib/libost_io.so.2.9.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so ../../../stage/lib/libost_mol_alg.so.2.9.0 ../../../stage/lib/libost_conop.so.2.9.0 ../../../stage/lib/libost_db.so.2.9.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_img_alg.so.2.9.0 ../../../stage/lib/libost_img.so.2.9.0 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../stage/lib/libost_seq_alg.so.2.9.0 ../../../stage/lib/libost_seq.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../stage/lib/libost_mol.so.2.9.0 ../../../stage/lib/libost_info.so.2.9.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 ../../../stage/lib/libost_base.so.2.9.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libparasail.so
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 95%] Built target gosty
[ 95%] Linking CXX shared module ../../../stage/lib/python3.12/dist-packages/ost/gfx/_ost_gfx.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/gradients.xml /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/scene/gradients.xml
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_gfx.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/_ost_gfx.dir/link.d -Wl,-z,relro -shared  -o ../../../stage/lib/python3.12/dist-packages/ost/gfx/_ost_gfx.so CMakeFiles/_ost_gfx.dir/wrap_gfx.cc.o CMakeFiles/_ost_gfx.dir/export_scene.cc.o CMakeFiles/_ost_gfx.dir/export_gfx_node.cc.o CMakeFiles/_ost_gfx.dir/export_symmetry_node.cc.o CMakeFiles/_ost_gfx.dir/export_gfx_obj.cc.o CMakeFiles/_ost_gfx.dir/export_entity.cc.o CMakeFiles/_ost_gfx.dir/export_surface.cc.o CMakeFiles/_ost_gfx.dir/export_primitives.cc.o CMakeFiles/_ost_gfx.dir/export_primlist.cc.o CMakeFiles/_ost_gfx.dir/export_scene_observer.cc.o CMakeFiles/_ost_gfx.dir/export_render_options.cc.o CMakeFiles/_ost_gfx.dir/export_color.cc.o CMakeFiles/_ost_gfx.dir/export_gradient.cc.o CMakeFiles/_ost_gfx.dir/export_color_ops.cc.o CMakeFiles/_ost_gfx.dir/export_glwin_base.cc.o CMakeFiles/_ost_gfx.dir/export_exporter.cc.o CMakeFiles/_ost_gfx.dir/export_bitmap.cc.o CMakeFiles/_ost_gfx.dir/export_map.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_gfx.so.2.9.0 /usr/lib/x86_64-linux-gnu/libpython3.12.so /usr/lib/x86_64-linux-gnu/libboost_python312.so.1.83.0 ../../../stage/lib/libost_conop.so.2.9.0 ../../../stage/lib/libost_db.so.2.9.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_seq.so.2.9.0 ../../../stage/lib/libost_mol.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../stage/lib/libost_img_alg.so.2.9.0 ../../../stage/lib/libost_img.so.2.9.0 ../../../stage/lib/libost_info.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 ../../../stage/lib/libost_base.so.2.9.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libOpenGL.so /usr/lib/x86_64-linux-gnu/libGLX.so /usr/lib/x86_64-linux-gnu/libGLU.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gfx/./__init__.pyc\",\"__init__.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod/py_gfx_obj.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gfx/./py_gfx_obj.pyc\",\"py_gfx_obj.py\",doraise=True)"
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 95%] Built target _ost_gfx
[ 96%] Linking CXX shared module ../../../stage/lib/python3.12/dist-packages/ost/io/_ost_io.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_io.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/_ost_io.dir/link.d -Wl,-z,relro -shared  -o ../../../stage/lib/python3.12/dist-packages/ost/io/_ost_io.so CMakeFiles/_ost_io.dir/wrap_io.cc.o CMakeFiles/_ost_io.dir/export_pdb_io.cc.o CMakeFiles/_ost_io.dir/export_mmcif_io.cc.o CMakeFiles/_ost_io.dir/export_omf_io.cc.o CMakeFiles/_ost_io.dir/export_map_io.cc.o CMakeFiles/_ost_io.dir/export_sdf_io.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_io.so.2.9.0 /usr/lib/x86_64-linux-gnu/libpython3.12.so /usr/lib/x86_64-linux-gnu/libboost_python312.so.1.83.0 ../../../stage/lib/libost_mol_alg.so.2.9.0 ../../../stage/lib/libost_conop.so.2.9.0 ../../../stage/lib/libost_db.so.2.9.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../stage/lib/libost_seq_alg.so.2.9.0 ../../../stage/lib/libost_seq.so.2.9.0 ../../../stage/lib/libost_mol.so.2.9.0 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../stage/lib/libost_img_alg.so.2.9.0 ../../../stage/lib/libost_img.so.2.9.0 ../../../stage/lib/libost_info.so.2.9.0 ../../../stage/lib/libost_base.so.2.9.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/io/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/io/./__init__.pyc\",\"__init__.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/io/pymod/remote.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/io/./remote.pyc\",\"remote.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/io/pymod/repository.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/io/./repository.pyc\",\"repository.py\",doraise=True)"
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 96%] Built target _ost_io
make  -f modules/gui/pymod/CMakeFiles/_ost_gui.dir/build.make modules/gui/pymod/CMakeFiles/_ost_gui.dir/depend
make  -f modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/build.make modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod/CMakeFiles/_ost_gui.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/build.make modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/build
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/gui/pymod/CMakeFiles/_ost_gui.dir/build.make modules/gui/pymod/CMakeFiles/_ost_gui.dir/build
[ 96%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_forcefield.cc.o
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_forcefield.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_forcefield.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_forcefield.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/pymod/export_forcefield.cc
[ 96%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_settings.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_settings.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_settings.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_settings.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/pymod/export_settings.cc
[ 96%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_openmm.cc.o
[ 96%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_simulation.cc.o
[ 96%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_ff_reader.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_openmm.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_openmm.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_openmm.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/pymod/export_openmm.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_simulation.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_simulation.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_simulation.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/pymod/export_simulation.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_ff_reader.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_ff_reader.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_ff_reader.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/pymod/export_ff_reader.cc
[ 96%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_observers.cc.o
[ 96%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/wrap_gui.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_observers.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_observers.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_observers.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/pymod/export_observers.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/wrap_gui.cc.o -MF CMakeFiles/_ost_gui.dir/wrap_gui.cc.o.d -o CMakeFiles/_ost_gui.dir/wrap_gui.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/wrap_gui.cc
[ 97%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_buildingblock.cc.o
[ 97%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_interaction.cc.o
[ 97%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_block_modifiers.cc.o
[ 97%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_message_widget.cc.o
[ 97%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_topology.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_buildingblock.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_buildingblock.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_buildingblock.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/pymod/export_buildingblock.cc
[ 97%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_tool.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_message_widget.cc.o -MF CMakeFiles/_ost_gui.dir/export_message_widget.cc.o.d -o CMakeFiles/_ost_gui.dir/export_message_widget.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_message_widget.cc
[ 97%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/wrap_mol_mm.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_interaction.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_interaction.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_interaction.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/pymod/export_interaction.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_block_modifiers.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_block_modifiers.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_block_modifiers.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/pymod/export_block_modifiers.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_tool.cc.o -MF CMakeFiles/_ost_gui.dir/export_tool.cc.o.d -o CMakeFiles/_ost_gui.dir/export_tool.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_tool.cc
[ 97%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_alignment_view.cc.o
[ 97%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_gl_win.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_topology.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_topology.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_topology.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/pymod/export_topology.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_gl_win.cc.o -MF CMakeFiles/_ost_gui.dir/export_gl_win.cc.o.d -o CMakeFiles/_ost_gui.dir/export_gl_win.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_gl_win.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_alignment_view.cc.o -MF CMakeFiles/_ost_gui.dir/export_alignment_view.cc.o.d -o CMakeFiles/_ost_gui.dir/export_alignment_view.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_alignment_view.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/wrap_mol_mm.cc.o -MF CMakeFiles/_ost_mol_mm.dir/wrap_mol_mm.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/wrap_mol_mm.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/pymod/wrap_mol_mm.cc
[ 97%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_gosty.cc.o
[ 97%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_scene_win.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_gosty.cc.o -MF CMakeFiles/_ost_gui.dir/export_gosty.cc.o.d -o CMakeFiles/_ost_gui.dir/export_gosty.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_gosty.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_scene_win.cc.o -MF CMakeFiles/_ost_gui.dir/export_scene_win.cc.o.d -o CMakeFiles/_ost_gui.dir/export_scene_win.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_scene_win.cc
[ 97%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_py_shell.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_py_shell.cc.o -MF CMakeFiles/_ost_gui.dir/export_py_shell.cc.o.d -o CMakeFiles/_ost_gui.dir/export_py_shell.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_py_shell.cc
[ 97%] Building CXX object modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_modeller.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_mol_mm_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/export_modeller.cc.o -MF CMakeFiles/_ost_mol_mm.dir/export_modeller.cc.o.d -o CMakeFiles/_ost_mol_mm.dir/export_modeller.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/pymod/export_modeller.cc
[ 97%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_sequence_viewer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_sequence_viewer.cc.o -MF CMakeFiles/_ost_gui.dir/export_sequence_viewer.cc.o.d -o CMakeFiles/_ost_gui.dir/export_sequence_viewer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_sequence_viewer.cc
[ 98%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_perspective.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_perspective.cc.o -MF CMakeFiles/_ost_gui.dir/export_perspective.cc.o.d -o CMakeFiles/_ost_gui.dir/export_perspective.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_perspective.cc
[ 98%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_sip_handler.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_sip_handler.cc.o -MF CMakeFiles/_ost_gui.dir/export_sip_handler.cc.o.d -o CMakeFiles/_ost_gui.dir/export_sip_handler.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_sip_handler.cc
[ 98%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_scene_selection.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_scene_selection.cc.o -MF CMakeFiles/_ost_gui.dir/export_scene_selection.cc.o.d -o CMakeFiles/_ost_gui.dir/export_scene_selection.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_scene_selection.cc
[ 98%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_main_area.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_main_area.cc.o -MF CMakeFiles/_ost_gui.dir/export_main_area.cc.o.d -o CMakeFiles/_ost_gui.dir/export_main_area.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_main_area.cc
[ 98%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_panels.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_panels.cc.o -MF CMakeFiles/_ost_gui.dir/export_panels.cc.o.d -o CMakeFiles/_ost_gui.dir/export_panels.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_panels.cc
[ 98%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_menu_bar.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_menu_bar.cc.o -MF CMakeFiles/_ost_gui.dir/export_menu_bar.cc.o.d -o CMakeFiles/_ost_gui.dir/export_menu_bar.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_menu_bar.cc
[ 98%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_file_loader.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_file_loader.cc.o -MF CMakeFiles/_ost_gui.dir/export_file_loader.cc.o.d -o CMakeFiles/_ost_gui.dir/export_file_loader.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_file_loader.cc
[ 98%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_file_viewer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_file_viewer.cc.o -MF CMakeFiles/_ost_gui.dir/export_file_viewer.cc.o.d -o CMakeFiles/_ost_gui.dir/export_file_viewer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_file_viewer.cc
[ 98%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_widget.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_widget.cc.o -MF CMakeFiles/_ost_gui.dir/export_widget.cc.o.d -o CMakeFiles/_ost_gui.dir/export_widget.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_widget.cc
[ 98%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_gl_canvas.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_gl_canvas.cc.o -MF CMakeFiles/_ost_gui.dir/export_gl_canvas.cc.o.d -o CMakeFiles/_ost_gui.dir/export_gl_canvas.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_gl_canvas.cc
[ 98%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/data_viewer_proxy.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/data_viewer_proxy.cc.o -MF CMakeFiles/_ost_gui.dir/data_viewer_proxy.cc.o.d -o CMakeFiles/_ost_gui.dir/data_viewer_proxy.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/data_viewer_proxy.cc
[100%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_data_viewer.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_data_viewer.cc.o -MF CMakeFiles/_ost_gui.dir/export_data_viewer.cc.o.d -o CMakeFiles/_ost_gui.dir/export_data_viewer.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_data_viewer.cc
[100%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_overlay.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_overlay.cc.o -MF CMakeFiles/_ost_gui.dir/export_overlay.cc.o.d -o CMakeFiles/_ost_gui.dir/export_overlay.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_overlay.cc
[100%] Building CXX object modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_overlay_manager.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_PYTHON_DYN_LINK -DBOOST_PYTHON_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -D_ost_gui_EXPORTS -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -I/usr/include/python3.12 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -fPIC -MD -MT modules/gui/pymod/CMakeFiles/_ost_gui.dir/export_overlay_manager.cc.o -MF CMakeFiles/_ost_gui.dir/export_overlay_manager.cc.o.d -o CMakeFiles/_ost_gui.dir/export_overlay_manager.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_overlay_manager.cc
In file included from /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_scene_selection.cc:23:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_node.hh:55:16: warning: 'virtual void ost::gfx::GfxNode::DeepSwap(ost::gfx::GfxNode&)' was hidden [-Woverloaded-virtual=]
   55 |   virtual void DeepSwap(GfxNode& n);
      |                ^~~~~~~~
In file included from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh:38,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/entity.hh:41,
                 from /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/export_scene_selection.cc:24:
/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/gfx_object.hh:58:16: note:   by 'virtual void ost::gfx::GfxObj::DeepSwap(ost::gfx::GfxObj&)'
   58 |   virtual void DeepSwap(GfxObj& go);
      |                ^~~~~~~~
[100%] Linking CXX shared module ../../../stage/lib/python3.12/dist-packages/ost/gui/_ost_gui.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/presets.xml /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/scene/presets.xml
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/icons/color_icon.png /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/scene/icons/color_icon.png
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/icons/preset_icon.png /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/scene/icons/preset_icon.png
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/icons/render_icon.png /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/scene/icons/render_icon.png
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/icons/tool_icon.png /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/share/openstructure/scene/icons/tool_icon.png
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_gui.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/_ost_gui.dir/link.d -Wl,-z,relro -shared  -o ../../../stage/lib/python3.12/dist-packages/ost/gui/_ost_gui.so CMakeFiles/_ost_gui.dir/wrap_gui.cc.o CMakeFiles/_ost_gui.dir/export_alignment_view.cc.o CMakeFiles/_ost_gui.dir/export_message_widget.cc.o CMakeFiles/_ost_gui.dir/export_gl_win.cc.o CMakeFiles/_ost_gui.dir/export_tool.cc.o CMakeFiles/_ost_gui.dir/export_py_shell.cc.o CMakeFiles/_ost_gui.dir/export_gosty.cc.o CMakeFiles/_ost_gui.dir/export_scene_win.cc.o CMakeFiles/_ost_gui.dir/export_sequence_viewer.cc.o CMakeFiles/_ost_gui.dir/export_perspective.cc.o CMakeFiles/_ost_gui.dir/export_sip_handler.cc.o CMakeFiles/_ost_gui.dir/export_scene_selection.cc.o CMakeFiles/_ost_gui.dir/export_main_area.cc.o CMakeFiles/_ost_gui.dir/export_panels.cc.o CMakeFiles/_ost_gui.dir/export_menu_bar.cc.o CMakeFiles/_ost_gui.dir/export_file_loader.cc.o CMakeFiles/_ost_gui.dir/export_file_viewer.cc.o CMakeFiles/_ost_gui.dir/export_widget.cc.o CMakeFiles/_ost_gui.dir/export_gl_canvas.cc.o CMakeFiles/_ost_gui.dir/data_viewer_proxy.cc.o CMakeFiles/_ost_gui.dir/export_data_viewer.cc.o CMakeFiles/_ost_gui.dir/export_overlay.cc.o CMakeFiles/_ost_gui.dir/export_overlay_manager.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../stage/lib/libost_gui.so.2.9.0 /usr/lib/x86_64-linux-gnu/libpython3.12.so /usr/lib/x86_64-linux-gnu/libboost_python312.so.1.83.0 ../../../stage/lib/libost_gfx.so.2.9.0 /usr/lib/x86_64-linux-gnu/libOpenGL.so /usr/lib/x86_64-linux-gnu/libGLX.so /usr/lib/x86_64-linux-gnu/libGLU.so ../../../stage/lib/libost_io.so.2.9.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so ../../../stage/lib/libost_mol_alg.so.2.9.0 ../../../stage/lib/libost_conop.so.2.9.0 ../../../stage/lib/libost_db.so.2.9.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_img_alg.so.2.9.0 ../../../stage/lib/libost_img.so.2.9.0 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../stage/lib/libost_seq_alg.so.2.9.0 ../../../stage/lib/libost_seq.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../stage/lib/libost_mol.so.2.9.0 ../../../stage/lib/libost_info.so.2.9.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 ../../../stage/lib/libost_base.so.2.9.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libparasail.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/__init__.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/__init__.pyc\",\"__init__.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/color_options_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/color_options_widget.pyc\",\"color_options_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/color_select_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/color_select_widget.pyc\",\"color_select_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/combo_options_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/combo_options_widget.pyc\",\"combo_options_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/cpk_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/cpk_widget.pyc\",\"cpk_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/custom_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/custom_widget.pyc\",\"custom_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/gradient_editor_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/gradient_editor_widget.pyc\",\"gradient_editor_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/gradient_info_handler.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/gradient_info_handler.pyc\",\"gradient_info_handler.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/gradient_list_model.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/gradient_list_model.pyc\",\"gradient_list_model.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/gradient_preset_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/gradient_preset_widget.pyc\",\"gradient_preset_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/hsc_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/hsc_widget.pyc\",\"hsc_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/immutable_gradient_info_handler.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/immutable_gradient_info_handler.pyc\",\"immutable_gradient_info_handler.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/immutable_preset_info_handler.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/immutable_preset_info_handler.pyc\",\"immutable_preset_info_handler.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/init_inspector.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/init_inspector.pyc\",\"init_inspector.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/inspector_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/inspector_widget.pyc\",\"inspector_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/map_level_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/map_level_widget.pyc\",\"map_level_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/preset.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/preset.pyc\",\"preset.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/remote.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/remote.pyc\",\"remote.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/preset_editor_list_model.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/preset_editor_list_model.pyc\",\"preset_editor_list_model.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/preset_editor_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/preset_editor_widget.pyc\",\"preset_editor_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/preset_info_handler.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/preset_info_handler.pyc\",\"preset_info_handler.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/preset_list_model.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/preset_list_model.pyc\",\"preset_list_model.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/preset_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/preset_widget.pyc\",\"preset_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/render_mode_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/render_mode_widget.pyc\",\"render_mode_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/render_op.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/render_op.pyc\",\"render_op.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/render_options_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/render_options_widget.pyc\",\"render_options_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/scene_observer_impl.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/scene_observer_impl.pyc\",\"scene_observer_impl.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/scene_selection_helper.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/scene_selection_helper.pyc\",\"scene_selection_helper.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/simple_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/simple_widget.pyc\",\"simple_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/sline_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/sline_widget.pyc\",\"sline_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/toolbar_options_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/toolbar_options_widget.pyc\",\"toolbar_options_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/trace_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/trace_widget.pyc\",\"trace_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/tube_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/tube_widget.pyc\",\"tube_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/uniform_color_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/uniform_color_widget.pyc\",\"uniform_color_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/visibility_op.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/visibility_op.pyc\",\"visibility_op.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/line_trace_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/line_trace_widget.pyc\",\"line_trace_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/wireframe_widget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/wireframe_widget.pyc\",\"wireframe_widget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/scene/query_editor.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/scene/query_editor.pyc\",\"query_editor.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/dng/__init__.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/dng/__init__.pyc\",\"__init__.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/dng/termuse.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/dng/termuse.pyc\",\"termuse.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/dng/superpositiondialog.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/dng/superpositiondialog.pyc\",\"superpositiondialog.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/dng/init.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/dng/init.pyc\",\"init.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/dng/menu.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/dng/menu.pyc\",\"menu.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/./__init__.pyc\",\"__init__.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/init_context_menu.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/./init_context_menu.pyc\",\"init_context_menu.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/init_menubar.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/./init_menubar.pyc\",\"init_menubar.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/init_spacenav.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/./init_spacenav.pyc\",\"init_spacenav.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/init_splash.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/./init_splash.pyc\",\"init_splash.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/trajectory_viewer.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/./trajectory_viewer.pyc\",\"trajectory_viewer.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/helpwidget.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/./helpwidget.pyc\",\"helpwidget.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/table.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/./table.pyc\",\"table.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/gui/pymod/gosty_startup.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/gui/./gosty_startup.pyc\",\"gosty_startup.py\",doraise=True)"
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] Built target _ost_gui
make  -f scripts/CMakeFiles/ost_scripts.dir/build.make scripts/CMakeFiles/ost_scripts.dir/depend
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/scripts /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts/CMakeFiles/ost_scripts.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f scripts/CMakeFiles/ost_scripts.dir/build.make scripts/CMakeFiles/ost_scripts.dir/build
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -E copy_if_different ost_config /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/openstructure/libexec/ost_config
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -E copy_if_different ost /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/bin/ost
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -E copy_if_different dng /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/bin/dng
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -E copy_if_different ost_startup.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/ost_startup.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/scripts/dng_startup.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/dng_startup.py
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] Built target ost_scripts
[100%] Linking CXX shared module ../../../../stage/lib/python3.12/dist-packages/ost/mol/mm/_ost_mol_mm.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/cmake -E cmake_link_script CMakeFiles/_ost_mol_mm.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,--dependency-file,CMakeFiles/_ost_mol_mm.dir/link.d -Wl,-z,relro -shared  -o ../../../../stage/lib/python3.12/dist-packages/ost/mol/mm/_ost_mol_mm.so CMakeFiles/_ost_mol_mm.dir/export_forcefield.cc.o CMakeFiles/_ost_mol_mm.dir/export_settings.cc.o CMakeFiles/_ost_mol_mm.dir/export_simulation.cc.o CMakeFiles/_ost_mol_mm.dir/export_openmm.cc.o CMakeFiles/_ost_mol_mm.dir/export_observers.cc.o CMakeFiles/_ost_mol_mm.dir/export_ff_reader.cc.o CMakeFiles/_ost_mol_mm.dir/export_interaction.cc.o CMakeFiles/_ost_mol_mm.dir/export_buildingblock.cc.o CMakeFiles/_ost_mol_mm.dir/export_block_modifiers.cc.o CMakeFiles/_ost_mol_mm.dir/export_topology.cc.o CMakeFiles/_ost_mol_mm.dir/export_modeller.cc.o CMakeFiles/_ost_mol_mm.dir/wrap_mol_mm.cc.o   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib: ../../../../stage/lib/libost_mol_mm.so.2.9.0 /usr/lib/x86_64-linux-gnu/libpython3.12.so /usr/lib/x86_64-linux-gnu/libboost_python312.so.1.83.0 ../../../../stage/lib/libost_io.so.2.9.0 ../../../../stage/lib/libost_mol_alg.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 ../../../../stage/lib/libost_conop.so.2.9.0 ../../../../stage/lib/libost_db.so.2.9.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../../stage/lib/libost_seq_alg.so.2.9.0 ../../../../stage/lib/libost_seq.so.2.9.0 ../../../../stage/lib/libost_mol.so.2.9.0 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../../stage/lib/libost_img_alg.so.2.9.0 ../../../../stage/lib/libost_img.so.2.9.0 ../../../../stage/lib/libost_info.so.2.9.0 ../../../../stage/lib/libost_base.so.2.9.0 ../../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libOpenMM.so
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/mm/pymod/__init__.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/mm/./__init__.pyc\",\"__init__.py\",doraise=True)"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod && /usr/bin/python3 -c "import py_compile;py_compile.compile(\"/build/reproducible-path/openstructure-2.9.0/modules/mol/mm/pymod/antechamber.py\",\"/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/mol/mm/./antechamber.pyc\",\"antechamber.py\",doraise=True)"
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] Built target _ost_mol_mm
make[2]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/CMakeFiles 0
make[1]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
   dh_auto_test
	cd obj-x86_64-linux-gnu && make -j20 check ARGS\+=--verbose ARGS\+=-j20
make[1]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
/usr/bin/cmake -S/build/reproducible-path/openstructure-2.9.0 -B/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 check
make[2]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
/usr/bin/cmake -S/build/reproducible-path/openstructure-2.9.0 -B/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/CMakeFiles 94
make  -f CMakeFiles/Makefile2 CMakeFiles/check.dir/all
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f scripts/CMakeFiles/subst_ost_startup.py.dir/build.make scripts/CMakeFiles/subst_ost_startup.py.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/scripts /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts/CMakeFiles/subst_ost_startup.py.dir/DependInfo.cmake "--color="
make  -f modules/base/src/CMakeFiles/create_stage.dir/build.make modules/base/src/CMakeFiles/create_stage.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src/CMakeFiles/create_stage.dir/DependInfo.cmake "--color="
make  -f scripts/CMakeFiles/subst_ost_config.dir/build.make scripts/CMakeFiles/subst_ost_config.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f scripts/CMakeFiles/subst_ost.dir/build.make scripts/CMakeFiles/subst_ost.dir/depend
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/scripts /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts/CMakeFiles/subst_ost_config.dir/DependInfo.cmake "--color="
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f scripts/CMakeFiles/subst_dng.dir/build.make scripts/CMakeFiles/subst_dng.dir/depend
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/scripts /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts/CMakeFiles/subst_ost.dir/DependInfo.cmake "--color="
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/scripts /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts/CMakeFiles/subst_dng.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f scripts/CMakeFiles/subst_ost_startup.py.dir/build.make scripts/CMakeFiles/subst_ost_startup.py.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -DINPUT_FILE=/build/reproducible-path/openstructure-2.9.0/scripts/ost_startup.py.in -DOUT_FILE=ost_startup.py -DBUILD_TYPE=Release -DPython_EXECUTABLE=/usr/bin/python3 -DPython_VERSION=3.12.7 -DLIBDIR=lib -DLIBEXEC_PATH=lib/openstructure/libexec -DPYTHON_MODULE_PATH=python3.12/dist-packages/ -P /build/reproducible-path/openstructure-2.9.0/cmake_support/substitute.cmake
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/base/src/CMakeFiles/create_stage.dir/build.make modules/base/src/CMakeFiles/create_stage.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E make_directory /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib
make  -f scripts/CMakeFiles/subst_ost.dir/build.make scripts/CMakeFiles/subst_ost.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -DINPUT_FILE=/build/reproducible-path/openstructure-2.9.0/scripts/ost.in -DOUT_FILE=ost -DBUILD_TYPE=Release -DPython_EXECUTABLE=/usr/bin/python3 -DPython_VERSION=3.12.7 -DLIBDIR=lib -DLIBEXEC_PATH=lib/openstructure/libexec -DPYTHON_MODULE_PATH=python3.12/dist-packages/ -P /build/reproducible-path/openstructure-2.9.0/cmake_support/substitute.cmake
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f scripts/CMakeFiles/subst_ost_config.dir/build.make scripts/CMakeFiles/subst_ost_config.dir/build
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -DINPUT_FILE=/build/reproducible-path/openstructure-2.9.0/scripts/ost_config.in -DOUT_FILE=ost_config -DBUILD_TYPE=Release -DPython_EXECUTABLE=/usr/bin/python3 -DPython_VERSION=3.12.7 -DLIBDIR=lib -DLIBEXEC_PATH=lib/openstructure/libexec -DPYTHON_MODULE_PATH=python3.12/dist-packages/ -P /build/reproducible-path/openstructure-2.9.0/cmake_support/substitute.cmake
make  -f scripts/CMakeFiles/subst_dng.dir/build.make scripts/CMakeFiles/subst_dng.dir/build
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -DINPUT_FILE=/build/reproducible-path/openstructure-2.9.0/scripts/dng.in -DOUT_FILE=dng -DBUILD_TYPE=Release -DPython_EXECUTABLE=/usr/bin/python3 -DPython_VERSION=3.12.7 -DLIBDIR=lib -DLIBEXEC_PATH=lib/openstructure/libexec -DPYTHON_MODULE_PATH=python3.12/dist-packages/ -P /build/reproducible-path/openstructure-2.9.0/cmake_support/substitute.cmake
[  0%] Built target subst_ost_startup.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E make_directory /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/bin
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[  0%] Built target subst_ost_config
[  0%] Built target subst_dng
[  0%] Built target subst_ost
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E make_directory /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/openstructure/libexec
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E make_directory /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/tests
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[  0%] Built target create_stage
make  -f modules/seq/alg/src/CMakeFiles/ost_seq_alg_headers.dir/build.make modules/seq/alg/src/CMakeFiles/ost_seq_alg_headers.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src/CMakeFiles/ost_seq_alg_headers.dir/DependInfo.cmake "--color="
make  -f modules/geom/src/CMakeFiles/ost_geom_headers.dir/build.make modules/geom/src/CMakeFiles/ost_geom_headers.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/geom/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src/CMakeFiles/ost_geom_headers.dir/DependInfo.cmake "--color="
make  -f modules/config/CMakeFiles/ost_config_headers.dir/build.make modules/config/CMakeFiles/ost_config_headers.dir/depend
make  -f modules/base/src/CMakeFiles/ost_base_headers.dir/build.make modules/base/src/CMakeFiles/ost_base_headers.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/config /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/config /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/config/CMakeFiles/ost_config_headers.dir/DependInfo.cmake "--color="
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/info/src/CMakeFiles/ost_info_headers.dir/build.make modules/info/src/CMakeFiles/ost_info_headers.dir/depend
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src/CMakeFiles/ost_base_headers.dir/DependInfo.cmake "--color="
make  -f modules/mol/base/src/CMakeFiles/ost_mol_headers.dir/build.make modules/mol/base/src/CMakeFiles/ost_mol_headers.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/info/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src/CMakeFiles/ost_info_headers.dir/DependInfo.cmake "--color="
make  -f modules/seq/base/src/CMakeFiles/ost_seq_headers.dir/build.make modules/seq/base/src/CMakeFiles/ost_seq_headers.dir/depend
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/seq/alg/src/CMakeFiles/ost_seq_alg_headers.dir/build.make modules/seq/alg/src/CMakeFiles/ost_seq_alg_headers.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./alignment_opts.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./alignment_opts.hh
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/conop/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src/CMakeFiles/ost_conop_headers.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/db/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src/CMakeFiles/ost_db_headers.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/gfx/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src/CMakeFiles/ost_gfx_headers.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/impl/sequence_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/impl/sequence_impl.hh
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/img/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src/CMakeFiles/ost_img_headers.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/db/src/./sqlite_wrap.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/db/./sqlite_wrap.hh
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./clip_alignment.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./clip_alignment.hh
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info.hh
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/pointer_iterator.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/pointer_iterator.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/db/src/./sqlite_conv.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/db/./sqlite_conv.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./def.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./def.hh
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/map_iso_gen.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/map_iso_gen.hh
make  -f modules/img/base/src/CMakeFiles/ost_img_headers.dir/build.make modules/img/base/src/CMakeFiles/ost_img_headers.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/impl/sequence_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/impl/sequence_impl_fw.hh
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/raster_image/raster_image.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/raster_image/raster_image.hh
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/gui/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/CMakeFiles/ost_gui_headers.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./conservation.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./conservation.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./anisotropic.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./anisotropic.hh
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/io/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src/CMakeFiles/ost_io_headers.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./exc.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./exc.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./processor.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./processor.hh
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src/CMakeFiles/ost_mol_alg_headers.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/map_iso_gen_s.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/map_iso_gen_s.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/export_helper/pair_to_tuple_conv.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/export_helper/pair_to_tuple_conv.hh
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/bindings/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/src/CMakeFiles/ost_bindings_headers.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src/CMakeFiles/ost_mol_mm_headers.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/db/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/db/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/impl/sequence_list_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/impl/sequence_list_impl_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./auto_correlate.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./auto_correlate.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_error.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_error.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/map_iso_gen_s.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/map_iso_gen_s.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/alg/src/CMakeFiles/ost_mol_alg_headers.dir/build.make modules/mol/alg/src/CMakeFiles/ost_mol_alg_headers.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./svd_superpose.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./svd_superpose.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/export_helper/vec_to_list_conv.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/export_helper/vec_to_list_conv.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/dispatch.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/dispatch.hh
make  -f modules/io/src/CMakeFiles/ost_io_headers.dir/build.make modules/io/src/CMakeFiles/ost_io_headers.dir/build
make  -f modules/gui/src/CMakeFiles/ost_gui_headers.dir/build.make modules/gui/src/CMakeFiles/ost_gui_headers.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/chemdict_parser.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/chemdict_parser.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./contact_prediction_score.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./contact_prediction_score.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./geom.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./geom.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/db/src/./linear_indexer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/db/./linear_indexer.hh
make  -f modules/bindings/src/CMakeFiles/ost_bindings_headers.dir/build.make modules/bindings/src/CMakeFiles/ost_bindings_headers.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./amino_acids.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./amino_acids.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/bindings/src/./wrap_tmalign.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/bindings/./wrap_tmalign.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/atom_group.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/atom_group.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/test_utils/compare_files.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/test_utils/compare_files.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/config && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/config/./version.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./version.hh
make  -f modules/mol/mm/src/CMakeFiles/ost_mol_mm_headers.dir/build.make modules/mol/mm/src/CMakeFiles/ost_mol_mm_headers.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./contact_weight_matrix.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./contact_weight_matrix.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./forcefield.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./forcefield.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./mat.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./mat.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/impl/sequence_list_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/impl/sequence_list_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/star_parser.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/star_parser.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./clear.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./clear.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/atom_prop.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/atom_prop.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_impl.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./diag.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./diag.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/map_iso_spec.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/map_iso_spec.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool_option_group.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_option_group.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./sec_structure_segments.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./sec_structure_segments.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./generic_property.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./generic_property.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./mat2.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./mat2.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./ff_reader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./ff_reader.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/db/src/./binary_container.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/db/./binary_container.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_impl_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/star_writer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/star_writer.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./clip_min_max.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./clip_min_max.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./model_check.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./model_check.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/atom_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/atom_impl.hh
[  0%] Built target ost_bindings_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/impl/sequence_list_iterator.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/impl/sequence_list_iterator.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/map_octree.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/map_octree.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./integrity_error.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./integrity_error.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./mat3.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./mat3.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./buildingblock.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./buildingblock.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/atom_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/atom_impl_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./local_dist_diff_test.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./local_dist_diff_test.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/mmcif_reader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/mmcif_reader.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/octree_isocont.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/octree_isocont.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./distance_map.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./distance_map.hh
[  0%] Built target ost_config_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./heuristic.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./heuristic.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./invalid_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./invalid_handle.hh
make  -f modules/config/CMakeFiles/ost_config.dir/build.make modules/config/CMakeFiles/ost_config.dir/depend
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_base.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/db/src/./extract_data_helper.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/db/./extract_data_helper.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./block_modifiers.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./block_modifiers.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/config /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/config /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/config/CMakeFiles/ost_config.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./conjugate.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./conjugate.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/mmcif_info.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/mmcif_info.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./mat4.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./mat4.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool_options.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_options.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/cartoon_renderer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/cartoon_renderer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./distance_test_common.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./distance_test_common.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/chain_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/chain_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./sequence_list.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./sequence_list.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./entropy.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./entropy.hh
make  -f modules/config/CMakeFiles/ost_config.dir/build.make modules/config/CMakeFiles/ost_config.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./compound.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./compound.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/config/CMakeFiles/ost_config.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool_bar.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_bar.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./ptr_observer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./ptr_observer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/custom_renderer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/custom_renderer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_group.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_group.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/mmcif_writer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/mmcif_writer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./compound_lib.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./compound_lib.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./gromacs_block_modifiers.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./gromacs_block_modifiers.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./vec.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./vec.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/chain_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/chain_impl_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./sequence_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./sequence_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./global_align.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./global_align.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./log.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./log.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_base_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_base_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/cpk_renderer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/cpk_renderer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./convolute.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./convolute.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./distance_rmsd_test.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./distance_rmsd_test.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/selection_tool.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/selection_tool.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/io_profile.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/io_profile.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./alignment_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./alignment_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/connector_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/connector_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_def.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_def.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./vec2.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./vec2.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./heuristic_block_modifiers.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./heuristic_block_modifiers.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./correlate.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./correlate.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./superpose_frames.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./superpose_frames.hh
[  0%] Built target ost_db_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/dcd_io.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/dcd_io.hh
[  0%] Built target ost_config
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./log_sink.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./log_sink.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/debug_renderer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/debug_renderer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/connector_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/connector_impl_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_item.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_item.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./filter_clashes.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./filter_clashes.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./rule_based.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./rule_based.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./interaction.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./interaction.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./vec3.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./vec3.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_factory.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_factory.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./cross_correlate.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./cross_correlate.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./profile.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./profile.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/measure_tool.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/measure_tool.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./sequence_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./sequence_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_crd_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_crd_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_frequency_domain.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_frequency_domain.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./settings.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./settings.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./vec4.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./vec4.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./ins_del.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./ins_del.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/simple_renderer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/simple_renderer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/dihedral.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/dihedral.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./construct_cbeta.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./construct_cbeta.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./aligned_region.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./aligned_region.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./dyn_cast.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./dyn_cast.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool_option.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_option.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./density_slice.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./density_slice.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_half_frequency_domain.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_half_frequency_domain.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./minimal_compound_lib.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./minimal_compound_lib.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_pqr_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_pqr_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./vecmat_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./vecmat_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./local_align.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./local_align.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./aligned_column.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./aligned_column.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_mae_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_mae_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./clash_score.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./clash_score.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./dft.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./dft.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./stdint.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./stdint.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/entity_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/entity_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool_manager.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_manager.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./merge_pairwise_alignments.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./merge_pairwise_alignments.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_mmcif_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_mmcif_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./simulation.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./simulation.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./vecmat2_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./vecmat2_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/sline_renderer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/sline_renderer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./modeller.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./modeller.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_path.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_path.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./stdint_msc.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./stdint_msc.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./compound_lib_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./compound_lib_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_spatial_domain.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_spatial_domain.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./trajectory_analysis.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./trajectory_analysis.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./observer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./observer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool_options_widget.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_options_widget.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/entity_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/entity_impl_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_set.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_set.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./fft.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./fft.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./aligned_column_iterator.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./aligned_column_iterator.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./vecmat3_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./vecmat3_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/trace_renderer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/trace_renderer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./state_extractor.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./state_extractor.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/conop/src/./ring_finder.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/conop/./ring_finder.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./range.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./range.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./structure_analysis.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./structure_analysis.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./fftw_helper.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./fftw_helper.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./system_creator.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./system_creator.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./invalid_sequence.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./invalid_sequence.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./vecmat4_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./vecmat4_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/pdb_reader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/pdb_reader.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./pair_subst_weight_matrix.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./pair_subst_weight_matrix.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./consistency_checks.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./consistency_checks.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/manipulator.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/manipulator.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_visitor.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_visitor.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_visitor.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_visitor.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./views_from_sequences.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./views_from_sequences.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/line_trace_renderer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/line_trace_renderer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./topology_creator.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./topology_creator.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./fill.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./fill.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./units.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./units.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/fragment_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/fragment_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/tool_options_win.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/tool_options_win.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./semiglobal_align.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./semiglobal_align.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./circular_iterator.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./circular_iterator.hh
[  0%] Built target ost_conop_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./index.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./index.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./info_verbose_visitor.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./info_verbose_visitor.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_pdb_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_pdb_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./filter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./filter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./pdbize.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./pdbize.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src/./profile_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/./profile_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/backbone_trace.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/backbone_trace.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/fragment_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/fragment_impl_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_algorithm.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_algorithm.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./message.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./message.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./constants.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./constants.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./sequence_identity.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./sequence_identity.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./topology.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./topology.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./adjacency_bitmap.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./adjacency_bitmap.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/mouse_event.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/mouse_event.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/pdb_writer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/pdb_writer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/image_state_visitor_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/image_state_visitor_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./composite.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./platform.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./platform.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/query_ast.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/query_ast.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./item_type.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./item_type.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/index.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/index.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./fourier_filters.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./fourier_filters.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/tools/map_tool.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/tools/map_tool.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src/./steep.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mm/./steep.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/entity_io_sdf_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/entity_io_sdf_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./sequence_similarity.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./sequence_similarity.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/query_ast_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/query_ast_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./consistency_checks.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./consistency_checks.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/entity_detail.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_detail.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./geom_info_conversion.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./geom_info_conversion.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./composite2.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite2.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/align_properties_painter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/align_properties_painter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./gaussian_gradient_magnitude.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./gaussian_gradient_magnitude.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/query_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/query_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./string_ref.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./string_ref.hh
[  0%] Built target ost_seq_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./subst_weight_matrix.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./subst_weight_matrix.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./contact_overlap.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./contact_overlap.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/sdf_reader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/sdf_reader.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/type_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/type_fw.hh
[  0%] Built target ost_mol_mm_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/entity_renderer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./gaussian.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./gaussian.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/info/src/./item_type_cast.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/info/./item_type_cast.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/query_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/query_impl_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./domain_find.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./domain_find.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/base_row.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/base_row.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./composite3.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite3.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/image_state/value_holder.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/image_state/value_holder.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/trace_renderer_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/trace_renderer_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/sdf_writer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/sdf_writer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./gaussian_laplacian.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./gaussian_laplacian.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./variance_map.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./variance_map.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./pod_vector.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./pod_vector.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/background_painter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/background_painter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./similarity_matrix.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./similarity_matrix.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./algorithm.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./algorithm.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./composite_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./accessibility.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./accessibility.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/save_entity.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/save_entity.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/residue_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/residue_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./data/default_contact_weight_matrix.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./default_contact_weight_matrix.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./highest_peak_search_3d.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./highest_peak_search_3d.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/connect_renderer_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/connect_renderer_base.hh
[  0%] Built target ost_info_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./fixed_string.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./fixed_string.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./circle_mask.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./circle_mask.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/conservation_painter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/conservation_painter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./sec_struct.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./sec_struct.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/residue_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/residue_impl_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./composite_mask.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./composite_mask.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./composite2_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite2_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/load_entity.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/load_entity.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./histogram.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./histogram.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./tri_matrix.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./tri_matrix.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./data_algorithm.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./data_algorithm.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./data/default_pair_subst_weight_matrix.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./default_pair_subst_weight_matrix.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/painter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/painter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./nonstandard.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./nonstandard.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/surface_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/surface_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./line_iterator.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./line_iterator.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./composite3_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./composite3_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./boost_filesystem_helper.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./boost_filesystem_helper.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/surface_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/surface_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/mapped_property.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/mapped_property.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/secstr_row.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/secstr_row.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./data_observer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./data_observer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/base/src/./paged_array.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/./paged_array.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/seq_secstr_painter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/seq_secstr_painter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./hmm_pseudo_counts.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./hmm_pseudo_counts.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./molck.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./molck.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/load_surface.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/load_surface.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./aligned_cuboid.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./aligned_cuboid.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/surface_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/surface_impl_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./local_sigma_threshold.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./local_sigma_threshold.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./data_types.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./data_types.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/entity_renderer_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/entity_renderer_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./vec_mat_predicates.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./vec_mat_predicates.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/seq_selection_painter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/seq_selection_painter.hh
[  0%] Built target ost_base_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./hmm_score.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./hmm_score.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./find_membrane.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./find_membrane.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./mask_image.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./mask_image.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/torsion_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/torsion_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/surface_io_msms_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/surface_io_msms_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./data.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./data.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./negate.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./negate.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./quat.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./quat.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/seq_text_painter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/seq_text_painter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/tabulated_trig.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/tabulated_trig.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./entity_to_density.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./entity_to_density.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./debug.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./debug.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/impl/torsion_impl_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/impl/torsion_impl_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/src/./wrap_parasail.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/seq/alg/./wrap_parasail.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./transform.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./transform.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./normalizer_factory.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./normalizer_factory.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_delegate.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_delegate.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/impl/fast_spheres.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/impl/fast_spheres.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/pdb_str.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/pdb_str.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./biounit.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./biounit.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./atom_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./atom_base.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./dllexport.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./dllexport.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./norm.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./norm.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/render_options.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/render_options.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_model.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_model.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/sdf_str.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/sdf_str.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src/./gdt.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/alg/./gdt.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./point_cloud.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./point_cloud.hh
[  0%] Built target ost_seq_alg_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/line_render_options.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/line_render_options.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./atom_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./atom_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./extent_iterator.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./extent_iterator.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_row.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_row.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./normalizer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./normalizer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/mmcif_str.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/mmcif_str.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/geom/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/geom/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./extent_mask.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./extent_mask.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./atom_view.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./atom_view.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/stereochemical_params_reader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/stereochemical_params_reader.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/custom_render_options.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/custom_render_options.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_search_bar.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_search_bar.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./norm_linear.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./norm_linear.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./extent.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./extent.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./bond_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./bond_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/mol/omf.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/mol/omf.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_table_view.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_table_view.hh
[  0%] Built target ost_geom_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./norm_log.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./norm_log.hh
[  0%] Built target ost_mol_alg_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/cpk_render_options.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/cpk_render_options.hh
make  -f modules/geom/src/CMakeFiles/ost_geom.dir/build.make modules/geom/src/CMakeFiles/ost_geom.dir/depend
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./bond_table.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./bond_table.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./image_factory.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./image_factory.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/geom/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/src/CMakeFiles/ost_geom.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./norm_od.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./norm_od.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/simple_render_options.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/simple_render_options.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./chain_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./chain_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/load_map.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/load_map.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_viewer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_viewer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./image_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./image_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/sline_render_options.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/sline_render_options.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./chain_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./chain_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_df3_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_df3_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./power_spectrum.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./power_spectrum.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/tick_painter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/tick_painter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./image_handle_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./image_handle_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/line_trace_render_options.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/line_trace_render_options.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./randomize.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./randomize.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/image_format.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/image_format.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./image_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./image_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/title_row.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/title_row.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./chain_view.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./chain_view.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/cartoon_render_options.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/cartoon_render_options.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./smooth_mask_image.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./smooth_mask_image.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/alignment_view_object.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/alignment_view_object.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./image_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./image_impl.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./stat.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./stat.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_dx_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_dx_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./chain_type.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./chain_type.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/render_options/trace_render_options.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/render_options/trace_render_options.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./image_list.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./image_list.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/base_view_object.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/base_view_object.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./stat_accumulator.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./stat_accumulator.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_spi_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_spi_handler.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/geom/src/CMakeFiles/ost_geom.dir/build.make modules/geom/src/CMakeFiles/ost_geom.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./chem_class.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./chem_class.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./stat_min_max.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./stat_min_max.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./image_state_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./image_state_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_situs_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_situs_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/sequence_viewer/sequence_view_object.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/sequence_viewer/sequence_view_object.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/color_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/color_op.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/geom/src/CMakeFiles/ost_geom.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./threshold.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./threshold.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./chem_type.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./chem_type.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/main_thread_runner.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/main_thread_runner.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./image_state.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./image_state.hh
[  1%] Built target ost_geom
make  -f modules/base/src/CMakeFiles/ost_base.dir/build.make modules/base/src/CMakeFiles/ost_base.dir/depend
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_handler.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/geom/pymod/CMakeFiles/_ost_geom.dir/build.make modules/geom/pymod/CMakeFiles/_ost_geom.dir/depend
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/src/CMakeFiles/ost_base.dir/DependInfo.cmake "--color="
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/geom/tests/CMakeFiles/ost_geom_tests.dir/build.make modules/geom/tests/CMakeFiles/ost_geom_tests.dir/depend
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./coord_group.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./coord_group.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/geom/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/pymod/CMakeFiles/_ost_geom.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./transcendentals.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./transcendentals.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/by_element_color_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/by_element_color_op.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/geom/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/tests/CMakeFiles/ost_geom_tests.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_mrc_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_mrc_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./image.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./image.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./transform.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./transform.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/output_redirector.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/output_redirector.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./inverted_mask.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./inverted_mask.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./coord_source.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./coord_source.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/by_chain_color_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/by_chain_color_op.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/geom/tests/CMakeFiles/ost_geom_tests.dir/build.make modules/geom/tests/CMakeFiles/ost_geom_tests.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_dat_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_dat_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./transform_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./transform_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/completer_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/completer_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./in_mem_coord_source.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./in_mem_coord_source.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/uniform_color_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/uniform_color_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./map.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./map.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./alg_transform.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./alg_transform.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/base/src/CMakeFiles/ost_base.dir/build.make modules/base/src/CMakeFiles/ost_base.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_ipl_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_ipl_handler.hh
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_composite3.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_composite3.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_composite3.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/tests/test_composite3.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_mat2.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_mat2.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_mat2.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/tests/test_mat2.cc
[  2%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_op4.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_mat3.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_mat3.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_mat3.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/tests/test_mat3.cc
[  2%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_mat4.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_op3.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_op3.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_op3.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/tests/test_op3.cc
[  2%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_composite2.cc.o
[  2%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_op2.cc.o
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/base/src/CMakeFiles/ost_base.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_mat4.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_mat4.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_mat4.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/tests/test_mat4.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./coord_frame.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./coord_frame.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_jpk_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_jpk_handler.hh
[  2%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_vec2.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/dir_model.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/dir_model.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/gradient_color_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/gradient_color_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_composite2.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_composite2.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_composite2.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/tests/test_composite2.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./mask_base_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./mask_base_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_op2.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_op2.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_op2.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/tests/test_op2.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_op4.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_op4.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_op4.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/tests/test_op4.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./alg_mirror.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./alg_mirror.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_vec2.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_vec2.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_vec2.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/tests/test_vec2.cc
[  2%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_quat.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/gutter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/gutter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./mask_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./mask_base.hh
[  3%] Built target ost_base
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_quat.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_quat.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_quat.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/tests/test_quat.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_nanoscope_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_nanoscope_handler.hh
make  -f modules/info/src/CMakeFiles/ost_info.dir/build.make modules/info/src/CMakeFiles/ost_info.dir/depend
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./editor_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./editor_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/entity_view_color_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/entity_view_color_op.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/info/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/src/CMakeFiles/ost_info.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/path_completer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/path_completer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./alg_shift.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./alg_shift.hh
[  3%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_vec3.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_vec3.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_vec3.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_vec3.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/tests/test_vec3.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./mask_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./mask_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./editor_type_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./editor_type_fw.hh
[  3%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_vec4.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/basic_gradient_color_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/basic_gradient_color_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_png_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_png_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_context_parser.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_context_parser.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_vec4.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_vec4.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_vec4.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/tests/test_vec4.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./discrete_shrink.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./discrete_shrink.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./mask_visitor.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./mask_visitor.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_completer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_completer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./mol.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./mol.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_dm3_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_dm3_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/gradient_level_color_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/gradient_level_color_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./transformation_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./transformation_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./entity_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./mask.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./mask.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/geom/pymod/CMakeFiles/_ost_geom.dir/build.make modules/geom/pymod/CMakeFiles/_ost_geom.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/color_ops/map_handle_color_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/color_ops/map_handle_color_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_shell.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_shell.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/map_io_tiff_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/map_io_tiff_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./transformations.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./transformations.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/info/src/CMakeFiles/ost_info.dir/build.make modules/info/src/CMakeFiles/ost_info.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./entity_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./render_pass.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./render_pass.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_shell_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_shell_fw.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/geom/pymod/CMakeFiles/_ost_geom.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/tiff_util.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/tiff_util.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./fractional_shift.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./fractional_shift.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/info/src/CMakeFiles/ost_info.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./normalizer_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./normalizer_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_shell_widget.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_shell_widget.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./bitmap_io.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./bitmap_io.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/img/jpk_util.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/img/jpk_util.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./entity_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_handle.hh
[  5%] Built target _ost_geom
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./normalizer_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./normalizer_impl.hh
[  6%] Built target ost_info
make  -f modules/base/pymod/CMakeFiles/_ost_base.dir/build.make modules/base/pymod/CMakeFiles/_ost_base.dir/depend
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_tokenizer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_tokenizer.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/base/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/pymod/CMakeFiles/_ost_base.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./collada_exporter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./collada_exporter.hh
[  6%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_transform.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/sequence_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/seq/sequence_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/test_transform.cc.o -MF CMakeFiles/ost_geom_tests.dir/test_transform.cc.o.d -o CMakeFiles/ost_geom_tests.dir/test_transform.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/tests/test_transform.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./polar.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./polar.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./null_data.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./null_data.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./entity_observer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_observer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_syntax_highlighter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_syntax_highlighter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./color.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./color.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./line_average.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./line_average.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/fasta_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/seq/fasta_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./observable.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./observable.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/base/pymod/CMakeFiles/_ost_base.dir/build.make modules/base/pymod/CMakeFiles/_ost_base.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/text_logger.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/text_logger.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./entity.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./entity.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./entity_observer_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_observer_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src/./rscrosscorr.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/alg/./rscrosscorr.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/pir_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/seq/pir_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./paste_impl.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./paste_impl.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/base/pymod/CMakeFiles/_ost_base.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./entity_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./entity_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_interpreter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_interpreter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/promod_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/seq/promod_io_handler.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./peak.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./peak.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./entity_property_mapper.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_property_mapper.hh
[  6%] Built target _ost_base
make  -f modules/info/pymod/CMakeFiles/_ost_info.dir/build.make modules/info/pymod/CMakeFiles/_ost_info.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/info/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/info/pymod/CMakeFiles/_ost_info.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gl_helper.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gl_helper.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_interpreter_worker.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_interpreter_worker.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/profile_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/seq/profile_io_handler.hh
[  6%] Built target ost_img_alg_headers
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./entity_view.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_view.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./phase.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./phase.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gfx.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/python_shell_text_document_layout.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/python_shell_text_document_layout.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./entity_visitor.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_visitor.hh
[  7%] Building CXX object modules/geom/tests/CMakeFiles/ost_geom_tests.dir/tests.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/hhm_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/seq/hhm_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -MD -MT modules/geom/tests/CMakeFiles/ost_geom_tests.dir/tests.cc.o -MF CMakeFiles/ost_geom_tests.dir/tests.cc.o.d -o CMakeFiles/ost_geom_tests.dir/tests.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/geom/tests/tests.cc
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gfx_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./physical_units.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./physical_units.hh
make  -f modules/info/pymod/CMakeFiles/_ost_info.dir/build.make modules/info/pymod/CMakeFiles/_ost_info.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/shell_history.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/shell_history.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/info/pymod/CMakeFiles/_ost_info.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./entity_visitor_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./entity_visitor_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/pssm_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/seq/pssm_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gfx_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_node.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./handle_type_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./handle_type_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/state_machine.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/state_machine.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./pixel_sampling.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./pixel_sampling.hh
[  7%] Built target _ost_info
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./point_list.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./point_list.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gfx_node_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_node_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/clustal_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/seq/clustal_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/state.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/state.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./ics_editor.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./ics_editor.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/load.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/seq/load.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./point.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./point.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gfx_node_visitor.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_node_visitor.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./not_connected_error.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./not_connected_error.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/transition.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/transition.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./polygon_mask.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./polygon_mask.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/seq/save.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/seq/save.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/python_shell/transition_guard.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/python_shell/transition_guard.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gfx_object_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_object_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./property_id.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./property_id.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./progress.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./progress.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gfx_object.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_object.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/button_bar.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/button_bar.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./binary_data_sink.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./binary_data_sink.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./query.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./query.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./size.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./size.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./io_manager.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./io_manager.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gfx_object_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_object_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/drop_box.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/drop_box.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./spherical_mask.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./spherical_mask.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./query_error.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./query_error.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./binary_data_source.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./binary_data_source.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gfx_prim.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_prim.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./util.cc /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./util.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/panel_bar.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/panel_bar.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./query_state.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./query_state.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./residue_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./residue_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/panel_manager.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/panel_manager.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./symmetry_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./symmetry_node.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./util.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./util.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./value_util.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./value_util.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./residue_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./residue_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/bottom_bar.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/bottom_bar.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gfx_test_object.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gfx_test_object.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./container_serialization.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./container_serialization.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./vecmat.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./vecmat.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./glwin_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./glwin_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/button_box.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/button_box.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./input.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./input.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./swap_util.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./swap_util.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./residue_prop.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./residue_prop.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/img/base/src/./mask_info_convert.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/img/./mask_info_convert.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/event_button.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/event_button.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./prim_list.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./prim_list.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./io_utils.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./io_utils.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/panel_widget_container.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/panel_widget_container.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./residue_view.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./residue_view.hh
[  7%] Built target ost_img_headers
make  -f modules/img/base/src/CMakeFiles/ost_img.dir/build.make modules/img/base/src/CMakeFiles/ost_img.dir/depend
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./io_exception.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./io_exception.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/img/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/src/CMakeFiles/ost_img.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./sec_structure.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./sec_structure.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/panel_bar_widget_holder.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/panel_bar_widget_holder.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./scene.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./scene.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./convert.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./convert.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./spatial_organizer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./spatial_organizer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./selection.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./selection.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/side_bar.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/side_bar.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./converting_streams.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./converting_streams.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./surface.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./surface.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/splitter_panel_bar.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/splitter_panel_bar.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./surface.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./surface.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./texture.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./texture.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/panels/tabbed_panel_bar.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/panels/tabbed_panel_bar.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./formatted_line.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./formatted_line.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./surface_builder.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./surface_builder.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./vertex_array.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./vertex_array.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/context_menu.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/context_menu.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./vertex_array_helper.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./vertex_array_helper.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/img/base/src/CMakeFiles/ost_img.dir/build.make modules/img/base/src/CMakeFiles/ost_img.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/current_selection_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/current_selection_node.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./builder.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./builder.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/chemdict_parser.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./chemdict_parser.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./scene_observer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./scene_observer.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/img/base/src/CMakeFiles/ost_img.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/star_parser.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./star_parser.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/custom_part_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/custom_part_node.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./surface_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./surface_handle.hh
[ 10%] Built target ost_img
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gl_include.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gl_include.hh
make  -f modules/img/alg/src/CMakeFiles/ost_img_alg.dir/build.make modules/img/alg/src/CMakeFiles/ost_img_alg.dir/depend
make  -f modules/img/base/pymod/CMakeFiles/_ost_img.dir/build.make modules/img/base/pymod/CMakeFiles/_ost_img.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/img/alg/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/src/CMakeFiles/ost_img_alg.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/star_writer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./star_writer.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/img/base/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/pymod/CMakeFiles/_ost_img.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./surface_prop.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./surface_prop.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./glext_include.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./glext_include.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/mmcif_reader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./mmcif_reader.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/entity_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/entity_node.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./render_mode.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./render_mode.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./torsion_handle.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./torsion_handle.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/mmcif_info.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./mmcif_info.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/entity_part_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/entity_part_node.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./material.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./material.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/mmcif_writer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./mmcif_writer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./transfer_connectivity.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./transfer_connectivity.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/gfx_scene_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/gfx_scene_node.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gradient.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gradient.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/io_profile.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./io_profile.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gradient_manager.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gradient_manager.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/img/alg/src/CMakeFiles/ost_img_alg.dir/build.make modules/img/alg/src/CMakeFiles/ost_img_alg.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/label_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/label_node.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./query_view_wrapper.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./query_view_wrapper.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/dcd_io.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./dcd_io.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/root_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/root_node.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/img/alg/src/CMakeFiles/ost_img_alg.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./view_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./view_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/render_mode_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/render_mode_node.hh
[ 14%] Built target ost_img_alg
make  -f modules/img/base/tests/CMakeFiles/ost_img_tests.dir/build.make modules/img/base/tests/CMakeFiles/ost_img_tests.dir/depend
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/entity_io_crd_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_crd_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./view_type_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./view_type_fw.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/img/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/tests/CMakeFiles/ost_img_tests.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/img/base/pymod/CMakeFiles/_ost_img.dir/build.make modules/img/base/pymod/CMakeFiles/_ost_img.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./primitives.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./primitives.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/render_modes_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/render_modes_node.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./view_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./view_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/entity_io_pqr_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_pqr_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./povray_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./povray_fw.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/img/base/pymod/CMakeFiles/_ost_img.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/entity_io_mae_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_mae_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/scene_node.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/scene_node.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/img/base/tests/CMakeFiles/ost_img_tests.dir/build.make modules/img/base/tests/CMakeFiles/ost_img_tests.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./xcs_editor.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./xcs_editor.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/entity_io_mmcif_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_mmcif_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./povray.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./povray.hh
[ 15%] Built target _ost_img
make  -f modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/build.make modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/depend
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./bounding_box.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./bounding_box.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/scene_win.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/scene_win.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/img/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/entity_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_handler.hh
[ 15%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_data.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_data.cc.o -MF CMakeFiles/ost_img_tests.dir/test_data.cc.o.d -o CMakeFiles/ost_img_tests.dir/test_data.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/tests/test_data.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/scene_win/scene_win_model.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/scene_win/scene_win_model.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./transform.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./transform.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./exporter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./exporter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/pdb_reader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./pdb_reader.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/build.make modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./exporter_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./exporter_fw.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/messages/message_widget.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/messages/message_widget.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/./module_config.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/entity_io_pdb_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_pdb_handler.hh
[ 15%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_clear.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_clear.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_clear.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_clear.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/tests/test_clear.cc
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./gost_exporter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./gost_exporter.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/messages/message_box_widget.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/messages/message_box_widget.hh
[ 15%] Built target ost_mol_headers
make  -f modules/mol/base/src/CMakeFiles/ost_mol.dir/build.make modules/mol/base/src/CMakeFiles/ost_mol.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/src/CMakeFiles/ost_mol.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/pdb_writer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./pdb_writer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./color_ops/map_handle_color_op.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./map_handle_color_op.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/messages/log_reader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/messages/log_reader.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/argand.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/argand.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/entity_io_sdf_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./entity_io_sdf_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./map_iso.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./map_iso.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/data_viewer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/data_viewer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./map_slab.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./map_slab.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/data_viewer_panel.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/data_viewer_panel.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/sdf_reader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./sdf_reader.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gfx/src/./map_iso_prop.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gfx/./map_iso_prop.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/data_viewer_panel_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/data_viewer_panel_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/sdf_writer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./sdf_writer.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/draw_overlay.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/draw_overlay.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/save_entity.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./save_entity.hh
[ 15%] Built target ost_gfx_headers
make  -f modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/build.make modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/img/alg/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/drawing_functions.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/drawing_functions.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/load_entity.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./load_entity.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/fft_panel.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/fft_panel.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/surface_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./surface_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/info_panel.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/info_panel.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/load_surface.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./load_surface.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/img2qt.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/img2qt.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/surface_io_msms_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./surface_io_msms_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/mask_overlay.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/mask_overlay.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/pdb_str.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./pdb_str.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/build.make modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/null_overlay.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/null_overlay.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/sdf_str.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./sdf_str.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/overlay.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/img/alg/pymod/CMakeFiles/_ost_img_alg.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/mmcif_str.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./mmcif_str.hh
[ 17%] Built target _ost_img_alg
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/overlay_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/overlay_base_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_base_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/stereochemical_params_reader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./stereochemical_params_reader.hh
[ 17%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_extent.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_extent.cc.o -MF CMakeFiles/ost_img_tests.dir/test_extent.cc.o.d -o CMakeFiles/ost_img_tests.dir/test_extent.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/tests/test_extent.cc
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/overlay_manager.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_manager.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./mol/omf.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./omf.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/overlay_manager_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_manager_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./seq/sequence_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./sequence_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/overlay_manager_gui.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_manager_gui.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/overlay_manager_observer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/overlay_manager_observer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./seq/fasta_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./fasta_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./seq/pir_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./pir_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./seq/promod_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./promod_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/pointlist_overlay.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/pointlist_overlay.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./seq/profile_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./profile_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/pointlist_overlay_base.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/pointlist_overlay_base.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./seq/hhm_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./hhm_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./seq/pssm_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./pssm_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/strategies.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/strategies.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./seq/clustal_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./clustal_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./seq/load.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./load.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/strategies_fw.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/strategies_fw.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./seq/save.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./save.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/base/src/CMakeFiles/ost_mol.dir/build.make modules/mol/base/src/CMakeFiles/ost_mol.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/data_viewer/viewer_normalizer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/data_viewer/viewer_normalizer.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/load_map.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./load_map.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./file_browser.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./file_browser.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/mol/base/src/CMakeFiles/ost_mol.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_df3_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_df3_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./file_type_dialog.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./file_type_dialog.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/image_format.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./image_format.hh
[ 22%] Built target ost_mol
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./file_viewer.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./file_viewer.hh
make  -f modules/seq/base/src/CMakeFiles/ost_seq.dir/build.make modules/seq/base/src/CMakeFiles/ost_seq.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/src/CMakeFiles/ost_seq.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_dx_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_dx_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_spi_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_spi_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./gl_canvas.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./gl_canvas.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_situs_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_situs_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./gl_win.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./gl_win.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./scene_menu.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./scene_menu.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_mrc_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_mrc_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./gosty_app.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./gosty_app.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_dat_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_dat_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./admin.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./admin.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/seq/base/src/CMakeFiles/ost_seq.dir/build.make modules/seq/base/src/CMakeFiles/ost_seq.dir/build
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_ipl_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_ipl_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./module_config.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./module_config.hh
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/seq/base/src/CMakeFiles/ost_seq.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./main.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./main.hh
[ 23%] Built target ost_seq
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_jpk_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_jpk_handler.hh
make  -f modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/build.make modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/base/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./main_area.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./main_area.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_nanoscope_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_nanoscope_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./perspective.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./perspective.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_png_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_png_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./scene_selection.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./scene_selection.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_dm3_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_dm3_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./main_window.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./main_window.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/map_io_tiff_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./map_io_tiff_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./dock_widget.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./dock_widget.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/tiff_util.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./tiff_util.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./dock_widget.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./dock_widget.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/io/src/./img/jpk_util.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/io/./jpk_util.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./thin_splitter.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./thin_splitter.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./widget.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./widget.hh
[ 23%] Built target ost_io_headers
make  -f modules/db/src/CMakeFiles/ost_db.dir/build.make modules/db/src/CMakeFiles/ost_db.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/db/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/src/CMakeFiles/ost_db.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./widget_geom_handler.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./widget_geom_handler.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./widget_pool.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./widget_pool.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/db/src/CMakeFiles/ost_db.dir/build.make modules/db/src/CMakeFiles/ost_db.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/db/src/CMakeFiles/ost_db.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./widget_registry.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./widget_registry.hh
[ 24%] Built target ost_db
make  -f modules/base/tests/CMakeFiles/ost_base_tests.dir/build.make modules/base/tests/CMakeFiles/ost_base_tests.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/tests/CMakeFiles/ost_base_tests.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./widget_state_saver.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./widget_state_saver.hh
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/modules/gui/src/./file_loader.hh /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/gui/./file_loader.hh
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/base/tests/CMakeFiles/ost_base_tests.dir/build.make modules/base/tests/CMakeFiles/ost_base_tests.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 24%] Building CXX object modules/base/tests/CMakeFiles/ost_base_tests.dir/test_generic_property.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/tests/CMakeFiles/ost_base_tests.dir/test_generic_property.cc.o -MF CMakeFiles/ost_base_tests.dir/test_generic_property.cc.o.d -o CMakeFiles/ost_base_tests.dir/test_generic_property.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/base/tests/test_generic_property.cc
[ 24%] Built target ost_gui_headers
make  -f modules/bindings/src/CMakeFiles/ost_bindings.dir/build.make modules/bindings/src/CMakeFiles/ost_bindings.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/bindings/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/src/CMakeFiles/ost_bindings.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/build.make modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/build
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/bindings/src/CMakeFiles/ost_bindings.dir/build.make modules/bindings/src/CMakeFiles/ost_bindings.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/bindings/src/CMakeFiles/ost_bindings.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/mol/base/pymod/CMakeFiles/_ost_mol.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 24%] Built target ost_bindings
make  -f modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/build.make modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/DependInfo.cmake "--color="
[ 26%] Built target _ost_mol
make  -f modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/build.make modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/build.make modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
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make  -f modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/build.make modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 26%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_atom_groups.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_atom_groups.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_atom_groups.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_atom_groups.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_atom_groups.cc
[ 26%] Building CXX object modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/test_sequence.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/test_sequence.cc.o -MF CMakeFiles/ost_seq_tests.dir/test_sequence.cc.o.d -o CMakeFiles/ost_seq_tests.dir/test_sequence.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/base/tests/test_sequence.cc
[ 26%] Building CXX object modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/test_aligned_column.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/test_aligned_column.cc.o -MF CMakeFiles/ost_seq_tests.dir/test_aligned_column.cc.o.d -o CMakeFiles/ost_seq_tests.dir/test_aligned_column.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/base/tests/test_aligned_column.cc
[ 26%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_image.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_image.cc.o -MF CMakeFiles/ost_img_tests.dir/test_image.cc.o.d -o CMakeFiles/ost_img_tests.dir/test_image.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/tests/test_image.cc
[ 26%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_image_state.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_image_state.cc.o -MF CMakeFiles/ost_img_tests.dir/test_image_state.cc.o.d -o CMakeFiles/ost_img_tests.dir/test_image_state.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/tests/test_image_state.cc
[ 26%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_conj.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_conj.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_conj.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_conj.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/tests/test_conj.cc
[ 26%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_convolute.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_convolute.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_convolute.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_convolute.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/tests/test_convolute.cc
[ 26%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_chain.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_chain.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_chain.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_chain.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_chain.cc
[ 26%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_conn.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_conn.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_conn.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_conn.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_conn.cc
[ 26%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_discrete_shrink.cc.o
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[ 26%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_fft.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_fft.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_fft.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_fft.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/tests/test_fft.cc
[ 26%] Building CXX object modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/test_aligned_region.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/test_aligned_region.cc.o -MF CMakeFiles/ost_seq_tests.dir/test_aligned_region.cc.o.d -o CMakeFiles/ost_seq_tests.dir/test_aligned_region.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/base/tests/test_aligned_region.cc
[ 26%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_image_state_visitor.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_image_state_visitor.cc.o -MF CMakeFiles/ost_img_tests.dir/test_image_state_visitor.cc.o.d -o CMakeFiles/ost_img_tests.dir/test_image_state_visitor.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/tests/test_image_state_visitor.cc
[ 26%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_fill.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_fill.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_fill.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_fill.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/tests/test_fill.cc
[ 27%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_coord_group.cc.o
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[ 27%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_index.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_index.cc.o -MF CMakeFiles/ost_img_tests.dir/test_index.cc.o.d -o CMakeFiles/ost_img_tests.dir/test_index.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/tests/test_index.cc
[ 27%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_point.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_point.cc.o -MF CMakeFiles/ost_img_tests.dir/test_point.cc.o.d -o CMakeFiles/ost_img_tests.dir/test_point.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/tests/test_point.cc
[ 27%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_sampling.cc.o
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[ 28%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_filter.cc.o
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[ 28%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_histogram.cc.o
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[ 28%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_domains.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_domains.cc.o -MF CMakeFiles/ost_img_tests.dir/test_domains.cc.o.d -o CMakeFiles/ost_img_tests.dir/test_domains.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/tests/test_domains.cc
[ 28%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_mirror.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_mirror.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_mirror.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_mirror.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/tests/test_mirror.cc
[ 29%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_size.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_size.cc.o -MF CMakeFiles/ost_img_tests.dir/test_size.cc.o.d -o CMakeFiles/ost_img_tests.dir/test_size.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/tests/test_size.cc
[ 29%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_negate.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_negate.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_negate.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_negate.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/tests/test_negate.cc
[ 29%] Building CXX object modules/base/tests/CMakeFiles/ost_base_tests.dir/test_string_ref.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/tests/CMakeFiles/ost_base_tests.dir/test_string_ref.cc.o -MF CMakeFiles/ost_base_tests.dir/test_string_ref.cc.o.d -o CMakeFiles/ost_base_tests.dir/test_string_ref.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/base/tests/test_string_ref.cc
[ 29%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_value_holder.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/test_value_holder.cc.o -MF CMakeFiles/ost_img_tests.dir/test_value_holder.cc.o.d -o CMakeFiles/ost_img_tests.dir/test_value_holder.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/tests/test_value_holder.cc
[ 29%] Building CXX object modules/img/base/tests/CMakeFiles/ost_img_tests.dir/tests.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/base/tests/CMakeFiles/ost_img_tests.dir/tests.cc.o -MF CMakeFiles/ost_img_tests.dir/tests.cc.o.d -o CMakeFiles/ost_img_tests.dir/tests.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/base/tests/tests.cc
[ 29%] Linking CXX executable ../../../tests/ost_geom_tests
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_geom_tests.dir/link.txt --verbose=1
[ 29%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_builder.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_builder.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_builder.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_builder.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_builder.cc
[ 29%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_delete.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_delete.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_delete.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_delete.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_delete.cc
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file,CMakeFiles/ost_geom_tests.dir/link.d CMakeFiles/ost_geom_tests.dir/test_composite3.cc.o CMakeFiles/ost_geom_tests.dir/test_composite2.cc.o CMakeFiles/ost_geom_tests.dir/test_mat2.cc.o CMakeFiles/ost_geom_tests.dir/test_mat3.cc.o CMakeFiles/ost_geom_tests.dir/test_mat4.cc.o CMakeFiles/ost_geom_tests.dir/test_op2.cc.o CMakeFiles/ost_geom_tests.dir/test_op3.cc.o CMakeFiles/ost_geom_tests.dir/test_op4.cc.o CMakeFiles/ost_geom_tests.dir/test_quat.cc.o CMakeFiles/ost_geom_tests.dir/test_vec2.cc.o CMakeFiles/ost_geom_tests.dir/test_vec3.cc.o CMakeFiles/ost_geom_tests.dir/test_vec4.cc.o CMakeFiles/ost_geom_tests.dir/test_transform.cc.o CMakeFiles/ost_geom_tests.dir/tests.cc.o -o ../../../tests/ost_geom_tests   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0
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[ 29%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_power_spectrum.cc.o
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[ 29%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_entity.cc.o
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[ 29%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_ics.cc.o
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make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/seq/alg/src/CMakeFiles/ost_seq_alg.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 31%] Built target ost_seq_alg
make  -f modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/build.make modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/base/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/DependInfo.cmake "--color="
make  -f modules/conop/src/CMakeFiles/ost_conop.dir/build.make modules/conop/src/CMakeFiles/ost_conop.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/conop/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/src/CMakeFiles/ost_conop.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/conop/src/CMakeFiles/ost_conop.dir/build.make modules/conop/src/CMakeFiles/ost_conop.dir/build
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/build.make modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/conop/src/CMakeFiles/ost_conop.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/seq/base/pymod/CMakeFiles/_ost_seq.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 34%] Built target ost_conop
make  -f modules/geom/tests/CMakeFiles/ost_geom_tests_run.dir/build.make modules/geom/tests/CMakeFiles/ost_geom_tests_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/geom/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/tests/CMakeFiles/ost_geom_tests_run.dir/DependInfo.cmake "--color="
[ 34%] Built target _ost_seq
make  -f modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/build.make modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/geom/tests/CMakeFiles/ost_geom_tests_run.dir/build.make modules/geom/tests/CMakeFiles/ost_geom_tests_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 34%] running checks for module geom
cd /build/reproducible-path/openstructure-2.9.0/modules/geom/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/tests/ost_geom_tests
Running 25 test cases...

*** No errors detected
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 34%] Built target ost_geom_tests_run
make  -f modules/gfx/src/CMakeFiles/ost_gfx.dir/build.make modules/gfx/src/CMakeFiles/ost_gfx.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/gfx/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/src/CMakeFiles/ost_gfx.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/build.make modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/seq/alg/pymod/CMakeFiles/_ost_seq_alg.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 34%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_query.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_query.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_query.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_query.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_query.cc
[ 35%] Built target _ost_seq_alg
make  -f modules/db/pymod/CMakeFiles/_ost_db.dir/build.make modules/db/pymod/CMakeFiles/_ost_db.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/db/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/pymod/CMakeFiles/_ost_db.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/db/pymod/CMakeFiles/_ost_db.dir/build.make modules/db/pymod/CMakeFiles/_ost_db.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/db/pymod/CMakeFiles/_ost_db.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 35%] Built target _ost_db
make  -f modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/build.make modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/gfx/src/CMakeFiles/ost_gfx.dir/build.make modules/gfx/src/CMakeFiles/ost_gfx.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/gfx/src/CMakeFiles/ost_gfx.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 41%] Built target ost_gfx
make  -f modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/build.make modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/bindings/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/build.make modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/bindings/pymod/CMakeFiles/_ost_bindings.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 41%] Built target _ost_bindings
make  -f modules/conop/tests/CMakeFiles/ost_conop_tests.dir/build.make modules/conop/tests/CMakeFiles/ost_conop_tests.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/conop/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/tests/CMakeFiles/ost_conop_tests.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/conop/tests/CMakeFiles/ost_conop_tests.dir/build.make modules/conop/tests/CMakeFiles/ost_conop_tests.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/build.make modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/build
[ 41%] Building CXX object modules/conop/tests/CMakeFiles/ost_conop_tests.dir/test_amino_acids.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/conop/tests/CMakeFiles/ost_conop_tests.dir/test_amino_acids.cc.o -MF CMakeFiles/ost_conop_tests.dir/test_amino_acids.cc.o.d -o CMakeFiles/ost_conop_tests.dir/test_amino_acids.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/tests/test_amino_acids.cc
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/mol/alg/src/CMakeFiles/ost_mol_alg.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 43%] Built target ost_mol_alg
make  -f modules/conop/pymod/CMakeFiles/_ost_conop.dir/build.make modules/conop/pymod/CMakeFiles/_ost_conop.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/conop/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/pymod/CMakeFiles/_ost_conop.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/conop/pymod/CMakeFiles/_ost_conop.dir/build.make modules/conop/pymod/CMakeFiles/_ost_conop.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/conop/pymod/CMakeFiles/_ost_conop.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 44%] Built target _ost_conop
make  -f modules/io/src/CMakeFiles/ost_io.dir/build.make modules/io/src/CMakeFiles/ost_io.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/io/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/src/CMakeFiles/ost_io.dir/DependInfo.cmake "--color="
[ 44%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_shift.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_shift.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_shift.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_shift.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/tests/test_shift.cc
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/io/src/CMakeFiles/ost_io.dir/build.make modules/io/src/CMakeFiles/ost_io.dir/build
[ 44%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_stat.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_stat.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/test_stat.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/test_stat.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/tests/test_stat.cc
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/pymod/CMakeFiles/_ost_mol_alg.dir/DependInfo.cmake "--color="
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[ 51%] Building CXX object modules/gfx/tests/CMakeFiles/ost_gfx_tests.dir/tests.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/gfx/tests/CMakeFiles/ost_gfx_tests.dir/tests.cc.o -MF CMakeFiles/ost_gfx_tests.dir/tests.cc.o.d -o CMakeFiles/ost_gfx_tests.dir/tests.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/tests/tests.cc
[ 51%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_transform.cc.o
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[ 51%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/test_normalizer.cc.o
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[ 51%] Building CXX object modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/tests.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/img/alg/tests/CMakeFiles/ost_img_alg_tests.dir/tests.cc.o -MF CMakeFiles/ost_img_alg_tests.dir/tests.cc.o.d -o CMakeFiles/ost_img_alg_tests.dir/tests.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/img/alg/tests/tests.cc
[ 51%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_surface.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_surface.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_surface.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_surface.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_surface.cc
[ 51%] Building CXX object modules/gfx/tests/CMakeFiles/ost_gfx_tests.dir/test_gfx_node.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/gfx/tests/CMakeFiles/ost_gfx_tests.dir/test_gfx_node.cc.o -MF CMakeFiles/ost_gfx_tests.dir/test_gfx_node.cc.o.d -o CMakeFiles/ost_gfx_tests.dir/test_gfx_node.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/tests/test_gfx_node.cc
[ 52%] Building CXX object modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/test_alignment.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/test_alignment.cc.o -MF CMakeFiles/ost_seq_tests.dir/test_alignment.cc.o.d -o CMakeFiles/ost_seq_tests.dir/test_alignment.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/base/tests/test_alignment.cc
[ 52%] Building CXX object modules/gfx/tests/CMakeFiles/ost_gfx_tests.dir/test_color.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/gfx/tests/CMakeFiles/ost_gfx_tests.dir/test_color.cc.o -MF CMakeFiles/ost_gfx_tests.dir/test_color.cc.o.d -o CMakeFiles/ost_gfx_tests.dir/test_color.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/tests/test_color.cc
[ 52%] Building CXX object modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/test_profile.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/test_profile.cc.o -MF CMakeFiles/ost_seq_tests.dir/test_profile.cc.o.d -o CMakeFiles/ost_seq_tests.dir/test_profile.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/base/tests/test_profile.cc
[ 52%] Linking CXX executable ../../../../tests/ost_img_tests
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_img_tests.dir/link.txt --verbose=1
[ 52%] Building CXX object modules/gfx/tests/CMakeFiles/ost_gfx_tests.dir/test_map_octree.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/gfx/tests/CMakeFiles/ost_gfx_tests.dir/test_map_octree.cc.o -MF CMakeFiles/ost_gfx_tests.dir/test_map_octree.cc.o.d -o CMakeFiles/ost_gfx_tests.dir/test_map_octree.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/gfx/tests/test_map_octree.cc
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file,CMakeFiles/ost_img_tests.dir/link.d CMakeFiles/ost_img_tests.dir/test_data.cc.o CMakeFiles/ost_img_tests.dir/test_extent.cc.o CMakeFiles/ost_img_tests.dir/test_image.cc.o CMakeFiles/ost_img_tests.dir/test_image_state.cc.o CMakeFiles/ost_img_tests.dir/test_image_state_visitor.cc.o CMakeFiles/ost_img_tests.dir/test_index.cc.o CMakeFiles/ost_img_tests.dir/test_point.cc.o CMakeFiles/ost_img_tests.dir/test_sampling.cc.o CMakeFiles/ost_img_tests.dir/test_domains.cc.o CMakeFiles/ost_img_tests.dir/test_size.cc.o CMakeFiles/ost_img_tests.dir/test_value_holder.cc.o CMakeFiles/ost_img_tests.dir/tests.cc.o -o ../../../../tests/ost_img_tests   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../../stage/lib/libost_img_alg.so.2.9.0 ../../../../stage/lib/libost_img.so.2.9.0 ../../../../stage/lib/libost_info.so.2.9.0 ../../../../stage/lib/libost_base.so.2.9.0 ../../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/io/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests/CMakeFiles/ost_io_tests.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_residue.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_residue.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_residue.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_residue.cc
[ 52%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_clustal.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_clustal.cc.o -MF CMakeFiles/ost_io_tests.dir/test_clustal.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_clustal.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/tests/test_clustal.cc
[ 52%] Building CXX object modules/conop/tests/CMakeFiles/ost_conop_tests.dir/test_heuristic_conop.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/conop/tests/CMakeFiles/ost_conop_tests.dir/test_heuristic_conop.cc.o -MF CMakeFiles/ost_conop_tests.dir/test_heuristic_conop.cc.o.d -o CMakeFiles/ost_conop_tests.dir/test_heuristic_conop.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/tests/test_heuristic_conop.cc
[ 52%] Building CXX object modules/base/tests/CMakeFiles/ost_base_tests.dir/test_pod_vector.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/base/tests/CMakeFiles/ost_base_tests.dir/test_pod_vector.cc.o -MF CMakeFiles/ost_base_tests.dir/test_pod_vector.cc.o.d -o CMakeFiles/ost_base_tests.dir/test_pod_vector.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/base/tests/test_pod_vector.cc
[ 52%] Building CXX object modules/conop/tests/CMakeFiles/ost_conop_tests.dir/tests.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/conop/tests/CMakeFiles/ost_conop_tests.dir/tests.cc.o -MF CMakeFiles/ost_conop_tests.dir/tests.cc.o.d -o CMakeFiles/ost_conop_tests.dir/tests.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/tests/tests.cc
[ 52%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_view.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_view.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_view.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_view.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_view.cc
[ 52%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_transfer_connectivity.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_transfer_connectivity.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_transfer_connectivity.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_transfer_connectivity.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_transfer_connectivity.cc
[ 52%] Building CXX object modules/conop/tests/CMakeFiles/ost_conop_tests.dir/test_rule_based_conop.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/conop/tests/CMakeFiles/ost_conop_tests.dir/test_rule_based_conop.cc.o -MF CMakeFiles/ost_conop_tests.dir/test_rule_based_conop.cc.o.d -o CMakeFiles/ost_conop_tests.dir/test_rule_based_conop.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/tests/test_rule_based_conop.cc
In file included from /usr/include/c++/14/string:54,
                 from /usr/include/boost/test/utils/basic_cstring/bcs_char_traits.hpp:25,
                 from /usr/include/boost/test/utils/basic_cstring/basic_cstring.hpp:21,
                 from /usr/include/boost/test/detail/global_typedef.hpp:15,
                 from /usr/include/boost/test/tools/detail/print_helper.hpp:20,
                 from /usr/include/boost/test/utils/lazy_ostream.hpp:16,
                 from /usr/include/boost/test/tools/context.hpp:19,
                 from /usr/include/boost/test/test_tools.hpp:42,
                 from /usr/include/boost/test/unit_test.hpp:18,
                 from /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_chain.cc:23:
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:904:15,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void mol_base::throw_invalid_chain_handle::test_method()' at /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_chain.cc:114:18:
/usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized]
 1084 |       { return _M_string_length; }
      |                ^~~~~~~~~~~~~~~~
In file included from /usr/include/boost/variant.hpp:17,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/query.hh:30,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_handle.hh:26,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mol.hh:22,
                 from /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_chain.cc:25:
/usr/include/boost/variant/variant.hpp: In member function 'void mol_base::throw_invalid_chain_handle::test_method()':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In file included from /usr/include/c++/14/string:42:
In static member function 'static constexpr void std::char_traits<char>::assign(char_type&, const char_type&)',
    inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:433:23,
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:882:18,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void mol_base::throw_invalid_chain_handle::test_method()' at /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_chain.cc:114:18:
/usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits<char>::char_type*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized]
  350 |         __c1 = __c2;
      |                ^~~~
/usr/include/boost/variant/variant.hpp: In member function 'void mol_base::throw_invalid_chain_handle::test_method()':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void mol_base::throw_invalid_chain_handle::test_method()' at /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_chain.cc:114:18:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In member function 'void mol_base::throw_invalid_chain_handle::test_method()':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::ResidueBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void mol_base::throw_invalid_chain_handle::test_method()' at /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_chain.cc:114:18:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In member function 'void mol_base::throw_invalid_chain_handle::test_method()':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
[ 52%] Building CXX object modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/tests.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/seq/base/tests/CMakeFiles/ost_seq_tests.dir/tests.cc.o -MF CMakeFiles/ost_seq_tests.dir/tests.cc.o.d -o CMakeFiles/ost_seq_tests.dir/tests.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/base/tests/tests.cc
[ 52%] Building CXX object modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_view_op.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/base/tests/CMakeFiles/ost_mol_tests.dir/test_view_op.cc.o -MF CMakeFiles/ost_mol_tests.dir/test_view_op.cc.o.d -o CMakeFiles/ost_mol_tests.dir/test_view_op.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_view_op.cc
In file included from /usr/include/c++/14/string:54,
                 from /usr/include/boost/test/utils/basic_cstring/bcs_char_traits.hpp:25,
                 from /usr/include/boost/test/utils/basic_cstring/basic_cstring.hpp:21,
                 from /usr/include/boost/test/detail/global_typedef.hpp:15,
                 from /usr/include/boost/test/tools/detail/print_helper.hpp:20,
                 from /usr/include/boost/test/utils/lazy_ostream.hpp:16,
                 from /usr/include/boost/test/tools/context.hpp:19,
                 from /usr/include/boost/test/test_tools.hpp:42,
                 from /usr/include/boost/test/unit_test.hpp:18,
                 from /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_entity.cc:24:
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:904:15,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'void mol_base::minmax::test_method()' at /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_entity.cc:436:20:
/usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized]
 1084 |       { return _M_string_length; }
      |                ^~~~~~~~~~~~~~~~
In file included from /usr/include/boost/variant.hpp:17,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/query.hh:30,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/entity_handle.hh:26,
                 from /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/mol/mol.hh:22,
                 from /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_entity.cc:27:
/usr/include/boost/variant/variant.hpp: In member function 'void mol_base::minmax::test_method()':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In file included from /usr/include/c++/14/string:42:
In static member function 'static constexpr void std::char_traits<char>::assign(char_type&, const char_type&)',
    inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:433:23,
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:882:18,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'void mol_base::minmax::test_method()' at /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_entity.cc:436:20:
/usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits<char>::char_type*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized]
  350 |         __c1 = __c2;
      |                ^~~~
/usr/include/boost/variant/variant.hpp: In member function 'void mol_base::minmax::test_method()':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'void mol_base::minmax::test_method()' at /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_entity.cc:436:20:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In member function 'void mol_base::minmax::test_method()':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = float; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetFloatProp(const String&, Real) [with H = ost::mol::AtomBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:358:38,
    inlined from 'void mol_base::minmax::test_method()' at /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_entity.cc:436:20:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In member function 'void mol_base::minmax::test_method()':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_pdb.cc.o -MF CMakeFiles/ost_io_tests.dir/test_io_pdb.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_io_pdb.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/tests/test_io_pdb.cc
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make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
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make  -f modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/build.make modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/src/CMakeFiles/ost_mol_mm.dir/DependInfo.cmake "--color="
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[ 54%] Built target ost_mol_mm
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/DependInfo.cmake "--color="
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make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 54%] Building CXX object modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/test_distance_analysis.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/test_distance_analysis.cc.o -MF CMakeFiles/ost_seq_alg_tests.dir/test_distance_analysis.cc.o.d -o CMakeFiles/ost_seq_alg_tests.dir/test_distance_analysis.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests/test_distance_analysis.cc
[ 54%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_crd.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_crd.cc.o -MF CMakeFiles/ost_io_tests.dir/test_io_crd.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_io_crd.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/tests/test_io_crd.cc
[ 54%] Building CXX object modules/conop/tests/CMakeFiles/ost_conop_tests.dir/helper.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/conop/tests/CMakeFiles/ost_conop_tests.dir/helper.cc.o -MF CMakeFiles/ost_conop_tests.dir/helper.cc.o.d -o CMakeFiles/ost_conop_tests.dir/helper.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/conop/tests/helper.cc
[ 54%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_dcd.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_dcd.cc.o -MF CMakeFiles/ost_io_tests.dir/test_io_dcd.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_io_dcd.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/tests/test_io_dcd.cc
[ 54%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_sdf.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_sdf.cc.o -MF CMakeFiles/ost_io_tests.dir/test_io_sdf.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_io_sdf.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/tests/test_io_sdf.cc
[ 54%] Linking CXX executable ../../../tests/ost_base_tests
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_base_tests.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file,CMakeFiles/ost_base_tests.dir/link.d CMakeFiles/ost_base_tests.dir/test_generic_property.cc.o CMakeFiles/ost_base_tests.dir/test_string_ref.cc.o CMakeFiles/ost_base_tests.dir/test_pod_vector.cc.o CMakeFiles/ost_base_tests.dir/tests.cc.o -o ../../../tests/ost_base_tests   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../stage/lib/libost_mol.so.2.9.0 ../../../stage/lib/libost_info.so.2.9.0 ../../../stage/lib/libost_base.so.2.9.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
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make  -f modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/build.make modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/depend
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/gfx/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/pymod/CMakeFiles/_ost_gfx.dir/DependInfo.cmake "--color="
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[ 56%] Built target _ost_gfx
make  -f modules/gui/src/CMakeFiles/ost_gui.dir/build.make modules/gui/src/CMakeFiles/ost_gui.dir/depend
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/gui/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/src/CMakeFiles/ost_gui.dir/DependInfo.cmake "--color="
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::length() const [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:904:15,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::ChainBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void mol_base::entity_creator::test_method()' at /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_entity.cc:140:19:
/usr/include/c++/14/bits/basic_string.h:1084:16: warning: '*(const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized]
 1084 |       { return _M_string_length; }
      |                ^~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In member function 'void mol_base::entity_creator::test_method()':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In static member function 'static constexpr void std::char_traits<char>::assign(char_type&, const char_type&)',
    inlined from 'static void std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_S_copy(_CharT*, const _CharT*, size_type) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:433:23,
    inlined from 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]' at /usr/include/c++/14/bits/basic_string.h:882:18,
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::ChainBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void mol_base::entity_creator::test_method()' at /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_entity.cc:140:19:
/usr/include/c++/14/bits/char_traits.h:350:16: warning: '((const std::char_traits<char>::char_type*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)))[16]' may be used uninitialized [-Wmaybe-uninitialized]
  350 |         __c1 = __c2;
      |                ^~~~
/usr/include/boost/variant/variant.hpp: In member function 'void mol_base::entity_creator::test_method()':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::ChainBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void mol_base::entity_creator::test_method()' at /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_entity.cc:140:19:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In member function 'void mol_base::entity_creator::test_method()':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>& std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::operator=(std::__cxx11::basic_string<_CharT, _Traits, _Alloc>&&) [with _CharT = char; _Traits = std::char_traits<char>; _Alloc = std::allocator<char>]',
    inlined from 'void boost::detail::variant::move_storage::internal_visit(T&, int) const [with T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/variant.hpp:597:21,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke_impl(int, Visitor&, VoidPtrCV, T*, mpl_::true_) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>]' at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl_invoke(int, Visitor&, VoidPtrCV, T*, NoBackupFlag, int) [with Visitor = move_storage; VoidPtrCV = void*; T = std::__cxx11::basic_string<char>; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41,
    inlined from 'typename Visitor::result_type boost::detail::variant::visitation_impl(int, int, Visitor&, VoidPtrCV, mpl_::false_, NoBackupFlag, Which*, step0*) [with Which = mpl_::int_<0>; step0 = visitation_impl_step<boost::mpl::l_iter<boost::mpl::l_item<mpl_::long_<5>, std::__cxx11::basic_string<char>, boost::mpl::l_item<mpl_::long_<4>, float, boost::mpl::l_item<mpl_::long_<3>, int, boost::mpl::l_item<mpl_::long_<2>, bool, boost::mpl::l_item<mpl_::long_<1>, geom::Vec3, boost::mpl::l_end> > > > > >, boost::mpl::l_iter<boost::mpl::l_end> >; Visitor = move_storage; VoidPtrCV = void*; NoBackupFlag = boost::variant<std::__cxx11::basic_string<char>, float, int, bool, geom::Vec3>::has_fallback_type_]' at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5,
    inlined from 'static typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor_impl(int, int, Visitor&, VoidPtrCV) [with Visitor = boost::detail::variant::move_storage; VoidPtrCV = void*; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2338:48,
    inlined from 'typename Visitor::result_type boost::variant<T0, TN>::internal_apply_visitor(Visitor&) [with Visitor = boost::detail::variant::move_storage; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2350:43,
    inlined from 'void boost::variant<T0, TN>::variant_assign(boost::variant<T0, TN>&&) [with T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2081:41,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2108:27,
    inlined from 'void boost::variant<T0, TN>::assign(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2095:10,
    inlined from 'typename boost::enable_if<boost::mpl::or_<boost::is_same<T, boost::variant<T0, TN> >, boost::detail::variant::is_variant_constructible_from<const T&, typename boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, boost::mpl::transform<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type, boost::mpl::protect<boost::detail::variant::quoted_enable_recursive<boost::variant<T0, TN> > > >, boost::mpl::identity<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_sequence_based_, typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, boost::detail::variant::make_variant_list<typename boost::mpl::eval_if<boost::variant<T0, TN>::is_recursive_, T0_, boost::mpl::identity<T> >::type, TN ...> >::type> >::type, boost::mpl::protect<boost::detail::make_reference_content<boost::detail::void_type> > >::type> >, boost::variant<T0, TN>&>::type boost::variant<T0, TN>::operator=(const T&) [with T = int; T0_ = std::__cxx11::basic_string<char>; TN = {float, int, bool, geom::Vec3}]' at /usr/include/boost/variant/variant.hpp:2160:15,
    inlined from 'void ost::GenericPropContainer<H>::SetIntProp(const String&, int) [with H = ost::mol::ChainBase]' at /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include/ost/generic_property.hh:365:38,
    inlined from 'void mol_base::entity_creator::test_method()' at /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_entity.cc:140:19:
/usr/include/c++/14/bits/basic_string.h:905:24: warning: '*(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*)((char*)&temp + offsetof(boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>,boost::variant<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, float, int, bool, geom::Vec3>::storage_.boost::aligned_storage<32, 8>::<unnamed>.boost::detail::aligned_storage::aligned_storage_imp<32, 8>::data_)).std::__cxx11::basic_string<char>::<anonymous>.std::__cxx11::basic_string<char>::<unnamed union>::_M_allocated_capacity' may be used uninitialized [-Wmaybe-uninitialized]
  905 |             _M_capacity(__str._M_allocated_capacity);
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/variant/variant.hpp: In member function 'void mol_base::entity_creator::test_method()':
/usr/include/boost/variant/variant.hpp:2107:21: note: 'temp' declared here
 2107 |             variant temp(rhs);
      |                     ^~~~
make  -f modules/io/pymod/CMakeFiles/_ost_io.dir/build.make modules/io/pymod/CMakeFiles/_ost_io.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/io/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/pymod/CMakeFiles/_ost_io.dir/DependInfo.cmake "--color="
[ 56%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_sdf_v3000.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_sdf_v3000.cc.o -MF CMakeFiles/ost_io_tests.dir/test_io_sdf_v3000.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_io_sdf_v3000.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/tests/test_io_sdf_v3000.cc
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/io/pymod/CMakeFiles/_ost_io.dir/build.make modules/io/pymod/CMakeFiles/_ost_io.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
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make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 57%] Built target _ost_io
make  -f modules/base/tests/CMakeFiles/ost_base_tests_run.dir/build.make modules/base/tests/CMakeFiles/ost_base_tests_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/tests/CMakeFiles/ost_base_tests_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/base/tests/CMakeFiles/ost_base_tests_run.dir/build.make modules/base/tests/CMakeFiles/ost_base_tests_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 57%] running checks for module base
cd /build/reproducible-path/openstructure-2.9.0/modules/base/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/tests/ost_base_tests
Running 5 test cases...

*** No errors detected
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 57%] Built target ost_base_tests_run
make  -f modules/img/base/tests/CMakeFiles/ost_img_tests_run.dir/build.make modules/img/base/tests/CMakeFiles/ost_img_tests_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/img/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/base/tests/CMakeFiles/ost_img_tests_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 57%] running checks for module img
cd /build/reproducible-path/openstructure-2.9.0/modules/img/base/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/tests/ost_img_tests
Running 44 test cases...

*** No errors detected
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/img/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/img/alg/tests/CMakeFiles/ost_img_alg_tests_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/img/alg/tests/CMakeFiles/ost_img_alg_tests_run.dir/build.make modules/img/alg/tests/CMakeFiles/ost_img_alg_tests_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
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cd /build/reproducible-path/openstructure-2.9.0/modules/img/alg/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/tests/ost_img_alg_tests
Running 25 test cases...

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make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 58%] Built target ost_img_alg_tests_run
make  -f modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/build.make modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/depend
[ 58%] Linking CXX executable ../../../tests/ost_gfx_tests
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_gfx_tests.dir/link.txt --verbose=1
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 58%] Building CXX object modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/test_interaction.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/test_interaction.cc.o -MF CMakeFiles/ost_mol_mm_tests.dir/test_interaction.cc.o.d -o CMakeFiles/ost_mol_mm_tests.dir/test_interaction.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/tests/test_interaction.cc
[ 58%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_sequence_profile.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_sequence_profile.cc.o -MF CMakeFiles/ost_io_tests.dir/test_io_sequence_profile.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_io_sequence_profile.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/tests/test_io_sequence_profile.cc
[ 58%] Linking CXX executable ../../../../tests/ost_seq_tests
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_seq_tests.dir/link.txt --verbose=1
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/gui/src/CMakeFiles/ost_gui.dir/build.make modules/gui/src/CMakeFiles/ost_gui.dir/build
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file,CMakeFiles/ost_gfx_tests.dir/link.d CMakeFiles/ost_gfx_tests.dir/tests.cc.o CMakeFiles/ost_gfx_tests.dir/test_gfx_node.cc.o CMakeFiles/ost_gfx_tests.dir/test_color.cc.o CMakeFiles/ost_gfx_tests.dir/test_map_octree.cc.o -o ../../../tests/ost_gfx_tests   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../stage/lib/libost_gfx.so.2.9.0 ../../../stage/lib/libost_io.so.2.9.0 /usr/lib/x86_64-linux-gnu/libOpenGL.so /usr/lib/x86_64-linux-gnu/libGLX.so /usr/lib/x86_64-linux-gnu/libGLU.so ../../../stage/lib/libost_mol_alg.so.2.9.0 ../../../stage/lib/libost_conop.so.2.9.0 ../../../stage/lib/libost_db.so.2.9.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_img_alg.so.2.9.0 ../../../stage/lib/libost_img.so.2.9.0 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../stage/lib/libost_seq_alg.so.2.9.0 ../../../stage/lib/libost_seq.so.2.9.0 ../../../stage/lib/libost_mol.so.2.9.0 ../../../stage/lib/libost_info.so.2.9.0 ../../../stage/lib/libost_base.so.2.9.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libparasail.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
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make  -f modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/build.make modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/pymod/CMakeFiles/_ost_mol_mm.dir/DependInfo.cmake "--color="
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make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 89%] Built target ost_gui
make  -f modules/gui/pymod/CMakeFiles/_ost_gui.dir/build.make modules/gui/pymod/CMakeFiles/_ost_gui.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/gui/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gui/pymod/CMakeFiles/_ost_gui.dir/DependInfo.cmake "--color="
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make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
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make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 90%] Built target _ost_mol_mm
make  -f modules/gfx/tests/CMakeFiles/ost_gfx_tests_run.dir/build.make modules/gfx/tests/CMakeFiles/ost_gfx_tests_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/gfx/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/tests/CMakeFiles/ost_gfx_tests_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/gfx/tests/CMakeFiles/ost_gfx_tests_run.dir/build.make modules/gfx/tests/CMakeFiles/ost_gfx_tests_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file,CMakeFiles/ost_seq_tests.dir/link.d CMakeFiles/ost_seq_tests.dir/test_sequence.cc.o CMakeFiles/ost_seq_tests.dir/test_aligned_column.cc.o CMakeFiles/ost_seq_tests.dir/test_aligned_region.cc.o CMakeFiles/ost_seq_tests.dir/test_alignment.cc.o CMakeFiles/ost_seq_tests.dir/test_profile.cc.o CMakeFiles/ost_seq_tests.dir/tests.cc.o -o ../../../../tests/ost_seq_tests   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../../stage/lib/libost_seq.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 ../../../../stage/lib/libost_mol.so.2.9.0 ../../../../stage/lib/libost_info.so.2.9.0 ../../../../stage/lib/libost_base.so.2.9.0 ../../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 90%] running checks for module gfx
cd /build/reproducible-path/openstructure-2.9.0/modules/gfx/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/tests/ost_gfx_tests
[ 90%] Built target ost_seq_tests
make  -f modules/seq/base/tests/CMakeFiles/ost_seq_tests_run.dir/build.make modules/seq/base/tests/CMakeFiles/ost_seq_tests_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/tests/CMakeFiles/ost_seq_tests_run.dir/DependInfo.cmake "--color="
Running 13 test cases...

*** No errors detected
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 90%] Built target ost_gfx_tests_run
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/seq/base/tests/CMakeFiles/ost_seq_tests_run.dir/build.make modules/seq/base/tests/CMakeFiles/ost_seq_tests_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 90%] Building CXX object modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/test_block.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/test_block.cc.o -MF CMakeFiles/ost_mol_mm_tests.dir/test_block.cc.o.d -o CMakeFiles/ost_mol_mm_tests.dir/test_block.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/tests/test_block.cc
[ 90%] running checks for module seq
cd /build/reproducible-path/openstructure-2.9.0/modules/seq/base/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/tests/ost_seq_tests
Running 32 test cases...

*** No errors detected
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 90%] Built target ost_seq_tests_run
[ 91%] Building CXX object modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/test_block_modifiers.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/test_block_modifiers.cc.o -MF CMakeFiles/ost_mol_mm_tests.dir/test_block_modifiers.cc.o.d -o CMakeFiles/ost_mol_mm_tests.dir/test_block_modifiers.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/tests/test_block_modifiers.cc
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/gui/pymod/CMakeFiles/_ost_gui.dir/build.make modules/gui/pymod/CMakeFiles/_ost_gui.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'modules/gui/pymod/CMakeFiles/_ost_gui.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 93%] Built target _ost_gui
make  -f scripts/CMakeFiles/ost_scripts.dir/build.make scripts/CMakeFiles/ost_scripts.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/scripts /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts/CMakeFiles/ost_scripts.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f scripts/CMakeFiles/ost_scripts.dir/build.make scripts/CMakeFiles/ost_scripts.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -E copy_if_different ost_config /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/openstructure/libexec/ost_config
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -E copy_if_different ost /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/bin/ost
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -E copy_if_different dng /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/bin/dng
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -E copy_if_different ost_startup.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/ost_startup.py
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/scripts && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openstructure-2.9.0/scripts/dng_startup.py /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages//ost/dng_startup.py
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 93%] Built target ost_scripts
make  -f modules/seq/alg/tests/CMakeFiles/test_aaindex.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_aaindex.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests/CMakeFiles/test_aaindex.py_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/seq/alg/tests/CMakeFiles/test_aaindex.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_aaindex.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 93%] running checks test_aaindex.py
cd /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests/test_aaindex.py"
Compound library not available. Some functionality may not work as expected.
.
----------------------------------------------------------------------
Ran 1 test in 0.665s

OK
[ 93%] Building CXX object modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests.dir/tests.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests.dir/tests.cc.o -MF CMakeFiles/ost_mol_alg_tests.dir/tests.cc.o.d -o CMakeFiles/ost_mol_alg_tests.dir/tests.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests/tests.cc
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 93%] Built target test_aaindex.py_run
make  -f modules/base/tests/CMakeFiles/test_stutil.py_run.dir/build.make modules/base/tests/CMakeFiles/test_stutil.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/tests/CMakeFiles/test_stutil.py_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/base/tests/CMakeFiles/test_stutil.py_run.dir/build.make modules/base/tests/CMakeFiles/test_stutil.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 93%] running checks test_stutil.py
cd /build/reproducible-path/openstructure-2.9.0/modules/base/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/base/tests/test_stutil.py"
Compound library not available. Some functionality may not work as expected.
......
----------------------------------------------------------------------
Ran 6 tests in 0.008s

OK
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 93%] Built target test_stutil.py_run
make  -f modules/base/tests/CMakeFiles/test_table.py_run.dir/build.make modules/base/tests/CMakeFiles/test_table.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/tests/CMakeFiles/test_table.py_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/base/tests/CMakeFiles/test_table.py_run.dir/build.make modules/base/tests/CMakeFiles/test_table.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 93%] running checks test_table.py
cd /build/reproducible-path/openstructure-2.9.0/modules/base/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/base/tests/test_table.py"
Compound library not available. Some functionality may not work as expected.
[ 94%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_pir.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_pir.cc.o -MF CMakeFiles/ost_io_tests.dir/test_pir.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_pir.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/tests/test_pir.cc
.......................[ 94%] Building CXX object modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/test_merge_pairwise_alignments.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/test_merge_pairwise_alignments.cc.o -MF CMakeFiles/ost_seq_alg_tests.dir/test_merge_pairwise_alignments.cc.o.d -o CMakeFiles/ost_seq_alg_tests.dir/test_merge_pairwise_alignments.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests/test_merge_pairwise_alignments.cc
[ 94%] Building CXX object modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/test_sequence_identity.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/test_sequence_identity.cc.o -MF CMakeFiles/ost_seq_alg_tests.dir/test_sequence_identity.cc.o.d -o CMakeFiles/ost_seq_alg_tests.dir/test_sequence_identity.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests/test_sequence_identity.cc
[ 95%] Building CXX object modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests.dir/test_consistency_checks.cc.o
...........cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests.dir/test_consistency_checks.cc.o -MF CMakeFiles/ost_mol_alg_tests.dir/test_consistency_checks.cc.o.d -o CMakeFiles/ost_mol_alg_tests.dir/test_consistency_checks.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests/test_consistency_checks.cc
..../usr/lib/python3.12/unittest/case.py:589: ResourceWarning: unclosed file <_io.BufferedReader name='/build/reproducible-path/openstructure-2.9.0/modules/base/tests/testfiles/enrichment-out.png'>
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./usr/lib/python3.12/unittest/case.py:589: ResourceWarning: unclosed file <_io.BufferedReader name='/build/reproducible-path/openstructure-2.9.0/modules/base/tests/testfiles/roc-same-val-out.png'>
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.................s........................
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/base/tests/CMakeFiles/test_log.py_run.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/openstructure-2.9.0/modules/base/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/base/tests/test_log.py"
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[ 96%] Building CXX object modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests.dir/test_partial_sec_struct_assignment.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests.dir/test_partial_sec_struct_assignment.cc.o -MF CMakeFiles/ost_mol_alg_tests.dir/test_partial_sec_struct_assignment.cc.o.d -o CMakeFiles/ost_mol_alg_tests.dir/test_partial_sec_struct_assignment.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests/test_partial_sec_struct_assignment.cc
[ 96%] Building CXX object modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/tests.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests.dir/tests.cc.o -MF CMakeFiles/ost_seq_alg_tests.dir/tests.cc.o.d -o CMakeFiles/ost_seq_alg_tests.dir/tests.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests/tests.cc
[ 96%] Building CXX object modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/test_topology.cc.o
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[ 96%] Building CXX object modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/test_forcefield.cc.o
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cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/tests.cc.o -MF CMakeFiles/ost_io_tests.dir/tests.cc.o.d -o CMakeFiles/ost_io_tests.dir/tests.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/tests/tests.cc
[ 96%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_star_parser.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_star_parser.cc.o -MF CMakeFiles/ost_io_tests.dir/test_star_parser.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_star_parser.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/tests/test_star_parser.cc
[ 96%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_mmcif_reader.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_mmcif_reader.cc.o -MF CMakeFiles/ost_io_tests.dir/test_mmcif_reader.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_mmcif_reader.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/tests/test_mmcif_reader.cc
[ 96%] Building CXX object modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests.dir/test_simulation.cc.o
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[ 96%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_mmcif_writer.cc.o
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[ 96%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_mmcif_info.cc.o
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/include -I/usr/include/eigen3 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -fPIC -MD -MT modules/io/tests/CMakeFiles/ost_io_tests.dir/test_mmcif_info.cc.o -MF CMakeFiles/ost_io_tests.dir/test_mmcif_info.cc.o.d -o CMakeFiles/ost_io_tests.dir/test_mmcif_info.cc.o -c /build/reproducible-path/openstructure-2.9.0/modules/io/tests/test_mmcif_info.cc
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[ 96%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_io_img.cc.o
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[ 96%] Building CXX object modules/io/tests/CMakeFiles/ost_io_tests.dir/test_exceptions.cc.o
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make  -f modules/bindings/tests/CMakeFiles/test_hhblits.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_hhblits.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_hhblits.py_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/bindings/tests/CMakeFiles/test_hhblits.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_hhblits.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 97%] running checks test_hhblits.py
cd /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests/test_hhblits.py"
.Compound library not available. Some functionality may not work as expected.
No HHblits installation found: skip unit tests
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 97%] Built target test_hhblits.py_run
make  -f modules/bindings/tests/CMakeFiles/test_blast.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_blast.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_blast.py_run.dir/DependInfo.cmake "--color="
make  -f modules/bindings/tests/CMakeFiles/test_kclust.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_kclust.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_kclust.py_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/bindings/tests/CMakeFiles/test_blast.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_blast.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/bindings/tests/CMakeFiles/test_kclust.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_kclust.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 97%] running checks test_blast.py
[ 97%] running checks test_kclust.py
cd /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests/test_blast.py"
cd /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests/test_kclust.py"
/build/reproducible-path/openstructure-2.9.0/modules/bindings/tests/test_blast.py:81: SyntaxWarning: invalid escape sequence '\d'
  re_v = re.compile('\d+\.\d+\.\d+')
Compound library not available. Some functionality may not work as expected.
make  -f modules/bindings/tests/CMakeFiles/test_naccess.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_naccess.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_naccess.py_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/bindings/tests/CMakeFiles/test_naccess.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_naccess.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
Compound library not available. Some functionality may not work as expected.
[ 97%] running checks test_naccess.py
cd /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests/test_naccess.py"
Compound library not available. Some functionality may not work as expected.
Could not find NACCESS, could not test binding...
.Could not find kClust executable: ignoring unit tests
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
.[ 97%] Built target test_naccess.py_run
make  -f modules/bindings/tests/CMakeFiles/test_cadscore.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_cadscore.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
Could not find blast executable: ignoring unit tests
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_cadscore.py_run.dir/DependInfo.cmake "--color="
.make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/bindings/tests/CMakeFiles/test_cadscore.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_cadscore.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 97%] running checks test_cadscore.py
cd /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests/test_cadscore.py"
.make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
.Compound library not available. Some functionality may not work as expected.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 97%] Built target test_kclust.py_run
make  -f modules/bindings/tests/CMakeFiles/test_tmtools.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_tmtools.py_run.dir/depend
.make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_tmtools.py_run.dir/DependInfo.cmake "--color="

----------------------------------------------------------------------
Ran 7 tests in 5.466s

OK
[ 97%] Built target test_blast.py_run
make  -f modules/bindings/tests/CMakeFiles/test_ialign.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_ialign.py_run.dir/depend
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/bindings/tests/CMakeFiles/test_tmtools.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_tmtools.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_ialign.py_run.dir/DependInfo.cmake "--color="
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/bindings/tests/CMakeFiles/test_ialign.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_ialign.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] running checks test_ialign.py
cd /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests/test_ialign.py"
[ 98%] running checks test_tmtools.py
cd /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests/test_tmtools.py"
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] Built target test_clustalw.py_run
make  -f modules/bindings/tests/CMakeFiles/test_lga.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_lga.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_lga.py_run.dir/DependInfo.cmake "--color="
Compound library not available. Some functionality may not work as expected.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/bindings/tests/CMakeFiles/test_lga.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_lga.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] running checks test_lga.py
cd /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests/test_lga.py"
make  -f modules/bindings/tests/CMakeFiles/test_hbplus.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_hbplus.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_hbplus.py_run.dir/DependInfo.cmake "--color="
Compound library not available. Some functionality may not work as expected.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/bindings/tests/CMakeFiles/test_hbplus.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_hbplus.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] running checks test_hbplus.py
cd /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests/test_hbplus.py"
sCompound library not available. Some functionality may not work as expected.
Compound library not available. Some functionality may not work as expected.
[ 98%] Linking CXX executable ../../../../tests/ost_seq_alg_tests
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_seq_alg_tests.dir/link.txt --verbose=1
[ 98%] Linking CXX executable ../../../../tests/ost_mol_tests
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_mol_tests.dir/link.txt --verbose=1
Could not find hbplus, could not test binding...
..make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] Built target test_hbplus.py_run
make  -f modules/bindings/tests/CMakeFiles/test_dockq.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_dockq.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/bindings/tests/CMakeFiles/test_dockq.py_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/bindings/tests/CMakeFiles/test_dockq.py_run.dir/build.make modules/bindings/tests/CMakeFiles/test_dockq.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
.[ 98%] running checks test_dockq.py

----------------------------------------------------------------------
Ran 1 test in 0.239s

OK
Could not find ialign master perl script: ignoring unit tests
cd /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/bindings/tests/test_dockq.py"
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file,CMakeFiles/ost_seq_alg_tests.dir/link.d CMakeFiles/ost_seq_alg_tests.dir/test_distance_analysis.cc.o CMakeFiles/ost_seq_alg_tests.dir/test_merge_pairwise_alignments.cc.o CMakeFiles/ost_seq_alg_tests.dir/test_sequence_identity.cc.o CMakeFiles/ost_seq_alg_tests.dir/tests.cc.o -o ../../../../tests/ost_seq_alg_tests   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../../stage/lib/libost_io.so.2.9.0 ../../../../stage/lib/libost_mol_alg.so.2.9.0 ../../../../stage/lib/libost_seq_alg.so.2.9.0 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../../stage/lib/libost_conop.so.2.9.0 ../../../../stage/lib/libost_db.so.2.9.0 ../../../../stage/lib/libost_seq.so.2.9.0 ../../../../stage/lib/libost_mol.so.2.9.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../../stage/lib/libost_img_alg.so.2.9.0 ../../../../stage/lib/libost_img.so.2.9.0 ../../../../stage/lib/libost_info.so.2.9.0 ../../../../stage/lib/libost_base.so.2.9.0 ../../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file,CMakeFiles/ost_mol_tests.dir/link.d CMakeFiles/ost_mol_tests.dir/test_atom_groups.cc.o CMakeFiles/ost_mol_tests.dir/test_chain.cc.o CMakeFiles/ost_mol_tests.dir/test_conn.cc.o CMakeFiles/ost_mol_tests.dir/test_coord_group.cc.o CMakeFiles/ost_mol_tests.dir/test_builder.cc.o CMakeFiles/ost_mol_tests.dir/test_delete.cc.o CMakeFiles/ost_mol_tests.dir/test_entity.cc.o CMakeFiles/ost_mol_tests.dir/test_ics.cc.o CMakeFiles/ost_mol_tests.dir/test_query.cc.o CMakeFiles/ost_mol_tests.dir/test_surface.cc.o CMakeFiles/ost_mol_tests.dir/test_residue.cc.o CMakeFiles/ost_mol_tests.dir/test_view.cc.o CMakeFiles/ost_mol_tests.dir/test_transfer_connectivity.cc.o CMakeFiles/ost_mol_tests.dir/test_view_op.cc.o CMakeFiles/ost_mol_tests.dir/tests.cc.o -o ../../../../tests/ost_mol_tests   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../../stage/lib/libost_mol.so.2.9.0 ../../../../stage/lib/libost_info.so.2.9.0 ../../../../stage/lib/libost_base.so.2.9.0 ../../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] Built target ost_seq_alg_tests
make  -f modules/conop/tests/CMakeFiles/test_processor.py_run.dir/build.make modules/conop/tests/CMakeFiles/test_processor.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/conop/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/tests/CMakeFiles/test_processor.py_run.dir/DependInfo.cmake "--color="
[ 98%] Built target ost_mol_tests
make  -f modules/conop/tests/CMakeFiles/test_complib.py_run.dir/build.make modules/conop/tests/CMakeFiles/test_complib.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/conop/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/tests/CMakeFiles/test_complib.py_run.dir/DependInfo.cmake "--color="
Compound library not available. Some functionality may not work as expected.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/conop/tests/CMakeFiles/test_processor.py_run.dir/build.make modules/conop/tests/CMakeFiles/test_processor.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/conop/tests/CMakeFiles/test_complib.py_run.dir/build.make modules/conop/tests/CMakeFiles/test_complib.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] running checks test_processor.py
cd /build/reproducible-path/openstructure-2.9.0/modules/conop/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/conop/tests/test_processor.py"
[ 98%] running checks test_complib.py
cd /build/reproducible-path/openstructure-2.9.0/modules/conop/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/conop/tests/test_complib.py"
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
.Compound library not available. Some functionality may not work as expected.

----------------------------------------------------------------------
Ran 1 test in 0.446s

OK
Could not find lga executable: ignoring unit tests
[ 98%] Built target test_ialign.py_run
make  -f modules/db/tests/CMakeFiles/test_linear_db.py_run.dir/build.make modules/db/tests/CMakeFiles/test_linear_db.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/db/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/db/tests/CMakeFiles/test_linear_db.py_run.dir/DependInfo.cmake "--color="
.
----------------------------------------------------------------------
Ran 3 tests in 2.646s

OK
Could not find tmalign executable: ignoring unit tests
Could not find tmalign executable: ignoring unit tests
Compound library not available. Some functionality may not work as expected.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/db/tests/CMakeFiles/test_linear_db.py_run.dir/build.make modules/db/tests/CMakeFiles/test_linear_db.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] running checks test_linear_db.py
cd /build/reproducible-path/openstructure-2.9.0/modules/db/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/db/tests/test_linear_db.py"
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
Could not find DockQ.py, could not test binding...
.
----------------------------------------------------------------------
Ran 1 test in 0.007s

OK
[ 98%] Built target test_lga.py_run
make  -f modules/geom/tests/CMakeFiles/test_geom.py_run.dir/build.make modules/geom/tests/CMakeFiles/test_geom.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/geom/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/geom/tests/CMakeFiles/test_geom.py_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/geom/tests/CMakeFiles/test_geom.py_run.dir/build.make modules/geom/tests/CMakeFiles/test_geom.py_run.dir/build
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
../build/reproducible-path/openstructure-2.9.0/modules/conop/tests/test_complib.py:71: UserWarning: Compound library not available. Some functionality may not work as expected.
  warnings.warn("Compound library not available. Some functionality may not work as expected.")
.[ 98%] Built target test_processor.py_run
make  -f modules/gfx/tests/CMakeFiles/test_gfx.py_run.dir/build.make modules/gfx/tests/CMakeFiles/test_gfx.py_run.dir/depend
[ 98%] Built target test_dockq.py_run
make  -f modules/io/tests/CMakeFiles/test_io_pdb.py_run.dir/build.make modules/io/tests/CMakeFiles/test_io_pdb.py_run.dir/depend
[ 98%] running checks test_geom.py
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/io/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests/CMakeFiles/test_io_pdb.py_run.dir/DependInfo.cmake "--color="
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/modules/geom/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/geom/tests/test_geom.py"
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/gfx/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/gfx/tests/CMakeFiles/test_gfx.py_run.dir/DependInfo.cmake "--color="
[ 98%] Built target test_tmtools.py_run
make  -f modules/io/tests/CMakeFiles/test_io_mmcif.py_run.dir/build.make modules/io/tests/CMakeFiles/test_io_mmcif.py_run.dir/depend
Compound library not available. Some functionality may not work as expected.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/io/tests/CMakeFiles/test_io_pdb.py_run.dir/build.make modules/io/tests/CMakeFiles/test_io_pdb.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/io/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests/CMakeFiles/test_io_mmcif.py_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/gfx/tests/CMakeFiles/test_gfx.py_run.dir/build.make modules/gfx/tests/CMakeFiles/test_gfx.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] running checks test_gfx.py
[ 98%] running checks test_io_pdb.py
cd /build/reproducible-path/openstructure-2.9.0/modules/gfx/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/gfx/tests/test_gfx.py"
cd /build/reproducible-path/openstructure-2.9.0/modules/io/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/io/tests/test_io_pdb.py"
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/io/tests/CMakeFiles/test_io_mmcif.py_run.dir/build.make modules/io/tests/CMakeFiles/test_io_mmcif.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
.[ 98%] running checks test_io_mmcif.py
cd /build/reproducible-path/openstructure-2.9.0/modules/io/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/io/tests/test_io_mmcif.py"
Compound library not available. Some functionality may not work as expected.
....
----------------------------------------------------------------------
Ran 8 tests in 1.020s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.042s

OK
Compound library not available. Some functionality may not work as expected.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
....[ 98%] Built target test_complib.py_run
....make  -f modules/io/tests/CMakeFiles/test_io_omf.py_run.dir/build.make modules/io/tests/CMakeFiles/test_io_omf.py_run.dir/depend

----------------------------------------------------------------------
Ran 8 tests in 0.013s

OK
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
Compound library not available. Some functionality may not work as expected.
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/io/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests/CMakeFiles/test_io_omf.py_run.dir/DependInfo.cmake "--color="
[ 98%] Built target test_linear_db.py_run
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/io/tests/CMakeFiles/test_io_omf.py_run.dir/build.make modules/io/tests/CMakeFiles/test_io_omf.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/io/tests/CMakeFiles/test_io_sdf.py_run.dir/build.make modules/io/tests/CMakeFiles/test_io_sdf.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/io/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests/CMakeFiles/test_io_sdf.py_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
.[ 98%] running checks test_io_omf.py
cd /build/reproducible-path/openstructure-2.9.0/modules/io/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/io/tests/test_io_omf.py"
.Compound library not available. Some functionality may not work as expected.
..s
----------------------------------------------------------------------
Ran 5 tests in 0.050s

OK (skipped=1)
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] Built target test_geom.py_run
make  -f modules/io/tests/CMakeFiles/test_io_sdf.py_run.dir/build.make modules/io/tests/CMakeFiles/test_io_sdf.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/base/tests/CMakeFiles/ost_mol_tests_run.dir/build.make modules/mol/base/tests/CMakeFiles/ost_mol_tests_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/tests/CMakeFiles/ost_mol_tests_run.dir/DependInfo.cmake "--color="
[ 98%] running checks test_io_sdf.py
cd /build/reproducible-path/openstructure-2.9.0/modules/io/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/io/tests/test_io_sdf.py"
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/base/tests/CMakeFiles/ost_mol_tests_run.dir/build.make modules/mol/base/tests/CMakeFiles/ost_mol_tests_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] running checks for module mol
cd /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/tests/ost_mol_tests
Compound library not available. Some functionality may not work as expected.
Compound library not available. Some functionality may not work as expected.
Running 71 test cases...

*** No errors detected
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] Built target test_io_pdb.py_run
make  -f modules/mol/base/tests/CMakeFiles/test_invalid.py_run.dir/build.make modules/mol/base/tests/CMakeFiles/test_invalid.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/base/tests/CMakeFiles/test_invalid.py_run.dir/DependInfo.cmake "--color="
[ 98%] Built target ost_mol_tests_run
make  -f modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests_run.dir/build.make modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/base/tests/CMakeFiles/test_invalid.py_run.dir/build.make modules/mol/base/tests/CMakeFiles/test_invalid.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests_run.dir/build.make modules/mol/alg/tests/CMakeFiles/ost_mol_alg_tests_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] running checks test_invalid.py
cd /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/mol/base/tests/test_invalid.py"
[ 98%] running checks for module mol_alg
cd /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/tests/ost_mol_alg_tests
......
----------------------------------------------------------------------
Ran 6 tests in 0.003s

OK
.No citation for identifier '1' found. Couldn't set author list.
SEQRES requires a valid compound library to handle non standard compounds. Their One letter codes will be set to X.
..No compound library available. Ignoring test_stereochemistry.py tests.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
Running 4 test cases...

*** No errors detected
[ 98%] Built target test_gfx.py_run
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/alg/tests/CMakeFiles/test_pdbize.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_pdbize.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_pdbize.py_run.dir/DependInfo.cmake "--color="
Compound library not available. Some functionality may not work as expected.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] Built target ost_mol_alg_tests_run
make  -f modules/mol/alg/tests/CMakeFiles/test_convenient_superpose.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_convenient_superpose.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_convenient_superpose.py_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/alg/tests/CMakeFiles/test_pdbize.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_pdbize.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] Built target test_io_omf.py_run
make  -f modules/mol/alg/tests/CMakeFiles/test_hbond.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_hbond.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_hbond.py_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] running checks test_pdbize.py
make  -f modules/mol/alg/tests/CMakeFiles/test_convenient_superpose.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_convenient_superpose.py_run.dir/build
cd /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests/test_pdbize.py"
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
.....
----------------------------------------------------------------------
Ran 5 tests in 0.049s

OK
[ 98%] running checks test_convenient_superpose.py
Compound library not available. Some functionality may not work as expected.
cd /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests/test_convenient_superpose.py"
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/alg/tests/CMakeFiles/test_hbond.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_hbond.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
.......
----------------------------------------------------------------------
Ran 7 tests in 0.016s

OK
Compound library not available. Some functionality may not work as expected.
[ 98%] running checks test_hbond.py
cd /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests/test_hbond.py"
SEQRES requires a valid compound library to handle non standard compounds. Their One letter codes will be set to X.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] Built target test_io_sdf.py_run
make  -f modules/mol/alg/tests/CMakeFiles/test_accessibility.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_accessibility.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_accessibility.py_run.dir/DependInfo.cmake "--color="
[ 98%] Built target test_invalid.py_run
make  -f modules/mol/alg/tests/CMakeFiles/test_sec_struct.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_sec_struct.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_sec_struct.py_run.dir/DependInfo.cmake "--color="
Compound library not available. Some functionality may not work as expected.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/alg/tests/CMakeFiles/test_accessibility.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_accessibility.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
.make  -f modules/mol/alg/tests/CMakeFiles/test_sec_struct.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_sec_struct.py_run.dir/build
....make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
...
----------------------------------------------------------------------
Ran 8 tests in 0.063s

OK
[ 98%] running checks test_accessibility.py
cd /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests/test_accessibility.py"
[ 98%] running checks test_sec_struct.py
cd /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests/test_sec_struct.py"
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
Compound library not available. Some functionality may not work as expected.
Compound library not available. Some functionality may not work as expected.
[ 98%] Built target test_pdbize.py_run
make  -f modules/mol/alg/tests/CMakeFiles/test_lddt.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_lddt.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_lddt.py_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/alg/tests/CMakeFiles/test_lddt.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_lddt.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] running checks test_lddt.py
cd /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests/test_lddt.py"
..
----------------------------------------------------------------------
Ran 2 tests in 0.100s

OK
.make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
ss
----------------------------------------------------------------------
Ran 1 test in 0.008s

OK (skipped=1)
[ 98%] Built target test_hbond.py_run
make  -f modules/mol/alg/tests/CMakeFiles/test_qsscore.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_qsscore.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_qsscore.py_run.dir/DependInfo.cmake "--color="
Compound library not available. Some functionality may not work as expected.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/alg/tests/CMakeFiles/test_qsscore.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_qsscore.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] running checks test_qsscore.py
cd /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests/test_qsscore.py"
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] Built target test_sec_struct.py_run
make  -f modules/mol/alg/tests/CMakeFiles/test_stereochemistry.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_stereochemistry.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_stereochemistry.py_run.dir/DependInfo.cmake "--color="
Compound library not available. Some functionality may not work as expected.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/alg/tests/CMakeFiles/test_stereochemistry.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_stereochemistry.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] running checks test_stereochemistry.py
cd /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests/test_stereochemistry.py"
Compound library not available. Some functionality may not work as expected.
No compound lib available. Ignoring test_qsscore.py tests.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/alg/tests/CMakeFiles/test_contact_score.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_contact_score.py_run.dir/depend
.make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_contact_score.py_run.dir/DependInfo.cmake "--color="
[ 98%] Built target test_qsscore.py_run
make  -f modules/mol/alg/tests/CMakeFiles/test_biounit.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_biounit.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_biounit.py_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/alg/tests/CMakeFiles/test_contact_score.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_contact_score.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] running checks test_contact_score.py
cd /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests/test_contact_score.py"
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/alg/tests/CMakeFiles/test_biounit.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_biounit.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] running checks test_biounit.py
cd /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests/test_biounit.py"
No compound library available. Ignoring test_stereochemistry.py tests.
Compound library not available. Some functionality may not work as expected.
Compound library not available. Some functionality may not work as expected.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] Built target test_stereochemistry.py_run
make  -f modules/mol/alg/tests/CMakeFiles/test_ost_dockq.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_ost_dockq.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_ost_dockq.py_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/alg/tests/CMakeFiles/test_ost_dockq.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_ost_dockq.py_run.dir/build
No compound library available. Ignoring test_lddt.py tests.
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
.[ 98%] running checks test_ost_dockq.py
cd /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests/test_ost_dockq.py"
Ignoring struct_ref_seq_dif with missing data item seq_num
Ignoring struct_ref_seq_dif with missing data item seq_num
SEQRES requires a valid compound library to handle non standard compounds. Their One letter codes will be set to X.
unknown residue 'ACE' in SEQRES record. Setting one-letter-code to 'X'
Compound library not available. Some functionality may not work as expected.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] Built target test_lddt.py_run
make  -f modules/mol/alg/tests/CMakeFiles/test_bblddt.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_bblddt.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/alg/tests/CMakeFiles/test_bblddt.py_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/alg/tests/CMakeFiles/test_bblddt.py_run.dir/build.make modules/mol/alg/tests/CMakeFiles/test_bblddt.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
.[ 98%] running checks test_bblddt.py
cd /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/mol/alg/tests/test_bblddt.py"
..Compound library not available. Some functionality may not work as expected.
SEQRES requires a valid compound library to handle non standard compounds. Their One letter codes will be set to X.
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'LYZ' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
unknown residue 'HYP' in SEQRES record. Setting one-letter-code to 'X'
.
----------------------------------------------------------------------
Ran 1 test in 1.606s

OK
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
No compound lib available. Ignoring contact_score.py tests.
[ 98%] Built target test_biounit.py_run
make  -f modules/mol/mm/tests/CMakeFiles/test_antechamber.py_run.dir/build.make modules/mol/mm/tests/CMakeFiles/test_antechamber.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/tests/CMakeFiles/test_antechamber.py_run.dir/DependInfo.cmake "--color="
.make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/mm/tests/CMakeFiles/test_antechamber.py_run.dir/build.make modules/mol/mm/tests/CMakeFiles/test_antechamber.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] running checks test_antechamber.py
cd /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/tests/test_antechamber.py"
.Compound library not available. Some functionality may not work as expected.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[ 98%] Built target test_contact_score.py_run
make  -f modules/seq/base/tests/CMakeFiles/test_seq.py_run.dir/build.make modules/seq/base/tests/CMakeFiles/test_seq.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/base/tests/CMakeFiles/test_seq.py_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/seq/base/tests/CMakeFiles/test_seq.py_run.dir/build.make modules/seq/base/tests/CMakeFiles/test_seq.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
..SEQRES requires a valid compound library to handle non standard compounds. Their One letter codes will be set to X.
No SEQRES found for chain 'A'. Most likely the entity_poly_seq category was missing from the input file.
No SEQRES found for chain 'B'. Most likely the entity_poly_seq category was missing from the input file.
No SEQRES found for chain 'C'. Most likely the entity_poly_seq category was missing from the input file.
......s
----------------------------------------------------------------------
Ran 12 tests in 9.357s

OK (skipped=1)
[100%] running checks test_seq.py
cd /build/reproducible-path/openstructure-2.9.0/modules/seq/base/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/seq/base/tests/test_seq.py"
.
----------------------------------------------------------------------
Ran 9 tests in 6.991s

OK
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] Built target test_io_mmcif.py_run
make  -f modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests_run.dir/build.make modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests_run.dir/DependInfo.cmake "--color="
Compound library not available. Some functionality may not work as expected.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests_run.dir/build.make modules/seq/alg/tests/CMakeFiles/ost_seq_alg_tests_run.dir/build
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
.No compound lib available. Ignoring test_bblddt.py tests.
[100%] running checks for module seq_alg
cd /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/tests/ost_seq_alg_tests
[100%] Built target test_convenient_superpose.py_run
.make  -f modules/seq/alg/tests/CMakeFiles/test_renumber.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_renumber.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests/CMakeFiles/test_renumber.py_run.dir/DependInfo.cmake "--color="
.
----------------------------------------------------------------------
Ran 3 tests in 0.229s

OK
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/seq/alg/tests/CMakeFiles/test_renumber.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_renumber.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] running checks test_renumber.py
cd /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests/test_renumber.py"
Running 19 test cases...

*** No errors detected
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] Built target test_antechamber.py_run
make  -f modules/seq/alg/tests/CMakeFiles/test_local_align.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_local_align.py_run.dir/depend
[100%] Built target ost_seq_alg_tests_run
make  -f modules/seq/alg/tests/CMakeFiles/test_global_align.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_global_align.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests/CMakeFiles/test_local_align.py_run.dir/DependInfo.cmake "--color="
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests/CMakeFiles/test_global_align.py_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
......[100%] Built target test_bblddt.py_run
make  -f modules/seq/alg/tests/CMakeFiles/test_semiglobal_align.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_semiglobal_align.py_run.dir/depend
Compound library not available. Some functionality may not work as expected.
........
----------------------------------------------------------------------
Ran 14 tests in 0.043s

OK
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests/CMakeFiles/test_semiglobal_align.py_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/seq/alg/tests/CMakeFiles/test_local_align.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_local_align.py_run.dir/build
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/seq/alg/tests/CMakeFiles/test_global_align.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_global_align.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/seq/alg/tests/CMakeFiles/test_semiglobal_align.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_semiglobal_align.py_run.dir/build
[100%] running checks test_local_align.py
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests/test_local_align.py"
[100%] running checks test_global_align.py
cd /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests/test_global_align.py"
[100%] running checks test_semiglobal_align.py
cd /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests/test_semiglobal_align.py"
Compound library not available. Some functionality may not work as expected.
Compound library not available. Some functionality may not work as expected.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] Built target test_seq.py_run
make  -f modules/seq/alg/tests/CMakeFiles/test_weight_matrix.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_weight_matrix.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests/CMakeFiles/test_weight_matrix.py_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/seq/alg/tests/CMakeFiles/test_weight_matrix.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_weight_matrix.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
...
----------------------------------------------------------------------
Ran 3 tests in 0.008s

OK
[100%] running checks test_weight_matrix.py
cd /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests/test_weight_matrix.py"
Compound library not available. Some functionality may not work as expected.
Compound library not available. Some functionality may not work as expected.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] Built target test_global_align.py_run
make  -f modules/seq/alg/tests/CMakeFiles/test_alignment_from_chain_view.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_alignment_from_chain_view.py_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/seq/alg/tests/CMakeFiles/test_alignment_from_chain_view.py_run.dir/DependInfo.cmake "--color="
.
----------------------------------------------------------------------
Ran 1 test in 4.303s

OK
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/seq/alg/tests/CMakeFiles/test_alignment_from_chain_view.py_run.dir/build.make modules/seq/alg/tests/CMakeFiles/test_alignment_from_chain_view.py_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] running checks test_alignment_from_chain_view.py
cd /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests && sh -c "PYTHONPATH=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib/python3.12/dist-packages/  /usr/bin/python3 /build/reproducible-path/openstructure-2.9.0/modules/seq/alg/tests/test_alignment_from_chain_view.py"
.....
----------------------------------------------------------------------
Ran 2 tests in 0.000s

OK
.....
----------------------------------------------------------------------
Ran 8 tests in 0.424s

OK
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
Compound library not available. Some functionality may not work as expected.
[100%] Built target test_weight_matrix.py_run
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] Built target test_ost_dockq.py_run
...
----------------------------------------------------------------------
Ran 3 tests in 0.034s

OK
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] Built target test_renumber.py_run
.
----------------------------------------------------------------------
Ran 1 test in 0.039s

OK
.
----------------------------------------------------------------------
Ran 1 test in 0.015s

OK
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] Built target test_alignment_from_chain_view.py_run
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] Built target test_local_align.py_run
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] Built target test_semiglobal_align.py_run
[100%] Linking CXX executable ../../../tests/ost_conop_tests
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_conop_tests.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file,CMakeFiles/ost_conop_tests.dir/link.d CMakeFiles/ost_conop_tests.dir/test_amino_acids.cc.o CMakeFiles/ost_conop_tests.dir/test_heuristic_conop.cc.o CMakeFiles/ost_conop_tests.dir/tests.cc.o CMakeFiles/ost_conop_tests.dir/test_rule_based_conop.cc.o CMakeFiles/ost_conop_tests.dir/helper.cc.o -o ../../../tests/ost_conop_tests   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../stage/lib/libost_conop.so.2.9.0 ../../../stage/lib/libost_db.so.2.9.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so ../../../stage/lib/libost_seq.so.2.9.0 ../../../stage/lib/libost_mol.so.2.9.0 ../../../stage/lib/libost_info.so.2.9.0 ../../../stage/lib/libost_base.so.2.9.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] Built target ost_conop_tests
make  -f modules/conop/tests/CMakeFiles/ost_conop_tests_run.dir/build.make modules/conop/tests/CMakeFiles/ost_conop_tests_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/conop/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/conop/tests/CMakeFiles/ost_conop_tests_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/conop/tests/CMakeFiles/ost_conop_tests_run.dir/build.make modules/conop/tests/CMakeFiles/ost_conop_tests_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] running checks for module conop
cd /build/reproducible-path/openstructure-2.9.0/modules/conop/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/tests/ost_conop_tests
Running 18 test cases...
unable to open database file
unable to open database file
unable to open database file
unable to open database file
unable to open database file
unable to open database file
unable to open database file
unable to open database file
unable to open database file

*** No errors detected
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] Built target ost_conop_tests_run
.
----------------------------------------------------------------------
Ran 2 tests in 20.171s

OK (skipped=1)
Could not find NACCESS, could not compare Accessiblity function...
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] Built target test_accessibility.py_run
.
----------------------------------------------------------------------
Ran 2 tests in 83.851s

OK (skipped=1)
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] Built target test_cadscore.py_run
[100%] Linking CXX executable ../../../../tests/ost_mol_mm_tests
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_mol_mm_tests.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file,CMakeFiles/ost_mol_mm_tests.dir/link.d CMakeFiles/ost_mol_mm_tests.dir/test_interaction.cc.o CMakeFiles/ost_mol_mm_tests.dir/test_block.cc.o CMakeFiles/ost_mol_mm_tests.dir/test_block_modifiers.cc.o CMakeFiles/ost_mol_mm_tests.dir/test_topology.cc.o CMakeFiles/ost_mol_mm_tests.dir/test_forcefield.cc.o CMakeFiles/ost_mol_mm_tests.dir/test_simulation.cc.o CMakeFiles/ost_mol_mm_tests.dir/tests.cc.o -o ../../../../tests/ost_mol_mm_tests   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../../stage/lib/libost_mol_mm.so.2.9.0 ../../../../stage/lib/libost_io.so.2.9.0 ../../../../stage/lib/libost_mol_alg.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 ../../../../stage/lib/libost_conop.so.2.9.0 ../../../../stage/lib/libost_db.so.2.9.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../../stage/lib/libost_seq_alg.so.2.9.0 ../../../../stage/lib/libost_seq.so.2.9.0 ../../../../stage/lib/libost_mol.so.2.9.0 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../../stage/lib/libost_img_alg.so.2.9.0 ../../../../stage/lib/libost_img.so.2.9.0 ../../../../stage/lib/libost_info.so.2.9.0 ../../../../stage/lib/libost_base.so.2.9.0 ../../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libOpenMM.so
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] Built target ost_mol_mm_tests
make  -f modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests_run.dir/build.make modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests_run.dir/build.make modules/mol/mm/tests/CMakeFiles/ost_mol_mm_tests_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] running checks for module mol_mm
cd /build/reproducible-path/openstructure-2.9.0/modules/mol/mm/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/tests/ost_mol_mm_tests
Running 13 test cases...

*** No errors detected
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] Built target ost_mol_mm_tests_run
[100%] Linking CXX executable ../../../tests/ost_io_tests
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ost_io_tests.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openstructure-2.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-attributes -O3 -DNDEBUG -fno-strict-aliasing -Wl,-z,relro -Wl,--dependency-file,CMakeFiles/ost_io_tests.dir/link.d CMakeFiles/ost_io_tests.dir/test_clustal.cc.o CMakeFiles/ost_io_tests.dir/test_io_pdb.cc.o CMakeFiles/ost_io_tests.dir/test_io_crd.cc.o CMakeFiles/ost_io_tests.dir/test_io_dcd.cc.o CMakeFiles/ost_io_tests.dir/test_io_sdf.cc.o CMakeFiles/ost_io_tests.dir/test_io_sdf_v3000.cc.o CMakeFiles/ost_io_tests.dir/test_io_sequence_profile.cc.o CMakeFiles/ost_io_tests.dir/test_pir.cc.o CMakeFiles/ost_io_tests.dir/test_iomanager.cc.o CMakeFiles/ost_io_tests.dir/tests.cc.o CMakeFiles/ost_io_tests.dir/test_star_parser.cc.o CMakeFiles/ost_io_tests.dir/test_mmcif_reader.cc.o CMakeFiles/ost_io_tests.dir/test_mmcif_writer.cc.o CMakeFiles/ost_io_tests.dir/test_mmcif_info.cc.o CMakeFiles/ost_io_tests.dir/test_io_img.cc.o CMakeFiles/ost_io_tests.dir/test_exceptions.cc.o -o ../../../tests/ost_io_tests   -L/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib  -Wl,-rpath,/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage/lib /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../stage/lib/libost_io.so.2.9.0 ../../../stage/lib/libost_mol_alg.so.2.9.0 ../../../stage/lib/libost_conop.so.2.9.0 ../../../stage/lib/libost_db.so.2.9.0 /usr/lib/x86_64-linux-gnu/libsqlite3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_thread.so.1.83.0 ../../../stage/lib/libost_seq_alg.so.2.9.0 ../../../stage/lib/libost_seq.so.2.9.0 ../../../stage/lib/libost_mol.so.2.9.0 /usr/lib/x86_64-linux-gnu/libparasail.so ../../../stage/lib/libost_img_alg.so.2.9.0 ../../../stage/lib/libost_img.so.2.9.0 ../../../stage/lib/libost_info.so.2.9.0 ../../../stage/lib/libost_base.so.2.9.0 ../../../stage/lib/libost_geom.so.2.9.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_atomic.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.15 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.15 /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0 /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libz.so
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] Built target ost_io_tests
make  -f modules/io/tests/CMakeFiles/ost_io_tests_run.dir/build.make modules/io/tests/CMakeFiles/ost_io_tests_run.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/modules/io/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/modules/io/tests/CMakeFiles/ost_io_tests_run.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f modules/io/tests/CMakeFiles/ost_io_tests_run.dir/build.make modules/io/tests/CMakeFiles/ost_io_tests_run.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] running checks for module io
cd /build/reproducible-path/openstructure-2.9.0/modules/io/tests && env OST_ROOT=/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/stage /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/tests/ost_io_tests
Running 182 test cases...
unable to open database file
WARNING: skipping SEQRES import unit test. Compound lib is required
unable to open database file
WARNING: skipping mmcif_entity_poly_tests unit test. Compound library is required
unable to open database file
unable to open database file
unable to open database file
unable to open database file
unable to open database file

*** No errors detected
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] Built target ost_io_tests_run
make  -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/depend
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
cd /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0 /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/CMakeFiles/check.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make  -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/build
make[4]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'CMakeFiles/check.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
[100%] Built target check
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu/CMakeFiles 0
make[2]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[1]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
   create-stamp debian/debhelper-build-stamp
   dh_prep
   dh_installdirs
   debian/rules override_dh_auto_install
make[1]: Entering directory '/build/reproducible-path/openstructure-2.9.0'
dh_auto_install
	cd obj-x86_64-linux-gnu && make -j20 install DESTDIR=/build/reproducible-path/openstructure-2.9.0/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[2]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
/usr/bin/cmake -S/build/reproducible-path/openstructure-2.9.0 -B/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 preinstall
make[3]: Entering directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'preinstall'.
make[3]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "Release"
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_base.so.2.9.0
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_base.so.2.9
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_base.so.2.9.0" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_base.so
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/export_helper/generic_property_def.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/export_helper/pair_to_tuple_conv.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/export_helper/vec_to_list_conv.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/test_utils/compare_files.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./generic_property.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./integrity_error.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./invalid_handle.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./ptr_observer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./log.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./log_sink.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./profile.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./dyn_cast.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./stdint.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./stdint_msc.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./range.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./module_config.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./units.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./message.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./platform.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./string_ref.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./pod_vector.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./fixed_string.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./tri_matrix.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./boost_filesystem_helper.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./paged_array.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/_ost_base.so
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/_ost_base.so" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/./settings.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/./stutil.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/./table.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/./table_selector.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/./xmlrunner.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/./testutils.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/./settings.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/./stutil.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/./table.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/./table_selector.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/./xmlrunner.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/./testutils.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/__init__.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_bindings.so.2.9.0
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_bindings.so.2.9
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_bindings.so.2.9.0" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_bindings.so
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/bindings/./wrap_tmalign.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/_ost_bindings.so
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/_ost_bindings.so" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./__init__.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./lga.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./hbplus.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./msms.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./tmtools.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./dssp.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./clustalw.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./utils.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./naccess.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./hhblits.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./hhblits2.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./hhblits3.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./blast.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./cadscore.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./kclust.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./ialign.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./mmseqs2.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./dockq.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./__init__.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./lga.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./hbplus.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./msms.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./tmtools.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./dssp.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./clustalw.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./utils.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./naccess.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./hhblits.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./hhblits2.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./hhblits3.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./blast.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./cadscore.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./kclust.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./ialign.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./mmseqs2.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/bindings/./dockq.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./base.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./config.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./dllexport.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/./version.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_conop.so.2.9.0
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_conop.so.2.9
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_conop.so.2.9.0" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_conop.so
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/conop/./conop.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/conop/./processor.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/conop/./amino_acids.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/conop/./diag.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/conop/./model_check.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/conop/./heuristic.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/conop/./compound.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/conop/./compound_lib.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/conop/./module_config.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/conop/./rule_based.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/conop/./minimal_compound_lib.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/conop/./compound_lib_base.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/conop/./ring_finder.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/bin/chemdict_tool
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/bin/chemdict_tool" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/conop/_ost_conop.so
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/conop/_ost_conop.so" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/conop/./__init__.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/conop/./cleanup.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/conop/./__init__.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/conop/./cleanup.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_db.so.2.9.0
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_db.so.2.9
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_db.so.2.9.0" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_db.so
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/db/./sqlite_wrap.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/db/./sqlite_conv.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/db/./module_config.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/db/./linear_indexer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/db/./binary_container.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/db/./extract_data_helper.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/db/_ost_db.so
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/db/_ost_db.so" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/db/./__init__.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/db/./__init__.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_geom.so.2.9.0
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_geom.so.2.9
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_geom.so.2.9.0" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_geom.so
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/export_helper/vector.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./def.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./exc.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./geom.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./mat.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./mat2.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./mat3.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./mat4.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./vec.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./vec2.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./vec3.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./vec4.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./vecmat_op.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./vecmat2_op.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./vecmat3_op.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./vecmat4_op.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./circular_iterator.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./constants.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./composite.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./composite2.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./composite3.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./composite_op.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./composite2_op.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./composite3_op.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./aligned_cuboid.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./vec_mat_predicates.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./quat.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./transform.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./point_cloud.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/geom/./module_config.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/geom/_ost_geom.so
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/geom/_ost_geom.so" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/geom/./__init__.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/geom/./__init__.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_gfx.so.2.9.0
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_gfx.so.2.9
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_gfx.so.2.9.0" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_gfx.so
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/map_iso_gen.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/map_iso_gen_s.hh
-- Up-to-date: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/map_iso_gen_s.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/map_iso_spec.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/map_octree.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/octree_isocont.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/cartoon_renderer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/custom_renderer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/cpk_renderer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/debug_renderer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/simple_renderer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/sline_renderer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/trace_renderer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/line_trace_renderer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/backbone_trace.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/entity_detail.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/entity_renderer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/trace_renderer_base.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/connect_renderer_base.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/mapped_property.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/entity_renderer_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/tabulated_trig.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/impl/fast_spheres.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/render_options/render_options.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/render_options/line_render_options.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/render_options/custom_render_options.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/render_options/cpk_render_options.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/render_options/simple_render_options.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/render_options/sline_render_options.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/render_options/line_trace_render_options.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/render_options/cartoon_render_options.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/render_options/trace_render_options.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/color_ops/color_op.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/color_ops/by_element_color_op.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/color_ops/by_chain_color_op.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/color_ops/uniform_color_op.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/color_ops/gradient_color_op.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/color_ops/entity_view_color_op.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/color_ops/basic_gradient_color_op.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/color_ops/gradient_level_color_op.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/color_ops/map_handle_color_op.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./render_pass.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./bitmap_io.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./collada_exporter.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./color.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./entity.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./entity_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./gl_helper.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./gfx.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./gfx_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./gfx_node.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./gfx_node_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./gfx_node_visitor.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./gfx_object_base.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./gfx_object.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./gfx_object_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./gfx_prim.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./symmetry_node.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./gfx_test_object.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./glwin_base.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./input.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./prim_list.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./scene.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./selection.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./surface.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./texture.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./vertex_array.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./vertex_array_helper.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./scene_observer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./gl_include.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./glext_include.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./render_mode.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./material.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./gradient.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./gradient_manager.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./module_config.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./primitives.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./povray_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./povray.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./exporter.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./exporter_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./gost_exporter.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./map_handle_color_op.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./map_iso.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./map_slab.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gfx/./map_iso_prop.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/textures/test_texture.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/textures/glyph_texture.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gfx/_ost_gfx.so
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gfx/_ost_gfx.so" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gfx/./__init__.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gfx/./py_gfx_obj.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gfx/./__init__.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gfx/./py_gfx_obj.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/scene/gradients.xml
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_gui.so.2.9.0
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_gui.so.2.9
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_gui.so.2.9.0" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_gui.so
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/tools/tool.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/tools/tool_option_group.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/tools/tool_options.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/tools/tool_bar.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/tools/selection_tool.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/tools/measure_tool.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/tools/tool_option.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/tools/tool_manager.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/tools/tool_options_widget.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/tools/manipulator.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/tools/tool_options_win.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/tools/mouse_event.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/tools/map_tool.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/sequence_viewer/align_properties_painter.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/sequence_viewer/base_row.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/sequence_viewer/background_painter.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/sequence_viewer/conservation_painter.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/sequence_viewer/painter.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/sequence_viewer/secstr_row.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/sequence_viewer/seq_secstr_painter.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/sequence_viewer/seq_selection_painter.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/sequence_viewer/seq_text_painter.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/sequence_viewer/sequence_delegate.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/sequence_viewer/sequence_model.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/sequence_viewer/sequence_row.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/sequence_viewer/sequence_search_bar.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/sequence_viewer/sequence_table_view.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/sequence_viewer/sequence_viewer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/sequence_viewer/tick_painter.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/sequence_viewer/title_row.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/sequence_viewer/alignment_view_object.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/sequence_viewer/base_view_object.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/sequence_viewer/sequence_view_object.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/main_thread_runner.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/output_redirector.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/completer_base.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/dir_model.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/gutter.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/path_completer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/python_context_parser.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/python_completer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/python_shell.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/python_shell_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/python_shell_widget.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/python_tokenizer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/python_syntax_highlighter.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/text_logger.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/python_interpreter.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/python_interpreter_worker.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/python_shell_text_document_layout.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/shell_history.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/state_machine.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/state.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/transition.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/python_shell/transition_guard.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/panels/button_bar.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/panels/drop_box.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/panels/panel_bar.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/panels/panel_manager.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/panels/bottom_bar.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/panels/button_box.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/panels/event_button.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/panels/panel_widget_container.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/panels/panel_bar_widget_holder.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/panels/side_bar.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/panels/splitter_panel_bar.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/panels/tabbed_panel_bar.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/scene_win/context_menu.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/scene_win/current_selection_node.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/scene_win/custom_part_node.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/scene_win/entity_node.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/scene_win/entity_part_node.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/scene_win/gfx_scene_node.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/scene_win/label_node.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/scene_win/root_node.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/scene_win/render_mode_node.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/scene_win/render_modes_node.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/scene_win/scene_node.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/scene_win/scene_win.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/scene_win/scene_win_model.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/messages/message_widget.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/messages/message_box_widget.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/messages/log_reader.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/argand.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/data_viewer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/data_viewer_panel.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/data_viewer_panel_base.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/draw_overlay.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/drawing_functions.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/fft_panel.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/info_panel.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/img2qt.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/mask_overlay.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/null_overlay.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/overlay.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/overlay_base.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/overlay_base_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/overlay_manager.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/overlay_manager_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/overlay_manager_gui.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/overlay_manager_observer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/pointlist_overlay.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/pointlist_overlay_base.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/strategies.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/strategies_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/data_viewer/viewer_normalizer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./file_browser.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./file_type_dialog.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./file_viewer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./gl_canvas.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./gl_win.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./scene_menu.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./gosty_app.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./admin.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./module_config.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./main.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./main_area.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./perspective.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./scene_selection.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./main_window.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./dock_widget.hh
-- Up-to-date: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./dock_widget.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./thin_splitter.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./widget.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./widget_geom_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./widget_pool.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./widget_registry.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./widget_state_saver.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/gui/./file_loader.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/openstructure/libexec/gosty
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/openstructure/libexec/gosty" to "$ORIGIN/../../lib"
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/gui/icons/add_icon.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/gui/icons/close_icon.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/gui/icons/critical_icon.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/gui/icons/delete_icon.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/gui/icons/distance_icon.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/gui/icons/find_icon.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/gui/icons/information_icon.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/gui/icons/map_icon.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/gui/icons/menubar_icon.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/gui/icons/rigid_body_manipulator_icon.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/gui/icons/selection_icon.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/gui/icons/show_sidebar_icon.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/gui/icons/site_icon.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/gui/icons/split_icon.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/gui/icons/warning_icon.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/gui/icons/refresh.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/gui/images/logo-small.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/_ost_gui.so
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/_ost_gui.so" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/__init__.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/color_options_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/color_select_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/combo_options_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/cpk_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/custom_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/gradient_editor_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/gradient_info_handler.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/gradient_list_model.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/gradient_preset_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/hsc_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/immutable_gradient_info_handler.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/immutable_preset_info_handler.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/init_inspector.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/inspector_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/map_level_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/preset.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/remote.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/preset_editor_list_model.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/preset_editor_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/preset_info_handler.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/preset_list_model.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/preset_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/render_mode_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/render_op.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/render_options_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/scene_observer_impl.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/scene_selection_helper.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/simple_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/sline_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/toolbar_options_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/trace_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/tube_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/uniform_color_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/visibility_op.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/line_trace_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/wireframe_widget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/query_editor.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/__init__.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/color_options_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/color_select_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/combo_options_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/cpk_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/custom_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/gradient_editor_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/gradient_info_handler.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/gradient_list_model.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/gradient_preset_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/hsc_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/immutable_gradient_info_handler.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/immutable_preset_info_handler.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/init_inspector.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/inspector_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/map_level_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/preset.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/remote.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/preset_editor_list_model.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/preset_editor_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/preset_info_handler.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/preset_list_model.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/preset_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/render_mode_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/render_op.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/render_options_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/scene_observer_impl.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/scene_selection_helper.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/simple_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/sline_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/toolbar_options_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/trace_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/tube_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/uniform_color_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/visibility_op.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/line_trace_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/wireframe_widget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/scene/query_editor.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/dng/__init__.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/dng/termuse.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/dng/superpositiondialog.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/dng/init.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/dng/menu.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/dng/__init__.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/dng/termuse.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/dng/superpositiondialog.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/dng/init.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/dng/menu.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/./__init__.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/./init_context_menu.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/./init_menubar.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/./init_spacenav.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/./init_splash.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/./trajectory_viewer.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/./helpwidget.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/./table.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/./gosty_startup.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/./__init__.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/./init_context_menu.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/./init_menubar.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/./init_spacenav.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/./init_splash.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/./trajectory_viewer.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/./helpwidget.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/./table.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/gui/./gosty_startup.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/scene/presets.xml
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/scene/icons/color_icon.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/scene/icons/preset_icon.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/scene/icons/render_icon.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/scene/icons/tool_icon.png
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_img.so.2.9.0
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_img.so.2.9
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_img.so.2.9.0" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_img.so
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/raster_image/raster_image.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/image_state/dispatch.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/image_state/image_state.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/image_state/image_state_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/image_state/image_state_base.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/image_state/image_state_base_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/image_state/image_state_def.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/image_state/image_state_factory.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/image_state/image_state_frequency_domain.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/image_state/image_state_half_frequency_domain.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/image_state/image_state_impl.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/image_state/image_state_spatial_domain.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/image_state/image_state_visitor.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/image_state/image_state_algorithm.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/image_state/image_state_visitor_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/image_state/index.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/image_state/type_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/image_state/value_holder.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./algorithm.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./circle_mask.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./composite_mask.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./data_algorithm.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./data_observer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./data_types.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./data.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./debug.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./dllexport.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./extent_iterator.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./extent_mask.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./extent.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./image_factory.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./image_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./image_handle_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./image_handle.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./image_impl.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./image_list.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./image_state_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./image_state.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./image.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./inverted_mask.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./map.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./mask_base_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./mask_base.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./mask_op.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./mask_visitor.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./mask.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./module_config.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./normalizer_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./normalizer_impl.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./null_data.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./observable.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./paste_impl.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./peak.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./phase.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./physical_units.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./pixel_sampling.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./point_list.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./point.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./polygon_mask.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./progress.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./size.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./spherical_mask.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./util.cc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./util.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./value_util.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./vecmat.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/./mask_info_convert.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/img/_ost_img.so
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/img/_ost_img.so" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/img/./__init__.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/img/./__init__.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_img_alg.so.2.9.0
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_img_alg.so.2.9
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_img_alg.so.2.9.0" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_img_alg.so
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./anisotropic.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./auto_correlate.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./clear.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./clip_min_max.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./conjugate.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./convolute.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./correlate.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./cross_correlate.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./density_slice.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./dft.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./fft.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./fftw_helper.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./fill.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./filter.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./fourier_filters.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./gaussian_gradient_magnitude.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./gaussian.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./gaussian_laplacian.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./highest_peak_search_3d.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./histogram.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./line_iterator.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./local_sigma_threshold.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./mask_image.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./negate.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./normalizer_factory.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./norm.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./normalizer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./norm_linear.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./norm_log.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./norm_od.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./power_spectrum.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./randomize.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./smooth_mask_image.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./stat.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./stat_accumulator.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./stat_min_max.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./threshold.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./transcendentals.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./transform.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./transform_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./alg_transform.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./alg_mirror.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./alg_shift.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./discrete_shrink.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./transformation_base.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./transformations.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./fractional_shift.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./module_config.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./polar.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./line_average.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/img/alg/./rscrosscorr.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/img/alg/_ost_img_alg.so
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/img/alg/_ost_img_alg.so" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/img/alg/./__init__.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/img/alg/./__init__.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_info.so.2.9.0
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_info.so.2.9
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_info.so.2.9.0" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_info.so
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/info/./info.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/info/./info_error.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/info/./info_impl.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/info/./info_impl_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/info/./info_handle.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/info/./info_group.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/info/./info_item.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/info/./info_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/info/./module_config.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/info/./info_path.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/info/./info_set.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/info/./info_visitor.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/info/./info_verbose_visitor.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/info/./item_type.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/info/./geom_info_conversion.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/info/./item_type_cast.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/info/_ost_info.so
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/info/_ost_info.so" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/info/./__init__.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/info/./__init__.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_io.so.2.9.0
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_io.so.2.9
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_io.so.2.9.0" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_io.so
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/chemdict_parser.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/star_parser.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/star_writer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/mmcif_reader.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/mmcif_info.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/mmcif_writer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/io_profile.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/dcd_io.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/entity_io_crd_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/entity_io_pqr_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/entity_io_mae_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/entity_io_mmcif_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/entity_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/pdb_reader.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/entity_io_pdb_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/pdb_writer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/entity_io_sdf_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/sdf_reader.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/sdf_writer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/save_entity.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/load_entity.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/surface_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/load_surface.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/surface_io_msms_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/pdb_str.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/sdf_str.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/mmcif_str.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/stereochemical_params_reader.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/mol/omf.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/img/load_map.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/img/map_io_df3_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/img/image_format.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/img/map_io_dx_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/img/map_io_spi_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/img/map_io_situs_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/img/map_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/img/map_io_mrc_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/img/map_io_dat_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/img/map_io_ipl_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/img/map_io_jpk_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/img/map_io_nanoscope_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/img/map_io_png_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/img/map_io_dm3_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/img/map_io_tiff_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/img/tiff_util.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/img/jpk_util.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/seq/sequence_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/seq/fasta_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/seq/pir_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/seq/promod_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/seq/profile_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/seq/hhm_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/seq/pssm_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/seq/clustal_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/seq/load.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/seq/save.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./binary_data_sink.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./io_manager.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./binary_data_source.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./module_config.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./container_serialization.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./swap_util.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./io_utils.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./io_exception.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./convert.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./converting_streams.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./formatted_line.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./chemdict_parser.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./star_parser.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./star_writer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./mmcif_reader.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./mmcif_info.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./mmcif_writer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./io_profile.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./dcd_io.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./entity_io_crd_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./entity_io_pqr_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./entity_io_mae_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./entity_io_mmcif_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./entity_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./pdb_reader.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./entity_io_pdb_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./pdb_writer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./entity_io_sdf_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./sdf_reader.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./sdf_writer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./save_entity.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./load_entity.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./surface_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./load_surface.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./surface_io_msms_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./pdb_str.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./sdf_str.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./mmcif_str.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./stereochemical_params_reader.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./omf.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./sequence_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./fasta_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./pir_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./promod_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./profile_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./hhm_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./pssm_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./clustal_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./load.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./save.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./load_map.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./map_io_df3_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./image_format.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./map_io_dx_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./map_io_spi_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./map_io_situs_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./map_io_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./map_io_mrc_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./map_io_dat_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./map_io_ipl_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./map_io_jpk_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./map_io_nanoscope_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./map_io_png_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./map_io_dm3_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./map_io_tiff_handler.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./tiff_util.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/io/./jpk_util.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/io/_ost_io.so
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/io/_ost_io.so" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/io/./__init__.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/io/./remote.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/io/./repository.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/io/./__init__.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/io/./remote.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/io/./repository.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_mol.so.2.9.0
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_mol.so.2.9
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_mol.so.2.9.0" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_mol.so
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/pointer_iterator.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/atom_group.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/atom_prop.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/atom_impl.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/atom_impl_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/chain_impl.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/chain_impl_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/connector_impl.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/connector_impl_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/dihedral.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/entity_impl.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/entity_impl_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/fragment_impl.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/fragment_impl_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/query_ast.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/query_ast_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/query_impl.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/query_impl_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/residue_impl.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/residue_impl_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/surface_impl.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/surface_impl_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/torsion_impl.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/impl/torsion_impl_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./atom_base.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./atom_handle.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./atom_view.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./bond_handle.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./bond_table.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./chain_base.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./chain_handle.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./chain_view.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./chain_type.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./chem_class.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./chem_type.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./coord_group.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./coord_source.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./in_mem_coord_source.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./coord_frame.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./editor_base.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./editor_type_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./mol.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./entity_base.hh
-- Up-to-date: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./entity_base.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./entity_handle.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./entity_observer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./entity_observer_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./entity_property_mapper.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./entity_view.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./entity_visitor.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./entity_visitor_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./handle_type_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./ics_editor.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./not_connected_error.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./property_id.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./query.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./query_error.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./query_state.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./residue_base.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./residue_handle.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./residue_prop.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./residue_view.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./sec_structure.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./spatial_organizer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./surface.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./surface_builder.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./builder.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./surface_handle.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./surface_prop.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./torsion_handle.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./transfer_connectivity.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./query_view_wrapper.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./view_op.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./view_type_fw.hh
-- Up-to-date: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./view_op.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./xcs_editor.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./bounding_box.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./transform.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/./module_config.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/_ost_mol.so
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/_ost_mol.so" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/./__init__.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/./__init__.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/bin/lddt
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/bin/lddt" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_mol_alg.so.2.9.0
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_mol_alg.so.2.9
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_mol_alg.so.2.9.0" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_mol_alg.so
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./svd_superpose.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./module_config.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./sec_structure_segments.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./local_dist_diff_test.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./distance_test_common.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./distance_rmsd_test.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./superpose_frames.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./filter_clashes.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./construct_cbeta.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./clash_score.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./trajectory_analysis.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./structure_analysis.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./consistency_checks.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./pdbize.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./adjacency_bitmap.hh
-- Up-to-date: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./consistency_checks.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./contact_overlap.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./domain_find.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./similarity_matrix.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./accessibility.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./sec_struct.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./nonstandard.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./molck.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./find_membrane.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./entity_to_density.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./biounit.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/alg/./gdt.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/atom_scattering_properties.txt
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/stereo_chemical_props.txt
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/_ost_mol_alg.so
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/_ost_mol_alg.so" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./__init__.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./views.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./superpose.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./qsscoring.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./trajectory_analysis.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./structure_analysis.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./helix_kinks.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./hbond.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./lddt.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./qsscore.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./scoring.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./chain_mapping.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./stereochemistry.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./dockq.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./contact_score.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./ligand_scoring.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./ligand_scoring_base.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./ligand_scoring_scrmsd.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./ligand_scoring_lddtpli.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./bb_lddt.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./__init__.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./views.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./superpose.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./qsscoring.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./trajectory_analysis.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./structure_analysis.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./helix_kinks.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./hbond.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./lddt.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./qsscore.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./scoring.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./chain_mapping.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./stereochemistry.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./dockq.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./contact_score.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./ligand_scoring.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./ligand_scoring_base.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./ligand_scoring_scrmsd.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./ligand_scoring_lddtpli.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/alg/./bb_lddt.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/stereo_data.json
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_mol_mm.so.2.9.0
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_mol_mm.so.2.9
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_mol_mm.so.2.9.0" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_mol_mm.so
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/mm/./forcefield.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/mm/./ff_reader.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/mm/./buildingblock.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/mm/./block_modifiers.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/mm/./gromacs_block_modifiers.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/mm/./heuristic_block_modifiers.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/mm/./interaction.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/mm/./settings.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/mm/./simulation.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/mm/./modeller.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/mm/./observer.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/mm/./state_extractor.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/mm/./system_creator.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/mm/./topology_creator.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/mm/./index.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/mm/./topology.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/mol/mm/./steep.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/forcefields/AMBER03.dat
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/forcefields/CHARMM27.dat
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/mm/_ost_mol_mm.so
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/mm/_ost_mol_mm.so" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/mm/./__init__.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/mm/./antechamber.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/mm/./__init__.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/mol/mm/./antechamber.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_seq.so.2.9.0
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_seq.so.2.9
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_seq.so.2.9.0" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_seq.so
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/impl/sequence_impl.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/impl/sequence_impl_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/impl/sequence_list_impl_fw.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/impl/sequence_list_impl.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/impl/sequence_list_iterator.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/./sequence_list.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/./sequence_handle.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/./alignment_handle.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/./module_config.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/./sequence_op.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/./aligned_region.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/./aligned_column.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/./aligned_column_iterator.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/./invalid_sequence.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/./views_from_sequences.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/./profile_handle.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/seq/_ost_seq.so
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/seq/_ost_seq.so" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/seq/./__init__.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/seq/./__init__.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_seq_alg.so.2.9.0
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_seq_alg.so.2.9
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_seq_alg.so.2.9.0" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/libost_seq_alg.so
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./alignment_opts.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./clip_alignment.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./conservation.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./contact_prediction_score.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./contact_weight_matrix.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./distance_map.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./entropy.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./global_align.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./ins_del.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./local_align.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./merge_pairwise_alignments.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./module_config.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./pair_subst_weight_matrix.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./semiglobal_align.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./sequence_identity.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./sequence_similarity.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./subst_weight_matrix.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./variance_map.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./default_contact_weight_matrix.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./default_pair_subst_weight_matrix.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./hmm_pseudo_counts.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./hmm_score.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/include/ost/seq/alg/./wrap_parasail.hh
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/seq/alg/_ost_seq_alg.so
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/seq/alg/_ost_seq_alg.so" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/seq/alg/./__init__.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/seq/alg/./mat.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/seq/alg/./renumber.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/seq/alg/./aaindex.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/seq/alg/./__init__.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/seq/alg/./mat.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/seq/alg/./renumber.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/seq/alg/./aaindex.pyc
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/aaindex/aaindex1
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/aaindex/aaindex2
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/share/openstructure/aaindex/aaindex3
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/openstructure/libexec/ost_config
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/bin/ost
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/bin/dng
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/ost_startup.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/python3.12/dist-packages/ost/dng_startup.py
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/bin/molck
-- Set non-toolchain portion of runtime path of "/build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/bin/molck" to ""
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/openstructure/libexec/ost-compare-ligand-structures
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/openstructure/libexec/ost-compare-structures
-- Installing: /build/reproducible-path/openstructure-2.9.0/debian/tmp/usr/lib/openstructure/libexec/ost-compare-structures-legacy
make[2]: Leaving directory '/build/reproducible-path/openstructure-2.9.0/obj-x86_64-linux-gnu'
find debian/tmp/usr/lib -name '*.pyc' | xargs --no-run-if-empty rm
make[1]: Leaving directory '/build/reproducible-path/openstructure-2.9.0'
   debian/rules override_dh_install
make[1]: Entering directory '/build/reproducible-path/openstructure-2.9.0'
dh_install
find debian/python3-ost/usr/lib/python3/dist-packages -type f \
	| xargs --no-run-if-empty chmod -x
find debian/tmp/usr/lib -name 'libost_*.so.*' \
	| while read LIB; \
		do dh_install -p$(echo $LIB | cut -d / -f 5 | cut -d . -f 1 | sed 's/_/-/g')2.9 \
			$LIB usr/lib/x86_64-linux-gnu; \
		done
find debian/tmp/usr/lib -name 'libost_*.so' \
	| while read LIB; \
		do dh_install -p$(echo $LIB | cut -d / -f 5 | cut -d . -f 1 | sed 's/_/-/g')-dev \
			$LIB usr/lib/x86_64-linux-gnu; \
		done
make[1]: Leaving directory '/build/reproducible-path/openstructure-2.9.0'
   dh_installdocs
   dh_installchangelogs
   dh_python3
I: dh_python3 fs:421: renaming _ost_base.so to _ost_base.cpython-312-x86_64-linux-gnu.so
I: dh_python3 fs:421: renaming _ost_io.so to _ost_io.cpython-312-x86_64-linux-gnu.so
I: dh_python3 fs:421: renaming _ost_geom.so to _ost_geom.cpython-312-x86_64-linux-gnu.so
I: dh_python3 fs:421: renaming _ost_conop.so to _ost_conop.cpython-312-x86_64-linux-gnu.so
I: dh_python3 fs:421: renaming _ost_info.so to _ost_info.cpython-312-x86_64-linux-gnu.so
I: dh_python3 fs:421: renaming _ost_db.so to _ost_db.cpython-312-x86_64-linux-gnu.so
I: dh_python3 fs:421: renaming _ost_img.so to _ost_img.cpython-312-x86_64-linux-gnu.so
I: dh_python3 fs:421: renaming _ost_img_alg.so to _ost_img_alg.cpython-312-x86_64-linux-gnu.so
I: dh_python3 fs:421: renaming _ost_gui.so to _ost_gui.cpython-312-x86_64-linux-gnu.so
I: dh_python3 fs:421: renaming _ost_bindings.so to _ost_bindings.cpython-312-x86_64-linux-gnu.so
I: dh_python3 fs:421: renaming _ost_mol.so to _ost_mol.cpython-312-x86_64-linux-gnu.so
I: dh_python3 fs:421: renaming _ost_mol_alg.so to _ost_mol_alg.cpython-312-x86_64-linux-gnu.so
I: dh_python3 fs:421: renaming _ost_mol_mm.so to _ost_mol_mm.cpython-312-x86_64-linux-gnu.so
I: dh_python3 fs:421: renaming _ost_gfx.so to _ost_gfx.cpython-312-x86_64-linux-gnu.so
I: dh_python3 fs:421: renaming _ost_seq.so to _ost_seq.cpython-312-x86_64-linux-gnu.so
I: dh_python3 fs:421: renaming _ost_seq_alg.so to _ost_seq_alg.cpython-312-x86_64-linux-gnu.so
   dh_perl
   dh_link
   dh_strip_nondeterminism
   dh_compress
   dh_fixperms
   dh_missing
   dh_dwz -a
   dh_strip -a
   dh_makeshlibs -a
   dh_shlibdeps -a
   dh_installdeb
   dh_gencontrol
dpkg-gencontrol: warning: Provides field of package python3-ost: substitution variable ${python3:Provides} used, but is not defined
dpkg-gencontrol: warning: Provides field of package python3-ost: substitution variable ${python3:Provides} used, but is not defined
   dh_md5sums
   dh_builddeb
dpkg-deb: building package 'libost-bindings2.9-dbgsym' in '../libost-bindings2.9-dbgsym_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-geom2.9-dbgsym' in '../libost-geom2.9-dbgsym_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-base2.9' in '../libost-base2.9_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-gui2.9' in '../libost-gui2.9_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-mol2.9-dbgsym' in '../libost-mol2.9-dbgsym_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-seq2.9' in '../libost-seq2.9_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-mol-mm2.9' in '../libost-mol-mm2.9_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-db2.9' in '../libost-db2.9_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-base-dev' in '../libost-base-dev_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-seq-dev' in '../libost-seq-dev_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'openstructure-dbgsym' in '../openstructure-dbgsym_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-db-dev' in '../libost-db-dev_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-img-alg2.9-dbgsym' in '../libost-img-alg2.9-dbgsym_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-io2.9-dbgsym' in '../libost-io2.9-dbgsym_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-mol-mm-dev' in '../libost-mol-mm-dev_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-info-dev' in '../libost-info-dev_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-info2.9' in '../libost-info2.9_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-gui-dev' in '../libost-gui-dev_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-bindings-dev' in '../libost-bindings-dev_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-mol-dev' in '../libost-mol-dev_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-geom-dev' in '../libost-geom-dev_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-io-dev' in '../libost-io-dev_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-db2.9-dbgsym' in '../libost-db2.9-dbgsym_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-conop-dev' in '../libost-conop-dev_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-base2.9-dbgsym' in '../libost-base2.9-dbgsym_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-seq2.9-dbgsym' in '../libost-seq2.9-dbgsym_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-img-alg-dev' in '../libost-img-alg-dev_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-gfx-dev' in '../libost-gfx-dev_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-seq-alg-dev' in '../libost-seq-alg-dev_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-bindings2.9' in '../libost-bindings2.9_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-img-dev' in '../libost-img-dev_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-mol-alg-dev' in '../libost-mol-alg-dev_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-info2.9-dbgsym' in '../libost-info2.9-dbgsym_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-geom2.9' in '../libost-geom2.9_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-gfx2.9' in '../libost-gfx2.9_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-mol-mm2.9-dbgsym' in '../libost-mol-mm2.9-dbgsym_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'openstructure' in '../openstructure_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-conop2.9' in '../libost-conop2.9_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-img2.9' in '../libost-img2.9_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'python3-ost' in '../python3-ost_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-img2.9-dbgsym' in '../libost-img2.9-dbgsym_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-gui2.9-dbgsym' in '../libost-gui2.9-dbgsym_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-conop2.9-dbgsym' in '../libost-conop2.9-dbgsym_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-gfx2.9-dbgsym' in '../libost-gfx2.9-dbgsym_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-io2.9' in '../libost-io2.9_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-mol2.9' in '../libost-mol2.9_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-seq-alg2.9' in '../libost-seq-alg2.9_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-seq-alg2.9-dbgsym' in '../libost-seq-alg2.9-dbgsym_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-mol-alg2.9' in '../libost-mol-alg2.9_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-mol-alg2.9-dbgsym' in '../libost-mol-alg2.9-dbgsym_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'python3-ost-dbgsym' in '../python3-ost-dbgsym_2.9.0-1~exp1_amd64.deb'.
dpkg-deb: building package 'libost-img-alg2.9' in '../libost-img-alg2.9_2.9.0-1~exp1_amd64.deb'.
 dpkg-genbuildinfo --build=binary -O../openstructure_2.9.0-1~exp1_amd64.buildinfo
 dpkg-genchanges --build=binary -O../openstructure_2.9.0-1~exp1_amd64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env 
I: removing directory /srv/workspace/pbuilder/3745438 and its subdirectories
I: Current time: Tue Nov 26 03:00:54 -12 2024
I: pbuilder-time-stamp: 1732633254